Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04216.t1 | XP_013460014.1 | 95.9 | 219 | 9 | 0 | 61 | 279 | 1 | 219 | 4.30E-106 | 394.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04216.t1 | P82413 | 56.1 | 132 | 54 | 1 | 147 | 278 | 102 | 229 | 3.5e-32 | 140.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04216.t1 | A0A072V7A1 | 95.9 | 219 | 9 | 0 | 61 | 279 | 1 | 219 | 3.1e-106 | 394.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94930 | MS.gene04216 | PPI |
| MS.gene95386 | MS.gene04216 | PPI |
| MS.gene04216 | MS.gene95386 | PPI |
| MS.gene04216 | MS.gene04266 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04216.t1 | MTR_3g058620 | 95.980 | 199 | 8 | 0 | 81 | 279 | 21 | 219 | 1.75e-138 | 389 |
| MS.gene04216.t1 | MTR_5g013300 | 36.364 | 231 | 121 | 4 | 46 | 275 | 17 | 222 | 2.91e-41 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04216.t1 | AT5G11750 | 75.839 | 149 | 33 | 2 | 133 | 279 | 80 | 227 | 7.42e-76 | 231 |
| MS.gene04216.t1 | AT4G11630 | 75.342 | 146 | 33 | 1 | 134 | 279 | 81 | 223 | 3.48e-75 | 229 |
| MS.gene04216.t1 | AT5G11750 | 65.318 | 173 | 33 | 3 | 133 | 279 | 80 | 251 | 2.70e-70 | 218 |
| MS.gene04216.t1 | AT1G24240 | 57.746 | 213 | 66 | 3 | 88 | 279 | 11 | 220 | 1.04e-66 | 207 |
| MS.gene04216.t1 | AT4G17560 | 49.296 | 142 | 65 | 1 | 134 | 275 | 84 | 218 | 1.34e-37 | 132 |
| MS.gene04216.t1 | AT5G47190 | 60.000 | 105 | 42 | 0 | 171 | 275 | 118 | 222 | 8.41e-37 | 130 |
| MS.gene04216.t1 | AT1G24240 | 64.865 | 74 | 23 | 1 | 129 | 202 | 73 | 143 | 3.85e-24 | 95.9 |
Find 77 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGTGTTGGTAGGGTTTA+TGG | 0.134394 | 3.2:+50816118 | None:intergenic |
| AGGCGTGTTTCTATTATAAA+AGG | 0.194759 | 3.2:-50812883 | MS.gene04216:CDS |
| GTGACTGAACGATGTCGTTT+TGG | 0.263385 | 3.2:+50816162 | None:intergenic |
| TTGATGCGGGGAGGCAATTC+AGG | 0.268789 | 3.2:+50813248 | None:intergenic |
| ATCCCTCAGGTAGTAGAGTT+TGG | 0.318153 | 3.2:+50812187 | None:intergenic |
| ACCCTTACACCACACTAATT+CGG | 0.333219 | 3.2:-50816222 | MS.gene04216:CDS |
| CACACTAATTCGGGTCGAAT+CGG | 0.334875 | 3.2:-50816212 | MS.gene04216:CDS |
| ACCTTTATCTCCTTTATGTT+AGG | 0.356884 | 3.2:+50812236 | None:intergenic |
| ACCTAACATAAAGGAGATAA+AGG | 0.358575 | 3.2:-50812237 | MS.gene04216:CDS |
| TTGGGATTCGGGTACTCGTT+CGG | 0.364057 | 3.2:+50816181 | None:intergenic |
| CGGGGAGGCAATTCAGGTTC+TGG | 0.369112 | 3.2:+50813254 | None:intergenic |
| CCCTTACACCACACTAATTC+GGG | 0.388958 | 3.2:-50816221 | MS.gene04216:CDS |
| ACACTACATTCAGACTTAGA+AGG | 0.398714 | 3.2:-50812828 | MS.gene04216:CDS |
| GAAGGATGGTAGCTGGGGTT+GGG | 0.398853 | 3.2:-50812810 | MS.gene04216:CDS |
| ATTAGTGTGGTGTAAGGGTT+TGG | 0.399953 | 3.2:+50816226 | None:intergenic |
| TTGTCCCTCATTTCCGAAGC+AGG | 0.430695 | 3.2:-50813328 | MS.gene04216:CDS |
| GAAAGAGATTTGGCGGAGAT+AGG | 0.431305 | 3.2:+50815989 | None:intergenic |
| ATATAACCAGGCTTTATATC+AGG | 0.433635 | 3.2:+50813045 | None:intergenic |
| AGAAGGATGGTAGCTGGGGT+TGG | 0.434672 | 3.2:-50812811 | MS.gene04216:CDS |
| ACACTAATTCGGGTCGAATC+GGG | 0.442887 | 3.2:-50816211 | MS.gene04216:CDS |
| ACCCGAATTAGTGTGGTGTA+AGG | 0.442920 | 3.2:+50816220 | None:intergenic |
| CGGTAGACATAAACCTGCTT+CGG | 0.445201 | 3.2:+50813315 | None:intergenic |
| TAATCTCTTAAATTTGATGC+GGG | 0.446449 | 3.2:+50813235 | None:intergenic |
| GACTTAGAAGGATGGTAGCT+GGG | 0.461287 | 3.2:-50812816 | MS.gene04216:CDS |
| GGCGTGTTTCTATTATAAAA+GGG | 0.465947 | 3.2:-50812882 | MS.gene04216:CDS |
| TTACCGTGGAGAAAGAGATT+TGG | 0.468649 | 3.2:+50815979 | None:intergenic |
| ACGAATCAGCCATGGCTTCA+CGG | 0.473904 | 3.2:-50816076 | MS.gene04216:CDS |
| GAGAGGAAGAAGAAAAGCTT+TGG | 0.486437 | 3.2:+50816100 | None:intergenic |
| AGACTTAGAAGGATGGTAGC+TGG | 0.494744 | 3.2:-50812817 | MS.gene04216:CDS |
| AGACAAAGAAGCAGTGGAGG+AGG | 0.496174 | 3.2:-50813088 | MS.gene04216:CDS |
| CCGTGGAGAAAGAGATTTGG+CGG | 0.496540 | 3.2:+50815982 | None:intergenic |
| ATCTCTCACTCGCTCTTCAT+CGG | 0.497958 | 3.2:-50816027 | MS.gene04216:CDS |
| GAAAAGCTTTGGTGTTGGTA+GGG | 0.501643 | 3.2:+50816111 | None:intergenic |
