Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043442.t1 | XP_013465083.1 | 98.4 | 247 | 4 | 0 | 1 | 247 | 1 | 247 | 1.60E-141 | 511.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043442.t1 | Q6R567 | 49.2 | 252 | 107 | 7 | 11 | 247 | 7 | 252 | 4.3e-58 | 226.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043442.t1 | A0A072VCD2 | 98.4 | 247 | 4 | 0 | 1 | 247 | 1 | 247 | 1.2e-141 | 511.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36072 | MS.gene043442 | PPI |
MS.gene043442 | MS.gene34211 | PPI |
MS.gene043442 | MS.gene032302 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043442.t1 | MTR_2g090295 | 98.381 | 247 | 4 | 0 | 1 | 247 | 1 | 247 | 0.0 | 509 |
MS.gene043442.t1 | MTR_8g465910 | 57.647 | 255 | 89 | 7 | 1 | 247 | 1 | 244 | 2.29e-100 | 292 |
MS.gene043442.t1 | MTR_2g013550 | 41.346 | 208 | 100 | 5 | 37 | 232 | 24 | 221 | 6.18e-44 | 148 |
MS.gene043442.t1 | MTR_2g090330 | 64.545 | 110 | 29 | 2 | 37 | 146 | 30 | 129 | 7.36e-44 | 145 |
MS.gene043442.t1 | MTR_2g090330 | 64.545 | 110 | 29 | 2 | 37 | 146 | 27 | 126 | 9.20e-44 | 145 |
MS.gene043442.t1 | MTR_2g090325 | 61.538 | 130 | 33 | 5 | 25 | 150 | 1 | 117 | 2.52e-41 | 140 |
MS.gene043442.t1 | MTR_4g088875 | 40.196 | 204 | 97 | 7 | 38 | 232 | 29 | 216 | 2.64e-33 | 120 |
MS.gene043442.t1 | MTR_4g088870 | 36.134 | 238 | 100 | 10 | 18 | 247 | 6 | 199 | 5.59e-32 | 116 |
MS.gene043442.t1 | MTR_1g021895 | 52.128 | 94 | 33 | 3 | 37 | 128 | 27 | 110 | 9.94e-27 | 103 |
MS.gene043442.t1 | MTR_5g019300 | 50.562 | 89 | 36 | 2 | 40 | 128 | 35 | 115 | 8.44e-26 | 101 |
MS.gene043442.t1 | MTR_1g054260 | 33.803 | 142 | 90 | 4 | 14 | 152 | 60 | 200 | 1.06e-22 | 92.4 |
MS.gene043442.t1 | MTR_7g093390 | 46.392 | 97 | 40 | 4 | 32 | 126 | 160 | 246 | 1.64e-22 | 95.9 |
MS.gene043442.t1 | MTR_4g029440 | 38.462 | 130 | 65 | 4 | 8 | 129 | 86 | 208 | 1.58e-21 | 92.8 |
MS.gene043442.t1 | MTR_4g029440 | 38.462 | 130 | 65 | 4 | 8 | 129 | 92 | 214 | 1.69e-21 | 92.8 |
MS.gene043442.t1 | MTR_1g054280 | 41.176 | 102 | 51 | 3 | 27 | 126 | 61 | 155 | 2.22e-21 | 90.1 |
MS.gene043442.t1 | MTR_1g054465 | 34.545 | 110 | 70 | 2 | 19 | 126 | 34 | 143 | 4.14e-21 | 87.8 |
MS.gene043442.t1 | MTR_1g054210 | 46.667 | 75 | 32 | 2 | 36 | 108 | 116 | 184 | 5.65e-19 | 83.2 |
MS.gene043442.t1 | MTR_2g061230 | 34.951 | 103 | 58 | 2 | 29 | 129 | 94 | 189 | 2.92e-16 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043442.t1 | AT4G03510 | 46.789 | 218 | 102 | 5 | 35 | 247 | 41 | 249 | 4.96e-64 | 200 |
MS.gene043442.t1 | AT4G03510 | 46.789 | 218 | 102 | 5 | 35 | 247 | 41 | 249 | 4.96e-64 | 200 |
