Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24827.t1 | XP_013458415.1 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1237.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24827.t1 | Q94BY4 | 69.5 | 637 | 162 | 5 | 10 | 618 | 9 | 641 | 6.4e-252 | 871.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24827.t1 | A0A072USY2 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1237.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene24827 | 0.820894 | 5.39E-53 | -1.69E-46 |
| MS.gene050213 | MS.gene24827 | 0.810681 | 1.02E-50 | -1.69E-46 |
| MS.gene050224 | MS.gene24827 | 0.811575 | 6.54E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene24827 | 0.848024 | 7.98E-60 | -1.69E-46 |
| MS.gene050414 | MS.gene24827 | 0.820389 | 7.04E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene24827 | 0.805478 | 1.31E-49 | -1.69E-46 |
| MS.gene051226 | MS.gene24827 | 0.810088 | 1.37E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene24827 | 0.960886 | 4.57E-119 | -1.69E-46 |
| MS.gene052016 | MS.gene24827 | 0.81659 | 5.11E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene24827 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene24827 | 0.837845 | 4.09E-57 | -1.69E-46 |
| MS.gene053143 | MS.gene24827 | 0.841387 | 4.90E-58 | -1.69E-46 |
| MS.gene054585 | MS.gene24827 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene054617 | MS.gene24827 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene24827 | 0.837096 | 6.36E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene24827 | 0.834898 | 2.30E-56 | -1.69E-46 |
| MS.gene057093 | MS.gene24827 | 0.82377 | 1.16E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68863 | MS.gene24827 | PPI |
| MS.gene68984 | MS.gene24827 | PPI |
| MS.gene24827 | MS.gene012669 | PPI |
| MS.gene24827 | MS.gene042158 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24827.t1 | MTR_4g125460 | 98.716 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1290 |
| MS.gene24827.t1 | MTR_4g125460 | 99.156 | 474 | 4 | 0 | 150 | 623 | 11 | 484 | 0.0 | 988 |
| MS.gene24827.t1 | MTR_4g019210 | 49.363 | 628 | 290 | 7 | 1 | 617 | 11 | 621 | 0.0 | 623 |
| MS.gene24827.t1 | MTR_5g081690 | 58.373 | 418 | 174 | 0 | 201 | 618 | 94 | 511 | 0.0 | 555 |
| MS.gene24827.t1 | MTR_5g064620 | 47.706 | 436 | 206 | 8 | 201 | 620 | 85 | 514 | 7.04e-137 | 410 |
| MS.gene24827.t1 | MTR_3g096020 | 47.454 | 432 | 214 | 6 | 199 | 620 | 161 | 589 | 2.11e-136 | 411 |
| MS.gene24827.t1 | MTR_4g082310 | 48.232 | 396 | 198 | 5 | 228 | 618 | 97 | 490 | 5.21e-134 | 402 |
| MS.gene24827.t1 | MTR_5g042200 | 48.492 | 398 | 198 | 5 | 228 | 620 | 85 | 480 | 1.30e-133 | 400 |
| MS.gene24827.t1 | MTR_3g099480 | 47.073 | 427 | 213 | 6 | 201 | 617 | 114 | 537 | 6.42e-133 | 400 |
| MS.gene24827.t1 | MTR_4g110030 | 49.367 | 395 | 185 | 6 | 227 | 611 | 115 | 504 | 1.33e-130 | 394 |
| MS.gene24827.t1 | MTR_2g059350 | 49.235 | 392 | 190 | 5 | 227 | 611 | 114 | 503 | 2.30e-130 | 393 |
| MS.gene24827.t1 | MTR_6g016015 | 48.724 | 392 | 192 | 5 | 227 | 611 | 114 | 503 | 3.45e-130 | 392 |
| MS.gene24827.t1 | MTR_4g100810 | 38.876 | 427 | 237 | 11 | 201 | 618 | 79 | 490 | 6.59e-92 | 294 |
| MS.gene24827.t1 | MTR_3g115220 | 39.059 | 425 | 239 | 11 | 201 | 618 | 82 | 493 | 1.85e-88 | 286 |
| MS.gene24827.t1 | MTR_3g086570 | 36.384 | 448 | 248 | 12 | 195 | 617 | 112 | 547 | 2.03e-88 | 285 |
| MS.gene24827.t1 | MTR_5g099010 | 37.875 | 433 | 240 | 10 | 201 | 622 | 90 | 504 | 2.60e-87 | 283 |
| MS.gene24827.t1 | MTR_3g026650 | 36.706 | 425 | 253 | 7 | 200 | 617 | 141 | 556 | 7.23e-87 | 281 |
| MS.gene24827.t1 | MTR_1g031590 | 36.626 | 486 | 266 | 16 | 155 | 617 | 80 | 546 | 7.59e-86 | 278 |
| MS.gene24827.t1 | MTR_5g012770 | 37.963 | 432 | 235 | 11 | 195 | 618 | 89 | 495 | 1.37e-85 | 276 |
| MS.gene24827.t1 | MTR_4g084570 | 37.029 | 451 | 246 | 14 | 194 | 622 | 118 | 552 | 1.52e-84 | 275 |
| MS.gene24827.t1 | MTR_4g023030 | 36.279 | 430 | 254 | 8 | 197 | 617 | 198 | 616 | 5.17e-81 | 268 |
| MS.gene24827.t1 | MTR_3g005340 | 36.795 | 443 | 239 | 13 | 196 | 618 | 124 | 545 | 4.24e-79 | 261 |
| MS.gene24827.t1 | MTR_5g032100 | 34.632 | 462 | 249 | 11 | 196 | 618 | 55 | 502 | 8.43e-79 | 258 |
| MS.gene24827.t1 | MTR_3g100310 | 35.000 | 460 | 246 | 12 | 199 | 619 | 72 | 517 | 2.47e-76 | 253 |
| MS.gene24827.t1 | MTR_3g026650 | 37.822 | 349 | 208 | 5 | 200 | 541 | 141 | 487 | 6.57e-75 | 248 |
| MS.gene24827.t1 | MTR_1g102030 | 36.712 | 444 | 236 | 13 | 201 | 619 | 61 | 484 | 1.16e-74 | 248 |
| MS.gene24827.t1 | MTR_5g059260 | 36.879 | 423 | 237 | 12 | 216 | 617 | 146 | 559 | 1.08e-72 | 245 |
| MS.gene24827.t1 | MTR_4g010990 | 33.958 | 427 | 247 | 12 | 199 | 620 | 45 | 441 | 3.67e-64 | 218 |
| MS.gene24827.t1 | MTR_3g086570 | 37.267 | 322 | 175 | 8 | 195 | 492 | 112 | 430 | 6.90e-64 | 217 |
| MS.gene24827.t1 | MTR_2g016470 | 32.118 | 439 | 240 | 10 | 227 | 618 | 188 | 615 | 4.82e-63 | 219 |
| MS.gene24827.t1 | MTR_4g010990 | 33.508 | 382 | 220 | 11 | 243 | 620 | 1 | 352 | 9.36e-56 | 193 |
| MS.gene24827.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 38 | 494 | 2.11e-55 | 196 |
| MS.gene24827.t1 | MTR_1g101990 | 39.116 | 294 | 159 | 9 | 332 | 619 | 1 | 280 | 3.80e-55 | 190 |
| MS.gene24827.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 137 | 593 | 2.45e-54 | 195 |
| MS.gene24827.t1 | MTR_3g026650 | 37.548 | 261 | 155 | 4 | 200 | 454 | 141 | 399 | 6.94e-51 | 181 |
| MS.gene24827.t1 | MTR_3g092590 | 30.982 | 326 | 208 | 6 | 197 | 505 | 58 | 383 | 2.76e-38 | 149 |
| MS.gene24827.t1 | MTR_3g092590 | 30.675 | 326 | 209 | 6 | 197 | 505 | 58 | 383 | 4.59e-38 | 150 |
| MS.gene24827.t1 | MTR_7g017330 | 31.757 | 296 | 184 | 7 | 226 | 504 | 96 | 390 | 9.29e-37 | 146 |
| MS.gene24827.t1 | MTR_7g064210 | 43.023 | 172 | 79 | 5 | 345 | 503 | 25 | 190 | 9.82e-34 | 134 |
| MS.gene24827.t1 | MTR_1g007390 | 29.217 | 332 | 212 | 7 | 197 | 505 | 58 | 389 | 2.04e-31 | 130 |
| MS.gene24827.t1 | MTR_1g101985 | 46.078 | 102 | 55 | 0 | 201 | 302 | 61 | 162 | 1.47e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24827.t1 | AT5G35570 | 69.891 | 641 | 153 | 7 | 10 | 618 | 9 | 641 | 0.0 | 901 |
| MS.gene24827.t1 | AT2G37980 | 66.187 | 417 | 141 | 0 | 201 | 617 | 199 | 615 | 0.0 | 618 |