| ATAAACCTGCTTCGGAAATG+AGG | 0.502963 | 3.2:+50813323 | None:intergenic |
| TAAAAGGGATTGTTATTGCA+AGG | 0.505129 | 3.2:-50812867 | MS.gene04216:CDS |
| GTATCCTCTAGAGATGAGTC+TGG | 0.510292 | 3.2:-50813395 | MS.gene04216:CDS |
| AACCGCGAGGCACATTATGC+AGG | 0.510916 | 3.2:-50813207 | MS.gene04216:intron |
| ACAGAACCATGCTGAAATGA+AGG | 0.517294 | 3.2:+50813353 | None:intergenic |
| AGAAAAGCTTTGGTGTTGGT+AGG | 0.522314 | 3.2:+50816110 | None:intergenic |
| CAGGTATTCACCTAACATAA+AGG | 0.524817 | 3.2:-50812246 | MS.gene04216:CDS |
| AAGAAGAAAAGCTTTGGTGT+TGG | 0.530712 | 3.2:+50816106 | None:intergenic |
| TCTAGAGATGAGTCTGGTAA+TGG | 0.532054 | 3.2:-50813389 | MS.gene04216:CDS |
| CCCGAATTAGTGTGGTGTAA+GGG | 0.537645 | 3.2:+50816221 | None:intergenic |
| CTAATCTCTTAAATTTGATG+CGG | 0.540456 | 3.2:+50813234 | None:intergenic |
| TCATATATCATAGGAAGTAC+CGG | 0.546725 | 3.2:-50812914 | MS.gene04216:intron |
| GAGGTACCTGATATAAAGCC+TGG | 0.550742 | 3.2:-50813051 | MS.gene04216:CDS |
| GAAACACGCCTCTTGTTCTC+CGG | 0.554578 | 3.2:+50812895 | None:intergenic |
| AGGCAATTCAGGTTCTGGTA+AGG | 0.561434 | 3.2:+50813259 | None:intergenic |
| TCCTCTCTACGAATCAGCCA+TGG | 0.566678 | 3.2:-50816084 | MS.gene04216:CDS |
| TTTAGACAAAGAAGCAGTGG+AGG | 0.569964 | 3.2:-50813091 | MS.gene04216:CDS |
| GTTATTGCAAGGCGTAATTG+TGG | 0.573207 | 3.2:-50812856 | MS.gene04216:CDS |
| GAGATTTGGCGGAGATAGGT+CGG | 0.575095 | 3.2:+50815993 | None:intergenic |
| GTAGGGTTTATGGTTTGCGA+AGG | 0.575130 | 3.2:+50816128 | None:intergenic |
| GAAGAGTCTCCGTGAAGCCA+TGG | 0.578236 | 3.2:+50816067 | None:intergenic |
| TAAACCTGCTTCGGAAATGA+GGG | 0.601675 | 3.2:+50813324 | None:intergenic |
| CTCTTAAATTTGATGCGGGG+AGG | 0.603126 | 3.2:+50813239 | None:intergenic |
| AGGAAGTACCGGAGAACAAG+AGG | 0.604082 | 3.2:-50812903 | MS.gene04216:CDS |
| GCCATGGCTGATTCGTAGAG+AGG | 0.609430 | 3.2:+50816083 | None:intergenic |
| GGAGGTGAAAGAACAGAGAG+AGG | 0.615909 | 3.2:-50813070 | MS.gene04216:CDS |
| CCGCCAAATCTCTTTCTCCA+CGG | 0.624603 | 3.2:-50815982 | MS.gene04216:intron |
| TTGAGCTGCACAATATAACC+AGG | 0.624977 | 3.2:+50813033 | None:intergenic |
| ACATTGCCTTCATTTCAGCA+TGG | 0.629260 | 3.2:-50813359 | MS.gene04216:CDS |
| AGAATCAACAGAATTTGTCT+CGG | 0.631893 | 3.2:+50813295 | None:intergenic |
| TACATTCAGACTTAGAAGGA+TGG | 0.634854 | 3.2:-50812824 | MS.gene04216:CDS |
| GAGCCAAACTCTACTACCTG+AGG | 0.635973 | 3.2:-50812190 | MS.gene04216:CDS |
| AAGAGCGAGTGAGAGATGAA+CGG | 0.636322 | 3.2:+50816033 | None:intergenic |
| ACTTAGAAGGATGGTAGCTG+GGG | 0.639779 | 3.2:-50812815 | MS.gene04216:CDS |
| CTAGAGGATACATTCGTCTG+AGG | 0.640083 | 3.2:+50813407 | None:intergenic |
| AATCTCTTAAATTTGATGCG+GGG | 0.640370 | 3.2:+50813236 | None:intergenic |
| ATTACCAGACTCATCTCTAG+AGG | 0.648515 | 3.2:+50813391 | None:intergenic |
| CGATTCGACCCGAATTAGTG+TGG | 0.652766 | 3.2:+50816213 | None:intergenic |
| AGCGAGTGAGAGATGAACGG+AGG | 0.664015 | 3.2:+50816036 | None:intergenic |
| AGCCAAACTCTACTACCTGA+GGG | 0.676552 | 3.2:-50812189 | MS.gene04216:CDS |
| TTATATTGTGCAGCTCAAAG+TGG | 0.710180 | 3.2:-50813028 | MS.gene04216:intron |
| TGCCTGCATAATGTGCCTCG+CGG | 0.710446 | 3.2:+50813205 | None:intergenic |
| ATGCTGAAATGAAGGCAATG+TGG | 0.734346 | 3.2:+50813361 | None:intergenic |
| AGAGATTAGATAAAACCGCG+AGG | 0.761190 | 3.2:-50813220 | MS.gene04216:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATATATAAAATATGAA+AGG | + | chr3.2:50815657-50815676 | None:intergenic | 10.0% |
| !!! | TTTAGAAAAATACTTTTTAT+TGG | - | chr3.2:50816009-50816028 | MS.gene04216:CDS | 10.0% |
| !!! | TTTTTCATAAACTTAAAATA+AGG | + | chr3.2:50812765-50812784 | None:intergenic | 10.0% |
| !! | AACATTAAATAAACAGAAAT+GGG | + | chr3.2:50814324-50814343 | None:intergenic | 15.0% |
| !! | TAACATTAAATAAACAGAAA+TGG | + | chr3.2:50814325-50814344 | None:intergenic | 15.0% |
| !! | TAATCATTTGTAAAAATTGT+TGG | - | chr3.2:50815275-50815294 | MS.gene04216:intron | 15.0% |
| !!! | TATTTTTAGTTTACTTTCAT+AGG | - | chr3.2:50814104-50814123 | MS.gene04216:intron | 15.0% |
| !!! | TGTGTTTTGTTTTAAATAAA+GGG | - | chr3.2:50815240-50815259 | MS.gene04216:intron | 15.0% |