MS.gene043442.t1 | AT4G03510 | 46.789 | 218 | 102 | 5 | 35 | 247 | 41 | 249 | 4.96e-64 | 200 |
MS.gene043442.t1 | AT4G03510 | 46.789 | 218 | 102 | 5 | 35 | 247 | 41 | 249 | 4.96e-64 | 200 |
MS.gene043442.t1 | AT4G28270 | 40.991 | 222 | 82 | 8 | 34 | 247 | 13 | 193 | 1.98e-46 | 153 |
MS.gene043442.t1 | AT4G27470 | 42.857 | 203 | 90 | 10 | 40 | 232 | 42 | 228 | 8.76e-40 | 138 |
MS.gene043442.t1 | AT1G74990 | 45.370 | 108 | 47 | 3 | 32 | 137 | 9 | 106 | 1.79e-26 | 100 |
MS.gene043442.t1 | AT2G23780 | 35.185 | 216 | 115 | 8 | 40 | 245 | 26 | 226 | 1.89e-26 | 102 |
MS.gene043442.t1 | AT2G23780 | 35.185 | 216 | 115 | 8 | 40 | 245 | 26 | 226 | 1.89e-26 | 102 |
MS.gene043442.t1 | AT2G23780 | 35.185 | 216 | 115 | 8 | 40 | 245 | 26 | 226 | 1.89e-26 | 102 |
MS.gene043442.t1 | AT1G19310 | 49.438 | 89 | 37 | 2 | 40 | 128 | 21 | 101 | 3.89e-25 | 99.4 |
MS.gene043442.t1 | AT3G58030 | 42.308 | 104 | 47 | 3 | 25 | 126 | 120 | 212 | 6.85e-23 | 96.7 |
MS.gene043442.t1 | AT3G58030 | 42.308 | 104 | 47 | 3 | 25 | 126 | 120 | 212 | 6.85e-23 | 96.7 |
MS.gene043442.t1 | AT3G58030 | 42.308 | 104 | 47 | 3 | 25 | 126 | 120 | 212 | 6.85e-23 | 96.7 |
MS.gene043442.t1 | AT3G58030 | 42.308 | 104 | 47 | 3 | 25 | 126 | 120 | 212 | 6.85e-23 | 96.7 |
MS.gene043442.t1 | AT2G42030 | 43.519 | 108 | 45 | 4 | 36 | 138 | 133 | 229 | 2.76e-20 | 89.4 |
MS.gene043442.t1 | AT2G44410 | 39.560 | 91 | 40 | 2 | 40 | 126 | 123 | 202 | 1.78e-17 | 81.3 |
Find 66 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGTAAGATTGTATGAATT+TGG | 0.196085 | 2.2:+8922607 | None:intergenic |
AAAGGCAATGATCACCAATT+AGG | 0.249482 | 2.2:-8922886 | MS.gene043442:CDS |
TTTCTTCCAAGGAATCAATT+TGG | 0.278134 | 2.2:+8923184 | None:intergenic |
CTTTGGAAGGCGGCGTAGTT+TGG | 0.290827 | 2.2:+8922905 | None:intergenic |
GCAAGTGCTGAAGCAATTTC+AGG | 0.293695 | 2.2:-8923135 | MS.gene043442:CDS |
ATGATATATGCAAGGATCTT+TGG | 0.299279 | 2.2:-8922658 | MS.gene043442:CDS |
CCAAATTCATACAATCTTAC+AGG | 0.303928 | 2.2:-8922607 | MS.gene043442:CDS |
GTTGAGAATGATTCAGATAA+TGG | 0.311611 | 2.2:+8922758 | None:intergenic |
ATTAAGCCATTTGTAAATAC+AGG | 0.324784 | 2.2:+8923029 | None:intergenic |
GAGATTTCTGATTTGCATAC+TGG | 0.331060 | 2.2:+8922961 | None:intergenic |
TATGGAATAGCATTCAAAAT+AGG | 0.331156 | 2.2:+8922485 | None:intergenic |
CTGTAAGATTGTATGAATTT+GGG | 0.342103 | 2.2:+8922608 | None:intergenic |
GATACAAGTTATGGTGTCTT+TGG | 0.352630 | 2.2:-8922685 | MS.gene043442:CDS |
CTAGACCGCTTGGTCCTTCA+TGG | 0.359817 | 2.2:-8922849 | MS.gene043442:CDS |
TATGAACCAAATTGATTCCT+TGG | 0.361311 | 2.2:-8923190 | MS.gene043442:CDS |