| MS.gene24827.t1 | AT3G54100 | 51.180 | 551 | 247 | 5 | 75 | 617 | 75 | 611 | 0.0 | 597 |
| MS.gene24827.t1 | AT5G01100 | 61.593 | 427 | 160 | 2 | 196 | 619 | 185 | 610 | 0.0 | 581 |
| MS.gene24827.t1 | AT1G14020 | 50.505 | 396 | 189 | 5 | 228 | 618 | 91 | 484 | 4.21e-139 | 415 |
| MS.gene24827.t1 | AT5G15740 | 50.513 | 390 | 184 | 5 | 229 | 611 | 107 | 494 | 1.60e-133 | 401 |
| MS.gene24827.t1 | AT2G03280 | 48.974 | 390 | 192 | 5 | 228 | 611 | 88 | 476 | 6.75e-130 | 390 |
| MS.gene24827.t1 | AT1G22460 | 44.907 | 432 | 227 | 6 | 201 | 623 | 134 | 563 | 1.26e-128 | 390 |
| MS.gene24827.t1 | AT3G02250 | 48.724 | 392 | 192 | 5 | 227 | 611 | 105 | 494 | 3.21e-128 | 387 |
| MS.gene24827.t1 | AT5G64600 | 44.780 | 431 | 225 | 6 | 200 | 620 | 90 | 517 | 7.97e-126 | 381 |
| MS.gene24827.t1 | AT2G03280 | 45.803 | 417 | 192 | 6 | 228 | 611 | 88 | 503 | 7.97e-124 | 376 |
| MS.gene24827.t1 | AT5G63390 | 38.009 | 442 | 257 | 8 | 190 | 623 | 122 | 554 | 4.48e-93 | 298 |
| MS.gene24827.t1 | AT1G20550 | 37.923 | 443 | 244 | 12 | 186 | 618 | 69 | 490 | 1.87e-88 | 286 |
| MS.gene24827.t1 | AT3G26370 | 37.621 | 412 | 227 | 9 | 227 | 619 | 157 | 557 | 7.53e-88 | 284 |
| MS.gene24827.t1 | AT1G76270 | 38.283 | 431 | 237 | 12 | 199 | 618 | 75 | 487 | 1.41e-87 | 284 |
| MS.gene24827.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.47e-87 | 282 |
| MS.gene24827.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.47e-87 | 282 |
| MS.gene24827.t1 | AT4G38390 | 37.241 | 435 | 248 | 10 | 199 | 623 | 92 | 511 | 1.77e-86 | 280 |
| MS.gene24827.t1 | AT1G04910 | 36.703 | 455 | 246 | 12 | 174 | 618 | 53 | 475 | 5.24e-85 | 275 |
| MS.gene24827.t1 | AT2G44500 | 37.011 | 435 | 253 | 10 | 199 | 623 | 144 | 567 | 4.77e-84 | 275 |
| MS.gene24827.t1 | AT1G35510 | 33.929 | 560 | 317 | 15 | 79 | 618 | 31 | 557 | 2.92e-83 | 272 |
| MS.gene24827.t1 | AT1G14970 | 35.714 | 448 | 254 | 12 | 195 | 622 | 4 | 437 | 3.14e-82 | 266 |
| MS.gene24827.t1 | AT1G14970 | 37.440 | 414 | 229 | 10 | 228 | 622 | 9 | 411 | 3.75e-82 | 265 |
| MS.gene24827.t1 | AT3G07900 | 34.182 | 550 | 297 | 19 | 105 | 617 | 51 | 572 | 3.82e-82 | 270 |
| MS.gene24827.t1 | AT5G65470 | 35.637 | 463 | 243 | 13 | 196 | 617 | 54 | 502 | 1.28e-81 | 266 |
| MS.gene24827.t1 | AT4G24530 | 35.217 | 460 | 247 | 11 | 198 | 619 | 72 | 518 | 2.75e-81 | 266 |
| MS.gene24827.t1 | AT1G14970 | 35.892 | 443 | 250 | 12 | 200 | 622 | 129 | 557 | 2.35e-80 | 265 |
| MS.gene24827.t1 | AT1G38065 | 36.721 | 433 | 243 | 13 | 206 | 617 | 6 | 428 | 2.40e-80 | 261 |
| MS.gene24827.t1 | AT1G38065 | 37.046 | 413 | 231 | 11 | 226 | 617 | 34 | 438 | 3.78e-80 | 261 |
| MS.gene24827.t1 | AT1G38131 | 36.042 | 480 | 261 | 17 | 170 | 617 | 92 | 557 | 3.22e-79 | 262 |
| MS.gene24827.t1 | AT2G01480 | 37.108 | 415 | 231 | 10 | 227 | 622 | 153 | 556 | 2.45e-78 | 259 |
| MS.gene24827.t1 | AT2G01480 | 39.394 | 363 | 198 | 8 | 227 | 570 | 153 | 512 | 1.31e-73 | 246 |
| MS.gene24827.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.49e-63 | 217 |
| MS.gene24827.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.49e-63 | 217 |
| MS.gene24827.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 160 | 610 | 2.75e-62 | 217 |
| MS.gene24827.t1 | AT1G62330 | 30.480 | 479 | 264 | 13 | 193 | 617 | 186 | 649 | 7.10e-62 | 217 |
| MS.gene24827.t1 | AT1G11990 | 32.579 | 442 | 257 | 13 | 201 | 617 | 163 | 588 | 1.95e-60 | 212 |
| MS.gene24827.t1 | AT1G52630 | 35.027 | 374 | 229 | 10 | 200 | 570 | 45 | 407 | 1.43e-59 | 206 |
| MS.gene24827.t1 | AT1G29200 | 32.870 | 432 | 232 | 11 | 233 | 618 | 1 | 420 | 2.68e-58 | 202 |
| MS.gene24827.t1 | AT1G11990 | 29.352 | 494 | 271 | 14 | 186 | 617 | 133 | 610 | 5.81e-54 | 194 |
| MS.gene24827.t1 | AT2G44500 | 39.098 | 266 | 149 | 7 | 199 | 455 | 144 | 405 | 6.36e-50 | 179 |
| MS.gene24827.t1 | AT1G52630 | 33.939 | 330 | 205 | 9 | 243 | 570 | 1 | 319 | 7.49e-50 | 177 |
| MS.gene24827.t1 | AT3G26370 | 40.367 | 218 | 118 | 3 | 227 | 434 | 157 | 372 | 4.51e-48 | 173 |
| MS.gene24827.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 4.14e-38 | 150 |
| MS.gene24827.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 4.14e-38 | 150 |
| MS.gene24827.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.40e-37 | 147 |
| MS.gene24827.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.40e-37 | 147 |
Find 146 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTGCCCTTCATTTA+AGG | 0.061402 | 8.4:-9436576 | MS.gene24827:intron |
| CTTAGTTTCTGTATGGATTT+TGG | 0.094858 | 8.4:+9436691 | None:intergenic |
| GAATCCATTGCTGTAGATTT+TGG | 0.128439 | 8.4:-9439559 | MS.gene24827:CDS |
| TTGTGGGGTTTGTTTGTTTA+TGG | 0.153331 | 8.4:-9439491 | MS.gene24827:CDS |
| TCAGCTCCAGTTGAAGAATT+TGG | 0.157549 | 8.4:-9436637 | MS.gene24827:CDS |
| ATATATTTGTAGTGGCTTTA+AGG | 0.177091 | 8.4:-9437166 | MS.gene24827:intron |
| AGATCACTTTGTGCTGATTT+AGG | 0.226086 | 8.4:+9436755 | None:intergenic |
| TGTGGGGTTTGTTTGTTTAT+GGG | 0.262109 | 8.4:-9439490 | MS.gene24827:CDS |
| GAAGTTTCCCTCGGAGTTAA+TGG | 0.272926 | 8.4:+9436280 | None:intergenic |
| CTCTAACACTTCTTCCGATC+TGG | 0.279645 | 8.4:+9439672 | None:intergenic |
| TTACACTTACGATGGAAATA+TGG | 0.280890 | 8.4:-9436035 | MS.gene24827:CDS |
| TTATTACTTGTCTGGATTGA+TGG | 0.287803 | 8.4:+9435967 | None:intergenic |
| AAAGATATGCTTGCATTTAC+TGG | 0.303129 | 8.4:-9436421 | MS.gene24827:CDS |
| GCCTAAATCAGATGAGATTT+GGG | 0.307013 | 8.4:-9437789 | MS.gene24827:CDS |
| GTTACCTTGGACCAAGATAT+TGG | 0.310172 | 8.4:+9437039 | None:intergenic |
| TAAAAGCTTTCTTCTAGCTT+TGG | 0.313521 | 8.4:+9435685 | None:intergenic |
| TATATTCTTGTAAATGCTAA+TGG | 0.320383 | 8.4:-9437814 | MS.gene24827:CDS |
| GGCCTAAATCAGATGAGATT+TGG | 0.323892 | 8.4:-9437790 | MS.gene24827:CDS |
| TGGACGAAGGAAACATTTCT+TGG | 0.328674 | 8.4:-9435786 | MS.gene24827:CDS |
| ATGCATAACCAAGGGATCTT+TGG | 0.337730 | 8.4:+9438220 | None:intergenic |
| GCTCACGACGGCGGCGGCGC+TGG | 0.338442 | 8.4:+9439744 | None:intergenic |
| TTATGAATTTATTACTTGTC+TGG | 0.340259 | 8.4:+9435959 | None:intergenic |
| AGAACCTCTGTCTTGTAATA+AGG | 0.342668 | 8.4:+9436784 | None:intergenic |
| CCCCAAATCTCATCTGATTT+AGG | 0.364358 | 8.4:+9437788 | None:intergenic |