| !!! | TTTTTTTTCATATAGACTAT+GGG | + | chr3.2:50812964-50812983 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCATATAGACTA+TGG | + | chr3.2:50812965-50812984 | None:intergenic | 15.0% |
| !! | ACATAATTATAAGCAAAAGT+AGG | - | chr3.2:50813788-50813807 | MS.gene04216:intron | 20.0% |
| !! | ATTTCATAGCATATACAAAA+GGG | + | chr3.2:50813973-50813992 | None:intergenic | 20.0% |
| !! | GTATAAGCTATAGAAAAATT+GGG | - | chr3.2:50812566-50812585 | MS.gene04216:intron | 20.0% |
| !! | TCAAAGAAATTTCATGTATT+TGG | + | chr3.2:50813850-50813869 | None:intergenic | 20.0% |
| !! | TGTATAAGCTATAGAAAAAT+TGG | - | chr3.2:50812565-50812584 | MS.gene04216:intron | 20.0% |
| !! | TTAATTGTGGGATTATTTAA+TGG | - | chr3.2:50814194-50814213 | MS.gene04216:intron | 20.0% |
| !!! | AAATAAAGAAATTGATAACC+CGG | + | chr3.2:50815715-50815734 | None:intergenic | 20.0% |
| !!! | ACTTACTTTTGCTTATATTA+AGG | - | chr3.2:50813869-50813888 | MS.gene04216:intron | 20.0% |
| !!! | CTGTGTTTTGTTTTAAATAA+AGG | - | chr3.2:50815239-50815258 | MS.gene04216:intron | 20.0% |
| ! | AAAAAGTTGTTTATCCAAGT+TGG | - | chr3.2:50814921-50814940 | MS.gene04216:intron | 25.0% |
| ! | AAAAGTTGTTTATCCAAGTT+GGG | - | chr3.2:50814922-50814941 | MS.gene04216:intron | 25.0% |
| ! | AAATGAATGCCCTAAAATAA+AGG | - | chr3.2:50816248-50816267 | MS.gene04216:CDS | 25.0% |
| ! | AACATAAGATGTGTTTGAAT+AGG | + | chr3.2:50815991-50816010 | None:intergenic | 25.0% |
| ! | ACTGTTATGTCATATATCAT+AGG | - | chr3.2:50815488-50815507 | MS.gene04216:intron | 25.0% |
| ! | ATATAATTTATGCATGGTAG+TGG | - | chr3.2:50813414-50813433 | MS.gene04216:CDS | 25.0% |
| ! | CTAATCTCTTAAATTTGATG+CGG | + | chr3.2:50815180-50815199 | None:intergenic | 25.0% |
| ! | GATTTCATAGCATATACAAA+AGG | + | chr3.2:50813974-50813993 | None:intergenic | 25.0% |
| ! | GGAGTATAATTAAAGGAATT+AGG | - | chr3.2:50813300-50813319 | MS.gene04216:CDS | 25.0% |
| ! | GTATCATGTTACAAATTGTA+AGG | - | chr3.2:50813370-50813389 | MS.gene04216:CDS | 25.0% |
| ! | TAATAAAACAGCCTAATAAC+CGG | + | chr3.2:50814721-50814740 | None:intergenic | 25.0% |
| ! | TAATCTCTTAAATTTGATGC+GGG | + | chr3.2:50815179-50815198 | None:intergenic | 25.0% |
| ! | TATAGCTTATATGAAAGAGT+AGG | - | chr3.2:50814155-50814174 | MS.gene04216:intron | 25.0% |
| ! | TATTATTGAGGCAATTGATT+TGG | - | chr3.2:50813479-50813498 | MS.gene04216:intron | 25.0% |
| ! | TCAAAGAAAGGTAATGTATT+TGG | - | chr3.2:50813811-50813830 | MS.gene04216:intron | 25.0% |
| ! | TCAAATATTCAATTGCACAA+TGG | - | chr3.2:50814397-50814416 | MS.gene04216:intron | 25.0% |
| ! | TGAAAACCATTTAAACACTT+AGG | + | chr3.2:50813105-50813124 | None:intergenic | 25.0% |
| ! | TTGTATATGCTATGAAATCT+GGG | - | chr3.2:50813975-50813994 | MS.gene04216:intron | 25.0% |
| ! | TTTGTATATGCTATGAAATC+TGG | - | chr3.2:50813974-50813993 | MS.gene04216:intron | 25.0% |
| !! | AACAATCTAAAGTGATTTCT+TGG | - | chr3.2:50814346-50814365 | MS.gene04216:intron | 25.0% |
| !! | AAGAAGTGTGTAGTTAAAAT+AGG | - | chr3.2:50815811-50815830 | MS.gene04216:intron | 25.0% |
| !! | ATTCTTTTTACTCTCTTTTG+TGG | + | chr3.2:50815864-50815883 | None:intergenic | 25.0% |
| !! | CTTCTTTGTCTAAAATCTAA+AGG | + | chr3.2:50815314-50815333 | None:intergenic | 25.0% |
| !! | TAAAACCTTGCAATTTTTCA+TGG | - | chr3.2:50814287-50814306 | MS.gene04216:intron | 25.0% |
| !! | TTCTTTTTACTCTCTTTTGT+GGG | + | chr3.2:50815863-50815882 | None:intergenic | 25.0% |
| !! | TTTTCAATCCAATATAGTTG+TGG | - | chr3.2:50813119-50813138 | MS.gene04216:intron | 25.0% |
| !!! | AATGTATTTGGTTCAAGTTT+TGG | - | chr3.2:50813823-50813842 | MS.gene04216:intron | 25.0% |
| !!! | ATGCTTTTTTAAAGCACTTT+GGG | - | chr3.2:50815953-50815972 | MS.gene04216:intron | 25.0% |
| !!! | GATGTTTTTATTGAAGAAAG+AGG | - | chr3.2:50813076-50813095 | MS.gene04216:CDS | 25.0% |
| !!! | GTTTTATTAGTTGAGCAATT+AGG | - | chr3.2:50814732-50814751 | MS.gene04216:intron | 25.0% |
| !!! | TATGCTTTTTTAAAGCACTT+TGG | - | chr3.2:50815952-50815971 | MS.gene04216:intron | 25.0% |
| !!! | TTCTTATGTCTTGTTTTTGT+TGG | - | chr3.2:50814865-50814884 | MS.gene04216:intron | 25.0% |
| AACAATCTCAGCTTAATTGT+GGG | - | chr3.2:50814182-50814201 | MS.gene04216:intron | 30.0% | |
