Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051819.t1 | XP_013458415.1 | 98.9 | 623 | 7 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1240.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051819.t1 | Q94BY4 | 69.5 | 637 | 162 | 5 | 10 | 618 | 9 | 641 | 6.4e-252 | 871.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051819.t1 | A0A072USY2 | 98.9 | 623 | 7 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1240.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050359 | MS.gene051819 | 0.807548 | 4.79E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene052307 | 0.809749 | 1.62E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene053143 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene064243 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene065593 | 0.82608 | 3.30E-54 | -1.69E-46 |
| MS.gene051819 | MS.gene067043 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene072326 | 0.80676 | 7.03E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene072887 | 0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene20839 | 0.80657 | 7.72E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene24806 | 0.819532 | 1.11E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene24827 | 0.960886 | 4.57E-119 | -1.69E-46 |
| MS.gene051819 | MS.gene25244 | 0.817012 | 4.11E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene26505 | 0.895111 | 1.31E-75 | -1.69E-46 |
| MS.gene051819 | MS.gene26672 | 0.802869 | 4.57E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene32636 | 0.808753 | 2.65E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene39046 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene051819 | MS.gene40093 | 0.823857 | 1.10E-53 | -1.69E-46 |
| MS.gene051819 | MS.gene42528 | 0.821706 | 3.50E-53 | -1.69E-46 |
| MS.gene051819 | MS.gene45281 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene46918 | 0.815309 | 9.87E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene51384 | 0.829792 | 4.22E-55 | -1.69E-46 |
| MS.gene051819 | MS.gene52956 | 0.811126 | 8.18E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene59366 | 0.807914 | 4.00E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene59435 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene62485 | 0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene74235 | 0.803987 | 2.68E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene75507 | 0.806146 | 9.48E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene75564 | 0.80719 | 5.71E-50 | -1.69E-46 |
| MS.gene051819 | MS.gene75941 | 0.810772 | 9.76E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene77362 | 0.801417 | 9.09E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene80557 | 0.803601 | 3.22E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene88032 | 0.826563 | 2.53E-54 | -1.69E-46 |
| MS.gene051819 | MS.gene90121 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene90260 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene90263 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene90467 | 0.816043 | 6.78E-52 | -1.69E-46 |
| MS.gene051819 | MS.gene90778 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene92076 | 0.813486 | 2.50E-51 | -1.69E-46 |
| MS.gene051819 | MS.gene96231 | 0.811333 | 7.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68984 | MS.gene051819 | PPI |
| MS.gene051819 | MS.gene042158 | PPI |
| MS.gene012669 | MS.gene051819 | PPI |
| MS.gene68863 | MS.gene051819 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051819.t1 | MTR_4g125460 | 98.876 | 623 | 7 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1293 |
| MS.gene051819.t1 | MTR_4g125460 | 99.156 | 474 | 4 | 0 | 150 | 623 | 11 | 484 | 0.0 | 988 |
| MS.gene051819.t1 | MTR_4g019210 | 49.363 | 628 | 290 | 7 | 1 | 617 | 11 | 621 | 0.0 | 624 |
| MS.gene051819.t1 | MTR_5g081690 | 58.373 | 418 | 174 | 0 | 201 | 618 | 94 | 511 | 0.0 | 555 |
| MS.gene051819.t1 | MTR_5g064620 | 47.706 | 436 | 206 | 8 | 201 | 620 | 85 | 514 | 7.92e-137 | 410 |
| MS.gene051819.t1 | MTR_3g096020 | 47.454 | 432 | 214 | 6 | 199 | 620 | 161 | 589 | 1.98e-136 | 411 |
| MS.gene051819.t1 | MTR_4g082310 | 48.232 | 396 | 198 | 5 | 228 | 618 | 97 | 490 | 5.56e-134 | 402 |
| MS.gene051819.t1 | MTR_5g042200 | 48.492 | 398 | 198 | 5 | 228 | 620 | 85 | 480 | 1.26e-133 | 400 |
| MS.gene051819.t1 | MTR_3g099480 | 47.073 | 427 | 213 | 6 | 201 | 617 | 114 | 537 | 6.78e-133 | 400 |
| MS.gene051819.t1 | MTR_4g110030 | 49.367 | 395 | 185 | 6 | 227 | 611 | 115 | 504 | 1.50e-130 | 393 |
| MS.gene051819.t1 | MTR_2g059350 | 49.235 | 392 | 190 | 5 | 227 | 611 | 114 | 503 | 2.09e-130 | 393 |
| MS.gene051819.t1 | MTR_6g016015 | 48.724 | 392 | 192 | 5 | 227 | 611 | 114 | 503 | 3.77e-130 | 392 |
| MS.gene051819.t1 | MTR_4g100810 | 38.876 | 427 | 237 | 11 | 201 | 618 | 79 | 490 | 8.40e-92 | 294 |
| MS.gene051819.t1 | MTR_3g115220 | 39.059 | 425 | 239 | 11 | 201 | 618 | 82 | 493 | 1.58e-88 | 286 |
| MS.gene051819.t1 | MTR_3g086570 | 36.384 | 448 | 248 | 12 | 195 | 617 | 112 | 547 | 2.09e-88 | 285 |
| MS.gene051819.t1 | MTR_5g099010 | 37.875 | 433 | 240 | 10 | 201 | 622 | 90 | 504 | 3.01e-87 | 283 |
| MS.gene051819.t1 | MTR_3g026650 | 36.706 | 425 | 253 | 7 | 200 | 617 | 141 | 556 | 1.01e-86 | 281 |
| MS.gene051819.t1 | MTR_1g031590 | 36.626 | 486 | 266 | 16 | 155 | 617 | 80 | 546 | 8.89e-86 | 278 |
| MS.gene051819.t1 | MTR_5g012770 | 37.963 | 432 | 235 | 11 | 195 | 618 | 89 | 495 | 1.25e-85 | 277 |
| MS.gene051819.t1 | MTR_4g084570 | 37.029 | 451 | 246 | 14 | 194 | 622 | 118 | 552 | 1.70e-84 | 275 |
| MS.gene051819.t1 | MTR_4g023030 | 36.279 | 430 | 254 | 8 | 197 | 617 | 198 | 616 | 6.51e-81 | 268 |
| MS.gene051819.t1 | MTR_3g005340 | 36.795 | 443 | 239 | 13 | 196 | 618 | 124 | 545 | 4.97e-79 | 261 |
| MS.gene051819.t1 | MTR_5g032100 | 34.632 | 462 | 249 | 11 | 196 | 618 | 55 | 502 | 8.43e-79 | 258 |
| MS.gene051819.t1 | MTR_3g100310 | 35.000 | 460 | 246 | 12 | 199 | 619 | 72 | 517 | 2.50e-76 | 253 |
| MS.gene051819.t1 | MTR_3g026650 | 37.822 | 349 | 208 | 5 | 200 | 541 | 141 | 487 | 6.50e-75 | 248 |
| MS.gene051819.t1 | MTR_1g102030 | 36.712 | 444 | 236 | 13 | 201 | 619 | 61 | 484 | 1.10e-74 | 248 |
| MS.gene051819.t1 | MTR_5g059260 | 36.879 | 423 | 237 | 12 | 216 | 617 | 146 | 559 | 1.26e-72 | 244 |
| MS.gene051819.t1 | MTR_4g010990 | 33.958 | 427 | 247 | 12 | 199 | 620 | 45 | 441 | 4.43e-64 | 218 |
| MS.gene051819.t1 | MTR_3g086570 | 37.267 | 322 | 175 | 8 | 195 | 492 | 112 | 430 | 6.49e-64 | 217 |