| CATGTTTCTCAGAGAGTTCA+TGG | 0.366893 | 8.4:-9439616 | MS.gene24827:CDS |
| ATATTCTTGTAAATGCTAAT+GGG | 0.370728 | 8.4:-9437813 | MS.gene24827:CDS |
| TTGTTTCCAAATTCTTCAAC+TGG | 0.375807 | 8.4:+9436631 | None:intergenic |
| CTCTTGATCATACCTCGTAC+TGG | 0.377344 | 8.4:-9437627 | MS.gene24827:CDS |
| GTTCTTAAGATTTGTGCTAC+TGG | 0.378409 | 8.4:-9439466 | MS.gene24827:CDS |
| GCTGGCGTTGTTGCGTTTGA+AGG | 0.378895 | 8.4:+9439762 | None:intergenic |
| ATTTCACTCATACTGATTCC+CGG | 0.381505 | 8.4:-9436732 | MS.gene24827:CDS |
| GCCGCCGCTCACGACGGCGG+CGG | 0.391770 | 8.4:+9439738 | None:intergenic |
| ATTTGTGCTACTGGTTGGCT+TGG | 0.404875 | 8.4:-9439457 | MS.gene24827:CDS |
| ACGGCATCTTAGTTTCTGTA+TGG | 0.405367 | 8.4:+9436684 | None:intergenic |
| GATCCCTTGGTTATGCATAT+AGG | 0.412263 | 8.4:-9438215 | MS.gene24827:CDS |
| TTGATGCCAGATATGTGATA+TGG | 0.414143 | 8.4:-9437692 | MS.gene24827:intron |
| GATGTATTTGTGAAACAAAA+AGG | 0.414230 | 8.4:-9435645 | MS.gene24827:CDS |
| TGAAGAATTTGGAAACAAAC+TGG | 0.414484 | 8.4:-9436626 | MS.gene24827:CDS |
| GAGGAATGAGAGAAAATGTT+GGG | 0.415495 | 8.4:+9436154 | None:intergenic |
| CAAAGGCTGTACAAGGTCAT+AGG | 0.418033 | 8.4:-9436012 | MS.gene24827:CDS |
| TCTCCCGACTCTCTTAGATA+TGG | 0.420573 | 8.4:+9435712 | None:intergenic |
| AGCGCCGCCGCCGTCGTGAG+CGG | 0.421522 | 8.4:-9439742 | MS.gene24827:CDS |
| GCCGCCGCCGTCGTGAGCGG+CGG | 0.429371 | 8.4:-9439739 | MS.gene24827:CDS |
| CTTAAATGAAGGGCAAGATA+AGG | 0.435686 | 8.4:+9436577 | None:intergenic |
| TGATGACCATGCTTCGAAAC+AGG | 0.444891 | 8.4:+9439649 | None:intergenic |
| TTATTCAGGAATCAGAAGTC+TGG | 0.451320 | 8.4:-9438015 | MS.gene24827:intron |
| ACTCTAAAGACGGTAGAAAC+AGG | 0.453735 | 8.4:-9438168 | MS.gene24827:CDS |
| AGTTCATGGTGGAGTTGTGA+AGG | 0.456224 | 8.4:-9439602 | MS.gene24827:CDS |
| GTGGTAATGTCTCTACTATA+TGG | 0.459710 | 8.4:+9437097 | None:intergenic |
| AACTCCATCGGAATTTGATT+CGG | 0.464402 | 8.4:+9439840 | None:intergenic |
| TTAAGATTTGTGCTACTGGT+TGG | 0.473916 | 8.4:-9439462 | MS.gene24827:CDS |
| ACCAAGTGCTCTAAGTAGTA+AGG | 0.476802 | 8.4:+9436258 | None:intergenic |
| AGAGGAATGAGAGAAAATGT+TGG | 0.478418 | 8.4:+9436153 | None:intergenic |
| ATTTAGATTATCAATTCCAT+TGG | 0.478712 | 8.4:+9438251 | None:intergenic |
| TGCGCCGCCGCTCACGACGG+CGG | 0.479810 | 8.4:+9439735 | None:intergenic |
| TCTAACACTTCTTCCGATCT+GGG | 0.482101 | 8.4:+9439673 | None:intergenic |
| TCCTTACTACTTAGAGCACT+TGG | 0.482113 | 8.4:-9436259 | MS.gene24827:CDS |
| TTCTAGAGAGATCGATACAT+TGG | 0.484943 | 8.4:+9437966 | None:intergenic |
| GTCAACAGTCCACGTTTCTC+CGG | 0.492159 | 8.4:-9439808 | MS.gene24827:CDS |
| ACCAGGATTTACCTCGTAGC+TGG | 0.496065 | 8.4:-9436223 | MS.gene24827:CDS |
| GACTGAGCACGGCGAGTCAT+CGG | 0.499416 | 8.4:+9439784 | None:intergenic |
| CACTTTGTGCTGATTTAGGA+GGG | 0.499730 | 8.4:+9436759 | None:intergenic |
| AATGCCATTGTTAGCAAGCC+GGG | 0.500019 | 8.4:+9436714 | None:intergenic |
| ATGTAACTTACCTTAAATGA+AGG | 0.501429 | 8.4:+9436566 | None:intergenic |
| AATCATCAAAACATGTTGGC+TGG | 0.502313 | 8.4:-9436097 | MS.gene24827:CDS |
| TGTTAAACTTGTTGATCAGT+TGG | 0.504716 | 8.4:-9435806 | MS.gene24827:CDS |
| CTCGTAGCTGGAGAAGCATA+TGG | 0.507275 | 8.4:-9436211 | MS.gene24827:CDS |
| TCCAGCTACGAGGTAAATCC+TGG | 0.509294 | 8.4:+9436222 | None:intergenic |
| GCTGGAGAAGCATATGGAAG+AGG | 0.516557 | 8.4:-9436205 | MS.gene24827:CDS |
| GCTCCATATCTAAGAGAGTC+GGG | 0.517325 | 8.4:-9435715 | MS.gene24827:CDS |
| ACATTACCACCTACCTATGC+TGG | 0.518139 | 8.4:-9437084 | MS.gene24827:CDS |
| TCTAGAGAGATCGATACATT+GGG | 0.518334 | 8.4:+9437967 | None:intergenic |
| TTAGAGCCTGTTTCGAAGCA+TGG | 0.520711 | 8.4:-9439655 | MS.gene24827:CDS |
| GCTTTAAGGATTTGTTTGAC+TGG | 0.524080 | 8.4:-9437152 | MS.gene24827:CDS |
| TGCGATATGAAGTTGGTCAC+TGG | 0.528729 | 8.4:-9436351 | MS.gene24827:CDS |
| GAATGCCATTGTTAGCAAGC+CGG | 0.531220 | 8.4:+9436713 | None:intergenic |
| CAAGAATCATCAAAACATGT+TGG | 0.532621 | 8.4:-9436101 | MS.gene24827:CDS |
| TCACTTTGTGCTGATTTAGG+AGG | 0.533556 | 8.4:+9436758 | None:intergenic |
| CTAGTGGACCAAAGATCCCT+TGG | 0.537712 | 8.4:-9438228 | MS.gene24827:CDS |
| AAGAGATTAATGGGACTGAA+AGG | 0.537759 | 8.4:-9436321 | MS.gene24827:CDS |
| AAATCCAAAATCTACAGCAA+TGG | 0.538935 | 8.4:+9439555 | None:intergenic |
| AAGAAATACGTCACTCTGAA+GGG | 0.538954 | 8.4:+9436057 | None:intergenic |
| TTTGTTTCACAAATACATCC+TGG | 0.544979 | 8.4:+9435649 | None:intergenic |
| TCTTGATCATACCTCGTACT+GGG | 0.547240 | 8.4:-9437626 | MS.gene24827:CDS |
| GTTCATGGTGGAGTTGTGAA+GGG | 0.550601 | 8.4:-9439601 | MS.gene24827:CDS |
| TATTCTTGTAAATGCTAATG+GGG | 0.555729 | 8.4:-9437812 | MS.gene24827:CDS |
| AAAGAAATACGTCACTCTGA+AGG | 0.556265 | 8.4:+9436056 | None:intergenic |
| GAGTGCGCCGCCGCTCACGA+CGG | 0.556672 | 8.4:+9439732 | None:intergenic |
| GACTCGCTGTGAAACTCCAT+CGG | 0.558940 | 8.4:+9439828 | None:intergenic |
| AGGCAGATGCGATATGAAGT+TGG | 0.559121 | 8.4:-9436358 | MS.gene24827:CDS |
| AACTCCAATATCTTGGTCCA+AGG | 0.559526 | 8.4:-9437043 | MS.gene24827:intron |
| AATTGATAATCTAAATCTAG+TGG | 0.566115 | 8.4:-9438244 | MS.gene24827:CDS |
| TGCGTTTGAAGGACTGAGCA+CGG | 0.566234 | 8.4:+9439773 | None:intergenic |
| GCAAATCAACTCACCCAGAT+CGG | 0.567377 | 8.4:-9439686 | MS.gene24827:CDS |
| GTATCTAGAATGCAGCAGAA+TGG | 0.567600 | 8.4:-9436604 | MS.gene24827:CDS |
| GTATTTCTTTACACTTACGA+TGG | 0.568480 | 8.4:-9436043 | MS.gene24827:CDS |
| AATATGGCAAAGGCTGTACA+AGG | 0.568533 | 8.4:-9436019 | MS.gene24827:CDS |
| TGTAACTTACCTTAAATGAA+GGG | 0.580244 | 8.4:+9436567 | None:intergenic |
| AGGTAAATCCTGGTGTGTGA+TGG | 0.580546 | 8.4:+9436232 | None:intergenic |
| TGCTCCATATCTAAGAGAGT+CGG | 0.582757 | 8.4:-9435716 | MS.gene24827:CDS |
| ACTGAAAGGAGATTGCTTGG+TGG | 0.582839 | 8.4:-9436307 | MS.gene24827:CDS |
| GGGACTGAAAGGAGATTGCT+TGG | 0.582857 | 8.4:-9436310 | MS.gene24827:CDS |
| TGCTGTTGCTAAGATTATGA+AGG | 0.586237 | 8.4:-9437668 | MS.gene24827:CDS |
| CAGGAACTATCTGACTCCAA+TGG | 0.586261 | 8.4:-9438267 | MS.gene24827:CDS |
| CCTCGTACTGGGCTGATCAG+AGG | 0.593327 | 8.4:-9437615 | MS.gene24827:intron |
| TCACAAATACATCCTGGCAG+AGG | 0.595231 | 8.4:+9435655 | None:intergenic |
| ACGGTAGAAACAGGAGTAGG+TGG | 0.604533 | 8.4:-9438159 | MS.gene24827:CDS |
| CTTGTTGATCAGTTGGACGA+AGG | 0.609235 | 8.4:-9435799 | MS.gene24827:CDS |