| AATAAAACAGCCTAATAACC+GGG | + | chr3.2:50814720-50814739 | None:intergenic | 30.0% | |
| AATCTCTTAAATTTGATGCG+GGG | + | chr3.2:50815178-50815197 | None:intergenic | 30.0% | |
| AATGGATCCAAGATTAACAA+GGG | - | chr3.2:50813502-50813521 | MS.gene04216:intron | 30.0% | |
| ACATTCTTGTTGGATTTAAG+AGG | - | chr3.2:50813557-50813576 | MS.gene04216:intron | 30.0% | |
| ACCTAACATAAAGGAGATAA+AGG | - | chr3.2:50816174-50816193 | MS.gene04216:CDS | 30.0% | |
| ACCTTTATCTCCTTTATGTT+AGG | + | chr3.2:50816178-50816197 | None:intergenic | 30.0% | |
| AGAATCAACAGAATTTGTCT+CGG | + | chr3.2:50815119-50815138 | None:intergenic | 30.0% | |
| AGGTTTCCTAAGTGTTTAAA+TGG | - | chr3.2:50813096-50813115 | MS.gene04216:CDS | 30.0% | |
| AGTGCGATATAATTTATGCA+TGG | - | chr3.2:50813408-50813427 | MS.gene04216:CDS | 30.0% | |
| ATGAAAGGTAATACTTACAG+TGG | + | chr3.2:50815642-50815661 | None:intergenic | 30.0% | |
| ATGTCATTCCACAACTATAT+TGG | + | chr3.2:50813130-50813149 | None:intergenic | 30.0% | |
| ATTGTGGGATTATTTAATGG+AGG | - | chr3.2:50814197-50814216 | MS.gene04216:intron | 30.0% | |
| ATTTAATGGAGGAAAAGAAG+TGG | - | chr3.2:50814208-50814227 | MS.gene04216:intron | 30.0% | |
| CTAAAGTGATTTCTTGGAAT+TGG | - | chr3.2:50814352-50814371 | MS.gene04216:intron | 30.0% | |
| CTATAGAAAAATTGGGATAC+GGG | - | chr3.2:50812573-50812592 | MS.gene04216:intron | 30.0% | |
| CTTTACCATGAAAAATTGCA+AGG | + | chr3.2:50814295-50814314 | None:intergenic | 30.0% | |
| GACTTAAATTTAGCATGCTT+GGG | - | chr3.2:50814231-50814250 | MS.gene04216:intron | 30.0% | |
| GAGATATTATGCTCATTGTA+CGG | - | chr3.2:50813712-50813731 | MS.gene04216:intron | 30.0% | |
| GATAAGGATGGTTATTATTG+AGG | - | chr3.2:50813467-50813486 | MS.gene04216:intron | 30.0% | |
| GATTATGACAAAAGACTACA+TGG | + | chr3.2:50813739-50813758 | None:intergenic | 30.0% | |
| GCTATAGAAAAATTGGGATA+CGG | - | chr3.2:50812572-50812591 | MS.gene04216:intron | 30.0% | |
| GTACTTTATGATCATGAATG+AGG | - | chr3.2:50813334-50813353 | MS.gene04216:CDS | 30.0% | |
| TACAAACACTTGTAGCATAA+AGG | - | chr3.2:50813032-50813051 | MS.gene04216:CDS | 30.0% | |
| TGAAAGGTAATACTTACAGT+GGG | + | chr3.2:50815641-50815660 | None:intergenic | 30.0% | |
| TGACATATGTACATAAGCTT+TGG | - | chr3.2:50813144-50813163 | MS.gene04216:intron | 30.0% | |
| TTATAGATGTCTCTGTTTGT+TGG | - | chr3.2:50815783-50815802 | MS.gene04216:intron | 30.0% | |
| TTATTCATCATAGCATCATC+AGG | + | chr3.2:50815901-50815920 | None:intergenic | 30.0% | |
| TTGCTTATATTAAGGCCATA+GGG | - | chr3.2:50813877-50813896 | MS.gene04216:intron | 30.0% | |
| TTTAATGGAGGAAAAGAAGT+GGG | - | chr3.2:50814209-50814228 | MS.gene04216:intron | 30.0% | |
| TTTGCTTATATTAAGGCCAT+AGG | - | chr3.2:50813876-50813895 | MS.gene04216:intron | 30.0% | |
| TTTGTCACAATTTCTTGTGT+AGG | - | chr3.2:50814970-50814989 | MS.gene04216:intron | 30.0% | |
| ! | AGGCGTGTTTCTATTATAAA+AGG | - | chr3.2:50815528-50815547 | MS.gene04216:intron | 30.0% |
| ! | ATATAACCAGGCTTTATATC+AGG | + | chr3.2:50815369-50815388 | None:intergenic | 30.0% |
| ! | CTATTTTCATCTGAAGACAT+TGG | + | chr3.2:50813619-50813638 | None:intergenic | 30.0% |
| ! | GGCGTGTTTCTATTATAAAA+GGG | - | chr3.2:50815529-50815548 | MS.gene04216:intron | 30.0% |
| ! | TAAAAGGGATTGTTATTGCA+AGG | - | chr3.2:50815544-50815563 | MS.gene04216:intron | 30.0% |
| ! | TACTGATTATCTGATAAGGA+TGG | - | chr3.2:50813455-50813474 | MS.gene04216:intron | 30.0% |
| ! | TCATATATCATAGGAAGTAC+CGG | - | chr3.2:50815497-50815516 | MS.gene04216:intron | 30.0% |
| ! | TGCAATTTTTCATGGTAAAG+TGG | - | chr3.2:50814295-50814314 | MS.gene04216:intron | 30.0% |
| !! | ATAAGAGTATCAATTAGCTC+AGG | + | chr3.2:50816143-50816162 | None:intergenic | 30.0% |
| !!! | TGCTTTTTTAAAGCACTTTG+GGG | - | chr3.2:50815954-50815973 | MS.gene04216:intron | 30.0% |
| AAGCTATCATAGAGAGCTTA+TGG | + | chr3.2:50812709-50812728 | None:intergenic | 35.0% | |
| AAGCTCTCTATGATAGCTTA+TGG | - | chr3.2:50812710-50812729 | MS.gene04216:intron | 35.0% | |
| ACACTACATTCAGACTTAGA+AGG | - | chr3.2:50815583-50815602 | MS.gene04216:intron | 35.0% | |