| MS.gene051819.t1 | MTR_2g016470 | 32.118 | 439 | 240 | 10 | 227 | 618 | 188 | 615 | 5.13e-63 | 219 |
| MS.gene051819.t1 | MTR_4g010990 | 33.508 | 382 | 220 | 11 | 243 | 620 | 1 | 352 | 9.08e-56 | 193 |
| MS.gene051819.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 38 | 494 | 1.89e-55 | 196 |
| MS.gene051819.t1 | MTR_1g101990 | 39.116 | 294 | 159 | 9 | 332 | 619 | 1 | 280 | 3.84e-55 | 190 |
| MS.gene051819.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 137 | 593 | 2.33e-54 | 195 |
| MS.gene051819.t1 | MTR_3g026650 | 37.548 | 261 | 155 | 4 | 200 | 454 | 141 | 399 | 7.84e-51 | 181 |
| MS.gene051819.t1 | MTR_3g092590 | 30.982 | 326 | 208 | 6 | 197 | 505 | 58 | 383 | 3.13e-38 | 149 |
| MS.gene051819.t1 | MTR_3g092590 | 30.675 | 326 | 209 | 6 | 197 | 505 | 58 | 383 | 4.76e-38 | 150 |
| MS.gene051819.t1 | MTR_7g017330 | 31.757 | 296 | 184 | 7 | 226 | 504 | 96 | 390 | 8.95e-37 | 146 |
| MS.gene051819.t1 | MTR_7g064210 | 43.023 | 172 | 79 | 5 | 345 | 503 | 25 | 190 | 9.36e-34 | 134 |
| MS.gene051819.t1 | MTR_1g007390 | 29.217 | 332 | 212 | 7 | 197 | 505 | 58 | 389 | 1.81e-31 | 130 |
| MS.gene051819.t1 | MTR_1g101985 | 46.078 | 102 | 55 | 0 | 201 | 302 | 61 | 162 | 1.53e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051819.t1 | AT5G35570 | 70.047 | 641 | 152 | 7 | 10 | 618 | 9 | 641 | 0.0 | 901 |
| MS.gene051819.t1 | AT2G37980 | 66.187 | 417 | 141 | 0 | 201 | 617 | 199 | 615 | 0.0 | 618 |
| MS.gene051819.t1 | AT3G54100 | 51.180 | 551 | 247 | 5 | 75 | 617 | 75 | 611 | 0.0 | 597 |
| MS.gene051819.t1 | AT5G01100 | 61.593 | 427 | 160 | 2 | 196 | 619 | 185 | 610 | 0.0 | 582 |
| MS.gene051819.t1 | AT1G14020 | 50.505 | 396 | 189 | 5 | 228 | 618 | 91 | 484 | 4.69e-139 | 415 |
| MS.gene051819.t1 | AT5G15740 | 50.513 | 390 | 184 | 5 | 229 | 611 | 107 | 494 | 1.73e-133 | 400 |
| MS.gene051819.t1 | AT2G03280 | 48.974 | 390 | 192 | 5 | 228 | 611 | 88 | 476 | 6.60e-130 | 390 |
| MS.gene051819.t1 | AT1G22460 | 44.907 | 432 | 227 | 6 | 201 | 623 | 134 | 563 | 1.72e-128 | 390 |
| MS.gene051819.t1 | AT3G02250 | 48.724 | 392 | 192 | 5 | 227 | 611 | 105 | 494 | 3.81e-128 | 387 |
| MS.gene051819.t1 | AT5G64600 | 44.780 | 431 | 225 | 6 | 200 | 620 | 90 | 517 | 9.17e-126 | 381 |
| MS.gene051819.t1 | AT2G03280 | 45.803 | 417 | 192 | 6 | 228 | 611 | 88 | 503 | 1.17e-123 | 375 |
| MS.gene051819.t1 | AT5G63390 | 38.009 | 442 | 257 | 8 | 190 | 623 | 122 | 554 | 3.99e-93 | 298 |
| MS.gene051819.t1 | AT1G20550 | 37.923 | 443 | 244 | 12 | 186 | 618 | 69 | 490 | 1.91e-88 | 286 |
| MS.gene051819.t1 | AT3G26370 | 37.621 | 412 | 227 | 9 | 227 | 619 | 157 | 557 | 7.53e-88 | 284 |
| MS.gene051819.t1 | AT1G76270 | 38.283 | 431 | 237 | 12 | 199 | 618 | 75 | 487 | 1.57e-87 | 283 |
| MS.gene051819.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.80e-87 | 282 |
| MS.gene051819.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.80e-87 | 282 |
| MS.gene051819.t1 | AT4G38390 | 37.241 | 435 | 248 | 10 | 199 | 623 | 92 | 511 | 1.81e-86 | 280 |
| MS.gene051819.t1 | AT1G04910 | 36.703 | 455 | 246 | 12 | 174 | 618 | 53 | 475 | 5.47e-85 | 275 |
| MS.gene051819.t1 | AT2G44500 | 37.011 | 435 | 253 | 10 | 199 | 623 | 144 | 567 | 5.89e-84 | 274 |
| MS.gene051819.t1 | AT1G35510 | 33.929 | 560 | 317 | 15 | 79 | 618 | 31 | 557 | 2.57e-83 | 272 |
| MS.gene051819.t1 | AT1G14970 | 35.714 | 448 | 254 | 12 | 195 | 622 | 4 | 437 | 3.10e-82 | 266 |
| MS.gene051819.t1 | AT3G07900 | 34.182 | 550 | 297 | 19 | 105 | 617 | 51 | 572 | 3.78e-82 | 270 |
| MS.gene051819.t1 | AT1G14970 | 37.440 | 414 | 229 | 10 | 228 | 622 | 9 | 411 | 3.99e-82 | 265 |
| MS.gene051819.t1 | AT5G65470 | 35.637 | 463 | 243 | 13 | 196 | 617 | 54 | 502 | 1.49e-81 | 266 |
| MS.gene051819.t1 | AT4G24530 | 35.217 | 460 | 247 | 11 | 198 | 619 | 72 | 518 | 2.96e-81 | 266 |
| MS.gene051819.t1 | AT1G14970 | 35.892 | 443 | 250 | 12 | 200 | 622 | 129 | 557 | 2.35e-80 | 265 |
| MS.gene051819.t1 | AT1G38065 | 36.721 | 433 | 243 | 13 | 206 | 617 | 6 | 428 | 2.79e-80 | 261 |
| MS.gene051819.t1 | AT1G38065 | 37.046 | 413 | 231 | 11 | 226 | 617 | 34 | 438 | 3.43e-80 | 261 |
| MS.gene051819.t1 | AT1G38131 | 36.042 | 480 | 261 | 17 | 170 | 617 | 92 | 557 | 3.19e-79 | 262 |
| MS.gene051819.t1 | AT2G01480 | 37.108 | 415 | 231 | 10 | 227 | 622 | 153 | 556 | 2.30e-78 | 259 |
| MS.gene051819.t1 | AT2G01480 | 39.394 | 363 | 198 | 8 | 227 | 570 | 153 | 512 | 1.64e-73 | 245 |
| MS.gene051819.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.91e-63 | 217 |
| MS.gene051819.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.91e-63 | 217 |
| MS.gene051819.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 160 | 610 | 2.45e-62 | 218 |
| MS.gene051819.t1 | AT1G62330 | 30.480 | 479 | 264 | 13 | 193 | 617 | 186 | 649 | 7.03e-62 | 217 |
| MS.gene051819.t1 | AT1G11990 | 32.579 | 442 | 257 | 13 | 201 | 617 | 163 | 588 | 2.03e-60 | 212 |
| MS.gene051819.t1 | AT1G52630 | 35.027 | 374 | 229 | 10 | 200 | 570 | 45 | 407 | 1.44e-59 | 206 |
| MS.gene051819.t1 | AT1G29200 | 32.870 | 432 | 232 | 11 | 233 | 618 | 1 | 420 | 3.01e-58 | 202 |
| MS.gene051819.t1 | AT1G11990 | 29.352 | 494 | 271 | 14 | 186 | 617 | 133 | 610 | 8.16e-54 | 194 |
| MS.gene051819.t1 | AT2G44500 | 39.098 | 266 | 149 | 7 | 199 | 455 | 144 | 405 | 6.69e-50 | 179 |
| MS.gene051819.t1 | AT1G52630 | 33.939 | 330 | 205 | 9 | 243 | 570 | 1 | 319 | 8.64e-50 | 177 |
| MS.gene051819.t1 | AT3G26370 | 40.367 | 218 | 118 | 3 | 227 | 434 | 157 | 372 | 4.37e-48 | 173 |
| MS.gene051819.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 3.70e-38 | 150 |
| MS.gene051819.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 3.70e-38 | 150 |
| MS.gene051819.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.50e-37 | 147 |
| MS.gene051819.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.50e-37 | 147 |
Find 146 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTGCCCTTCATTTA+AGG | 0.061402 | 8.2:-7259421 | MS.gene051819:intron |
| CTTAGTTTCTGTATGGATTT+TGG | 0.094858 | 8.2:+7259536 | None:intergenic |
| GAATCCATTGCTGTAGATTT+TGG | 0.128439 | 8.2:-7262404 | MS.gene051819:CDS |
| TTGTGGGGTTTGTTTGTTTA+TGG | 0.153331 | 8.2:-7262336 | MS.gene051819:CDS |
| TCAGCTCCAGTTGAAGAATT+TGG | 0.157549 | 8.2:-7259482 | MS.gene051819:CDS |
| ATATATTTGTAGTGGCTTTA+AGG | 0.177091 | 8.2:-7260011 | MS.gene051819:intron |
| AGATCACTTTGTGCTGATTT+AGG | 0.226086 | 8.2:+7259600 | None:intergenic |