| TATGCATATAGGAGTCAAGA+AGG | 0.609346 | 8.4:-9438204 | MS.gene24827:CDS |
| ATTTACAAGAATATATCCGT+TGG | 0.609999 | 8.4:+9437822 | None:intergenic |
| GAGTTCTCACTTTAGCAGTG+TGG | 0.611281 | 8.4:+9438133 | None:intergenic |
| TACGAGGTATGATCAAGAGA+AGG | 0.612224 | 8.4:+9437631 | None:intergenic |
| GAACGGCTGAATTCCAGCAT+AGG | 0.612438 | 8.4:+9437071 | None:intergenic |
| TAGGAGTCAAGAAGGAGATG+TGG | 0.612654 | 8.4:-9438196 | MS.gene24827:CDS |
| CATGAACTCTCTGAGAAACA+TGG | 0.613005 | 8.4:+9439617 | None:intergenic |
| TTCTCCGAATCAAATTCCGA+TGG | 0.615595 | 8.4:-9439844 | MS.gene24827:CDS |
| ATATGAAGTTGGTCACTGGA+AGG | 0.616768 | 8.4:-9436347 | MS.gene24827:CDS |
| AGGAATGAGAGAAAATGTTG+GGG | 0.617224 | 8.4:+9436155 | None:intergenic |
| AGTAGTAAGGAAGTTTCCCT+CGG | 0.625299 | 8.4:+9436271 | None:intergenic |
| TGGCTGTCCATTAACTCCGA+GGG | 0.625425 | 8.4:-9436287 | MS.gene24827:CDS |
| TTAGATATGGAGCACCGTCA+CGG | 0.628621 | 8.4:+9435725 | None:intergenic |
| GACTCCTATATGCATAACCA+AGG | 0.629127 | 8.4:+9438211 | None:intergenic |
| ACTTTGTGCTGATTTAGGAG+GGG | 0.633477 | 8.4:+9436760 | None:intergenic |
| GATTCCCGGCTTGCTAACAA+TGG | 0.643017 | 8.4:-9436718 | MS.gene24827:CDS |
| TCTACAGCAATGGATTCAAG+TGG | 0.648308 | 8.4:+9439565 | None:intergenic |
| TCAATGCTCTGTAGTTTACA+CGG | 0.649185 | 8.4:+9436665 | None:intergenic |
| AGCACGGCGAGTCATCGGAC+CGG | 0.656467 | 8.4:+9439789 | None:intergenic |
| GGTTCCTTATTACAAGACAG+AGG | 0.658750 | 8.4:-9436788 | MS.gene24827:CDS |
| CTCATCTTCAGAAGACAGAG+AGG | 0.659368 | 8.4:+9436135 | None:intergenic |
| GTCATCGGACCGGAGAAACG+TGG | 0.662543 | 8.4:+9439799 | None:intergenic |
| CCTCTGATCAGCCCAGTACG+AGG | 0.668444 | 8.4:+9437615 | None:intergenic |
| TGAATTCCAGCATAGGTAGG+TGG | 0.669854 | 8.4:+9437078 | None:intergenic |
| ACTCCTATATGCATAACCAA+GGG | 0.670117 | 8.4:+9438212 | None:intergenic |
| TTACGATGGAAATATGGCAA+AGG | 0.670267 | 8.4:-9436029 | MS.gene24827:CDS |
| GTGCTAGATGCAAAGACCAA+CGG | 0.675801 | 8.4:-9437838 | MS.gene24827:CDS |
| GTGGCTGTCCATTAACTCCG+AGG | 0.677303 | 8.4:-9436288 | MS.gene24827:CDS |
| AAGACGGTAGAAACAGGAGT+AGG | 0.677819 | 8.4:-9438162 | MS.gene24827:CDS |
| AGGAAGTATGAAATATCTCG+AGG | 0.678236 | 8.4:-9436185 | MS.gene24827:CDS |
| GGCTGAATTCCAGCATAGGT+AGG | 0.679350 | 8.4:+9437075 | None:intergenic |
| ATTCTTGTAAATGCTAATGG+GGG | 0.683438 | 8.4:-9437811 | MS.gene24827:CDS |
| TGTGGAACGAACTCTAAAGA+CGG | 0.684864 | 8.4:-9438178 | MS.gene24827:CDS |
| CAGAAGAAGATGAAGAACTG+AGG | 0.686563 | 8.4:-9436378 | MS.gene24827:CDS |
| CCTAAATCAGATGAGATTTG+GGG | 0.710208 | 8.4:-9437788 | MS.gene24827:intron |
| CATATGCTTCTCCAGCTACG+AGG | 0.722282 | 8.4:+9436212 | None:intergenic |
| AAACTTCATAGAGACCGTGA+CGG | 0.726293 | 8.4:-9435739 | MS.gene24827:CDS |
| GTTTCTCAGAGAGTTCATGG+TGG | 0.759850 | 8.4:-9439613 | MS.gene24827:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTTACTTTTTATC+AGG | - | chr8.4:9437203-9437222 | MS.gene24827:intron | 10.0% |
| !! | AATTTATAGTGTTTATTTAC+AGG | - | chr8.4:9438680-9438699 | MS.gene24827:intron | 15.0% |
| !! | AGTAAAATAATTTACTTAGT+AGG | + | chr8.4:9437196-9437215 | None:intergenic | 15.0% |
| !! | TTTAACAATGTTTCAAATTA+CGG | - | chr8.4:9438651-9438670 | MS.gene24827:intron | 15.0% |
| !!! | AATTTGAAACATTGTTAAAA+GGG | + | chr8.4:9438650-9438669 | None:intergenic | 15.0% |
| !!! | TAATTTGAAACATTGTTAAA+AGG | + | chr8.4:9438651-9438670 | None:intergenic | 15.0% |
| !! | AAAAAATTATTGAAAGTGAG+TGG | + | chr8.4:9437626-9437645 | None:intergenic | 20.0% |
| !! | AAATCTTGTATCAACTAATA+TGG | + | chr8.4:9438005-9438024 | None:intergenic | 20.0% |
| !! | AATATTTAAGCACTTCAAAA+TGG | + | chr8.4:9436330-9436349 | None:intergenic | 20.0% |
| !! | AGAATTAGATAGATCATTAT+CGG | - | chr8.4:9436760-9436779 | MS.gene24827:CDS | 20.0% |
| !! | AGCTATCTTATTAGTTATAA+TGG | - | chr8.4:9436616-9436635 | MS.gene24827:CDS | 20.0% |
| !! | ATAACTAATAAGATAGCTAT+GGG | + | chr8.4:9436614-9436633 | None:intergenic | 20.0% |
| !! | ATATTCTTGTAAATGCTAAT+GGG | - | chr8.4:9437676-9437695 | MS.gene24827:CDS | 20.0% |
| !! | ATTTAGATTATCAATTCCAT+TGG | + | chr8.4:9437241-9437260 | None:intergenic | 20.0% |
| !! | CTATCTTATTAGTTATAATG+GGG | - | chr8.4:9436618-9436637 | MS.gene24827:CDS | 20.0% |
| !! | GCTATCTTATTAGTTATAAT+GGG | - | chr8.4:9436617-9436636 | MS.gene24827:CDS | 20.0% |
| !! | TATAACTAATAAGATAGCTA+TGG | + | chr8.4:9436615-9436634 | None:intergenic | 20.0% |
| !! | TATATTCTTGTAAATGCTAA+TGG | - | chr8.4:9437675-9437694 | MS.gene24827:CDS | 20.0% |
| !! | TCTGATGTTATATTATAAGA+AGG | - | chr8.4:9437739-9437758 | MS.gene24827:intron | 20.0% |
| !! | TTATGAATTTATTACTTGTC+TGG | + | chr8.4:9439533-9439552 | None:intergenic | 20.0% |
| !! | TTGTTTCAATATATTTGTAG+TGG | - | chr8.4:9438315-9438334 | MS.gene24827:intron | 20.0% |
| !!! | AATTGATAATCTAAATCTAG+TGG | - | chr8.4:9437245-9437264 | MS.gene24827:intron | 20.0% |
| !!! | AGAGTTCTGTTTTTTTTTTT+TGG | - | chr8.4:9436172-9436191 | MS.gene24827:CDS | 20.0% |
| !!! | GTTTTTGTTTTTGGATTTTA+TGG | - | chr8.4:9436282-9436301 | MS.gene24827:CDS | 20.0% |
| ! | AAACAAAAGAAAGTAATGCA+AGG | + | chr8.4:9437137-9437156 | None:intergenic | 25.0% |
| ! | AATGATGTTTATGACACATA+AGG | + | chr8.4:9438579-9438598 | None:intergenic | 25.0% |
| ! | ATAATACAATTGAATCCACA+TGG | - | chr8.4:9438959-9438978 | MS.gene24827:intron | 25.0% |
| ! | ATGTAACTTACCTTAAATGA+AGG | + | chr8.4:9438926-9438945 | None:intergenic | 25.0% |
| ! | ATGTTATATTATAAGAAGGC+AGG | - | chr8.4:9437743-9437762 | MS.gene24827:intron | 25.0% |
| ! | ATTGAAAATACGAAAACACT+TGG | + | chr8.4:9436982-9437001 | None:intergenic | 25.0% |
| ! | ATTTACAAGAATATATCCGT+TGG | + | chr8.4:9437670-9437689 | None:intergenic | 25.0% |
| ! | CAAATTGTGAAAATTCCAAA+TGG | - | chr8.4:9437042-9437061 | MS.gene24827:intron | 25.0% |
| ! | CATTGAAATCAGTTTATACT+GGG | + | chr8.4:9439642-9439661 | None:intergenic | 25.0% |
| ! | GATGTATTTGTGAAACAAAA+AGG | - | chr8.4:9439844-9439863 | MS.gene24827:CDS | 25.0% |
| ! | GTATATCCAAACAAACATTA+AGG | + | chr8.4:9436807-9436826 | None:intergenic | 25.0% |
| ! | GTCAAAAAAGCTAAATTTCT+AGG | + | chr8.4:9438097-9438116 | None:intergenic | 25.0% |
| ! | TAATCTATATCTCAAGTTTG+TGG | - | chr8.4:9437379-9437398 | MS.gene24827:intron | 25.0% |