| AGCAAAAGTAGGTCAAAGAA+AGG | - | chr3.2:50813799-50813818 | MS.gene04216:intron | 35.0% | |
| AGCAAACTATTTAGTCCCTA+TGG | + | chr3.2:50813895-50813914 | None:intergenic | 35.0% | |
| AGCTTATGGAAACAGCTTAT+AGG | - | chr3.2:50812724-50812743 | MS.gene04216:intron | 35.0% | |
| ATATAGACTATGGGTCTGTT+TGG | + | chr3.2:50812955-50812974 | None:intergenic | 35.0% | |
| ATGCGGTGGAGTATAATTAA+AGG | - | chr3.2:50813293-50813312 | MS.gene04216:CDS | 35.0% | |
| CAAACAGAGACATCTATAAC+AGG | + | chr3.2:50815782-50815801 | None:intergenic | 35.0% | |
| CAACAATCTCAGCTTAATTG+TGG | - | chr3.2:50814181-50814200 | MS.gene04216:intron | 35.0% | |
| CAATTTGTGTACGTATAAGG+TGG | - | chr3.2:50813262-50813281 | MS.gene04216:CDS | 35.0% | |
| CACCTTATACGTACACAAAT+TGG | + | chr3.2:50813264-50813283 | None:intergenic | 35.0% | |
| CTTACTTCCCTTGTTAATCT+TGG | + | chr3.2:50813512-50813531 | None:intergenic | 35.0% | |
| GAATGGATCCAAGATTAACA+AGG | - | chr3.2:50813501-50813520 | MS.gene04216:intron | 35.0% | |
| GCTTATGGAAACAGCTTATA+GGG | - | chr3.2:50812725-50812744 | MS.gene04216:intron | 35.0% | |
| GGACTTAAATTTAGCATGCT+TGG | - | chr3.2:50814230-50814249 | MS.gene04216:intron | 35.0% | |
| TACATTCAGACTTAGAAGGA+TGG | - | chr3.2:50815587-50815606 | MS.gene04216:intron | 35.0% | |
| TAGACTGCACAATGATAGTA+TGG | - | chr3.2:50814466-50814485 | MS.gene04216:intron | 35.0% | |
| TATCTACATACTGTCTTAGC+AGG | - | chr3.2:50814782-50814801 | MS.gene04216:intron | 35.0% | |
| TGGTTTGATGAACTTAGTGA+CGG | - | chr3.2:50813164-50813183 | MS.gene04216:intron | 35.0% | |
| TTATATTGTGCAGCTCAAAG+TGG | - | chr3.2:50815383-50815402 | MS.gene04216:intron | 35.0% | |
| TTTACTTTCATAGGCTCTCT+AGG | - | chr3.2:50814113-50814132 | MS.gene04216:intron | 35.0% | |
| TTTCTTGGAATTGGTTGCAT+TGG | - | chr3.2:50814361-50814380 | MS.gene04216:intron | 35.0% | |
| ! | AAGAAGAAAAGCTTTGGTGT+TGG | + | chr3.2:50812308-50812327 | None:intergenic | 35.0% |
| ! | CAAGTTGGGATAATCTCTTA+GGG | - | chr3.2:50814936-50814955 | MS.gene04216:intron | 35.0% |
| ! | CATTTTTCATGCTTGTGCTT+AGG | - | chr3.2:50813942-50813961 | MS.gene04216:intron | 35.0% |
| ! | GATTTTAGACAAAGAAGCAG+TGG | - | chr3.2:50815317-50815336 | MS.gene04216:intron | 35.0% |
| ! | TTTTTACTCTCTTTTGTGGG+TGG | + | chr3.2:50815860-50815879 | None:intergenic | 35.0% |
| !! | AGGGACTAAATAGTTTGCTT+AGG | - | chr3.2:50813896-50813915 | MS.gene04216:intron | 35.0% |
| !! | GATATTGGGTTGATTATTGG+TGG | - | chr3.2:50814617-50814636 | MS.gene04216:intron | 35.0% |
| !! | GTGGTACTGATTATCTGATA+AGG | - | chr3.2:50813451-50813470 | MS.gene04216:intron | 35.0% |
| !! | TTGAGGCAATTGATTTGGAA+TGG | - | chr3.2:50813484-50813503 | MS.gene04216:intron | 35.0% |
| !!! | GCATACTTGCTATTTTGTAC+AGG | - | chr3.2:50815739-50815758 | MS.gene04216:intron | 35.0% |
| AACAAGAATGTGATCTGTGG+TGG | + | chr3.2:50813548-50813567 | None:intergenic | 40.0% | |
| ACACACAAAACACGTTGAAC+TGG | + | chr3.2:50816073-50816092 | None:intergenic | 40.0% | |
| ACAGAACCATGCTGAAATGA+AGG | + | chr3.2:50815061-50815080 | None:intergenic | 40.0% | |
| ACATTGCCTTCATTTCAGCA+TGG | - | chr3.2:50815052-50815071 | MS.gene04216:intron | 40.0% | |
| ACCACAGATCACATTCTTGT+TGG | - | chr3.2:50813547-50813566 | MS.gene04216:intron | 40.0% | |
| ACCCTTACACCACACTAATT+CGG | - | chr3.2:50812189-50812208 | MS.gene04216:CDS | 40.0% | |
| AGAGATTAGATAAAACCGCG+AGG | - | chr3.2:50815191-50815210 | MS.gene04216:intron | 40.0% | |
| AGTGCAACATCAGTTGATCT+AGG | + | chr3.2:50813585-50813604 | None:intergenic | 40.0% | |
| ATAAACCTGCTTCGGAAATG+AGG | + | chr3.2:50815091-50815110 | None:intergenic | 40.0% | |
| ATCTGCTTGTAACCACACAT+TGG | - | chr3.2:50815673-50815692 | MS.gene04216:intron | 40.0% | |
| ATGCTGAAATGAAGGCAATG+TGG | + | chr3.2:50815053-50815072 | None:intergenic | 40.0% | |
| ATGTGTTGTGTTTGTGTGCA+TGG | - | chr3.2:50816044-50816063 | MS.gene04216:CDS | 40.0% | |
| ATTACCAGACTCATCTCTAG+AGG | + | chr3.2:50815023-50815042 | None:intergenic | 40.0% | |
| ATTAGTGTGGTGTAAGGGTT+TGG | + | chr3.2:50812188-50812207 | None:intergenic | 40.0% | |
| ATTGGTGGAATTAGTGTCAG+TGG | - | chr3.2:50814632-50814651 | MS.gene04216:intron | 40.0% | |