TTGAGAATGATTCAGATAAT+GGG | 0.365252 | 2.2:+8922759 | None:intergenic |
AAGGCAATGATCACCAATTA+GGG | 0.391729 | 2.2:-8922885 | MS.gene043442:CDS |
GTGGTATGACACTCCCTAAT+TGG | 0.404265 | 2.2:+8922872 | None:intergenic |
TTTGCAGCATCAAGTGATCT+TGG | 0.413846 | 2.2:+8922814 | None:intergenic |
CATGAAGGACCAAGCGGTCT+AGG | 0.421483 | 2.2:+8922850 | None:intergenic |
ATGTTTCACAACATAATTCT+CGG | 0.424790 | 2.2:-8922792 | MS.gene043442:CDS |
ATCAAATGCCTTCTGATCCT+TGG | 0.432608 | 2.2:+8922574 | None:intergenic |
GATCCAGTGGTCACTCTTTG+TGG | 0.447780 | 2.2:-8923069 | MS.gene043442:CDS |
TAATTGGTGATCATTGCCTT+TGG | 0.448612 | 2.2:+8922888 | None:intergenic |
GCTGGCCCTGTATTTACAAA+TGG | 0.461498 | 2.2:-8923035 | MS.gene043442:CDS |
CTCCTCAAAATACTGATTGA+AGG | 0.463468 | 2.2:+8923215 | None:intergenic |
AATCCATTGGATACAAGTTA+TGG | 0.470449 | 2.2:-8922694 | MS.gene043442:CDS |
TTTGTGGTCATCTCTACTGC+TGG | 0.480977 | 2.2:-8923053 | MS.gene043442:CDS |
ATAACTTGTATCCAATGGAT+TGG | 0.488161 | 2.2:+8922696 | None:intergenic |
TAACTTGTATCCAATGGATT+GGG | 0.491781 | 2.2:+8922697 | None:intergenic |
ATGTATATATGTTTGTCACT+TGG | 0.494265 | 2.2:+8922632 | None:intergenic |
CTTTGACTGCAACATATGCT+TGG | 0.503274 | 2.2:-8923103 | MS.gene043442:CDS |
GTTTGGCCGCGGCCGTAGAG+TGG | 0.505416 | 2.2:+8922922 | None:intergenic |
TGGTGATCATTGCCTTTGGA+AGG | 0.521075 | 2.2:+8922892 | None:intergenic |
TCATCCCTTGTTCCACTCTA+CGG | 0.525770 | 2.2:-8922934 | MS.gene043442:CDS |
GGCACAAAACTGTGCAGCAA+AGG | 0.530934 | 2.2:+8922512 | None:intergenic |
AAGGCGGCGTAGTTTGGCCG+CGG | 0.530973 | 2.2:+8922911 | None:intergenic |
TGGTTCACTTCCCAATCCAT+TGG | 0.531511 | 2.2:-8922707 | MS.gene043442:CDS |
CGCGGCCGTAGAGTGGAACA+AGG | 0.543163 | 2.2:+8922929 | None:intergenic |
GAAGCAATTTCAGGTTCTAG+TGG | 0.551396 | 2.2:-8923126 | MS.gene043442:CDS |
CAAATTCATACAATCTTACA+GGG | 0.556632 | 2.2:-8922606 | MS.gene043442:CDS |
GTCATACCACCTAGACCGCT+TGG | 0.564556 | 2.2:-8922859 | MS.gene043442:CDS |
ACAAAACTGTGCAGCAAAGG+AGG | 0.566903 | 2.2:+8922515 | None:intergenic |
TCACCAATGCTTAACACAAG+TGG | 0.571713 | 2.2:-8922727 | MS.gene043442:CDS |
CAAACTACGCCGCCTTCCAA+AGG | 0.572732 | 2.2:-8922904 | MS.gene043442:CDS |
GGTAAGTTCGTCATCCATGA+AGG | 0.573904 | 2.2:+8922835 | None:intergenic |
ACACCATAACTTGTATCCAA+TGG | 0.574386 | 2.2:+8922691 | None:intergenic |
TGATCATTGCCTTTGGAAGG+CGG | 0.577497 | 2.2:+8922895 | None:intergenic |
ATAGCATTCAAAATAGGAGA+AGG | 0.585660 | 2.2:+8922491 | None:intergenic |
TCAGTAATCCAAGGATCAGA+AGG | 0.591994 | 2.2:-8922582 | MS.gene043442:CDS |
TGACCACAAAGAGTGACCAC+TGG | 0.593140 | 2.2:+8923066 | None:intergenic |