| TGTGGGGTTTGTTTGTTTAT+GGG | 0.262109 | 8.2:-7262335 | MS.gene051819:CDS |
| GAAGTTTCCCTCGGAGTTAA+TGG | 0.272926 | 8.2:+7259125 | None:intergenic |
| CTCTAACACTTCTTCCGATC+TGG | 0.279645 | 8.2:+7262517 | None:intergenic |
| TTACACTTACGATGGAAATA+TGG | 0.280890 | 8.2:-7258880 | MS.gene051819:CDS |
| TTATTACTTGTCTGGATTGA+TGG | 0.287803 | 8.2:+7258812 | None:intergenic |
| AAAGATATGCTTGCATTTAC+TGG | 0.303129 | 8.2:-7259266 | MS.gene051819:CDS |
| GCCTAAATCAGATGAGATTT+GGG | 0.307013 | 8.2:-7260634 | MS.gene051819:CDS |
| GTTACCTTGGACCAAGATAT+TGG | 0.310172 | 8.2:+7259884 | None:intergenic |
| TAAAAGCTTTCTTCTAGCTT+TGG | 0.313521 | 8.2:+7258530 | None:intergenic |
| TATATTCTTGTAAATGCTAA+TGG | 0.320383 | 8.2:-7260659 | MS.gene051819:CDS |
| GGCCTAAATCAGATGAGATT+TGG | 0.323892 | 8.2:-7260635 | MS.gene051819:CDS |
| TGGACGAAGGAAACATTTCT+TGG | 0.328674 | 8.2:-7258631 | MS.gene051819:CDS |
| ATGCATAACCAAGGGATCTT+TGG | 0.337730 | 8.2:+7261065 | None:intergenic |
| TTATGAATTTATTACTTGTC+TGG | 0.340259 | 8.2:+7258804 | None:intergenic |
| AGAACCTCTGTCTTGTAATA+AGG | 0.342668 | 8.2:+7259629 | None:intergenic |
| GCTCACGACGGCGGCGCCGC+TGG | 0.353800 | 8.2:+7262589 | None:intergenic |
| CCCCAAATCTCATCTGATTT+AGG | 0.364358 | 8.2:+7260633 | None:intergenic |
| CATGTTTCTCAGAGAGTTCA+TGG | 0.366893 | 8.2:-7262461 | MS.gene051819:CDS |
| ATATTCTTGTAAATGCTAAT+GGG | 0.370728 | 8.2:-7260658 | MS.gene051819:CDS |
| TTGTTTCCAAATTCTTCAAC+TGG | 0.375807 | 8.2:+7259476 | None:intergenic |
| CTCTTGATCATACCTCGTAC+TGG | 0.377344 | 8.2:-7260472 | MS.gene051819:CDS |
| GTTCTTAAGATTTGTGCTAC+TGG | 0.378409 | 8.2:-7262311 | MS.gene051819:CDS |
| GCTGGCGTTGTTGCGTTTGA+AGG | 0.378895 | 8.2:+7262607 | None:intergenic |
| ATTTCACTCATACTGATTCC+CGG | 0.381505 | 8.2:-7259577 | MS.gene051819:CDS |
| ATTTGTGCTACTGGTTGGCT+TGG | 0.404875 | 8.2:-7262302 | MS.gene051819:CDS |
| ACGGCATCTTAGTTTCTGTA+TGG | 0.405367 | 8.2:+7259529 | None:intergenic |
| GATCCCTTGGTTATGCATAT+AGG | 0.412263 | 8.2:-7261060 | MS.gene051819:CDS |
| TTGATGCCAGATATGTGATA+TGG | 0.414143 | 8.2:-7260537 | MS.gene051819:intron |
| GATGTATTTGTGAAACAAAA+AGG | 0.414230 | 8.2:-7258490 | MS.gene051819:CDS |
| TGAAGAATTTGGAAACAAAC+TGG | 0.414484 | 8.2:-7259471 | MS.gene051819:CDS |
| GAGGAATGAGAGAAAATGTT+GGG | 0.415495 | 8.2:+7258999 | None:intergenic |
| CAAAGGCTGTACAAGGTCAT+AGG | 0.418033 | 8.2:-7258857 | MS.gene051819:CDS |
| TCTCCCGACTCTCTTAGATA+TGG | 0.420573 | 8.2:+7258557 | None:intergenic |
| AGCGGCGCCGCCGTCGTGAG+CGG | 0.421522 | 8.2:-7262587 | MS.gene051819:CDS |
| GGCGCCGCCGTCGTGAGCGG+CGG | 0.429371 | 8.2:-7262584 | MS.gene051819:CDS |
| CTTAAATGAAGGGCAAGATA+AGG | 0.435686 | 8.2:+7259422 | None:intergenic |
| TGATGACCATGCTTCGAAAC+AGG | 0.444891 | 8.2:+7262494 | None:intergenic |
| TTATTCAGGAATCAGAAGTC+TGG | 0.451320 | 8.2:-7260860 | MS.gene051819:intron |
| ACTCTAAAGACGGTAGAAAC+AGG | 0.453735 | 8.2:-7261013 | MS.gene051819:CDS |
| AGTTCATGGTGGAGTTGTGA+AGG | 0.456224 | 8.2:-7262447 | MS.gene051819:CDS |
| GTGGTAATGTCTCTACTATA+TGG | 0.459710 | 8.2:+7259942 | None:intergenic |
| AACTCCATCGGAATTTGATT+CGG | 0.464402 | 8.2:+7262685 | None:intergenic |
| TTAAGATTTGTGCTACTGGT+TGG | 0.473916 | 8.2:-7262307 | MS.gene051819:CDS |
| ACCAAGTGCTCTAAGTAGTA+AGG | 0.476802 | 8.2:+7259103 | None:intergenic |
| AGAGGAATGAGAGAAAATGT+TGG | 0.478418 | 8.2:+7258998 | None:intergenic |
| ATTTAGATTATCAATTCCAT+TGG | 0.478712 | 8.2:+7261096 | None:intergenic |
| TGCGCCGCCGCTCACGACGG+CGG | 0.479810 | 8.2:+7262580 | None:intergenic |
| TCTAACACTTCTTCCGATCT+GGG | 0.482101 | 8.2:+7262518 | None:intergenic |
| TCCTTACTACTTAGAGCACT+TGG | 0.482113 | 8.2:-7259104 | MS.gene051819:CDS |
| TTCTAGAGAGATCGATACAT+TGG | 0.484943 | 8.2:+7260811 | None:intergenic |
| GTCAACAGTCCACGTTTCTC+CGG | 0.492159 | 8.2:-7262653 | MS.gene051819:CDS |
| ACCAGGATTTACCTCGTAGC+TGG | 0.496065 | 8.2:-7259068 | MS.gene051819:CDS |
| GACTGAGCACGGCGAGTCAT+CGG | 0.499416 | 8.2:+7262629 | None:intergenic |
| CACTTTGTGCTGATTTAGGA+GGG | 0.499730 | 8.2:+7259604 | None:intergenic |
| AATGCCATTGTTAGCAAGCC+GGG | 0.500019 | 8.2:+7259559 | None:intergenic |
| ATGTAACTTACCTTAAATGA+AGG | 0.501429 | 8.2:+7259411 | None:intergenic |
| AATCATCAAAACATGTTGGC+TGG | 0.502313 | 8.2:-7258942 | MS.gene051819:CDS |
| TGTTAAACTTGTTGATCAGT+TGG | 0.504716 | 8.2:-7258651 | MS.gene051819:CDS |
| CTCGTAGCTGGAGAAGCATA+TGG | 0.507275 | 8.2:-7259056 | MS.gene051819:CDS |
| TCCAGCTACGAGGTAAATCC+TGG | 0.509294 | 8.2:+7259067 | None:intergenic |
| GCTGGAGAAGCATATGGAAG+AGG | 0.516557 | 8.2:-7259050 | MS.gene051819:CDS |
| GCTCCATATCTAAGAGAGTC+GGG | 0.517325 | 8.2:-7258560 | MS.gene051819:CDS |
| ACATTACCACCTACCTATGC+TGG | 0.518139 | 8.2:-7259929 | MS.gene051819:CDS |
| TCTAGAGAGATCGATACATT+GGG | 0.518334 | 8.2:+7260812 | None:intergenic |
| TTAGAGCCTGTTTCGAAGCA+TGG | 0.520711 | 8.2:-7262500 | MS.gene051819:CDS |
| GCTTTAAGGATTTGTTTGAC+TGG | 0.524080 | 8.2:-7259997 | MS.gene051819:CDS |
| TGCGATATGAAGTTGGTCAC+TGG | 0.528729 | 8.2:-7259196 | MS.gene051819:CDS |
| GAATGCCATTGTTAGCAAGC+CGG | 0.531220 | 8.2:+7259558 | None:intergenic |
| CAAGAATCATCAAAACATGT+TGG | 0.532621 | 8.2:-7258946 | MS.gene051819:CDS |
| TCACTTTGTGCTGATTTAGG+AGG | 0.533556 | 8.2:+7259603 | None:intergenic |
| CTAGTGGACCAAAGATCCCT+TGG | 0.537712 | 8.2:-7261073 | MS.gene051819:CDS |
| AAGAGATTAATGGGACTGAA+AGG | 0.537759 | 8.2:-7259166 | MS.gene051819:CDS |
| AAATCCAAAATCTACAGCAA+TGG | 0.538935 | 8.2:+7262400 | None:intergenic |
| AAGAAATACGTCACTCTGAA+GGG | 0.538954 | 8.2:+7258902 | None:intergenic |
| TTTGTTTCACAAATACATCC+TGG | 0.544979 | 8.2:+7258494 | None:intergenic |
| TCTTGATCATACCTCGTACT+GGG | 0.547240 | 8.2:-7260471 | MS.gene051819:CDS |
| GTTCATGGTGGAGTTGTGAA+GGG | 0.550601 | 8.2:-7262446 | MS.gene051819:CDS |
| TATTCTTGTAAATGCTAATG+GGG | 0.555729 | 8.2:-7260657 | MS.gene051819:CDS |
| AAAGAAATACGTCACTCTGA+AGG | 0.556265 | 8.2:+7258901 | None:intergenic |
| GAGTGCGCCGCCGCTCACGA+CGG | 0.556672 | 8.2:+7262577 | None:intergenic |
| GACTCGCTGTGAAACTCCAT+CGG | 0.558940 | 8.2:+7262673 | None:intergenic |
| AGGCAGATGCGATATGAAGT+TGG | 0.559121 | 8.2:-7259203 | MS.gene051819:CDS |
| AACTCCAATATCTTGGTCCA+AGG | 0.559526 | 8.2:-7259888 | MS.gene051819:intron |
| AATTGATAATCTAAATCTAG+TGG | 0.566115 | 8.2:-7261089 | MS.gene051819:CDS |
| TGCGTTTGAAGGACTGAGCA+CGG | 0.566234 | 8.2:+7262618 | None:intergenic |
| GCAAATCAACTCACCCAGAT+CGG | 0.567377 | 8.2:-7262531 | MS.gene051819:CDS |
| GTATCTAGAATGCAGCAGAA+TGG | 0.567600 | 8.2:-7259449 | MS.gene051819:CDS |
