AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043961


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043961.t1 MTR_5g063730 93.054 907 22 2 1 870 1 903 0.0 1677
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043961.t1 AT1G22260 51.134 882 408 8 1 870 1 871 0.0 816
MS.gene043961.t1 AT1G22275 50.515 873 412 7 1 870 1 856 0.0 807
MS.gene043961.t1 AT1G22260 50.782 831 386 7 1 819 1 820 0.0 749
MS.gene043961.t1 AT1G22260 50.124 804 383 7 80 870 1 799 0.0 733
MS.gene043961.t1 AT1G22275 49.939 819 391 6 1 817 1 802 0.0 732
MS.gene043961.t1 AT1G22275 49.398 664 329 2 1 664 1 657 0.0 577

Find 123 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCCATACTTTGGATTTC+TGG 0.106313 5.3:+49911511 None:intergenic
TTCAGCTTTCTCCTCTAATT+TGG 0.139130 5.3:+49913105 None:intergenic
TTAACTTCTGGGTCCTCTTT+TGG 0.227517 5.3:+49911371 None:intergenic
CATAACCAGTGAACAGAAAT+TGG 0.250948 5.3:-49913596 MS.gene043961:CDS
ATTACCTTAACAACAGTTCT+AGG 0.252326 5.3:+49908704 None:intergenic
GAAGATGGAGATTGTCAAAT+TGG 0.257968 5.3:-49912384 MS.gene043961:CDS
AGGCTATTAATGACATTAAA+AGG 0.286706 5.3:-49912421 MS.gene043961:CDS
ATCCCTATGCATTTGATTAG+AGG 0.287687 5.3:-49907971 None:intergenic
GACTGAAAGCAAAGAAAATA+TGG 0.298375 5.3:-49912932 MS.gene043961:CDS
AGAAGGAAGATGAGAAATTA+TGG 0.298633 5.3:-49916087 MS.gene043961:CDS
AGTCACAATTTCCAAATTAG+AGG 0.303525 5.3:-49913116 MS.gene043961:CDS
TTTCACTGTGTTCAGCTTGC+AGG 0.305499 5.3:+49911779 None:intergenic
TCGTTGTACGGTTCAACTTC+GGG 0.306730 5.3:-49916592 MS.gene043961:CDS
TGTACTTCATAATAAGTTCT+TGG 0.314059 5.3:-49913326 MS.gene043961:CDS
ATTAAAAGAAGGAGTTCTTT+TGG 0.324408 5.3:-49909314 MS.gene043961:CDS
ATGCTTTAATCTGAGCTTCA+TGG 0.325526 5.3:+49911586 None:intergenic
GAAGCAGTTGATGCAGATTC+AGG 0.332231 5.3:-49912206 MS.gene043961:CDS
AAGTCTCAACTTCATATTCA+TGG 0.337259 5.3:+49908960 None:intergenic
TAACGAAAACGCGAAGCTTA+AGG 0.364613 5.3:-49916116 MS.gene043961:CDS
CATGTTAACTTCTAGTAGAT+TGG 0.371843 5.3:-49913695 MS.gene043961:CDS
GTCTTCTAAATTCTTTATCA+TGG 0.377090 5.3:+49913717 None:intergenic
TTTATCCAATTTCTGTTCAC+TGG 0.383394 5.3:+49913591 None:intergenic
GAAGTATGAATTAGAGAAGA+TGG 0.391033 5.3:-49912399 MS.gene043961:CDS
ACAGCTTCGGAACGTCTTAG+AGG 0.396330 5.3:-49912803 MS.gene043961:CDS
ATCGTTGTACGGTTCAACTT+CGG 0.402876 5.3:-49916593 MS.gene043961:CDS
CCCAGAAGTTAATTCAAAAC+AGG 0.404035 5.3:-49911360 MS.gene043961:intron
TGAAATTTGCTGCTGAAGAA+AGG 0.404224 5.3:-49915616 MS.gene043961:CDS
CAATCTTGAAGGATCACTTC+AGG 0.408264 5.3:-49913497 MS.gene043961:CDS
AGAGAATTTGAACTCAAAGT+TGG 0.408824 5.3:-49913668 MS.gene043961:CDS