| CAATGATAGTATGGCATGCA+TGG | - | chr3.2:50814475-50814494 | MS.gene04216:intron | 40.0% | |
| CCTAAGAGATTATCCCAACT+TGG | + | chr3.2:50814938-50814957 | None:intergenic | 40.0% | |
| CTGTTTGTGGTCTATTTGGA+AGG | - | chr3.2:50814263-50814282 | MS.gene04216:intron | 40.0% | |
| CTTCCAAATAGACCACAAAC+AGG | + | chr3.2:50814265-50814284 | None:intergenic | 40.0% | |
| GAGAGCTTATGGAAATAAGC+TGG | + | chr3.2:50812698-50812717 | None:intergenic | 40.0% | |
| GAGAGGAAGAAGAAAAGCTT+TGG | + | chr3.2:50812314-50812333 | None:intergenic | 40.0% | |
| GGCCAATTTGTGTACGTATA+AGG | - | chr3.2:50813259-50813278 | MS.gene04216:CDS | 40.0% | |
| GGTTTGATGAACTTAGTGAC+GGG | - | chr3.2:50813165-50813184 | MS.gene04216:intron | 40.0% | |
| GTTATTGCAAGGCGTAATTG+TGG | - | chr3.2:50815555-50815574 | MS.gene04216:intron | 40.0% | |
| TAAACCTGCTTCGGAAATGA+GGG | + | chr3.2:50815090-50815109 | None:intergenic | 40.0% | |
| TCCAACAAGAATGTGATCTG+TGG | + | chr3.2:50813551-50813570 | None:intergenic | 40.0% | |
| TCTAGAGATGAGTCTGGTAA+TGG | - | chr3.2:50815022-50815041 | MS.gene04216:intron | 40.0% | |
| TGATCATGAATGAGGATGAG+AGG | - | chr3.2:50813342-50813361 | MS.gene04216:CDS | 40.0% | |
| TGGAATTGGTTGCATTGGAA+AGG | - | chr3.2:50814366-50814385 | MS.gene04216:intron | 40.0% | |
| TTACCGTGGAGAAAGAGATT+TGG | + | chr3.2:50812435-50812454 | None:intergenic | 40.0% | |
| TTCACACTGAAAACTAGTGC+AGG | - | chr3.2:50813217-50813236 | MS.gene04216:CDS | 40.0% | |
| TTGAGCTGCACAATATAACC+AGG | + | chr3.2:50815381-50815400 | None:intergenic | 40.0% | |
| TTGCCTGTTTGTGGTCTATT+TGG | - | chr3.2:50814259-50814278 | MS.gene04216:intron | 40.0% | |
| TTGGTGGAATTAGTGTCAGT+GGG | - | chr3.2:50814633-50814652 | MS.gene04216:intron | 40.0% | |
| TTTAGACAAAGAAGCAGTGG+AGG | - | chr3.2:50815320-50815339 | MS.gene04216:intron | 40.0% | |
| ! | ATAAGGTGGAGAGGTATATG+CGG | - | chr3.2:50813276-50813295 | MS.gene04216:CDS | 40.0% |
| ! | ATCTGGGATATGAGTCTGAT+TGG | - | chr3.2:50813991-50814010 | MS.gene04216:intron | 40.0% |
| ! | CCAAGTTGGGATAATCTCTT+AGG | - | chr3.2:50814935-50814954 | MS.gene04216:intron | 40.0% |
| !! | AGAAAAGCTTTGGTGTTGGT+AGG | + | chr3.2:50812304-50812323 | None:intergenic | 40.0% |
| !! | GAAAAGCTTTGGTGTTGGTA+GGG | + | chr3.2:50812303-50812322 | None:intergenic | 40.0% |
| !! | GCGGATATTGGGTTGATTAT+TGG | - | chr3.2:50814614-50814633 | MS.gene04216:intron | 40.0% |
| !! | GGTTCTTTTCGATTCGATTG+AGG | - | chr3.2:50812594-50812613 | MS.gene04216:intron | 40.0% |
| !! | TTTGGTGTTGGTAGGGTTTA+TGG | + | chr3.2:50812296-50812315 | None:intergenic | 40.0% |
| !!! | AACGATGTCGTTTTGGGATT+CGG | + | chr3.2:50812245-50812264 | None:intergenic | 40.0% |
| !!! | GTCTGATTTTTGCTGTTGTC+AGG | - | chr3.2:50814523-50814542 | MS.gene04216:intron | 40.0% |
| !!! | TGACTGAACGATGTCGTTTT+GGG | + | chr3.2:50812251-50812270 | None:intergenic | 40.0% |
| AACCCGGTTCTACAAAACTC+CGG | + | chr3.2:50815699-50815718 | None:intergenic | 45.0% | |
| AAGAGCGAGTGAGAGATGAA+CGG | + | chr3.2:50812381-50812400 | None:intergenic | 45.0% | |
| ACACTAATTCGGGTCGAATC+GGG | - | chr3.2:50812200-50812219 | MS.gene04216:CDS | 45.0% | |
| ACCCGAATTAGTGTGGTGTA+AGG | + | chr3.2:50812194-50812213 | None:intergenic | 45.0% | |
| ACTTAGAAGGATGGTAGCTG+GGG | - | chr3.2:50815596-50815615 | MS.gene04216:intron | 45.0% | |
| AGACTTAGAAGGATGGTAGC+TGG | - | chr3.2:50815594-50815613 | MS.gene04216:intron | 45.0% | |
| AGCCAAACTCTACTACCTGA+GGG | - | chr3.2:50816222-50816241 | MS.gene04216:CDS | 45.0% | |
| ATCCCTCAGGTAGTAGAGTT+TGG | + | chr3.2:50816227-50816246 | None:intergenic | 45.0% | |
| ATCTCTCACTCGCTCTTCAT+CGG | - | chr3.2:50812384-50812403 | MS.gene04216:intron | 45.0% | |
| CACACTAATTCGGGTCGAAT+CGG | - | chr3.2:50812199-50812218 | MS.gene04216:CDS | 45.0% | |
| CACTGAAAACTAGTGCAGGA+AGG | - | chr3.2:50813221-50813240 | MS.gene04216:CDS | 45.0% | |
| CCCGAATTAGTGTGGTGTAA+GGG | + | chr3.2:50812193-50812212 | None:intergenic | 45.0% | |
| CCCTTACACCACACTAATTC+GGG | - | chr3.2:50812190-50812209 | MS.gene04216:CDS | 45.0% | |
| CGGTAGACATAAACCTGCTT+CGG | + | chr3.2:50815099-50815118 | None:intergenic | 45.0% | |