| GTATTTCTTTACACTTACGA+TGG | 0.568480 | 8.2:-7258888 | MS.gene051819:CDS |
| AATATGGCAAAGGCTGTACA+AGG | 0.568533 | 8.2:-7258864 | MS.gene051819:CDS |
| TGTAACTTACCTTAAATGAA+GGG | 0.580244 | 8.2:+7259412 | None:intergenic |
| AGGTAAATCCTGGTGTGTGA+TGG | 0.580546 | 8.2:+7259077 | None:intergenic |
| TGCTCCATATCTAAGAGAGT+CGG | 0.582757 | 8.2:-7258561 | MS.gene051819:CDS |
| ACTGAAAGGAGATTGCTTGG+TGG | 0.582839 | 8.2:-7259152 | MS.gene051819:CDS |
| GGGACTGAAAGGAGATTGCT+TGG | 0.582857 | 8.2:-7259155 | MS.gene051819:CDS |
| TGCTGTTGCTAAGATTATGA+AGG | 0.586237 | 8.2:-7260513 | MS.gene051819:CDS |
| CAGGAACTATCTGACTCCAA+TGG | 0.586261 | 8.2:-7261112 | MS.gene051819:CDS |
| CCTCGTACTGGGCTGATCAG+AGG | 0.593327 | 8.2:-7260460 | MS.gene051819:intron |
| TCACAAATACATCCTGGCAG+AGG | 0.595231 | 8.2:+7258500 | None:intergenic |
| ACGGTAGAAACAGGAGTAGG+TGG | 0.604533 | 8.2:-7261004 | MS.gene051819:CDS |
| CTTGTTGATCAGTTGGACGA+AGG | 0.609235 | 8.2:-7258644 | MS.gene051819:CDS |
| TATGCATATAGGAGTCAAGA+AGG | 0.609346 | 8.2:-7261049 | MS.gene051819:CDS |
| ATTTACAAGAATATATCCGT+TGG | 0.609999 | 8.2:+7260667 | None:intergenic |
| GAGTTCTCACTTTAGCAGTG+TGG | 0.611281 | 8.2:+7260978 | None:intergenic |
| TACGAGGTATGATCAAGAGA+AGG | 0.612224 | 8.2:+7260476 | None:intergenic |
| GAACGGCTGAATTCCAGCAT+AGG | 0.612438 | 8.2:+7259916 | None:intergenic |
| TAGGAGTCAAGAAGGAGATG+TGG | 0.612654 | 8.2:-7261041 | MS.gene051819:CDS |
| CATGAACTCTCTGAGAAACA+TGG | 0.613005 | 8.2:+7262462 | None:intergenic |
| TTCTCCGAATCAAATTCCGA+TGG | 0.615595 | 8.2:-7262689 | MS.gene051819:CDS |
| ATATGAAGTTGGTCACTGGA+AGG | 0.616768 | 8.2:-7259192 | MS.gene051819:CDS |
| AGGAATGAGAGAAAATGTTG+GGG | 0.617224 | 8.2:+7259000 | None:intergenic |
| TTCAAACGCAACAACGCCAG+CGG | 0.618988 | 8.2:-7262605 | MS.gene051819:CDS |
| AGTAGTAAGGAAGTTTCCCT+CGG | 0.625299 | 8.2:+7259116 | None:intergenic |
| TGGCTGTCCATTAACTCCGA+GGG | 0.625425 | 8.2:-7259132 | MS.gene051819:CDS |
| TTAGATATGGAGCACCGTCA+CGG | 0.628621 | 8.2:+7258570 | None:intergenic |
| GACTCCTATATGCATAACCA+AGG | 0.629127 | 8.2:+7261056 | None:intergenic |
| ACTTTGTGCTGATTTAGGAG+GGG | 0.633477 | 8.2:+7259605 | None:intergenic |
| GATTCCCGGCTTGCTAACAA+TGG | 0.643017 | 8.2:-7259563 | MS.gene051819:CDS |
| TCTACAGCAATGGATTCAAG+TGG | 0.648308 | 8.2:+7262410 | None:intergenic |
| TCAATGCTCTGTAGTTTACA+CGG | 0.649185 | 8.2:+7259510 | None:intergenic |
| AGCACGGCGAGTCATCGGAC+CGG | 0.656467 | 8.2:+7262634 | None:intergenic |
| GGTTCCTTATTACAAGACAG+AGG | 0.658750 | 8.2:-7259633 | MS.gene051819:CDS |
| CTCATCTTCAGAAGACAGAG+AGG | 0.659368 | 8.2:+7258980 | None:intergenic |
| GTCATCGGACCGGAGAAACG+TGG | 0.662543 | 8.2:+7262644 | None:intergenic |
| CCTCTGATCAGCCCAGTACG+AGG | 0.668444 | 8.2:+7260460 | None:intergenic |
| TGAATTCCAGCATAGGTAGG+TGG | 0.669854 | 8.2:+7259923 | None:intergenic |
| ACTCCTATATGCATAACCAA+GGG | 0.670117 | 8.2:+7261057 | None:intergenic |
| TTACGATGGAAATATGGCAA+AGG | 0.670267 | 8.2:-7258874 | MS.gene051819:CDS |
| GTGCTAGATGCAAAGACCAA+CGG | 0.675801 | 8.2:-7260683 | MS.gene051819:CDS |
| GTGGCTGTCCATTAACTCCG+AGG | 0.677303 | 8.2:-7259133 | MS.gene051819:CDS |
| AAGACGGTAGAAACAGGAGT+AGG | 0.677819 | 8.2:-7261007 | MS.gene051819:CDS |
| AGGAAGTATGAAATATCTCG+AGG | 0.678236 | 8.2:-7259030 | MS.gene051819:CDS |
| GGCTGAATTCCAGCATAGGT+AGG | 0.679350 | 8.2:+7259920 | None:intergenic |
| ATTCTTGTAAATGCTAATGG+GGG | 0.683438 | 8.2:-7260656 | MS.gene051819:CDS |
| TGTGGAACGAACTCTAAAGA+CGG | 0.684864 | 8.2:-7261023 | MS.gene051819:CDS |
| CAGAAGAAGATGAAGAACTG+AGG | 0.686563 | 8.2:-7259223 | MS.gene051819:CDS |
| CCTAAATCAGATGAGATTTG+GGG | 0.710208 | 8.2:-7260633 | MS.gene051819:intron |
| CATATGCTTCTCCAGCTACG+AGG | 0.722282 | 8.2:+7259057 | None:intergenic |
| AAACTTCATAGAGACCGTGA+CGG | 0.726293 | 8.2:-7258584 | MS.gene051819:CDS |
| GTTTCTCAGAGAGTTCATGG+TGG | 0.759850 | 8.2:-7262458 | MS.gene051819:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTTACTTTTTATC+AGG | - | chr8.2:7260048-7260067 | MS.gene051819:intron | 10.0% |
| !! | AATTTATAGTGTTTATTTAC+AGG | - | chr8.2:7261525-7261544 | MS.gene051819:intron | 15.0% |
| !! | AGTAAAATAATTTACTTAGT+AGG | + | chr8.2:7260041-7260060 | None:intergenic | 15.0% |
| !! | TTTAACAATGTTTCAAATTA+CGG | - | chr8.2:7261496-7261515 | MS.gene051819:intron | 15.0% |
| !!! | AATTTGAAACATTGTTAAAA+GGG | + | chr8.2:7261495-7261514 | None:intergenic | 15.0% |
| !!! | TAATTTGAAACATTGTTAAA+AGG | + | chr8.2:7261496-7261515 | None:intergenic | 15.0% |
| !! | AAAAAATTATTGAAAGTGAG+TGG | + | chr8.2:7260471-7260490 | None:intergenic | 20.0% |
| !! | AAATCTTGTATCAACTAATA+TGG | + | chr8.2:7260850-7260869 | None:intergenic | 20.0% |
| !! | AATATTTAAGCACTTCAAAA+TGG | + | chr8.2:7259175-7259194 | None:intergenic | 20.0% |
| !! | AGAATTAGATAGATCATTAT+CGG | - | chr8.2:7259605-7259624 | MS.gene051819:CDS | 20.0% |
| !! | AGCTATCTTATTAGTTATAA+TGG | - | chr8.2:7259461-7259480 | MS.gene051819:CDS | 20.0% |
| !! | ATAACTAATAAGATAGCTAT+GGG | + | chr8.2:7259459-7259478 | None:intergenic | 20.0% |
| !! | ATATTCTTGTAAATGCTAAT+GGG | - | chr8.2:7260521-7260540 | MS.gene051819:CDS | 20.0% |
| !! | ATTTAGATTATCAATTCCAT+TGG | + | chr8.2:7260086-7260105 | None:intergenic | 20.0% |
| !! | CTATCTTATTAGTTATAATG+GGG | - | chr8.2:7259463-7259482 | MS.gene051819:CDS | 20.0% |
| !! | GCTATCTTATTAGTTATAAT+GGG | - | chr8.2:7259462-7259481 | MS.gene051819:CDS | 20.0% |
| !! | TATAACTAATAAGATAGCTA+TGG | + | chr8.2:7259460-7259479 | None:intergenic | 20.0% |
| !! | TATATTCTTGTAAATGCTAA+TGG | - | chr8.2:7260520-7260539 | MS.gene051819:CDS | 20.0% |
| !! | TCTGATGTTATATTATAAGA+AGG | - | chr8.2:7260584-7260603 | MS.gene051819:intron | 20.0% |
| !! | TTATGAATTTATTACTTGTC+TGG | + | chr8.2:7262378-7262397 | None:intergenic | 20.0% |
| !! | TTGTTTCAATATATTTGTAG+TGG | - | chr8.2:7261160-7261179 | MS.gene051819:intron | 20.0% |
| !!! | AATTGATAATCTAAATCTAG+TGG | - | chr8.2:7260090-7260109 | MS.gene051819:intron | 20.0% |
| !!! | AGAGTTCTGTTTTTTTTTTT+TGG | - | chr8.2:7259017-7259036 | MS.gene051819:CDS | 20.0% |
| !!! | GTTTTTGTTTTTGGATTTTA+TGG | - | chr8.2:7259127-7259146 | MS.gene051819:CDS | 20.0% |
| ! | AAACAAAAGAAAGTAATGCA+AGG | + | chr8.2:7259982-7260001 | None:intergenic | 25.0% |
| ! | AATGATGTTTATGACACATA+AGG | + | chr8.2:7261424-7261443 | None:intergenic | 25.0% |
| ! | ATAATACAATTGAATCCACA+TGG | - | chr8.2:7261804-7261823 | MS.gene051819:intron | 25.0% |
| ! | ATGTAACTTACCTTAAATGA+AGG | + | chr8.2:7261771-7261790 | None:intergenic | 25.0% |