GAGAAAGCTGAAATTCTGTT+AGG 0.410708 5.3:-49913094 MS.gene043961:CDS
GCTTCTGTTTCTTCAGAGTA+AGG 0.411855 5.3:+49909170 None:intergenic
CATCCTCGTCCTTCAAATAT+CGG 0.415294 5.3:-49908035 MS.gene043961:CDS
TATGAAGTTGAGACTTCTAA+TGG 0.417404 5.3:-49908953 MS.gene043961:CDS
CTATACTTCTTGCTTCAACT+TGG 0.417563 5.3:-49913398 MS.gene043961:CDS
TATTATGAAGTACATCATAC+TGG 0.421051 5.3:+49913335 None:intergenic
GGAGAGGATGAAAGTAGAGC+AGG 0.422359 5.3:-49912854 MS.gene043961:CDS
TACCCCTAGAACTGTTGTTA+AGG 0.431512 5.3:-49908708 MS.gene043961:intron
GCGTCTTGTTATAGCTGAAA+AGG 0.432285 5.3:-49915883 MS.gene043961:intron
TTCTTCAACAACTTCGGCAC+TGG 0.437261 5.3:+49909146 None:intergenic
CGTAGAAAACAATGTTTATG+AGG 0.441271 5.3:-49911614 MS.gene043961:intron
CAAGGCTATTGCAGCAATTG+AGG 0.447046 5.3:-49912272 MS.gene043961:CDS
AACAAATCACCGATATTTGA+AGG 0.451394 5.3:+49908026 None:intergenic
GAGAATTTGAACTCAAAGTT+GGG 0.456651 5.3:-49913667 MS.gene043961:CDS
CAGAAAATAAACAATCTTGA+AGG 0.457143 5.3:-49913508 MS.gene043961:CDS
TACTAAGCTTAAGAAATCTC+TGG 0.457644 5.3:-49916179 MS.gene043961:CDS
CTCACCTTTCTATGATGCTT+AGG 0.460786 5.3:+49909086 None:intergenic
ATCTTCAGATTCCGTTTCAT+CGG 0.462299 5.3:-49916530 MS.gene043961:CDS
TGCTGAGAGAATTCAGCGTT+TGG 0.465844 5.3:-49913182 MS.gene043961:CDS
TTACCTTAACAACAGTTCTA+GGG 0.473223 5.3:+49908705 None:intergenic
GAAGAACAATTACAAAGAAA+AGG 0.477258 5.3:-49908931 MS.gene043961:CDS
AACGTAAAACCAGGAAAAGC+AGG 0.477327 5.3:-49909116 MS.gene043961:CDS
TAGAAATCAATACGATCAAA+TGG 0.477543 5.3:-49912582 MS.gene043961:CDS
GAAATTTGCTGCTGAAGAAA+GGG 0.478421 5.3:-49915615 MS.gene043961:CDS
AATATCTCAGAGAAATGATC+AGG 0.479619 5.3:-49912519 MS.gene043961:intron
ACAAGGAAGTCCTACAGCTT+CGG 0.481187 5.3:-49912816 MS.gene043961:CDS
AAAAGAACAGGAAAAGAAGC+TGG 0.481953 5.3:-49912755 MS.gene043961:CDS
GGAAATTGATACTCTGCAAA+AGG 0.483387 5.3:-49912875 MS.gene043961:CDS
TGAAGCTTTAATCTCAAAGA+AGG 0.488627 5.3:-49913149 MS.gene043961:CDS
TCTTCAGATTCCGTTTCATC+GGG 0.489312 5.3:-49916529 MS.gene043961:CDS
CGCGAAACTTCCCGATGAAA+CGG 0.489834 5.3:+49916519 None:intergenic
TCCACTTTCTTCAACAACTT+CGG 0.490669 5.3:+49909140 None:intergenic
TGTTATAGCTGAAAAGGATA+AGG 0.495700 5.3:-49915877 MS.gene043961:intron
GCCGAAGTTGTTGAAGAAAG+TGG 0.497962 5.3:-49909141 MS.gene043961:CDS
GAATCTATCGAGGCTCTTCG+AGG 0.498143 5.3:+49916618 None:intergenic
GTACCTCTAATCAAATGCAT+AGG 0.499381 5.3:+49907968 None:intergenic
TGCAAATGTTATAGAAGAGA+AGG 0.500758 5.3:-49915561 MS.gene043961:CDS
AGAAAGTGTCTCTTTCGTGC+TGG 0.501908 5.3:+49913374 None:intergenic
CAGCAGCAGTTAATAATGAC+CGG 0.503791 5.3:+49912624 None:intergenic
GCATAGGGATCATCTGCATA+AGG 0.508953 5.3:+49907984 None:intergenic