GATTTGCATACTGGACATTG+TGG | 0.605821 | 2.2:+8922970 | None:intergenic |
AAATCAAGAGAAGCAGAAGG+AGG | 0.609520 | 2.2:-8922995 | MS.gene043442:CDS |
GAACCACTTGTGTTAAGCAT+TGG | 0.612710 | 2.2:+8922724 | None:intergenic |
ATGCGAGCTGATAAGTCGCT+CGG | 0.619945 | 2.2:-8922553 | MS.gene043442:CDS |
TTAAGCCATTTGTAAATACA+GGG | 0.625086 | 2.2:+8923030 | None:intergenic |
TTACAGGGATCAGTAATCCA+AGG | 0.633705 | 2.2:-8922591 | MS.gene043442:CDS |
CGAAAATCAAGAGAAGCAGA+AGG | 0.635468 | 2.2:-8922998 | MS.gene043442:CDS |
TTGGTGAGATGATATATGCA+AGG | 0.649382 | 2.2:-8922666 | MS.gene043442:CDS |
TGAGAATGATTCAGATAATG+GGG | 0.649487 | 2.2:+8922760 | None:intergenic |
CTTGTGTTAAGCATTGGTGA+AGG | 0.649700 | 2.2:+8922730 | None:intergenic |
GAAGGACCAAGCGGTCTAGG+TGG | 0.660331 | 2.2:+8922853 | None:intergenic |
GGAGTGTGTGCAAGATCCAG+TGG | 0.671005 | 2.2:-8923082 | MS.gene043442:CDS |
CTTGTTCCACTCTACGGCCG+CGG | 0.675004 | 2.2:-8922928 | MS.gene043442:CDS |
GTCATCCATGAAGGACCAAG+CGG | 0.707584 | 2.2:+8922844 | None:intergenic |
GCGGCCGTAGAGTGGAACAA+GGG | 0.719279 | 2.2:+8922930 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATGTATATATGTTTGTCACT+TGG | + | chr2.2:8923088-8923107 | None:intergenic | 25.0% |
! | ATGTTTCACAACATAATTCT+CGG | - | chr2.2:8922925-8922944 | MS.gene043442:CDS | 25.0% |
! | ATTAAGCCATTTGTAAATAC+AGG | + | chr2.2:8922691-8922710 | None:intergenic | 25.0% |
! | CAAATTCATACAATCTTACA+GGG | - | chr2.2:8923111-8923130 | MS.gene043442:CDS | 25.0% |
! | CTGTAAGATTGTATGAATTT+GGG | + | chr2.2:8923112-8923131 | None:intergenic | 25.0% |
! | TTAAGCCATTTGTAAATACA+GGG | + | chr2.2:8922690-8922709 | None:intergenic | 25.0% |
! | TTGAGAATGATTCAGATAAT+GGG | + | chr2.2:8922961-8922980 | None:intergenic | 25.0% |
AATCCATTGGATACAAGTTA+TGG | - | chr2.2:8923023-8923042 | MS.gene043442:CDS | 30.0% | |
ATGATATATGCAAGGATCTT+TGG | - | chr2.2:8923059-8923078 | MS.gene043442:CDS | 30.0% | |
CCAAATTCATACAATCTTAC+AGG | - | chr2.2:8923110-8923129 | MS.gene043442:CDS | 30.0% | |
CCTGTAAGATTGTATGAATT+TGG | + | chr2.2:8923113-8923132 | None:intergenic | 30.0% | |
GTTGAGAATGATTCAGATAA+TGG | + | chr2.2:8922962-8922981 | None:intergenic | 30.0% | |
TGAGAATGATTCAGATAATG+GGG | + | chr2.2:8922960-8922979 | None:intergenic | 30.0% | |
TTTCTTCCAAGGAATCAATT+TGG | + | chr2.2:8922536-8922555 | None:intergenic | 30.0% | |
! | ATAACTTGTATCCAATGGAT+TGG | + | chr2.2:8923024-8923043 | None:intergenic | 30.0% |
! | TAACTTGTATCCAATGGATT+GGG | + | chr2.2:8923023-8923042 | None:intergenic | 30.0% |
! | TATGAACCAAATTGATTCCT+TGG | - | chr2.2:8922527-8922546 | MS.gene043442:CDS | 30.0% |