| ! | ATGTTATATTATAAGAAGGC+AGG | - | chr8.2:7260588-7260607 | MS.gene051819:intron | 25.0% |
| ! | ATTGAAAATACGAAAACACT+TGG | + | chr8.2:7259827-7259846 | None:intergenic | 25.0% |
| ! | ATTTACAAGAATATATCCGT+TGG | + | chr8.2:7260515-7260534 | None:intergenic | 25.0% |
| ! | CAAATTGTGAAAATTCCAAA+TGG | - | chr8.2:7259887-7259906 | MS.gene051819:intron | 25.0% |
| ! | CATTGAAATCAGTTTATACT+GGG | + | chr8.2:7262487-7262506 | None:intergenic | 25.0% |
| ! | GATGTATTTGTGAAACAAAA+AGG | - | chr8.2:7262689-7262708 | MS.gene051819:CDS | 25.0% |
| ! | GTATATCCAAACAAACATTA+AGG | + | chr8.2:7259652-7259671 | None:intergenic | 25.0% |
| ! | GTCAAAAAAGCTAAATTTCT+AGG | + | chr8.2:7260942-7260961 | None:intergenic | 25.0% |
| ! | TAATCTATATCTCAAGTTTG+TGG | - | chr8.2:7260224-7260243 | MS.gene051819:intron | 25.0% |
| ! | TATTCTTGTAAATGCTAATG+GGG | - | chr8.2:7260522-7260541 | MS.gene051819:CDS | 25.0% |
| ! | TGTAACTTACCTTAAATGAA+GGG | + | chr8.2:7261770-7261789 | None:intergenic | 25.0% |
| !! | ATATATTTGTAGTGGCTTTA+AGG | - | chr8.2:7261168-7261187 | MS.gene051819:intron | 25.0% |
| !! | ATTGAATAAATTTTGAGCAC+AGG | + | chr8.2:7261326-7261345 | None:intergenic | 25.0% |
| !! | TAAATGGTATGTTCACATTT+TGG | + | chr8.2:7259561-7259580 | None:intergenic | 25.0% |
| !! | TTGCATTACTTTCTTTTGTT+TGG | - | chr8.2:7259981-7260000 | MS.gene051819:CDS | 25.0% |
| !! | TTTTGGATTTTATGGTGTTT+TGG | - | chr8.2:7259135-7259154 | MS.gene051819:CDS | 25.0% |
| !!! | AAGTTTGCTGTTTTTGTTTT+TGG | - | chr8.2:7259118-7259137 | MS.gene051819:CDS | 25.0% |
| !!! | ATAAGATTGAGCTTTTTCAA+TGG | + | chr8.2:7258908-7258927 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATGATTCTTGAA+AGG | + | chr8.2:7262231-7262250 | None:intergenic | 25.0% |
| !!! | ATTTGTTTGGTTTTCAATGT+AGG | - | chr8.2:7260252-7260271 | MS.gene051819:intron | 25.0% |
| !!! | CAAAGTTTGCTTTTTTATTC+AGG | - | chr8.2:7260305-7260324 | MS.gene051819:intron | 25.0% |
| !!! | CATTTGGAATTTTCACAATT+TGG | + | chr8.2:7259889-7259908 | None:intergenic | 25.0% |
| !!! | TGCATTACTTTCTTTTGTTT+GGG | - | chr8.2:7259982-7260001 | MS.gene051819:CDS | 25.0% |
| !!! | TGTGGAATTTTTTTTGACAT+TGG | + | chr8.2:7261458-7261477 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGTAATTAGTGTG+TGG | - | chr8.2:7259031-7259050 | MS.gene051819:CDS | 25.0% |
| AAAGATATGCTTGCATTTAC+TGG | - | chr8.2:7261913-7261932 | MS.gene051819:intron | 30.0% | |
| AAATCCAAAATCTACAGCAA+TGG | + | chr8.2:7258782-7258801 | None:intergenic | 30.0% | |
| AAATTATTGAAAGTGAGTGG+AGG | + | chr8.2:7260468-7260487 | None:intergenic | 30.0% | |
| AACAAAGAAGAGATAGAGTA+AGG | + | chr8.2:7261882-7261901 | None:intergenic | 30.0% | |
| AATTATTGAAAGTGAGTGGA+GGG | + | chr8.2:7260467-7260486 | None:intergenic | 30.0% | |
| ATTCTTGTAAATGCTAATGG+GGG | - | chr8.2:7260523-7260542 | MS.gene051819:CDS | 30.0% | |
| ATTGTATCTTACACTGCAAA+GGG | - | chr8.2:7258951-7258970 | MS.gene051819:CDS | 30.0% | |
| CAAGAATCATCAAAACATGT+TGG | - | chr8.2:7262233-7262252 | MS.gene051819:intron | 30.0% | |
| CCATTGAAATCAGTTTATAC+TGG | + | chr8.2:7262488-7262507 | None:intergenic | 30.0% | |
| CTATAACATCATGCTTTGTA+TGG | - | chr8.2:7259083-7259102 | MS.gene051819:CDS | 30.0% | |
| CTATATAAAGACAAGATGGA+TGG | + | chr8.2:7261377-7261396 | None:intergenic | 30.0% | |
| CTTTCTTACCTCTTTAGATT+TGG | - | chr8.2:7260753-7260772 | MS.gene051819:intron | 30.0% | |
| GAAAACTAGTTATAGCTTTC+TGG | + | chr8.2:7261049-7261068 | None:intergenic | 30.0% | |
| GAACATACCATTTAGTAGTA+GGG | - | chr8.2:7259567-7259586 | MS.gene051819:CDS | 30.0% | |
| GATCTCATTATAAATCCATG+TGG | + | chr8.2:7261822-7261841 | None:intergenic | 30.0% | |
| GGAAGGAAAAAGAGATTAAT+GGG | - | chr8.2:7262004-7262023 | MS.gene051819:intron | 30.0% | |
| GTATTTCTTTACACTTACGA+TGG | - | chr8.2:7262291-7262310 | MS.gene051819:CDS | 30.0% | |
| TACAAAGCATGATGTTATAG+TGG | + | chr8.2:7259083-7259102 | None:intergenic | 30.0% | |
| TAGAGTAAGGTGATTAGAAA+TGG | + | chr8.2:7261869-7261888 | None:intergenic | 30.0% | |
| TCTCAAAAACTCCAATATCT+TGG | - | chr8.2:7261284-7261303 | MS.gene051819:intron | 30.0% | |
| TGAAAAAGCTCAATCTTATC+AGG | - | chr8.2:7258909-7258928 | MS.gene051819:CDS | 30.0% | |
| TGAACATACCATTTAGTAGT+AGG | - | chr8.2:7259566-7259585 | MS.gene051819:CDS | 30.0% | |
| TGAAGAATTTGGAAACAAAC+TGG | - | chr8.2:7261708-7261727 | MS.gene051819:intron | 30.0% | |
| TGGAAGGAAAAAGAGATTAA+TGG | - | chr8.2:7262003-7262022 | MS.gene051819:intron | 30.0% | |
| TGTGAAAATTCCAAATGGTA+GGG | - | chr8.2:7259892-7259911 | MS.gene051819:CDS | 30.0% | |
| TTACACTTACGATGGAAATA+TGG | - | chr8.2:7262299-7262318 | MS.gene051819:CDS | 30.0% | |
| TTATATTATAAGAAGGCAGG+CGG | - | chr8.2:7260591-7260610 | MS.gene051819:intron | 30.0% | |
| TTATTACTTGTCTGGATTGA+TGG | + | chr8.2:7262370-7262389 | None:intergenic | 30.0% | |
| TTGTGAAAATTCCAAATGGT+AGG | - | chr8.2:7259891-7259910 | MS.gene051819:CDS | 30.0% | |
| TTGTTTCCAAATTCTTCAAC+TGG | + | chr8.2:7261706-7261725 | None:intergenic | 30.0% | |
| TTTAGAGAGAAGAAAAAGCT+TGG | - | chr8.2:7258799-7258818 | MS.gene051819:intron | 30.0% | |
| TTTGTTTCACAAATACATCC+TGG | + | chr8.2:7262688-7262707 | None:intergenic | 30.0% | |
| ! | ACAATCATCCCAACTTTTAA+AGG | - | chr8.2:7261009-7261028 | MS.gene051819:CDS | 30.0% |
| ! | ACACCATACCAACTTTTATA+TGG | - | chr8.2:7259789-7259808 | MS.gene051819:intron | 30.0% |
| ! | ATGCTTTTATGCAATCAACT+AGG | - | chr8.2:7259374-7259393 | MS.gene051819:intron | 30.0% |
| ! | CAATCATCCCAACTTTTAAA+GGG | - | chr8.2:7261010-7261029 | MS.gene051819:CDS | 30.0% |
| ! | CAATCTTCCCTTTAAAAGTT+GGG | + | chr8.2:7261020-7261039 | None:intergenic | 30.0% |
| ! | CCAGTATAAACTGATTTCAA+TGG | - | chr8.2:7262485-7262504 | MS.gene051819:CDS | 30.0% |
| ! | CTTAGTTTCTGTATGGATTT+TGG | + | chr8.2:7261646-7261665 | None:intergenic | 30.0% |
| ! | CTTCTAACATGAAGTTTTTG+CGG | - | chr8.2:7262416-7262435 | MS.gene051819:CDS | 30.0% |
| ! | GCATTTTATTGATACACTGA+AGG | - | chr8.2:7261207-7261226 | MS.gene051819:intron | 30.0% |
| ! | TAAATTTTGAGCACAGGTTA+TGG | + | chr8.2:7261320-7261339 | None:intergenic | 30.0% |
| ! | TGTTAGTAATTTTTGTTGCG+TGG | - | chr8.2:7259345-7259364 | MS.gene051819:intron | 30.0% |
| !! | GATATTGGAGTTTTTGAGAA+CGG | + | chr8.2:7261283-7261302 | None:intergenic | 30.0% |
| !! | GCATTACTTTCTTTTGTTTG+GGG | - | chr8.2:7259983-7260002 | MS.gene051819:CDS | 30.0% |
| !! | GTTTGTGGACTTAATTTGTT+TGG | - | chr8.2:7260239-7260258 | MS.gene051819:intron | 30.0% |