CTATCGAGGCTCTTCGAGGT+TGG 0.511880 5.3:+49916622 None:intergenic
AGGCTTTGCTGCAGTTGCAA+TGG 0.513603 5.3:-49911412 MS.gene043961:CDS
AAGAAGTACTGTCTTGTTCG+AGG 0.515969 5.3:-49908903 MS.gene043961:intron
CCGTTTCATCGATTAAAAGA+AGG 0.516324 5.3:-49909325 MS.gene043961:CDS
TACTGAGACTCTTCAACAGT+TGG 0.516978 5.3:-49916014 MS.gene043961:CDS
AGAAAATATGGAAAGAATGC+AGG 0.520425 5.3:-49912920 MS.gene043961:CDS
ACTGTGCTACAGTAGACTCT+TGG 0.521176 5.3:+49913227 None:intergenic
TACCTCTAATCAAATGCATA+GGG 0.522542 5.3:+49907969 None:intergenic
AAGGCTATTGCAGCAATTGA+GGG 0.526951 5.3:-49912271 MS.gene043961:CDS
AGTTTGAATGAACAGATGAA+TGG 0.529976 5.3:-49915810 MS.gene043961:CDS
TCAGGAGGAACACGCTAAGC+TGG 0.530118 5.3:-49912188 MS.gene043961:intron
CAGAGTGCAAAGAAGAATCA+AGG 0.533124 5.3:-49912228 MS.gene043961:CDS
TGAAGGATCACTTCAGGAGA+TGG 0.533658 5.3:-49913491 MS.gene043961:CDS
TGAGTGTAGGAAGCTAGAAG+AGG 0.536020 5.3:-49911544 MS.gene043961:CDS
GCTGATCTTGCTGAAAAGCT+TGG 0.538124 5.3:-49913541 MS.gene043961:CDS
TGCAGCAGGAACATGATAAG+AGG 0.539558 5.3:-49911810 MS.gene043961:CDS
GTTAGGAAGTGTTAGATCAT+CGG 0.542953 5.3:-49913077 MS.gene043961:CDS
GATAGATTCAAATCGTTGTA+CGG 0.547193 5.3:-49916604 MS.gene043961:CDS
GAGACTCTTCAACAGTTGGC+TGG 0.549714 5.3:-49916010 MS.gene043961:CDS
GATGAGTGACAAGCCAAAAG+AGG 0.555709 5.3:-49911384 MS.gene043961:CDS
AATGGTAGAGAATAAGCAGT+TGG 0.569544 5.3:-49912564 MS.gene043961:CDS
ATTAGTGAAAGAGCAAGCTT+CGG 0.570880 5.3:-49916363 MS.gene043961:CDS
CGATGATGATAACGGTTTCG+CGG 0.572240 5.3:+49916567 None:intergenic
TTCATTGATGCAGAGTCAGA+GGG 0.572866 5.3:-49908066 MS.gene043961:intron
CATTCCTAAGCATCATAGAA+AGG 0.573980 5.3:-49909090 MS.gene043961:intron
ACAGGTTACTCATATGCAGC+AGG 0.576637 5.3:-49911824 MS.gene043961:intron
TTTCATTGATGCAGAGTCAG+AGG 0.580175 5.3:-49908067 MS.gene043961:intron
TAGATCATCGGAGAACCAAA+TGG 0.581804 5.3:-49913065 MS.gene043961:intron
GCAATCGCAATGCAGAAGCT+AGG 0.583781 5.3:-49916652 None:intergenic
GAAGATGAGAAATTATGGAA+AGG 0.591854 5.3:-49916082 MS.gene043961:CDS
GAAAACAGATCTTGATATTG+CGG 0.595808 5.3:-49916339 MS.gene043961:intron
CGATATTTGAAGGACGAGGA+TGG 0.598823 5.3:+49908036 None:intergenic
GTGAACTTGAAGATGAGTGT+AGG 0.599411 5.3:-49911557 MS.gene043961:CDS
TTTCATCAAACTTGTTGACA+AGG 0.602547 5.3:+49913431 None:intergenic
GCAAATGTTATAGAAGAGAA+GGG 0.608131 5.3:-49915560 MS.gene043961:intron
GCAGAGATCGATGATGATAA+CGG 0.608733 5.3:+49916559 None:intergenic
GCGAATCTGAAGCTAACCGC+AGG 0.609242 5.3:-49916499 MS.gene043961:intron
TACCTTAACAACAGTTCTAG+GGG 0.611278 5.3:+49908706 None:intergenic
AAGCTCAGATTAAAGCATTG+AGG 0.620114 5.3:-49911581 MS.gene043961:CDS