!! | TTCAATCAGTATTTTGAGGA+GGG | - | chr2.2:8922504-8922523 | MS.gene043442:CDS | 30.0% |
AAAAATCATCTCAGGAGATG+TGG | - | chr2.2:8922553-8922572 | MS.gene043442:CDS | 35.0% | |
AAAGGCAATGATCACCAATT+AGG | - | chr2.2:8922831-8922850 | MS.gene043442:CDS | 35.0% | |
AAGGCAATGATCACCAATTA+GGG | - | chr2.2:8922832-8922851 | MS.gene043442:CDS | 35.0% | |
CTTGGAAGAAAAATCATCTC+AGG | - | chr2.2:8922545-8922564 | MS.gene043442:CDS | 35.0% | |
GATACAAGTTATGGTGTCTT+TGG | - | chr2.2:8923032-8923051 | MS.gene043442:CDS | 35.0% | |
TTGGTGAGATGATATATGCA+AGG | - | chr2.2:8923051-8923070 | MS.gene043442:CDS | 35.0% | |
! | ACACCATAACTTGTATCCAA+TGG | + | chr2.2:8923029-8923048 | None:intergenic | 35.0% |
! | CTCCTCAAAATACTGATTGA+AGG | + | chr2.2:8922505-8922524 | None:intergenic | 35.0% |
! | CTGAGATGATTTTTCTTCCA+AGG | + | chr2.2:8922547-8922566 | None:intergenic | 35.0% |
! | CTTCTGCTTCTCTTGATTTT+CGG | + | chr2.2:8922721-8922740 | None:intergenic | 35.0% |
! | GAGATTTCTGATTTGCATAC+TGG | + | chr2.2:8922759-8922778 | None:intergenic | 35.0% |
! | TAATTGGTGATCATTGCCTT+TGG | + | chr2.2:8922832-8922851 | None:intergenic | 35.0% |
!! | CTTCAATCAGTATTTTGAGG+AGG | - | chr2.2:8922503-8922522 | MS.gene043442:CDS | 35.0% |
AAATCAAGAGAAGCAGAAGG+AGG | - | chr2.2:8922722-8922741 | MS.gene043442:CDS | 40.0% | |
ATCAAATGCCTTCTGATCCT+TGG | + | chr2.2:8923146-8923165 | None:intergenic | 40.0% | |
CGAAAATCAAGAGAAGCAGA+AGG | - | chr2.2:8922719-8922738 | MS.gene043442:CDS | 40.0% | |
CTTTGACTGCAACATATGCT+TGG | - | chr2.2:8922614-8922633 | MS.gene043442:CDS | 40.0% | |
GAACCACTTGTGTTAAGCAT+TGG | + | chr2.2:8922996-8923015 | None:intergenic | 40.0% | |
GATTTGCATACTGGACATTG+TGG | + | chr2.2:8922750-8922769 | None:intergenic | 40.0% | |
TCACCAATGCTTAACACAAG+TGG | - | chr2.2:8922990-8923009 | MS.gene043442:CDS | 40.0% | |
TCAGTAATCCAAGGATCAGA+AGG | - | chr2.2:8923135-8923154 | MS.gene043442:CDS | 40.0% | |
TTACAGGGATCAGTAATCCA+AGG | - | chr2.2:8923126-8923145 | MS.gene043442:CDS | 40.0% | |
TTTGCAGCATCAAGTGATCT+TGG | + | chr2.2:8922906-8922925 | None:intergenic | 40.0% | |
! | GGCCTTCAATCAGTATTTTG+AGG | - | chr2.2:8922500-8922519 | MS.gene043442:CDS | 40.0% |
!! | CTTGTGTTAAGCATTGGTGA+AGG | + | chr2.2:8922990-8923009 | None:intergenic | 40.0% |
!! | GAAGCAATTTCAGGTTCTAG+TGG | - | chr2.2:8922591-8922610 | MS.gene043442:CDS | 40.0% |
ACAAAACTGTGCAGCAAAGG+AGG | + | chr2.2:8923205-8923224 | None:intergenic | 45.0% | |
GCTGGCCCTGTATTTACAAA+TGG | - | chr2.2:8922682-8922701 | MS.gene043442:CDS | 45.0% | |