| !! | TAAAAGCTTTCTTCTAGCTT+TGG | + | chr8.2:7262652-7262671 | None:intergenic | 30.0% |
| !! | TGTTAAACTTGTTGATCAGT+TGG | - | chr8.2:7262528-7262547 | MS.gene051819:CDS | 30.0% |
| !!! | AAAGGGTCAATTCAGTTTTT+TGG | - | chr8.2:7258968-7258987 | MS.gene051819:CDS | 30.0% |
| !!! | TCTATGAAGTTTTTTCACCT+TGG | + | chr8.2:7262587-7262606 | None:intergenic | 30.0% |
| AAAGAAATACGTCACTCTGA+AGG | + | chr8.2:7262281-7262300 | None:intergenic | 35.0% | |
| AACTCCATCGGAATTTGATT+CGG | + | chr8.2:7258497-7258516 | None:intergenic | 35.0% | |
| AAGAAATACGTCACTCTGAA+GGG | + | chr8.2:7262280-7262299 | None:intergenic | 35.0% | |
| AAGAGATTAATGGGACTGAA+AGG | - | chr8.2:7262013-7262032 | MS.gene051819:intron | 35.0% | |
| AATCATCAAAACATGTTGGC+TGG | - | chr8.2:7262237-7262256 | MS.gene051819:intron | 35.0% | |
| ACTCCTATATGCATAACCAA+GGG | + | chr8.2:7260125-7260144 | None:intergenic | 35.0% | |
| AGAACCTCTGTCTTGTAATA+AGG | + | chr8.2:7261553-7261572 | None:intergenic | 35.0% | |
| AGAAGAAAAAGCTTGGACAT+TGG | - | chr8.2:7258806-7258825 | MS.gene051819:intron | 35.0% | |
| AGAGGAATGAGAGAAAATGT+TGG | + | chr8.2:7262184-7262203 | None:intergenic | 35.0% | |
| AGGAATGAGAGAAAATGTTG+GGG | + | chr8.2:7262182-7262201 | None:intergenic | 35.0% | |
| AGGGATGCAATTATTTGATG+TGG | + | chr8.2:7261476-7261495 | None:intergenic | 35.0% | |
| AGTTTGGATCCATTTAACTG+TGG | - | chr8.2:7259693-7259712 | MS.gene051819:intron | 35.0% | |
| CCAATCATCCAAATCTAAAG+AGG | + | chr8.2:7260764-7260783 | None:intergenic | 35.0% | |
| CCATCTTGTCTTTATATAGC+CGG | - | chr8.2:7261378-7261397 | MS.gene051819:intron | 35.0% | |
| CCTAAATCAGATGAGATTTG+GGG | - | chr8.2:7260546-7260565 | MS.gene051819:intron | 35.0% | |
| CCTCTTTAGATTTGGATGAT+TGG | - | chr8.2:7260761-7260780 | MS.gene051819:intron | 35.0% | |
| CGGCTAAGTTGTTAAGTAAA+CGG | - | chr8.2:7261398-7261417 | MS.gene051819:intron | 35.0% | |
| CGTTTACTTAACAACTTAGC+CGG | + | chr8.2:7261400-7261419 | None:intergenic | 35.0% | |
| CTCAACTGCATAATAGGAAA+AGG | + | chr8.2:7260431-7260450 | None:intergenic | 35.0% | |
| CTTAAATGAAGGGCAAGATA+AGG | + | chr8.2:7261760-7261779 | None:intergenic | 35.0% | |
| CTTATCTTGCCCTTCATTTA+AGG | - | chr8.2:7261758-7261777 | MS.gene051819:intron | 35.0% | |
| GAGGAATGAGAGAAAATGTT+GGG | + | chr8.2:7262183-7262202 | None:intergenic | 35.0% | |
| GATCCATTTAACTGTGGAAA+TGG | - | chr8.2:7259699-7259718 | MS.gene051819:intron | 35.0% | |
| GATTGTATCTTACACTGCAA+AGG | - | chr8.2:7258950-7258969 | MS.gene051819:CDS | 35.0% | |
| GATTTACCACATTCTTGTTG+AGG | - | chr8.2:7261347-7261366 | MS.gene051819:intron | 35.0% | |
| GCCTAAATCAGATGAGATTT+GGG | - | chr8.2:7260545-7260564 | MS.gene051819:intron | 35.0% | |
| GGAATACTCAACTGCATAAT+AGG | + | chr8.2:7260437-7260456 | None:intergenic | 35.0% | |
| GGGATGATTGTCTAAAGAAA+AGG | + | chr8.2:7261000-7261019 | None:intergenic | 35.0% | |
| GTTAAATGGATCCAAACTTG+TGG | + | chr8.2:7259691-7259710 | None:intergenic | 35.0% | |
| GTTCTTAAGATTTGTGCTAC+TGG | - | chr8.2:7258868-7258887 | MS.gene051819:CDS | 35.0% | |
| GTTGTCCACCATATAAAAGT+TGG | + | chr8.2:7259800-7259819 | None:intergenic | 35.0% | |
| TACACGCCTTAATGTTTGTT+TGG | - | chr8.2:7259643-7259662 | MS.gene051819:intron | 35.0% | |
| TATGCATATAGGAGTCAAGA+AGG | - | chr8.2:7260130-7260149 | MS.gene051819:intron | 35.0% | |
| TCAATGCTCTGTAGTTTACA+CGG | + | chr8.2:7261672-7261691 | None:intergenic | 35.0% | |
| TCTAGAGAGATCGATACATT+GGG | + | chr8.2:7260370-7260389 | None:intergenic | 35.0% | |
| TCTCCATTTCCACAGTTAAA+TGG | + | chr8.2:7259705-7259724 | None:intergenic | 35.0% | |
| TGCTGTTGCTAAGATTATGA+AGG | - | chr8.2:7260666-7260685 | MS.gene051819:CDS | 35.0% | |
| TTACGATGGAAATATGGCAA+AGG | - | chr8.2:7262305-7262324 | MS.gene051819:CDS | 35.0% | |
| TTATTCAGGAATCAGAAGTC+TGG | - | chr8.2:7260319-7260338 | MS.gene051819:intron | 35.0% | |
| TTGATGCCAGATATGTGATA+TGG | - | chr8.2:7260642-7260661 | MS.gene051819:CDS | 35.0% | |
| ! | AGGAAGTATGAAATATCTCG+AGG | - | chr8.2:7262149-7262168 | MS.gene051819:intron | 35.0% |
| ! | CCATACCAACTTTTATATGG+TGG | - | chr8.2:7259792-7259811 | MS.gene051819:intron | 35.0% |
| ! | GAATCCATTGCTGTAGATTT+TGG | - | chr8.2:7258775-7258794 | MS.gene051819:intron | 35.0% |
| ! | GCAATCTTCCCTTTAAAAGT+TGG | + | chr8.2:7261021-7261040 | None:intergenic | 35.0% |
| ! | GTCATTTGTTAATGTGTGCA+AGG | - | chr8.2:7259201-7259220 | MS.gene051819:CDS | 35.0% |
| ! | GTGGTAATGTCTCTACTATA+TGG | + | chr8.2:7261240-7261259 | None:intergenic | 35.0% |
| ! | TATAATGGGGTGAAGAACTT+AGG | - | chr8.2:7259476-7259495 | MS.gene051819:CDS | 35.0% |
| ! | TGGGTGAAATTTTCACTGTT+GGG | + | chr8.2:7260351-7260370 | None:intergenic | 35.0% |
| ! | TGTGGGGTTTGTTTGTTTAT+GGG | - | chr8.2:7258844-7258863 | MS.gene051819:CDS | 35.0% |
| ! | TTAAGATTTGTGCTACTGGT+TGG | - | chr8.2:7258872-7258891 | MS.gene051819:CDS | 35.0% |
| ! | TTCTAGAGAGATCGATACAT+TGG | + | chr8.2:7260371-7260390 | None:intergenic | 35.0% |
| ! | TTGACTCGAAAAGTAAAAGC+TGG | + | chr8.2:7259263-7259282 | None:intergenic | 35.0% |
| ! | TTGGGTGAAATTTTCACTGT+TGG | + | chr8.2:7260352-7260371 | None:intergenic | 35.0% |
| ! | TTGTGGGGTTTGTTTGTTTA+TGG | - | chr8.2:7258843-7258862 | MS.gene051819:CDS | 35.0% |
| !! | ACTTTCTTTTGTTTGGGGAT+TGG | - | chr8.2:7259988-7260007 | MS.gene051819:CDS | 35.0% |
| !! | AGAAAAGGCTTTGAAATCGA+TGG | + | chr8.2:7260985-7261004 | None:intergenic | 35.0% |
| !! | AGATCACTTTGTGCTGATTT+AGG | + | chr8.2:7261582-7261601 | None:intergenic | 35.0% |
| !! | ATTTCACTCATACTGATTCC+CGG | - | chr8.2:7261602-7261621 | MS.gene051819:intron | 35.0% |
| !! | CCACCATATAAAAGTTGGTA+TGG | + | chr8.2:7259795-7259814 | None:intergenic | 35.0% |
| !! | GCTTTAAGGATTTGTTTGAC+TGG | - | chr8.2:7261182-7261201 | MS.gene051819:intron | 35.0% |
| !!! | GATGTTTTTGGTGTTTTGTG+GGG | - | chr8.2:7258828-7258847 | MS.gene051819:CDS | 35.0% |
| !!! | GGATGTTTTTGGTGTTTTGT+GGG | - | chr8.2:7258827-7258846 | MS.gene051819:CDS | 35.0% |
| !!! | TGGATGTTTTTGGTGTTTTG+TGG | - | chr8.2:7258826-7258845 | MS.gene051819:CDS | 35.0% |
| AAACTTCATAGAGACCGTGA+CGG | - | chr8.2:7262595-7262614 | MS.gene051819:CDS | 40.0% | |
| AAATGGATCCAAACTTGTGG+TGG | + | chr8.2:7259688-7259707 | None:intergenic | 40.0% | |
| AACTCCAATATCTTGGTCCA+AGG | - | chr8.2:7261291-7261310 | MS.gene051819:intron | 40.0% | |
| AATATGGCAAAGGCTGTACA+AGG | - | chr8.2:7262315-7262334 | MS.gene051819:CDS | 40.0% | |
| AATTCCAAATGGTAGGGAGA+TGG | - | chr8.2:7259898-7259917 | MS.gene051819:CDS | 40.0% | |