TTGATACTCTGCAAAAGGAG+AGG 0.623737 5.3:-49912870 MS.gene043961:CDS
CTAAGACGTTCCGAAGCTGT+AGG 0.625259 5.3:+49912806 None:intergenic
GAAGCTTAAGGTGAAGCAGA+AGG 0.628133 5.3:-49916104 MS.gene043961:CDS
TTGGCTGGTATCGTTCAAGA+TGG 0.632425 5.3:-49915995 MS.gene043961:intron
AGACATATTGAAGAAATCAG+AGG 0.633777 5.3:-49912896 MS.gene043961:CDS
TCACCGATATTTGAAGGACG+AGG 0.642715 5.3:+49908032 None:intergenic
CTATTGCAGCAATTGAGGGA+AGG 0.643200 5.3:-49912267 MS.gene043961:CDS
ATCGCAATGCAGAAGCTAGG+AGG 0.647783 5.3:-49916649 None:intergenic
AGCTGAAAATGAACTGAGAG+AGG 0.664957 5.3:-49911734 MS.gene043961:intron
AAAGTGGAGAACGTAAAACC+AGG 0.676173 5.3:-49909125 MS.gene043961:CDS
GCAGTTGATGCAGATTCAGG+AGG 0.680437 5.3:-49912203 MS.gene043961:CDS
ACAACGATTTGAATCTATCG+AGG 0.692543 5.3:+49916608 None:intergenic
TACTGTAGCACAGTATACAG+AGG 0.696306 5.3:-49913218 MS.gene043961:CDS
GTAAAACCAGGAAAAGCAGG+AGG 0.707258 5.3:-49909113 MS.gene043961:CDS
GCTGGAAGATCAGATCACAG+AGG 0.771101 5.3:-49912737 MS.gene043961:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.3 gene 49907974 49916665 49907974 ID=MS.gene043961
chr5.3 mRNA 49907974 49916665 49907974 ID=MS.gene043961.t1;Parent=MS.gene043961
chr5.3 exon 49916500 49916665 49916500 ID=MS.gene043961.t1.exon1;Parent=MS.gene043961.t1
chr5.3 CDS 49916500 49916665 49916500 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49916340 49916389 49916340 ID=MS.gene043961.t1.exon2;Parent=MS.gene043961.t1
chr5.3 CDS 49916340 49916389 49916340 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49915996 49916203 49915996 ID=MS.gene043961.t1.exon3;Parent=MS.gene043961.t1
chr5.3 CDS 49915996 49916203 49915996 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49915766 49915891 49915766 ID=MS.gene043961.t1.exon4;Parent=MS.gene043961.t1
chr5.3 CDS 49915766 49915891 49915766 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49915561 49915659 49915561 ID=MS.gene043961.t1.exon5;Parent=MS.gene043961.t1
chr5.3 CDS 49915561 49915659 49915561 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49913066 49913742 49913066 ID=MS.gene043961.t1.exon6;Parent=MS.gene043961.t1
chr5.3 CDS 49913066 49913742 49913066 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49912738 49912986 49912738 ID=MS.gene043961.t1.exon7;Parent=MS.gene043961.t1
chr5.3 CDS 49912738 49912986 49912738 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49912520 49912648 49912520 ID=MS.gene043961.t1.exon8;Parent=MS.gene043961.t1
chr5.3 CDS 49912520 49912648 49912520 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49912373 49912441 49912373 ID=MS.gene043961.t1.exon9;Parent=MS.gene043961.t1