GGTAAGTTCGTCATCCATGA+AGG | + | chr2.2:8922885-8922904 | None:intergenic | 45.0% | |
GTGGTATGACACTCCCTAAT+TGG | + | chr2.2:8922848-8922867 | None:intergenic | 45.0% | |
TCATCCCTTGTTCCACTCTA+CGG | - | chr2.2:8922783-8922802 | MS.gene043442:CDS | 45.0% | |
TGGTGATCATTGCCTTTGGA+AGG | + | chr2.2:8922828-8922847 | None:intergenic | 45.0% | |
TGGTTCACTTCCCAATCCAT+TGG | - | chr2.2:8923010-8923029 | MS.gene043442:CDS | 45.0% | |
TTTGTGGTCATCTCTACTGC+TGG | - | chr2.2:8922664-8922683 | MS.gene043442:CDS | 45.0% | |
! | GCTTCTCTTGATTTTCGGCA+TGG | + | chr2.2:8922716-8922735 | None:intergenic | 45.0% |
! | TGATCATTGCCTTTGGAAGG+CGG | + | chr2.2:8922825-8922844 | None:intergenic | 45.0% |
!! | GCAAGTGCTGAAGCAATTTC+AGG | - | chr2.2:8922582-8922601 | MS.gene043442:CDS | 45.0% |
ATGCGAGCTGATAAGTCGCT+CGG | - | chr2.2:8923164-8923183 | MS.gene043442:CDS | 50.0% | |
GATCCAGTGGTCACTCTTTG+TGG | - | chr2.2:8922648-8922667 | MS.gene043442:CDS | 50.0% | |
GGCACAAAACTGTGCAGCAA+AGG | + | chr2.2:8923208-8923227 | None:intergenic | 50.0% | |
GTCATCCATGAAGGACCAAG+CGG | + | chr2.2:8922876-8922895 | None:intergenic | 50.0% | |
TGACCACAAAGAGTGACCAC+TGG | + | chr2.2:8922654-8922673 | None:intergenic | 50.0% | |
CAAACTACGCCGCCTTCCAA+AGG | - | chr2.2:8922813-8922832 | MS.gene043442:CDS | 55.0% | |
CATGAAGGACCAAGCGGTCT+AGG | + | chr2.2:8922870-8922889 | None:intergenic | 55.0% | |
CTAGACCGCTTGGTCCTTCA+TGG | - | chr2.2:8922868-8922887 | MS.gene043442:CDS | 55.0% | |
GGAGTGTGTGCAAGATCCAG+TGG | - | chr2.2:8922635-8922654 | MS.gene043442:CDS | 55.0% | |
GTCATACCACCTAGACCGCT+TGG | - | chr2.2:8922858-8922877 | MS.gene043442:CDS | 55.0% | |
! | CTTTGGAAGGCGGCGTAGTT+TGG | + | chr2.2:8922815-8922834 | None:intergenic | 55.0% |
CTTGTTCCACTCTACGGCCG+CGG | - | chr2.2:8922789-8922808 | MS.gene043442:CDS | 60.0% | |
GAAGGACCAAGCGGTCTAGG+TGG | + | chr2.2:8922867-8922886 | None:intergenic | 60.0% | |
GCGGCCGTAGAGTGGAACAA+GGG | + | chr2.2:8922790-8922809 | None:intergenic | 60.0% | |
AAGGCGGCGTAGTTTGGCCG+CGG | + | chr2.2:8922809-8922828 | None:intergenic | 65.0% | |
CGCGGCCGTAGAGTGGAACA+AGG | + | chr2.2:8922791-8922810 | None:intergenic | 65.0% | |
GTTTGGCCGCGGCCGTAGAG+TGG | + | chr2.2:8922798-8922817 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 8922498 | 8923241 | 8922498 | ID=MS.gene043442 |
chr2.2 | mRNA | 8922498 | 8923241 | 8922498 | ID=MS.gene043442.t1;Parent=MS.gene043442 |
chr2.2 | exon | 8922498 | 8923241 | 8922498 | ID=MS.gene043442.t1.exon1;Parent=MS.gene043442.t1 |
chr2.2 | CDS | 8922498 | 8923241 | 8922498 | ID=cds.MS.gene043442.t1;Parent=MS.gene043442.t1 |
Gene Sequence |
Protein sequence |