| ACGGCATCTTAGTTTCTGTA+TGG | + | chr8.2:7261653-7261672 | None:intergenic | 40.0% | |
| AGTAGTAAGGAAGTTTCCCT+CGG | + | chr8.2:7262066-7262085 | None:intergenic | 40.0% | |
| ATGCATAACCAAGGGATCTT+TGG | + | chr8.2:7260117-7260136 | None:intergenic | 40.0% | |
| CAGAAGAAGATGAAGAACTG+AGG | - | chr8.2:7261956-7261975 | MS.gene051819:intron | 40.0% | |
| CAGCAACCATATCACATATC+TGG | + | chr8.2:7260651-7260670 | None:intergenic | 40.0% | |
| CATGTTTCTCAGAGAGTTCA+TGG | - | chr8.2:7258718-7258737 | MS.gene051819:intron | 40.0% | |
| CCCCAAATCTCATCTGATTT+AGG | + | chr8.2:7260549-7260568 | None:intergenic | 40.0% | |
| CCGGCTATATAAAGACAAGA+TGG | + | chr8.2:7261381-7261400 | None:intergenic | 40.0% | |
| GACTCCTATATGCATAACCA+AGG | + | chr8.2:7260126-7260145 | None:intergenic | 40.0% | |
| GATCCCTTGGTTATGCATAT+AGG | - | chr8.2:7260119-7260138 | MS.gene051819:intron | 40.0% | |
| GGCCTAAATCAGATGAGATT+TGG | - | chr8.2:7260544-7260563 | MS.gene051819:intron | 40.0% | |
| GGTTCCTTATTACAAGACAG+AGG | - | chr8.2:7261546-7261565 | MS.gene051819:intron | 40.0% | |
| GTGTGGATGTTTGTTCAAAG+TGG | - | chr8.2:7259048-7259067 | MS.gene051819:CDS | 40.0% | |
| GTTACCTTGGACCAAGATAT+TGG | + | chr8.2:7261298-7261317 | None:intergenic | 40.0% | |
| TACCACATTCTTGTTGAGGT+CGG | - | chr8.2:7261351-7261370 | MS.gene051819:intron | 40.0% | |
| TACGAGGTATGATCAAGAGA+AGG | + | chr8.2:7260706-7260725 | None:intergenic | 40.0% | |
| TCAGCTCCAGTTGAAGAATT+TGG | - | chr8.2:7261697-7261716 | MS.gene051819:intron | 40.0% | |
| TCTAACACTTCTTCCGATCT+GGG | + | chr8.2:7258664-7258683 | None:intergenic | 40.0% | |
| TCTTGATCATACCTCGTACT+GGG | - | chr8.2:7260708-7260727 | MS.gene051819:intron | 40.0% | |
| TGCAATCAACTAGGTTGCTT+TGG | - | chr8.2:7259383-7259402 | MS.gene051819:intron | 40.0% | |
| TGCTCCATATCTAAGAGAGT+CGG | - | chr8.2:7262618-7262637 | MS.gene051819:CDS | 40.0% | |
| TGGACGAAGGAAACATTTCT+TGG | - | chr8.2:7262548-7262567 | MS.gene051819:CDS | 40.0% | |
| TTCTCCGAATCAAATTCCGA+TGG | - | chr8.2:7258490-7258509 | MS.gene051819:CDS | 40.0% | |
| TTGGAAAAAGTTCAGCTCCA+AGG | - | chr8.2:7262567-7262586 | MS.gene051819:CDS | 40.0% | |
| ! | AATCAACTAGGTTGCTTTGG+AGG | - | chr8.2:7259386-7259405 | MS.gene051819:intron | 40.0% |
| ! | ACCAAGTGCTCTAAGTAGTA+AGG | + | chr8.2:7262079-7262098 | None:intergenic | 40.0% |
| ! | ACCCATCACTTGATAGCAAA+AGG | + | chr8.2:7261091-7261110 | None:intergenic | 40.0% |
| ! | ACTCTAAAGACGGTAGAAAC+AGG | - | chr8.2:7260166-7260185 | MS.gene051819:intron | 40.0% |
| ! | ATATGAAGTTGGTCACTGGA+AGG | - | chr8.2:7261987-7262006 | MS.gene051819:intron | 40.0% |
| ! | CATGAACTCTCTGAGAAACA+TGG | + | chr8.2:7258720-7258739 | None:intergenic | 40.0% |
| ! | CCCATCACTTGATAGCAAAA+GGG | + | chr8.2:7261090-7261109 | None:intergenic | 40.0% |
| ! | GCTTGGACATTGGATGTTTT+TGG | - | chr8.2:7258816-7258835 | MS.gene051819:intron | 40.0% |
| ! | GTATCTAGAATGCAGCAGAA+TGG | - | chr8.2:7261730-7261749 | MS.gene051819:intron | 40.0% |
| ! | TCCTTACTACTTAGAGCACT+TGG | - | chr8.2:7262075-7262094 | MS.gene051819:intron | 40.0% |
| ! | TCTACAGCAATGGATTCAAG+TGG | + | chr8.2:7258772-7258791 | None:intergenic | 40.0% |
| ! | TGTGGAACGAACTCTAAAGA+CGG | - | chr8.2:7260156-7260175 | MS.gene051819:intron | 40.0% |
| ! | TTTTATGCAAATCCTCTGCC+AGG | - | chr8.2:7262667-7262686 | MS.gene051819:CDS | 40.0% |
| !! | ACCCTTTTGCTATCAAGTGA+TGG | - | chr8.2:7261086-7261105 | MS.gene051819:CDS | 40.0% |
| !! | ACTTTGTGCTGATTTAGGAG+GGG | + | chr8.2:7261577-7261596 | None:intergenic | 40.0% |
| !! | CACTTTGTGCTGATTTAGGA+GGG | + | chr8.2:7261578-7261597 | None:intergenic | 40.0% |
| !! | CCCTTTTGCTATCAAGTGAT+GGG | - | chr8.2:7261087-7261106 | MS.gene051819:CDS | 40.0% |
| !! | GATTTCAATGGTGTTGATGC+AGG | - | chr8.2:7262497-7262516 | MS.gene051819:CDS | 40.0% |
| !! | TCACTTTGTGCTGATTTAGG+AGG | + | chr8.2:7261579-7261598 | None:intergenic | 40.0% |
| !! | TTCTTTTGTTTGGGGATTGG+AGG | - | chr8.2:7259991-7260010 | MS.gene051819:CDS | 40.0% |
| AAGACGGTAGAAACAGGAGT+AGG | - | chr8.2:7260172-7260191 | MS.gene051819:intron | 45.0% | |
| AAGTGAGTGGAGGGATATCT+TGG | + | chr8.2:7260458-7260477 | None:intergenic | 45.0% | |
| AATGCCATTGTTAGCAAGCC+GGG | + | chr8.2:7261623-7261642 | None:intergenic | 45.0% | |
| ACATTACCACCTACCTATGC+TGG | - | chr8.2:7261250-7261269 | MS.gene051819:intron | 45.0% | |
| ACCATTTAGTAGTAGGGAGC+TGG | - | chr8.2:7259573-7259592 | MS.gene051819:CDS | 45.0% | |
| ACTGAAAGGAGATTGCTTGG+TGG | - | chr8.2:7262027-7262046 | MS.gene051819:intron | 45.0% | |
| ACTTGTCTCCACCACAAGTT+TGG | - | chr8.2:7259677-7259696 | MS.gene051819:intron | 45.0% | |
| AGCACAGGTTATGGTTACCT+TGG | + | chr8.2:7261311-7261330 | None:intergenic | 45.0% | |
| AGGCAGATGCGATATGAAGT+TGG | - | chr8.2:7261976-7261995 | MS.gene051819:intron | 45.0% | |
| AGGTAAATCCTGGTGTGTGA+TGG | + | chr8.2:7262105-7262124 | None:intergenic | 45.0% | |
| CAAAGGCTGTACAAGGTCAT+AGG | - | chr8.2:7262322-7262341 | MS.gene051819:CDS | 45.0% | |
| CAGGAACTATCTGACTCCAA+TGG | - | chr8.2:7260067-7260086 | MS.gene051819:intron | 45.0% | |
| CCATTTAGTAGTAGGGAGCT+GGG | - | chr8.2:7259574-7259593 | MS.gene051819:CDS | 45.0% | |
| CGATAGACCTGTTCAAAGCA+TGG | - | chr8.2:7260874-7260893 | MS.gene051819:intron | 45.0% | |
| CTCATCTTCAGAAGACAGAG+AGG | + | chr8.2:7262202-7262221 | None:intergenic | 45.0% | |
| CTCTAACACTTCTTCCGATC+TGG | + | chr8.2:7258665-7258684 | None:intergenic | 45.0% | |
| CTCTTGATCATACCTCGTAC+TGG | - | chr8.2:7260707-7260726 | MS.gene051819:intron | 45.0% | |
| CTGTGGAAATGGAGAAGCTA+CGG | - | chr8.2:7259710-7259729 | MS.gene051819:intron | 45.0% | |
| CTTGTTGATCAGTTGGACGA+AGG | - | chr8.2:7262535-7262554 | MS.gene051819:CDS | 45.0% | |
| GAAGTTTCCCTCGGAGTTAA+TGG | + | chr8.2:7262057-7262076 | None:intergenic | 45.0% | |
| GAATGCCATTGTTAGCAAGC+CGG | + | chr8.2:7261624-7261643 | None:intergenic | 45.0% | |
| GAGTTCTCACTTTAGCAGTG+TGG | + | chr8.2:7260204-7260223 | None:intergenic | 45.0% | |
| GCAAATCAACTCACCCAGAT+CGG | - | chr8.2:7258648-7258667 | MS.gene051819:CDS | 45.0% | |
| GCTCCATATCTAAGAGAGTC+GGG | - | chr8.2:7262619-7262638 | MS.gene051819:CDS | 45.0% | |
| GTGCTAGATGCAAAGACCAA+CGG | - | chr8.2:7260496-7260515 | MS.gene051819:CDS | 45.0% | |
| GTTTCTCAGAGAGTTCATGG+TGG | - | chr8.2:7258721-7258740 | MS.gene051819:intron | 45.0% | |
| TAGGAGTCAAGAAGGAGATG+TGG | - | chr8.2:7260138-7260157 | MS.gene051819:intron | 45.0% | |
| TCACAAATACATCCTGGCAG+AGG | + | chr8.2:7262682-7262701 | None:intergenic | 45.0% | |