| CTAGAGGATACATTCGTCTG+AGG | + | chr3.2:50815007-50815026 | None:intergenic | 45.0% | |
| CTCTTAAATTTGATGCGGGG+AGG | + | chr3.2:50815175-50815194 | None:intergenic | 45.0% | |
| CTTCATGATCCAGTGAAACC+CGG | - | chr3.2:50814699-50814718 | MS.gene04216:intron | 45.0% | |
| GAAAGAGATTTGGCGGAGAT+AGG | + | chr3.2:50812425-50812444 | None:intergenic | 45.0% | |
| GACTATGGGTCTGTTTGGAA+TGG | + | chr3.2:50812950-50812969 | None:intergenic | 45.0% | |
| GACTTAGAAGGATGGTAGCT+GGG | - | chr3.2:50815595-50815614 | MS.gene04216:intron | 45.0% | |
| GGTCTGGTATTGCGGATATT+GGG | - | chr3.2:50814603-50814622 | MS.gene04216:intron | 45.0% | |
| GTAGCATAAAGGTGACTGTC+TGG | - | chr3.2:50813043-50813062 | MS.gene04216:CDS | 45.0% | |
| TCCAGTGAAACCCGGTTATT+AGG | - | chr3.2:50814707-50814726 | MS.gene04216:intron | 45.0% | |
| TGGTGGAATTAGTGTCAGTG+GGG | - | chr3.2:50814634-50814653 | MS.gene04216:intron | 45.0% | |
| TGGTTGCATTGGAAAGGAAC+TGG | - | chr3.2:50814372-50814391 | MS.gene04216:intron | 45.0% | |
| TGTGTACGTATAAGGTGGAG+AGG | - | chr3.2:50813267-50813286 | MS.gene04216:CDS | 45.0% | |
| TTCAGATGCTAAGCAGAGCT+GGG | - | chr3.2:50814582-50814601 | MS.gene04216:intron | 45.0% | |
| ! | AGGCAATTCAGGTTCTGGTA+AGG | + | chr3.2:50815155-50815174 | None:intergenic | 45.0% |
| ! | AGTGCAGGAAGGTGTATGTT+TGG | - | chr3.2:50813232-50813251 | MS.gene04216:CDS | 45.0% |
| ! | GAGGTACCTGATATAAAGCC+TGG | - | chr3.2:50815360-50815379 | MS.gene04216:intron | 45.0% |
| ! | GGAAGGTGTATGTTTGGCAT+TGG | - | chr3.2:50813238-50813257 | MS.gene04216:CDS | 45.0% |
| ! | GGGCATTCATTTTATCCCTC+AGG | + | chr3.2:50816240-50816259 | None:intergenic | 45.0% |
| ! | GTAGGGTTTATGGTTTGCGA+AGG | + | chr3.2:50812286-50812305 | None:intergenic | 45.0% |
| ! | GTATCCTCTAGAGATGAGTC+TGG | - | chr3.2:50815016-50815035 | MS.gene04216:intron | 45.0% |
| !! | GTGACTGAACGATGTCGTTT+TGG | + | chr3.2:50812252-50812271 | None:intergenic | 45.0% |
| !! | TGAAGTGAAAGTGCTTACCG+TGG | + | chr3.2:50812449-50812468 | None:intergenic | 45.0% |
| !!! | ACGATGTCGTTTTGGGATTC+GGG | + | chr3.2:50812244-50812263 | None:intergenic | 45.0% |
| ACAAAACTCCGGCCAATGTG+TGG | + | chr3.2:50815688-50815707 | None:intergenic | 50.0% | |
| ACGAATCAGCCATGGCTTCA+CGG | - | chr3.2:50812335-50812354 | MS.gene04216:intron | 50.0% | |
| AGACAAAGAAGCAGTGGAGG+AGG | - | chr3.2:50815323-50815342 | MS.gene04216:intron | 50.0% | |
| AGTGGTACTTGAGTGCAGAG+TGG | - | chr3.2:50813432-50813451 | MS.gene04216:intron | 50.0% | |
| CCGCCAAATCTCTTTCTCCA+CGG | - | chr3.2:50812429-50812448 | MS.gene04216:intron | 50.0% | |
| CCGTGGAGAAAGAGATTTGG+CGG | + | chr3.2:50812432-50812451 | None:intergenic | 50.0% | |
| CGATTCGACCCGAATTAGTG+TGG | + | chr3.2:50812201-50812220 | None:intergenic | 50.0% | |
| CTCTTGCTTCGTCTACGCAT+CGG | - | chr3.2:50814430-50814449 | MS.gene04216:intron | 50.0% | |
| CTTCAGATGCTAAGCAGAGC+TGG | - | chr3.2:50814581-50814600 | MS.gene04216:intron | 50.0% | |
| GAAACACGCCTCTTGTTCTC+CGG | + | chr3.2:50815519-50815538 | None:intergenic | 50.0% | |
| GAGATTTGGCGGAGATAGGT+CGG | + | chr3.2:50812421-50812440 | None:intergenic | 50.0% | |
| GAGCCAAACTCTACTACCTG+AGG | - | chr3.2:50816221-50816240 | MS.gene04216:CDS | 50.0% | |
| GCCTAATAACCGGGTTTCAC+TGG | + | chr3.2:50814711-50814730 | None:intergenic | 50.0% | |
| GCTTGTAACCACACATTGGC+CGG | - | chr3.2:50815677-50815696 | MS.gene04216:intron | 50.0% | |
| GGAGGTGAAAGAACAGAGAG+AGG | - | chr3.2:50815341-50815360 | MS.gene04216:intron | 50.0% | |
| GGGTCTGGTATTGCGGATAT+TGG | - | chr3.2:50814602-50814621 | MS.gene04216:intron | 50.0% | |
| GTCCACACAAACCAGAACTG+TGG | + | chr3.2:50814552-50814571 | None:intergenic | 50.0% | |
| TCCTCTCTACGAATCAGCCA+TGG | - | chr3.2:50812327-50812346 | MS.gene04216:intron | 50.0% | |
| TTGGGATTCGGGTACTCGTT+CGG | + | chr3.2:50812233-50812252 | None:intergenic | 50.0% | |
| TTGTCCCTCATTTCCGAAGC+AGG | - | chr3.2:50815083-50815102 | MS.gene04216:intron | 50.0% | |
| ! | AGGCTGTGTCCTTTTGGTCT+GGG | - | chr3.2:50814802-50814821 | MS.gene04216:intron | 50.0% |
| ! | CTTAGCAGGCTGTGTCCTTT+TGG | - | chr3.2:50814796-50814815 | MS.gene04216:intron | 50.0% |