| ! | TATTCTTGTAAATGCTAATG+GGG | - | chr8.4:9437677-9437696 | MS.gene24827:CDS | 25.0% |
| ! | TGTAACTTACCTTAAATGAA+GGG | + | chr8.4:9438925-9438944 | None:intergenic | 25.0% |
| !! | ATATATTTGTAGTGGCTTTA+AGG | - | chr8.4:9438323-9438342 | MS.gene24827:intron | 25.0% |
| !! | ATTGAATAAATTTTGAGCAC+AGG | + | chr8.4:9438481-9438500 | None:intergenic | 25.0% |
| !! | TAAATGGTATGTTCACATTT+TGG | + | chr8.4:9436716-9436735 | None:intergenic | 25.0% |
| !! | TTGCATTACTTTCTTTTGTT+TGG | - | chr8.4:9437136-9437155 | MS.gene24827:CDS | 25.0% |
| !! | TTTTGGATTTTATGGTGTTT+TGG | - | chr8.4:9436290-9436309 | MS.gene24827:CDS | 25.0% |
| !!! | AAGTTTGCTGTTTTTGTTTT+TGG | - | chr8.4:9436273-9436292 | MS.gene24827:CDS | 25.0% |
| !!! | ATAAGATTGAGCTTTTTCAA+TGG | + | chr8.4:9436063-9436082 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATGATTCTTGAA+AGG | + | chr8.4:9439386-9439405 | None:intergenic | 25.0% |
| !!! | ATTTGTTTGGTTTTCAATGT+AGG | - | chr8.4:9437407-9437426 | MS.gene24827:intron | 25.0% |
| !!! | CAAAGTTTGCTTTTTTATTC+AGG | - | chr8.4:9437460-9437479 | MS.gene24827:intron | 25.0% |
| !!! | CATTTGGAATTTTCACAATT+TGG | + | chr8.4:9437044-9437063 | None:intergenic | 25.0% |
| !!! | TGCATTACTTTCTTTTGTTT+GGG | - | chr8.4:9437137-9437156 | MS.gene24827:CDS | 25.0% |
| !!! | TGTGGAATTTTTTTTGACAT+TGG | + | chr8.4:9438613-9438632 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGTAATTAGTGTG+TGG | - | chr8.4:9436186-9436205 | MS.gene24827:CDS | 25.0% |
| AAAGATATGCTTGCATTTAC+TGG | - | chr8.4:9439068-9439087 | MS.gene24827:intron | 30.0% | |
| AAATCCAAAATCTACAGCAA+TGG | + | chr8.4:9435937-9435956 | None:intergenic | 30.0% | |
| AAATTATTGAAAGTGAGTGG+AGG | + | chr8.4:9437623-9437642 | None:intergenic | 30.0% | |
| AACAAAGAAGAGATAGAGTA+AGG | + | chr8.4:9439037-9439056 | None:intergenic | 30.0% | |
| AATTATTGAAAGTGAGTGGA+GGG | + | chr8.4:9437622-9437641 | None:intergenic | 30.0% | |
| ATTCTTGTAAATGCTAATGG+GGG | - | chr8.4:9437678-9437697 | MS.gene24827:CDS | 30.0% | |
| ATTGTATCTTACACTGCAAA+GGG | - | chr8.4:9436106-9436125 | MS.gene24827:CDS | 30.0% | |
| CAAGAATCATCAAAACATGT+TGG | - | chr8.4:9439388-9439407 | MS.gene24827:intron | 30.0% | |
| CCATTGAAATCAGTTTATAC+TGG | + | chr8.4:9439643-9439662 | None:intergenic | 30.0% | |
| CTATAACATCATGCTTTGTA+TGG | - | chr8.4:9436238-9436257 | MS.gene24827:CDS | 30.0% | |
| CTATATAAAGACAAGATGGA+TGG | + | chr8.4:9438532-9438551 | None:intergenic | 30.0% | |
| CTTTCTTACCTCTTTAGATT+TGG | - | chr8.4:9437908-9437927 | MS.gene24827:intron | 30.0% | |
| GAAAACTAGTTATAGCTTTC+TGG | + | chr8.4:9438204-9438223 | None:intergenic | 30.0% | |
| GAACATACCATTTAGTAGTA+GGG | - | chr8.4:9436722-9436741 | MS.gene24827:CDS | 30.0% | |
| GATCTCATTATAAATCCATG+TGG | + | chr8.4:9438977-9438996 | None:intergenic | 30.0% | |
| GGAAGGAAAAAGAGATTAAT+GGG | - | chr8.4:9439159-9439178 | MS.gene24827:intron | 30.0% | |
| GTATTTCTTTACACTTACGA+TGG | - | chr8.4:9439446-9439465 | MS.gene24827:CDS | 30.0% | |
| TACAAAGCATGATGTTATAG+TGG | + | chr8.4:9436238-9436257 | None:intergenic | 30.0% | |
| TAGAGTAAGGTGATTAGAAA+TGG | + | chr8.4:9439024-9439043 | None:intergenic | 30.0% | |
| TCTCAAAAACTCCAATATCT+TGG | - | chr8.4:9438439-9438458 | MS.gene24827:intron | 30.0% | |
| TGAAAAAGCTCAATCTTATC+AGG | - | chr8.4:9436064-9436083 | MS.gene24827:CDS | 30.0% | |
| TGAACATACCATTTAGTAGT+AGG | - | chr8.4:9436721-9436740 | MS.gene24827:CDS | 30.0% | |
| TGAAGAATTTGGAAACAAAC+TGG | - | chr8.4:9438863-9438882 | MS.gene24827:intron | 30.0% | |
| TGGAAGGAAAAAGAGATTAA+TGG | - | chr8.4:9439158-9439177 | MS.gene24827:intron | 30.0% | |
| TGTGAAAATTCCAAATGGTA+GGG | - | chr8.4:9437047-9437066 | MS.gene24827:CDS | 30.0% | |
| TTACACTTACGATGGAAATA+TGG | - | chr8.4:9439454-9439473 | MS.gene24827:CDS | 30.0% | |
| TTATATTATAAGAAGGCAGG+CGG | - | chr8.4:9437746-9437765 | MS.gene24827:intron | 30.0% | |
| TTATTACTTGTCTGGATTGA+TGG | + | chr8.4:9439525-9439544 | None:intergenic | 30.0% | |
| TTGTGAAAATTCCAAATGGT+AGG | - | chr8.4:9437046-9437065 | MS.gene24827:CDS | 30.0% | |
| TTGTTTCCAAATTCTTCAAC+TGG | + | chr8.4:9438861-9438880 | None:intergenic | 30.0% | |
| TTTAGAGAGAAGAAAAAGCT+TGG | - | chr8.4:9435954-9435973 | MS.gene24827:intron | 30.0% | |
| TTTGTTTCACAAATACATCC+TGG | + | chr8.4:9439843-9439862 | None:intergenic | 30.0% | |
| ! | ACAATCATCCCAACTTTTAA+AGG | - | chr8.4:9438164-9438183 | MS.gene24827:CDS | 30.0% |
| ! | ACACCATACCAACTTTTATA+TGG | - | chr8.4:9436944-9436963 | MS.gene24827:intron | 30.0% |
| ! | ATGCTTTTATGCAATCAACT+AGG | - | chr8.4:9436529-9436548 | MS.gene24827:intron | 30.0% |
| ! | CAATCATCCCAACTTTTAAA+GGG | - | chr8.4:9438165-9438184 | MS.gene24827:CDS | 30.0% |
| ! | CAATCTTCCCTTTAAAAGTT+GGG | + | chr8.4:9438175-9438194 | None:intergenic | 30.0% |
| ! | CCAGTATAAACTGATTTCAA+TGG | - | chr8.4:9439640-9439659 | MS.gene24827:CDS | 30.0% |
| ! | CTTAGTTTCTGTATGGATTT+TGG | + | chr8.4:9438801-9438820 | None:intergenic | 30.0% |
| ! | CTTCTAACATGAAGTTTTTG+CGG | - | chr8.4:9439571-9439590 | MS.gene24827:CDS | 30.0% |
| ! | GCATTTTATTGATACACTGA+AGG | - | chr8.4:9438362-9438381 | MS.gene24827:intron | 30.0% |
| ! | TAAATTTTGAGCACAGGTTA+TGG | + | chr8.4:9438475-9438494 | None:intergenic | 30.0% |
| ! | TGTTAGTAATTTTTGTTGCG+TGG | - | chr8.4:9436500-9436519 | MS.gene24827:intron | 30.0% |
| !! | GATATTGGAGTTTTTGAGAA+CGG | + | chr8.4:9438438-9438457 | None:intergenic | 30.0% |
| !! | GCATTACTTTCTTTTGTTTG+GGG | - | chr8.4:9437138-9437157 | MS.gene24827:CDS | 30.0% |
| !! | GTTTGTGGACTTAATTTGTT+TGG | - | chr8.4:9437394-9437413 | MS.gene24827:intron | 30.0% |
| !! | TAAAAGCTTTCTTCTAGCTT+TGG | + | chr8.4:9439807-9439826 | None:intergenic | 30.0% |
| !! | TGTTAAACTTGTTGATCAGT+TGG | - | chr8.4:9439683-9439702 | MS.gene24827:CDS | 30.0% |
| !!! | AAAGGGTCAATTCAGTTTTT+TGG | - | chr8.4:9436123-9436142 | MS.gene24827:CDS | 30.0% |
| !!! | TCTATGAAGTTTTTTCACCT+TGG | + | chr8.4:9439742-9439761 | None:intergenic | 30.0% |
| AAAGAAATACGTCACTCTGA+AGG | + | chr8.4:9439436-9439455 | None:intergenic | 35.0% | |
| AACTCCATCGGAATTTGATT+CGG | + | chr8.4:9435652-9435671 | None:intergenic | 35.0% | |
| AAGAAATACGTCACTCTGAA+GGG | + | chr8.4:9439435-9439454 | None:intergenic | 35.0% | |