| TCTCCCGACTCTCTTAGATA+TGG | + | chr8.2:7262625-7262644 | None:intergenic | 45.0% | |
| TGAATTCCAGCATAGGTAGG+TGG | + | chr8.2:7261259-7261278 | None:intergenic | 45.0% | |
| TGATGACCATGCTTCGAAAC+AGG | + | chr8.2:7258688-7258707 | None:intergenic | 45.0% | |
| TTAGAGCCTGTTTCGAAGCA+TGG | - | chr8.2:7258679-7258698 | MS.gene051819:intron | 45.0% | |
| ! | ACAAATCGTGCGTCCACTTT+TGG | - | chr8.2:7259746-7259765 | MS.gene051819:intron | 45.0% |
| ! | AGTTCATGGTGGAGTTGTGA+AGG | - | chr8.2:7258732-7258751 | MS.gene051819:intron | 45.0% |
| ! | ATTTGTGCTACTGGTTGGCT+TGG | - | chr8.2:7258877-7258896 | MS.gene051819:CDS | 45.0% |
| ! | GTTCATGGTGGAGTTGTGAA+GGG | - | chr8.2:7258733-7258752 | MS.gene051819:intron | 45.0% |
| ! | TGCGATATGAAGTTGGTCAC+TGG | - | chr8.2:7261983-7262002 | MS.gene051819:intron | 45.0% |
| ! | TGCTATGCCATGCTTTGAAC+AGG | + | chr8.2:7260884-7260903 | None:intergenic | 45.0% |
| !! | CAAATCGTGCGTCCACTTTT+GGG | - | chr8.2:7259747-7259766 | MS.gene051819:intron | 45.0% |
| !! | TTAGATATGGAGCACCGTCA+CGG | + | chr8.2:7262612-7262631 | None:intergenic | 45.0% |
| !! | TTGGTTTTCCATCACACACC+AGG | - | chr8.2:7262094-7262113 | MS.gene051819:intron | 45.0% |
| !!! | ATTTAATTTAATATAATCTT+TGG | - | chr8.2:7258993-7259012 | MS.gene051819:CDS | 5.0% |
| ACCAGGATTTACCTCGTAGC+TGG | - | chr8.2:7262111-7262130 | MS.gene051819:intron | 50.0% | |
| ACGGTAGAAACAGGAGTAGG+TGG | - | chr8.2:7260175-7260194 | MS.gene051819:intron | 50.0% | |
| CATATGCTTCTCCAGCTACG+AGG | + | chr8.2:7262125-7262144 | None:intergenic | 50.0% | |
| CCCAGCTCCCTACTACTAAA+TGG | + | chr8.2:7259577-7259596 | None:intergenic | 50.0% | |
| GAACGGCTGAATTCCAGCAT+AGG | + | chr8.2:7261266-7261285 | None:intergenic | 50.0% | |
| GACTCCATCTCCCTACCATT+TGG | + | chr8.2:7259905-7259924 | None:intergenic | 50.0% | |
| GACTCGCTGTGAAACTCCAT+CGG | + | chr8.2:7258509-7258528 | None:intergenic | 50.0% | |
| GGCTGAATTCCAGCATAGGT+AGG | + | chr8.2:7261262-7261281 | None:intergenic | 50.0% | |
| GGGACTGAAAGGAGATTGCT+TGG | - | chr8.2:7262024-7262043 | MS.gene051819:intron | 50.0% | |
| GTCAACAGTCCACGTTTCTC+CGG | - | chr8.2:7258526-7258545 | MS.gene051819:CDS | 50.0% | |
| TCCAGCTACGAGGTAAATCC+TGG | + | chr8.2:7262115-7262134 | None:intergenic | 50.0% | |
| TGCGTTTGAAGGACTGAGCA+CGG | + | chr8.2:7258564-7258583 | None:intergenic | 50.0% | |
| TGGCTGTCCATTAACTCCGA+GGG | - | chr8.2:7262047-7262066 | MS.gene051819:intron | 50.0% | |
| TTAGTAGTAGGGAGCTGGGA+AGG | - | chr8.2:7259578-7259597 | MS.gene051819:CDS | 50.0% | |
| TTCAAACGCAACAACGCCAG+CGG | - | chr8.2:7258574-7258593 | MS.gene051819:CDS | 50.0% | |
| TTGTTTGGGGATTGGAGGCA+GGG | - | chr8.2:7259996-7260015 | MS.gene051819:CDS | 50.0% | |
| TTTCAGCCGCTACCCAAAAG+TGG | + | chr8.2:7259762-7259781 | None:intergenic | 50.0% | |
| TTTGTTTGGGGATTGGAGGC+AGG | - | chr8.2:7259995-7260014 | MS.gene051819:CDS | 50.0% | |
| ! | CTAGTGGACCAAAGATCCCT+TGG | - | chr8.2:7260106-7260125 | MS.gene051819:intron | 50.0% |
| ! | CTCGTAGCTGGAGAAGCATA+TGG | - | chr8.2:7262123-7262142 | MS.gene051819:intron | 50.0% |
| ! | GCTGGAGAAGCATATGGAAG+AGG | - | chr8.2:7262129-7262148 | MS.gene051819:intron | 50.0% |
| !! | GATTCCCGGCTTGCTAACAA+TGG | - | chr8.2:7261616-7261635 | MS.gene051819:intron | 50.0% |
| GCTGGCGTTGTTGCGTTTGA+AGG | + | chr8.2:7258575-7258594 | None:intergenic | 55.0% | |
| GGCCGACCTCAACAAGAATG+TGG | + | chr8.2:7261356-7261375 | None:intergenic | 55.0% | |
| GTGGCTGTCCATTAACTCCG+AGG | - | chr8.2:7262046-7262065 | MS.gene051819:intron | 55.0% | |
| !! | GTGCGTCCACTTTTGGGTAG+CGG | - | chr8.2:7259753-7259772 | MS.gene051819:intron | 55.0% |
| CCTCGTACTGGGCTGATCAG+AGG | - | chr8.2:7260719-7260738 | MS.gene051819:intron | 60.0% | |
| CCTCTGATCAGCCCAGTACG+AGG | + | chr8.2:7260722-7260741 | None:intergenic | 60.0% | |
| GACTGAGCACGGCGAGTCAT+CGG | + | chr8.2:7258553-7258572 | None:intergenic | 60.0% | |
| GTCATCGGACCGGAGAAACG+TGG | + | chr8.2:7258538-7258557 | None:intergenic | 60.0% | |
| AGCACGGCGAGTCATCGGAC+CGG | + | chr8.2:7258548-7258567 | None:intergenic | 65.0% | |
| GAGTGCGCCGCCGCTCACGA+CGG | + | chr8.2:7258605-7258624 | None:intergenic | 75.0% | |
| ! | AGCGGCGCCGCCGTCGTGAG+CGG | - | chr8.2:7258592-7258611 | MS.gene051819:CDS | 80.0% |
| ! | TGCGCCGCCGCTCACGACGG+CGG | + | chr8.2:7258602-7258621 | None:intergenic | 80.0% |
| ! | GCTCACGACGGCGGCGCCGC+TGG | + | chr8.2:7258593-7258612 | None:intergenic | 85.0% |
| ! | GGCGCCGCCGTCGTGAGCGG+CGG | - | chr8.2:7258595-7258614 | MS.gene051819:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 7258481 | 7262720 | 7258481 | ID=MS.gene051819 |
| chr8.2 | mRNA | 7258481 | 7262720 | 7258481 | ID=MS.gene051819.t1;Parent=MS.gene051819 |
| chr8.2 | exon | 7262271 | 7262720 | 7262271 | ID=MS.gene051819.t1.exon1;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7262271 | 7262720 | 7262271 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7260988 | 7261131 | 7260988 | ID=MS.gene051819.t1.exon2;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7260988 | 7261131 | 7260988 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7260802 | 7260874 | 7260802 | ID=MS.gene051819.t1.exon3;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7260802 | 7260874 | 7260802 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7260634 | 7260704 | 7260634 | ID=MS.gene051819.t1.exon4;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7260634 | 7260704 | 7260634 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7260461 | 7260549 | 7260461 | ID=MS.gene051819.t1.exon5;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7260461 | 7260549 | 7260461 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7259889 | 7260021 | 7259889 | ID=MS.gene051819.t1.exon6;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7259889 | 7260021 | 7259889 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7259422 | 7259654 | 7259422 | ID=MS.gene051819.t1.exon7;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7259422 | 7259654 | 7259422 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7258819 | 7259295 | 7258819 | ID=MS.gene051819.t1.exon8;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7258819 | 7259295 | 7258819 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| chr8.2 | exon | 7258481 | 7258682 | 7258481 | ID=MS.gene051819.t1.exon9;Parent=MS.gene051819.t1 |
| chr8.2 | CDS | 7258481 | 7258682 | 7258481 | ID=cds.MS.gene051819.t1;Parent=MS.gene051819.t1 |
| Gene Sequence |
| Protein sequence |