| ! | GGGGGTTTGGCATTTTTCGT+TGG | - | chr3.2:50814822-50814841 | MS.gene04216:intron | 50.0% |
| ! | TGGGTTTGCTTGCCTGTTTG+TGG | - | chr3.2:50814250-50814269 | MS.gene04216:intron | 50.0% |
| !! | AGGAAGTACCGGAGAACAAG+AGG | - | chr3.2:50815508-50815527 | MS.gene04216:intron | 50.0% |
| !! | CAGTTCTGGTTTGTGTGGAC+AGG | - | chr3.2:50814552-50814571 | MS.gene04216:intron | 50.0% |
| !! | GTCCACAGTTCTGGTTTGTG+TGG | - | chr3.2:50814547-50814566 | MS.gene04216:intron | 50.0% |
| !! | TGAACTTAGTGACGGGTGCA+TGG | - | chr3.2:50813172-50813191 | MS.gene04216:intron | 50.0% |
| !! | TGGCCGGAGTTTTGTAGAAC+CGG | - | chr3.2:50815693-50815712 | MS.gene04216:intron | 50.0% |
| AACCGCGAGGCACATTATGC+AGG | - | chr3.2:50815204-50815223 | MS.gene04216:intron | 55.0% | |
| AGAAGGATGGTAGCTGGGGT+TGG | - | chr3.2:50815600-50815619 | MS.gene04216:intron | 55.0% | |
| AGCGAGTGAGAGATGAACGG+AGG | + | chr3.2:50812378-50812397 | None:intergenic | 55.0% | |
| ATGCTAAGCAGAGCTGGGTC+TGG | - | chr3.2:50814587-50814606 | MS.gene04216:intron | 55.0% | |
| CAGAGCTGGGTCTGGTATTG+CGG | - | chr3.2:50814595-50814614 | MS.gene04216:intron | 55.0% | |
| CGATGCGTAGACGAAGCAAG+AGG | + | chr3.2:50814432-50814451 | None:intergenic | 55.0% | |
| GAAGAGTCTCCGTGAAGCCA+TGG | + | chr3.2:50812347-50812366 | None:intergenic | 55.0% | |
| GAAGGATGGTAGCTGGGGTT+GGG | - | chr3.2:50815601-50815620 | MS.gene04216:intron | 55.0% | |
| GCGTAGACGAAGCAAGAGGA+TGG | + | chr3.2:50814428-50814447 | None:intergenic | 55.0% | |
| GGAATTAGTGTCAGTGGGGC+AGG | - | chr3.2:50814638-50814657 | MS.gene04216:intron | 55.0% | |
| TGCCAAACCCCCAGACCAAA+AGG | + | chr3.2:50814814-50814833 | None:intergenic | 55.0% | |
| TGCCTGCATAATGTGCCTCG+CGG | + | chr3.2:50815209-50815228 | None:intergenic | 55.0% | |
| TTGATGCGGGGAGGCAATTC+AGG | + | chr3.2:50815166-50815185 | None:intergenic | 55.0% | |
| TTGCTTCGTCTACGCATCGG+TGG | - | chr3.2:50814433-50814452 | MS.gene04216:intron | 55.0% | |
| TTGTCAGGCGTCCACAGTTC+TGG | - | chr3.2:50814538-50814557 | MS.gene04216:intron | 55.0% | |
| ! | AGGTGGAGAGGTATATGCGG+TGG | - | chr3.2:50813279-50813298 | MS.gene04216:CDS | 55.0% |
| ! | CAGGCTGTGTCCTTTTGGTC+TGG | - | chr3.2:50814801-50814820 | MS.gene04216:intron | 55.0% |
| ! | CTGGTTTGTGTGGACAGGTC+AGG | - | chr3.2:50814557-50814576 | MS.gene04216:intron | 55.0% |
| ! | GCTGTGTCCTTTTGGTCTGG+GGG | - | chr3.2:50814804-50814823 | MS.gene04216:intron | 55.0% |
| ! | GGCTGTGTCCTTTTGGTCTG+GGG | - | chr3.2:50814803-50814822 | MS.gene04216:intron | 55.0% |
| ! | GTCCTTTTGGTCTGGGGGTT+TGG | - | chr3.2:50814809-50814828 | MS.gene04216:intron | 55.0% |
| !! | GCCATGGCTGATTCGTAGAG+AGG | + | chr3.2:50812331-50812350 | None:intergenic | 55.0% |
| !! | GGCCGGAGTTTTGTAGAACC+GGG | - | chr3.2:50815694-50815713 | MS.gene04216:intron | 55.0% |
| ! | CGGGGAGGCAATTCAGGTTC+TGG | + | chr3.2:50815160-50815179 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 50812166 | 50816267 | 50812166 | ID=MS.gene04216 |
| chr3.2 | mRNA | 50812166 | 50816267 | 50812166 | ID=MS.gene04216.t1;Parent=MS.gene04216 |
| chr3.2 | exon | 50815983 | 50816267 | 50815983 | ID=MS.gene04216.t1.exon1;Parent=MS.gene04216.t1 |
| chr3.2 | CDS | 50815983 | 50816267 | 50815983 | ID=cds.MS.gene04216.t1;Parent=MS.gene04216.t1 |
| chr3.2 | exon | 50813208 | 50813441 | 50813208 | ID=MS.gene04216.t1.exon2;Parent=MS.gene04216.t1 |
| chr3.2 | CDS | 50813208 | 50813441 | 50813208 | ID=cds.MS.gene04216.t1;Parent=MS.gene04216.t1 |
| chr3.2 | exon | 50813029 | 50813115 | 50813029 | ID=MS.gene04216.t1.exon3;Parent=MS.gene04216.t1 |
| chr3.2 | CDS | 50813029 | 50813115 | 50813029 | ID=cds.MS.gene04216.t1;Parent=MS.gene04216.t1 |
| chr3.2 | exon | 50812790 | 50812923 | 50812790 | ID=MS.gene04216.t1.exon4;Parent=MS.gene04216.t1 |
| chr3.2 | CDS | 50812790 | 50812923 | 50812790 | ID=cds.MS.gene04216.t1;Parent=MS.gene04216.t1 |
| chr3.2 | exon | 50812166 | 50812265 | 50812166 | ID=MS.gene04216.t1.exon5;Parent=MS.gene04216.t1 |
| chr3.2 | CDS | 50812166 | 50812265 | 50812166 | ID=cds.MS.gene04216.t1;Parent=MS.gene04216.t1 |
| Gene Sequence |
| Protein sequence |