| AAGAGATTAATGGGACTGAA+AGG | - | chr8.4:9439168-9439187 | MS.gene24827:intron | 35.0% | |
| AATCATCAAAACATGTTGGC+TGG | - | chr8.4:9439392-9439411 | MS.gene24827:intron | 35.0% | |
| ACTCCTATATGCATAACCAA+GGG | + | chr8.4:9437280-9437299 | None:intergenic | 35.0% | |
| AGAACCTCTGTCTTGTAATA+AGG | + | chr8.4:9438708-9438727 | None:intergenic | 35.0% | |
| AGAAGAAAAAGCTTGGACAT+TGG | - | chr8.4:9435961-9435980 | MS.gene24827:intron | 35.0% | |
| AGAGGAATGAGAGAAAATGT+TGG | + | chr8.4:9439339-9439358 | None:intergenic | 35.0% | |
| AGGAATGAGAGAAAATGTTG+GGG | + | chr8.4:9439337-9439356 | None:intergenic | 35.0% | |
| AGGGATGCAATTATTTGATG+TGG | + | chr8.4:9438631-9438650 | None:intergenic | 35.0% | |
| AGTTTGGATCCATTTAACTG+TGG | - | chr8.4:9436848-9436867 | MS.gene24827:intron | 35.0% | |
| CCAATCATCCAAATCTAAAG+AGG | + | chr8.4:9437919-9437938 | None:intergenic | 35.0% | |
| CCATCTTGTCTTTATATAGC+CGG | - | chr8.4:9438533-9438552 | MS.gene24827:intron | 35.0% | |
| CCTAAATCAGATGAGATTTG+GGG | - | chr8.4:9437701-9437720 | MS.gene24827:intron | 35.0% | |
| CCTCTTTAGATTTGGATGAT+TGG | - | chr8.4:9437916-9437935 | MS.gene24827:intron | 35.0% | |
| CGGCTAAGTTGTTAAGTAAA+CGG | - | chr8.4:9438553-9438572 | MS.gene24827:intron | 35.0% | |
| CGTTTACTTAACAACTTAGC+CGG | + | chr8.4:9438555-9438574 | None:intergenic | 35.0% | |
| CTCAACTGCATAATAGGAAA+AGG | + | chr8.4:9437586-9437605 | None:intergenic | 35.0% | |
| CTTAAATGAAGGGCAAGATA+AGG | + | chr8.4:9438915-9438934 | None:intergenic | 35.0% | |
| CTTATCTTGCCCTTCATTTA+AGG | - | chr8.4:9438913-9438932 | MS.gene24827:intron | 35.0% | |
| GAGGAATGAGAGAAAATGTT+GGG | + | chr8.4:9439338-9439357 | None:intergenic | 35.0% | |
| GATCCATTTAACTGTGGAAA+TGG | - | chr8.4:9436854-9436873 | MS.gene24827:intron | 35.0% | |
| GATTGTATCTTACACTGCAA+AGG | - | chr8.4:9436105-9436124 | MS.gene24827:CDS | 35.0% | |
| GATTTACCACATTCTTGTTG+AGG | - | chr8.4:9438502-9438521 | MS.gene24827:intron | 35.0% | |
| GCCTAAATCAGATGAGATTT+GGG | - | chr8.4:9437700-9437719 | MS.gene24827:intron | 35.0% | |
| GGAATACTCAACTGCATAAT+AGG | + | chr8.4:9437592-9437611 | None:intergenic | 35.0% | |
| GGGATGATTGTCTAAAGAAA+AGG | + | chr8.4:9438155-9438174 | None:intergenic | 35.0% | |
| GTTAAATGGATCCAAACTTG+TGG | + | chr8.4:9436846-9436865 | None:intergenic | 35.0% | |
| GTTCTTAAGATTTGTGCTAC+TGG | - | chr8.4:9436023-9436042 | MS.gene24827:CDS | 35.0% | |
| GTTGTCCACCATATAAAAGT+TGG | + | chr8.4:9436955-9436974 | None:intergenic | 35.0% | |
| TACACGCCTTAATGTTTGTT+TGG | - | chr8.4:9436798-9436817 | MS.gene24827:intron | 35.0% | |
| TATGCATATAGGAGTCAAGA+AGG | - | chr8.4:9437285-9437304 | MS.gene24827:intron | 35.0% | |
| TCAATGCTCTGTAGTTTACA+CGG | + | chr8.4:9438827-9438846 | None:intergenic | 35.0% | |
| TCTAGAGAGATCGATACATT+GGG | + | chr8.4:9437525-9437544 | None:intergenic | 35.0% | |
| TCTCCATTTCCACAGTTAAA+TGG | + | chr8.4:9436860-9436879 | None:intergenic | 35.0% | |
| TGCTGTTGCTAAGATTATGA+AGG | - | chr8.4:9437821-9437840 | MS.gene24827:CDS | 35.0% | |
| TTACGATGGAAATATGGCAA+AGG | - | chr8.4:9439460-9439479 | MS.gene24827:CDS | 35.0% | |
| TTATTCAGGAATCAGAAGTC+TGG | - | chr8.4:9437474-9437493 | MS.gene24827:intron | 35.0% | |
| TTGATGCCAGATATGTGATA+TGG | - | chr8.4:9437797-9437816 | MS.gene24827:CDS | 35.0% | |
| ! | AGGAAGTATGAAATATCTCG+AGG | - | chr8.4:9439304-9439323 | MS.gene24827:intron | 35.0% |
| ! | CCATACCAACTTTTATATGG+TGG | - | chr8.4:9436947-9436966 | MS.gene24827:intron | 35.0% |
| ! | GAATCCATTGCTGTAGATTT+TGG | - | chr8.4:9435930-9435949 | MS.gene24827:intron | 35.0% |
| ! | GCAATCTTCCCTTTAAAAGT+TGG | + | chr8.4:9438176-9438195 | None:intergenic | 35.0% |
| ! | GTCATTTGTTAATGTGTGCA+AGG | - | chr8.4:9436356-9436375 | MS.gene24827:CDS | 35.0% |
| ! | GTGGTAATGTCTCTACTATA+TGG | + | chr8.4:9438395-9438414 | None:intergenic | 35.0% |
| ! | TATAATGGGGTGAAGAACTT+AGG | - | chr8.4:9436631-9436650 | MS.gene24827:CDS | 35.0% |
| ! | TGGGTGAAATTTTCACTGTT+GGG | + | chr8.4:9437506-9437525 | None:intergenic | 35.0% |
| ! | TGTGGGGTTTGTTTGTTTAT+GGG | - | chr8.4:9435999-9436018 | MS.gene24827:CDS | 35.0% |
| ! | TTAAGATTTGTGCTACTGGT+TGG | - | chr8.4:9436027-9436046 | MS.gene24827:CDS | 35.0% |
| ! | TTCTAGAGAGATCGATACAT+TGG | + | chr8.4:9437526-9437545 | None:intergenic | 35.0% |
| ! | TTGACTCGAAAAGTAAAAGC+TGG | + | chr8.4:9436418-9436437 | None:intergenic | 35.0% |
| ! | TTGGGTGAAATTTTCACTGT+TGG | + | chr8.4:9437507-9437526 | None:intergenic | 35.0% |
| ! | TTGTGGGGTTTGTTTGTTTA+TGG | - | chr8.4:9435998-9436017 | MS.gene24827:CDS | 35.0% |
| !! | ACTTTCTTTTGTTTGGGGAT+TGG | - | chr8.4:9437143-9437162 | MS.gene24827:CDS | 35.0% |
| !! | AGAAAAGGCTTTGAAATCGA+TGG | + | chr8.4:9438140-9438159 | None:intergenic | 35.0% |
| !! | AGATCACTTTGTGCTGATTT+AGG | + | chr8.4:9438737-9438756 | None:intergenic | 35.0% |
| !! | ATTTCACTCATACTGATTCC+CGG | - | chr8.4:9438757-9438776 | MS.gene24827:intron | 35.0% |
| !! | CCACCATATAAAAGTTGGTA+TGG | + | chr8.4:9436950-9436969 | None:intergenic | 35.0% |
| !! | GCTTTAAGGATTTGTTTGAC+TGG | - | chr8.4:9438337-9438356 | MS.gene24827:intron | 35.0% |
| !!! | GATGTTTTTGGTGTTTTGTG+GGG | - | chr8.4:9435983-9436002 | MS.gene24827:CDS | 35.0% |
| !!! | GGATGTTTTTGGTGTTTTGT+GGG | - | chr8.4:9435982-9436001 | MS.gene24827:CDS | 35.0% |
| !!! | TGGATGTTTTTGGTGTTTTG+TGG | - | chr8.4:9435981-9436000 | MS.gene24827:CDS | 35.0% |
| AAACTTCATAGAGACCGTGA+CGG | - | chr8.4:9439750-9439769 | MS.gene24827:CDS | 40.0% | |
| AAATGGATCCAAACTTGTGG+TGG | + | chr8.4:9436843-9436862 | None:intergenic | 40.0% | |
| AACTCCAATATCTTGGTCCA+AGG | - | chr8.4:9438446-9438465 | MS.gene24827:intron | 40.0% | |
| AATATGGCAAAGGCTGTACA+AGG | - | chr8.4:9439470-9439489 | MS.gene24827:CDS | 40.0% | |
| AATTCCAAATGGTAGGGAGA+TGG | - | chr8.4:9437053-9437072 | MS.gene24827:CDS | 40.0% | |
| ACGGCATCTTAGTTTCTGTA+TGG | + | chr8.4:9438808-9438827 | None:intergenic | 40.0% | |
| AGTAGTAAGGAAGTTTCCCT+CGG | + | chr8.4:9439221-9439240 | None:intergenic | 40.0% | |
| ATGCATAACCAAGGGATCTT+TGG | + | chr8.4:9437272-9437291 | None:intergenic | 40.0% | |
| CAGAAGAAGATGAAGAACTG+AGG | - | chr8.4:9439111-9439130 | MS.gene24827:intron | 40.0% | |
| CAGCAACCATATCACATATC+TGG | + | chr8.4:9437806-9437825 | None:intergenic | 40.0% | |
| CATGTTTCTCAGAGAGTTCA+TGG | - | chr8.4:9435873-9435892 | MS.gene24827:intron | 40.0% | |
| CCCCAAATCTCATCTGATTT+AGG | + | chr8.4:9437704-9437723 | None:intergenic | 40.0% | |
| CCGGCTATATAAAGACAAGA+TGG | + | chr8.4:9438536-9438555 | None:intergenic | 40.0% | |
| GACTCCTATATGCATAACCA+AGG | + | chr8.4:9437281-9437300 | None:intergenic | 40.0% | |
| GATCCCTTGGTTATGCATAT+AGG | - | chr8.4:9437274-9437293 | MS.gene24827:intron | 40.0% | |
| GGCCTAAATCAGATGAGATT+TGG | - | chr8.4:9437699-9437718 | MS.gene24827:intron | 40.0% | |
| GGTTCCTTATTACAAGACAG+AGG | - | chr8.4:9438701-9438720 | MS.gene24827:intron | 40.0% | |
| GTGTGGATGTTTGTTCAAAG+TGG | - | chr8.4:9436203-9436222 | MS.gene24827:CDS | 40.0% | |
| GTTACCTTGGACCAAGATAT+TGG | + | chr8.4:9438453-9438472 | None:intergenic | 40.0% | |
| TACCACATTCTTGTTGAGGT+CGG | - | chr8.4:9438506-9438525 | MS.gene24827:intron | 40.0% | |
| TACGAGGTATGATCAAGAGA+AGG | + | chr8.4:9437861-9437880 | None:intergenic | 40.0% | |
| TCAGCTCCAGTTGAAGAATT+TGG | - | chr8.4:9438852-9438871 | MS.gene24827:intron | 40.0% | |
| TCTAACACTTCTTCCGATCT+GGG | + | chr8.4:9435819-9435838 | None:intergenic | 40.0% | |
| TCTTGATCATACCTCGTACT+GGG | - | chr8.4:9437863-9437882 | MS.gene24827:intron | 40.0% | |
| TGCAATCAACTAGGTTGCTT+TGG | - | chr8.4:9436538-9436557 | MS.gene24827:intron | 40.0% | |
| TGCTCCATATCTAAGAGAGT+CGG | - | chr8.4:9439773-9439792 | MS.gene24827:CDS | 40.0% | |
| TGGACGAAGGAAACATTTCT+TGG | - | chr8.4:9439703-9439722 | MS.gene24827:CDS | 40.0% | |
| TTCTCCGAATCAAATTCCGA+TGG | - | chr8.4:9435645-9435664 | MS.gene24827:CDS | 40.0% | |
| TTGGAAAAAGTTCAGCTCCA+AGG | - | chr8.4:9439722-9439741 | MS.gene24827:CDS | 40.0% | |
| ! | AATCAACTAGGTTGCTTTGG+AGG | - | chr8.4:9436541-9436560 | MS.gene24827:intron | 40.0% |
| ! | ACCAAGTGCTCTAAGTAGTA+AGG | + | chr8.4:9439234-9439253 | None:intergenic | 40.0% |
| ! | ACCCATCACTTGATAGCAAA+AGG | + | chr8.4:9438246-9438265 | None:intergenic | 40.0% |
| ! | ACTCTAAAGACGGTAGAAAC+AGG | - | chr8.4:9437321-9437340 | MS.gene24827:intron | 40.0% |
| ! | ATATGAAGTTGGTCACTGGA+AGG | - | chr8.4:9439142-9439161 | MS.gene24827:intron | 40.0% |
| ! | CATGAACTCTCTGAGAAACA+TGG | + | chr8.4:9435875-9435894 | None:intergenic | 40.0% |
| ! | CCCATCACTTGATAGCAAAA+GGG | + | chr8.4:9438245-9438264 | None:intergenic | 40.0% |
| ! | GCTTGGACATTGGATGTTTT+TGG | - | chr8.4:9435971-9435990 | MS.gene24827:intron | 40.0% |
| ! | GTATCTAGAATGCAGCAGAA+TGG | - | chr8.4:9438885-9438904 | MS.gene24827:intron | 40.0% |
| ! | TCCTTACTACTTAGAGCACT+TGG | - | chr8.4:9439230-9439249 | MS.gene24827:intron | 40.0% |
| ! | TCTACAGCAATGGATTCAAG+TGG | + | chr8.4:9435927-9435946 | None:intergenic | 40.0% |
| ! | TGTGGAACGAACTCTAAAGA+CGG | - | chr8.4:9437311-9437330 | MS.gene24827:intron | 40.0% |
| ! | TTTTATGCAAATCCTCTGCC+AGG | - | chr8.4:9439822-9439841 | MS.gene24827:CDS | 40.0% |
| !! | ACCCTTTTGCTATCAAGTGA+TGG | - | chr8.4:9438241-9438260 | MS.gene24827:CDS | 40.0% |
| !! | ACTTTGTGCTGATTTAGGAG+GGG | + | chr8.4:9438732-9438751 | None:intergenic | 40.0% |
| !! | CACTTTGTGCTGATTTAGGA+GGG | + | chr8.4:9438733-9438752 | None:intergenic | 40.0% |
| !! | CCCTTTTGCTATCAAGTGAT+GGG | - | chr8.4:9438242-9438261 | MS.gene24827:CDS | 40.0% |
| !! | GATTTCAATGGTGTTGATGC+AGG | - | chr8.4:9439652-9439671 | MS.gene24827:CDS | 40.0% |
| !! | TCACTTTGTGCTGATTTAGG+AGG | + | chr8.4:9438734-9438753 | None:intergenic | 40.0% |
| !! | TTCTTTTGTTTGGGGATTGG+AGG | - | chr8.4:9437146-9437165 | MS.gene24827:CDS | 40.0% |
| AAGACGGTAGAAACAGGAGT+AGG | - | chr8.4:9437327-9437346 | MS.gene24827:intron | 45.0% | |
| AAGTGAGTGGAGGGATATCT+TGG | + | chr8.4:9437613-9437632 | None:intergenic | 45.0% | |
| AATGCCATTGTTAGCAAGCC+GGG | + | chr8.4:9438778-9438797 | None:intergenic | 45.0% | |
| ACATTACCACCTACCTATGC+TGG | - | chr8.4:9438405-9438424 | MS.gene24827:intron | 45.0% | |
| ACCATTTAGTAGTAGGGAGC+TGG | - | chr8.4:9436728-9436747 | MS.gene24827:CDS | 45.0% | |
| ACTGAAAGGAGATTGCTTGG+TGG | - | chr8.4:9439182-9439201 | MS.gene24827:intron | 45.0% | |
| ACTTGTCTCCACCACAAGTT+TGG | - | chr8.4:9436832-9436851 | MS.gene24827:intron | 45.0% | |
| AGCACAGGTTATGGTTACCT+TGG | + | chr8.4:9438466-9438485 | None:intergenic | 45.0% | |
| AGGCAGATGCGATATGAAGT+TGG | - | chr8.4:9439131-9439150 | MS.gene24827:intron | 45.0% | |
| AGGTAAATCCTGGTGTGTGA+TGG | + | chr8.4:9439260-9439279 | None:intergenic | 45.0% | |
| CAAAGGCTGTACAAGGTCAT+AGG | - | chr8.4:9439477-9439496 | MS.gene24827:CDS | 45.0% | |
| CAGGAACTATCTGACTCCAA+TGG | - | chr8.4:9437222-9437241 | MS.gene24827:intron | 45.0% | |
| CCATTTAGTAGTAGGGAGCT+GGG | - | chr8.4:9436729-9436748 | MS.gene24827:CDS | 45.0% | |
| CGATAGACCTGTTCAAAGCA+TGG | - | chr8.4:9438029-9438048 | MS.gene24827:intron | 45.0% | |
| CTCATCTTCAGAAGACAGAG+AGG | + | chr8.4:9439357-9439376 | None:intergenic | 45.0% | |
| CTCTAACACTTCTTCCGATC+TGG | + | chr8.4:9435820-9435839 | None:intergenic | 45.0% | |
| CTCTTGATCATACCTCGTAC+TGG | - | chr8.4:9437862-9437881 | MS.gene24827:intron | 45.0% | |
| CTGTGGAAATGGAGAAGCTA+CGG | - | chr8.4:9436865-9436884 | MS.gene24827:intron | 45.0% | |
| CTTGTTGATCAGTTGGACGA+AGG | - | chr8.4:9439690-9439709 | MS.gene24827:CDS | 45.0% | |
| GAAGTTTCCCTCGGAGTTAA+TGG | + | chr8.4:9439212-9439231 | None:intergenic | 45.0% | |
| GAATGCCATTGTTAGCAAGC+CGG | + | chr8.4:9438779-9438798 | None:intergenic | 45.0% | |
| GAGTTCTCACTTTAGCAGTG+TGG | + | chr8.4:9437359-9437378 | None:intergenic | 45.0% | |
| GCAAATCAACTCACCCAGAT+CGG | - | chr8.4:9435803-9435822 | MS.gene24827:CDS | 45.0% | |
| GCTCCATATCTAAGAGAGTC+GGG | - | chr8.4:9439774-9439793 | MS.gene24827:CDS | 45.0% | |
| GTGCTAGATGCAAAGACCAA+CGG | - | chr8.4:9437651-9437670 | MS.gene24827:CDS | 45.0% | |
| GTTTCTCAGAGAGTTCATGG+TGG | - | chr8.4:9435876-9435895 | MS.gene24827:intron | 45.0% | |
| TAGGAGTCAAGAAGGAGATG+TGG | - | chr8.4:9437293-9437312 | MS.gene24827:intron | 45.0% | |
| TCACAAATACATCCTGGCAG+AGG | + | chr8.4:9439837-9439856 | None:intergenic | 45.0% | |
| TCTCCCGACTCTCTTAGATA+TGG | + | chr8.4:9439780-9439799 | None:intergenic | 45.0% | |
| TGAATTCCAGCATAGGTAGG+TGG | + | chr8.4:9438414-9438433 | None:intergenic | 45.0% | |
| TGATGACCATGCTTCGAAAC+AGG | + | chr8.4:9435843-9435862 | None:intergenic | 45.0% | |
| TTAGAGCCTGTTTCGAAGCA+TGG | - | chr8.4:9435834-9435853 | MS.gene24827:intron | 45.0% | |
| ! | ACAAATCGTGCGTCCACTTT+TGG | - | chr8.4:9436901-9436920 | MS.gene24827:intron | 45.0% |
| ! | AGTTCATGGTGGAGTTGTGA+AGG | - | chr8.4:9435887-9435906 | MS.gene24827:intron | 45.0% |
| ! | ATTTGTGCTACTGGTTGGCT+TGG | - | chr8.4:9436032-9436051 | MS.gene24827:CDS | 45.0% |
| ! | GTTCATGGTGGAGTTGTGAA+GGG | - | chr8.4:9435888-9435907 | MS.gene24827:intron | 45.0% |
| ! | TGCGATATGAAGTTGGTCAC+TGG | - | chr8.4:9439138-9439157 | MS.gene24827:intron | 45.0% |
| ! | TGCTATGCCATGCTTTGAAC+AGG | + | chr8.4:9438039-9438058 | None:intergenic | 45.0% |
| !! | CAAATCGTGCGTCCACTTTT+GGG | - | chr8.4:9436902-9436921 | MS.gene24827:intron | 45.0% |
| !! | TTAGATATGGAGCACCGTCA+CGG | + | chr8.4:9439767-9439786 | None:intergenic | 45.0% |
| !! | TTGGTTTTCCATCACACACC+AGG | - | chr8.4:9439249-9439268 | MS.gene24827:intron | 45.0% |
| !!! | ATTTAATTTAATATAATCTT+TGG | - | chr8.4:9436148-9436167 | MS.gene24827:CDS | 5.0% |
| ACCAGGATTTACCTCGTAGC+TGG | - | chr8.4:9439266-9439285 | MS.gene24827:intron | 50.0% | |
| ACGGTAGAAACAGGAGTAGG+TGG | - | chr8.4:9437330-9437349 | MS.gene24827:intron | 50.0% | |
| CATATGCTTCTCCAGCTACG+AGG | + | chr8.4:9439280-9439299 | None:intergenic | 50.0% | |
| CCCAGCTCCCTACTACTAAA+TGG | + | chr8.4:9436732-9436751 | None:intergenic | 50.0% | |
| GAACGGCTGAATTCCAGCAT+AGG | + | chr8.4:9438421-9438440 | None:intergenic | 50.0% | |
| GACTCCATCTCCCTACCATT+TGG | + | chr8.4:9437060-9437079 | None:intergenic | 50.0% | |
| GACTCGCTGTGAAACTCCAT+CGG | + | chr8.4:9435664-9435683 | None:intergenic | 50.0% | |
| GGCTGAATTCCAGCATAGGT+AGG | + | chr8.4:9438417-9438436 | None:intergenic | 50.0% | |
| GGGACTGAAAGGAGATTGCT+TGG | - | chr8.4:9439179-9439198 | MS.gene24827:intron | 50.0% | |
| GTCAACAGTCCACGTTTCTC+CGG | - | chr8.4:9435681-9435700 | MS.gene24827:CDS | 50.0% | |
| TCCAGCTACGAGGTAAATCC+TGG | + | chr8.4:9439270-9439289 | None:intergenic | 50.0% | |
| TGCGTTTGAAGGACTGAGCA+CGG | + | chr8.4:9435719-9435738 | None:intergenic | 50.0% | |
| TGGCTGTCCATTAACTCCGA+GGG | - | chr8.4:9439202-9439221 | MS.gene24827:intron | 50.0% | |
| TTAGTAGTAGGGAGCTGGGA+AGG | - | chr8.4:9436733-9436752 | MS.gene24827:CDS | 50.0% | |
| TTGTTTGGGGATTGGAGGCA+GGG | - | chr8.4:9437151-9437170 | MS.gene24827:CDS | 50.0% | |
| TTTCAGCCGCTACCCAAAAG+TGG | + | chr8.4:9436917-9436936 | None:intergenic | 50.0% | |
| TTTGTTTGGGGATTGGAGGC+AGG | - | chr8.4:9437150-9437169 | MS.gene24827:CDS | 50.0% | |
| ! | CTAGTGGACCAAAGATCCCT+TGG | - | chr8.4:9437261-9437280 | MS.gene24827:intron | 50.0% |
| ! | CTCGTAGCTGGAGAAGCATA+TGG | - | chr8.4:9439278-9439297 | MS.gene24827:intron | 50.0% |
| ! | GCTGGAGAAGCATATGGAAG+AGG | - | chr8.4:9439284-9439303 | MS.gene24827:intron | 50.0% |
| !! | GATTCCCGGCTTGCTAACAA+TGG | - | chr8.4:9438771-9438790 | MS.gene24827:intron | 50.0% |
| GCTGGCGTTGTTGCGTTTGA+AGG | + | chr8.4:9435730-9435749 | None:intergenic | 55.0% | |
| GGCCGACCTCAACAAGAATG+TGG | + | chr8.4:9438511-9438530 | None:intergenic | 55.0% | |
| GTGGCTGTCCATTAACTCCG+AGG | - | chr8.4:9439201-9439220 | MS.gene24827:intron | 55.0% | |
| !! | GTGCGTCCACTTTTGGGTAG+CGG | - | chr8.4:9436908-9436927 | MS.gene24827:intron | 55.0% |
| CCTCGTACTGGGCTGATCAG+AGG | - | chr8.4:9437874-9437893 | MS.gene24827:intron | 60.0% | |
| CCTCTGATCAGCCCAGTACG+AGG | + | chr8.4:9437877-9437896 | None:intergenic | 60.0% | |
| GACTGAGCACGGCGAGTCAT+CGG | + | chr8.4:9435708-9435727 | None:intergenic | 60.0% | |
| GTCATCGGACCGGAGAAACG+TGG | + | chr8.4:9435693-9435712 | None:intergenic | 60.0% | |
| AGCACGGCGAGTCATCGGAC+CGG | + | chr8.4:9435703-9435722 | None:intergenic | 65.0% | |
| GAGTGCGCCGCCGCTCACGA+CGG | + | chr8.4:9435760-9435779 | None:intergenic | 75.0% | |
| ! | AGCGCCGCCGCCGTCGTGAG+CGG | - | chr8.4:9435747-9435766 | MS.gene24827:CDS | 80.0% |
| ! | TGCGCCGCCGCTCACGACGG+CGG | + | chr8.4:9435757-9435776 | None:intergenic | 80.0% |
| ! | GCCGCCGCCGTCGTGAGCGG+CGG | - | chr8.4:9435750-9435769 | MS.gene24827:CDS | 85.0% |
| ! | GCCGCCGCTCACGACGGCGG+CGG | + | chr8.4:9435754-9435773 | None:intergenic | 85.0% |
| ! | GCTCACGACGGCGGCGGCGC+TGG | + | chr8.4:9435748-9435767 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 9435636 | 9439875 | 9435636 | ID=MS.gene24827 |
| chr8.4 | mRNA | 9435636 | 9439875 | 9435636 | ID=MS.gene24827.t1;Parent=MS.gene24827 |
| chr8.4 | exon | 9439426 | 9439875 | 9439426 | ID=MS.gene24827.t1.exon1;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9439426 | 9439875 | 9439426 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9438143 | 9438286 | 9438143 | ID=MS.gene24827.t1.exon2;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9438143 | 9438286 | 9438143 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9437957 | 9438029 | 9437957 | ID=MS.gene24827.t1.exon3;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9437957 | 9438029 | 9437957 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9437789 | 9437859 | 9437789 | ID=MS.gene24827.t1.exon4;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9437789 | 9437859 | 9437789 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9437616 | 9437704 | 9437616 | ID=MS.gene24827.t1.exon5;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9437616 | 9437704 | 9437616 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9437044 | 9437176 | 9437044 | ID=MS.gene24827.t1.exon6;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9437044 | 9437176 | 9437044 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9436577 | 9436809 | 9436577 | ID=MS.gene24827.t1.exon7;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9436577 | 9436809 | 9436577 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9435974 | 9436450 | 9435974 | ID=MS.gene24827.t1.exon8;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9435974 | 9436450 | 9435974 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| chr8.4 | exon | 9435636 | 9435837 | 9435636 | ID=MS.gene24827.t1.exon9;Parent=MS.gene24827.t1 |
| chr8.4 | CDS | 9435636 | 9435837 | 9435636 | ID=cds.MS.gene24827.t1;Parent=MS.gene24827.t1 |
| Gene Sequence |
| Protein sequence |