chr5.3 CDS 49912373 49912441 49912373 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49912189 49912299 49912189 ID=MS.gene043961.t1.exon10;Parent=MS.gene043961.t1
chr5.3 CDS 49912189 49912299 49912189 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49911735 49911842 49911735 ID=MS.gene043961.t1.exon11;Parent=MS.gene043961.t1
chr5.3 CDS 49911735 49911842 49911735 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49911521 49911631 49911521 ID=MS.gene043961.t1.exon12;Parent=MS.gene043961.t1
chr5.3 CDS 49911521 49911631 49911521 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49911361 49911447 49911361 ID=MS.gene043961.t1.exon13;Parent=MS.gene043961.t1
chr5.3 CDS 49911361 49911447 49911361 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49909289 49909354 49909289 ID=MS.gene043961.t1.exon14;Parent=MS.gene043961.t1
chr5.3 CDS 49909289 49909354 49909289 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49909091 49909198 49909091 ID=MS.gene043961.t1.exon15;Parent=MS.gene043961.t1
chr5.3 CDS 49909091 49909198 49909091 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49908904 49908990 49908904 ID=MS.gene043961.t1.exon16;Parent=MS.gene043961.t1
chr5.3 CDS 49908904 49908990 49908904 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49908709 49908768 49908709 ID=MS.gene043961.t1.exon17;Parent=MS.gene043961.t1
chr5.3 CDS 49908709 49908768 49908709 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
chr5.3 exon 49907974 49908075 49907974 ID=MS.gene043961.t1.exon18;Parent=MS.gene043961.t1
chr5.3 CDS 49907974 49908075 49907974 ID=cds.MS.gene043961.t1;Parent=MS.gene043961.t1
Gene Sequence

>MS.gene043961

ATGCAGAAGCTAGGAGGATTTCCAACCTCGAAGAGCCTCGATAGATTCAAATCGTTGTACGGTTCAACTTCGGGAACCGCGAAACCGTTATCATCATCGATCTCTGCGCGTCAATCTTCAGATTCCGTTTCATCGGGAAGTTTCGCGAATCTGAAGCTAACCGCAGGTTTTGATTCTGATTTCACTTCGATTTCCGTTTTTTTCTGCTTCTATTCATCGTAATCGGAAAATTTGATCGTAATTTTGCAATGCGGTGTTTGATTTCTTCGTGTGCAGAGAAATTAGTGAAAGAGCAAGCTTCGGTGAAAACAGATCTTGATATTGCGGTACGATATGATTCTAATTTGTGATTCTGCGTGTAATTTAAGAAGTAGAATGCTTGAATTTTGAAATGTATGAAACTTAGGGTTTTGTTTTGTTGTTGTAATGAACGGTTATTAATTTCTTGCTGTTAATTTGAAGAATACTAAGCTTAAGAAATCTCTGGAGCATATTCGTGCATTAGAAGAAAAATTGCAGAATGCATTTAACGAAAACGCGAAGCTTAAGGTGAAGCAGAAGGAAGATGAGAAATTATGGAAAGGACTTGAATCTAAGTTCTCGTCGACTAAGACTTTGTGTGATCAACTTACTGAGACTCTTCAACAGTTGGCTGGTATCGTTCAAGATGGTAAGTATGAAGATTCACTCACTCGGTTTTTCCTATTTTGCTTTTTGTTCTTTTTTTTTGGTATGTAATTAGTTAATTGTTTCTTTTATTGCGTCTTGTTATAGCTGAAAAGGATAAGGAAAAATTGGAAAATAAACTCTCAGCAAGTTCAGAAGCTCTTGAGAGTTTGAATGAACAGATGAATGGTTTGTCTTTGAAGCTAGATTCTACAGACGAAACAATTAAAGCTCGTAAGTTCTTTTTGTTAGTTTTAAATTTAGTTAAAAAGTCGATCTGAAAAGTTGATTGGTTTGAGGTTCTGAATTCTAATGAAATATATTGTTATCCTTATTACAGGTGATAATGAGCTAGAGAAGCTGAAATTTGCTGCTGAAGAAAGGGAAAAGTTTCACAGTGATGAAAAGTGCAGAGCTGCAAATGTTATAGAAGAGAAGGGTGAGAGTTAAATTGCAAATGACTATTTTGAAGAAATAATATGCAATGTTTTGAATGTTTTATATCAAGAATAGGAATAATTAATGATGATATAGTGAAACATGAAGGATGTCTAAAAGTTTTGGTCCAGTAGGTTCATAAGTTCTGTATGTGTGTGTGTGTGCGTGTCTAATGAATTTAGGAATGAATGATATATTTAAGTAGTTTCATGTTAGAAAGGTCATTGATCTTTTGGTCACCAAGGGTCTTACACTCAGTTTTATTGTGTATATTACATACAATATATTTTTTGTTGATAGTTTATCATCTTATATAGTATTTATTCTTTTGTGAGTCTGATTTAGTGGTGGGGATACTCTTTCTTGTATAAAAATCTAAGGTTTCATTATGGAACTCTAGTGGAAGTTGGCATAAAGTAGTGTTTTTATTTATTTTTTTAATTTTTTGACCAATGCATAACGTAGTGTTAATCATCTCTTTGTCTGGATTTCAAACCCTGAAGACATTTCTGTGAGTTGGCATGTTAGAGAAGTATTTTTTTGTCATTCTTATTCAAGGTAAAAATATAGAAATAGTCTATAAAATAAAGCCTGTAATTTGAATCATTAATCAATAATATTCAGATTAGTCAAACCTTTCAAGTTGCTATCAAAACTCTTGATCTGGGATGCTTTGCATCTGCATCAAAACGTTAGCTACTTCACACACACTAAATAGGAAACTAGAGCAGAAGACTCTGATCGACGTAGTTTGAAAGTCATCTTTAACTAATGCTTCTGGTGAGGGTACTGAACCAAACAATCAATGACTCCCCCTCCACCATAGGGATGTCAGAATTACCGATAGTCTGGTTTTGAATTGAATTGGCGCATTTGTGGAGATCATGGAGAATGAATATCTCAAACATGGTATTGAATTTAGCCAATGACCTTTCTGCTCACCAACAACCAGAGCCATCTAGAACTCCTCATTGGTGGTCTGTACTTTGTTCAGGTAACTAGGTAGGTCACGGTCAGACATCTTAAGTGTGCTAGGCTATGGTCTGACTCATACAGCTGGCAGTATATCATTAGCATAACCATTTTAAACCTTTTCCATGCATCATAACATGTTTTTGAAGGACGAAAATGTAGCATGAATTTGGTTCAATGTACTATCATACATTTTTTTATTTCTTAGTGAGGTTTAAGGACGACCTGGGACCAAAGCCAAACTTTCACAGCATGACCTCGGTCCAAACAATTCCTGTCATTTTGTTAAAGATTTAGAATTGTTTTATACATGTGTAGACCATATAACTCTATTTATATTGATATTATGACTAAACAAATACTTAAATTCTCTTCTTAATGTGTACAACAAGTTGATAATGACTTTACACGTAAGAGTTTCTTCCTAACTTAATACTATGTTGCATTCCTTAAGAACTGACATGTAAAAGTAAACTACTCCTTGATGTTTACTTGGAAAAGGCTGAATAAGATGTTTAAAAATTGACTTAATGTTAAAAAAACATAAAGATGTCTCCTTATATGTTCTAGAGAGACTCATAGTAAATGTCATGGACTAAGGTAACATAGTAAATGTCTCCTTAAGAACATAGTAAATGTTCAAGATGTCTAACGTGGTAGTAGGTTCAGTATTTTTCTTCTGTGCCACATCATATTACATCAAATCAATATTAATATAAAACTATTTGGTCTTTTTTATATTTTCGTACTTTCCCTCAAATCCTTATAACTTCATCGTAGTGAATATTCATAATCTTCAAGTTGCTACTAATTTGTATTGTCTTATGGAATGCTAATTTGTTTGCAGATACCATGATAAAGAATTTAGAAGACATGTTAACTTCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAGTTGGGAGAGCTTCACCTTCAAATAAAAGTCAAAGATGAAGAAATTACACATCACATAACCAGTGAACAGAAATTGGATAAAGAAAAAAGTGATCTGCAATTGTGCAATGCTGATCTTGCTGAAAAGCTTGGCACGTCACTTCAGAAAATAAACAATCTTGAAGGATCACTTCAGGAGATGGCTGCACAATTATTGAATTTAGACAAAGAAAGCTTGAACCTTGTCAACAAGTTTGATGAAATGAACTCTCTCTATACTTCTTGCTTCAACTTGGTCCAGCACGAAAGAGACACTTTCTCGAAGCATGCTCAAAACCAGTATGATGTACTTCATAATAAGTTCTTGGTATTGTCATCAGAAAAAGATGAAATTCATATGACAAATCAAGAGTTAAGAAGTAGTTTGAATGATCTTCGTAAAGTCCAAGAGTCTACTGTAGCACAGTATACAGAGGATTGTCGATTAGCTGCTGAGAGAATTCAGCGTTTGGAGTCAGAAGCTGAAGCTTTAATCTCAAAGAAGGCAGAAGCAGAAGTCACAATTTCCAAATTAGAGGAGAAAGCTGAAATTCTGTTAGGAAGTGTTAGATCATCGGAGAACCAAATGGTATTATCGTTAATTAGCTTTATTTAACAGAATATCAACAAACATTGTGTTCGTTACTTTTATATTTAATGCTTTGCAGCAAGGTCTACTGCTCAAAATTTCAGCTCTAGAGACTGAAAGCAAAGAAAATATGGAAAGAATGCAGGCAGACATATTGAAGAAATCAGAGGAAATTGATACTCTGCAAAAGGAGAGGATGAAAGTAGAGCAGGATGCAGACTCTTTTGACAAGGAAGTCCTACAGCTTCGGAACGTCTTAGAGGAAAAAGAACAATGCATTTTGCAGCAAAAAGAACAGGAAAAGAAGCTGGAAGATCAGATCACAGAGGTTTTAGAGAAAAAATATAGTGCATGCTGCAATTTCCTGACTGGTGTTTGTATACCATTGCCAAATAAGTTTTTTGCATGCCTTTGCAGAACCGGTCATTATTAACTGCTGCTGAAAGTAAACTCGCAGAAGCTAGAAATCAATACGATCAAATGGTAGAGAATAAGCAGTTGGAATTGTCAAAGCATTTAAAAGAAATATCTCAGAGAAATGATCAGGTGTTGCATATAACTGGTTACCTATAATAGGTGCTTGATGTACTGTGCAATAAGTTCTCATAACATGCATTTGAACAGGCTATTAATGACATTAAAAGGAAGTATGAATTAGAGAAGATGGAGATTGTCAAATTGGAAAAAGACAAGGTTTGATATGATATATTAGTCTTTACAGCAATTACTCTCCACTGAAACATTTTTAACCAATTTTAACCTCCAGGCTGACAAGGCTATTGCAGCAATTGAGGGAAGGTGTGACCAAAAACTTGCAGAGTGCAAAGAAGAATCAAGGAAGCAGTTGATGCAGATTCAGGAGGAACACGCTAAGCTGGTATCTATTAAAAAAATATAGAATTAAAATTATTGACTTACAATATTTTGGTGTTTCATTGAGATTAAAAGTTGTCTTTATGAAAATAATTCAAATAACCCCTATTTATTTAAACAATTCAAATATTTCGTAATTTGTACTTACACTATTCAATCACGTGATAGTGTAATTTGATCGAAGTGAATTGGAGTTTATAAATTACTCTTTTTGGGGTGGTTATGCACCTCATGTGTGCTGTGACGAGATGATGTTATTGCATCACTACTTTCTTAGTATGAGATTTGCTTAACATTAAGTTGAGAAACATCCAAATACTAGGTAAGCTTATTTCCTGTCCAATCTACAGGTTACTCATATGCAGCAGGAACATGATAAGAGGCAACTATGCCTGCAAGCTGAACACAGTGAAAAGTTAAAGCGTGCTCAACTGCAAGCTGAAAATGAACTGAGAGAGGTGTAATACACACACACACACTCACAAAATAAGACCTGAGCTATATAATATGTATACAAATTTACTTCATCTGCTGATATCCTGATACCTTGATTACACGTAGAAAACAATGTTTATGAGGAATGACCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTAGGAAGCTAGAAGAGGAGTTGCATCTCCAGAAATCCAAAGTATGGAATACCTATGATAAATTAATCACATCACAAACTGTGATTTTTAATATTTTTTTTGCAATATTTTCAGGAAGAAAGGCAAAAGGCTTTGCTGCAGTTGCAATGGAAAGTGATGAGTGACAAGCCAAAAGAGGACCCAGAAGTTAATTCAAAACAGGTTGGTTCGTGTAACCAGTCTCTCTGTGTCTGTCTCCGTTAGTTTATTTGCATGTTAGGATACAAATATATTATGTTTGTCAGATCATTTTTATATCTTGTAATATATATGTCTGCTATAACCCAAAAATATCACTGAAGCTAACTCGATGATTCATATTGTGGCTCTATTTTAATTTTTAACTATATTTAAATTAAGGGAATATATTATTTCAGTGATTGAATGATTGCATAGGATCAAGAATAGTCATTTTGTATTATATTCAGATAAGGTCGCCACTGTCTGGTAATAATCTGTCTGACTCAACAGGCTCTACGGAATAGTAGGAATACCGTTAGTTTAATTTATTGGAATTTAAAATTAACTAGTGATTGCTGACTGCATTGGATCAAGAATAGTCATTTTGTATTATATTCACATAAGGTCGCTACTGTCTGCGGTAATGATCTGTCTGACTCAACAGGCTCTAGGGAATAGTAGGGATACTGTCAGTTTAATGTATTAGAATTATGAATTAACTGGGCCTAATATAAAGCTAAACGATTGGCCAAGTCATTAATGGGTACATTGGCTATACCTGGCCAATGCGGGATCTTTTGGTAGACAAGGTTCCGGAAATGACGACAAGGTCAGGGAAATGAGAAGATATTTTTTTGTTCAATTGTAACCTAAAATTGCTTCAATTTTCTTTATATTTTTTTTTACACAATCCTATCAGCTGTGAACTTATTTGCTCGGAATAATAATGGAAATAAGAATGCACTGCTTCATATTTATATTCTTTATGATTATCTTGTCACATATAGGCATAATATGGTTTCTTATAGCTTGACTATTTTGTAATGACAATTTACTAGCATGCTATTAGATGGTTTCTTGCAGCTGTATTGAAATTTAAGTTGAAAATTTTTATTGACGATTTTGCATATAAAAGGGTGTAGGTTAACAACAGAGCTCCCTCCCAAGGTTTTATATTGGAGCAGCAATCTTGTTTTCTTGATAATGATAATAGATATTGGTTTGATTATCATTTGTGTATATCAGTGGTTATATAATGGTATTTGCCATTCTATTCATAAATTGTTTCAAGTTTTGAAGTATAAAGATAACTGCTACAGTAAGTAGTAGAATTCGCTACGTAGGCTTTGTTTAGTACAATTAGGATAAGTTAATTAACAACCATAAAGGTAATTGATAGTAGATCAATTAAGTTTTAGCAAAAAGATATTAGCTGAAAAATAGTTGAGATAATTTCAAGTATTTAGGAAATGTTTATATTTTTGTATAATTAATTTAATATAATTATTAATTTTTATACTAATTTCAACTTATTTATTATCTTAAAAATTGGAATATTATTTTTTATTATTTATAATTTTTAAATATTTTTATCAAATGAAATGAGATGATATGATTGAAATGATAAGTTCATCTAATATTTTTTATTATAATTTTAACATGTTTTGGTACATAAAGATACATTCTCTGTTCTGTAAAAGCAAATATGCTCTATATTATGTTCTATCATAATTATGTATCTGGCTAATGAAATTAGTCTTTAAATATATAATTTTTTAATTACATGAATTTTTAATTTTTATAATTTAAAGAATAAATATATTTCGAAAAATGACTGTATTCTATTTTTTTGTTTTAAGAGAGGGATAAAGCGAAATTTGATTAAAATATTCTATTTTCACCTTTAAAGATGAATTATGATTTATTAAAAGATCAAAGAAAGAGTCTTAGTAGTTTCCTGCATGTAATGGTATAGCTATAATATTTTTTCTGATCATTAAAAGCTCTCCATTAAGGATGAGTAATTAAAAGATCTAATCGGTCTTCATTAATAGGAAATGTAACGAACACATAAATATTATGACAATATGGGAGATATATGTTAGAATACATTAATCCAAGTTGAATTTGTGCATTTTTAATTGATCTTTCCAATGAATGTTGAATGAATTTGCAAAGTTAACAAAAAAAATTTGTTCGTGTGACAGGAATACTCCGTTTCATCGATTAAAAGAAGGAGTTCTTTTGGTGGCAAAAGGAGTCAGCATGAACTAGTAAGAATGTTAACTGGAATAGACAATTTTTTTTCTCCTTAATATATCCAAGTTATCTCATTTGTTTTGTTTTTTATCTCTTCTCCATAGGAATCTCCTTACTCTGAAGAAACAGAAGCACCAGTGCCGAAGTTGTTGAAGAAAGTGGAGAACGTAAAACCAGGAAAAGCAGGAGGCATTCCTAAGCATCATAGAAAGGTGAGTTACTTTTCTATAAAATGGCAAATGTTTTATGCCTTTTAATGGTTGTCTGAAATCATATTTAACAATTACCTTTGCTCCTATACTCAATGAGCAGGTAACTCGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACAATTACAAAGAAAAGGAAAACAAGAAGTACTGTCTTGTTCGAGGCATGTATCTGTTTCTCTCTAAATGCAATCAATCCTATAGATGCACACATGAATTACATTTCCACACCACATGGCTTGGCTTCCAAGTGCAGACTTCTTATTTGCCTGAAAATATTGAATTTTTCTGTTTATCAGGATCCAAGAAAACAAAAGATAAATACACCAAAAACAAATACCCCTAGAACTGTTGTTAAGGTAATCAACTCAGCTGAAACTCTCCTTTTTATTGGCATGTCATTTATAGATTGCTTTTAGCATTATTCCTTTAACAAATCAAGATGCACAACTCTAATGAATATGGATGAATTATTAGAAGATAATTTATTTTATCATCTCAAACAGAAATGTTTTCATTTTCATTACCACACTATGCTGGTGCTACTAAAAATGACGATGGTTAAGAACATATACGATCTTATTAGTTTAAAGATTTTGTTTATTTTAATCCAATTATTGTTTTTGAAGTTCAGTATTTTCCTTGTTGGTTATGTAATTTGTAAACTATTTTTATTTGGATATGCAAGACTCATAACATATTTTGAGAATCTGATGCTTTCAAATGTTGTTATGCCAATTAGCTTACCATTATATATATTGAGTTACTTCGTGTAATGCTACTGACATAGTATAATTAAAAGCAAACAGAAAAGAAAAGGTTTGTATGAATGTTATTTTCTCCTTTTTCCTATAAGACTTTAGGATAAACCAAATCAGATATAATACTAATCTTTGTACATACCTTGTATAAGGTGACAAATAAGTGCTTCTACATATGTTATGCTGTTCCTATTGTGCTGTAGTTATATTTTTTACATTTCATTGATGCAGAGTCAGAGGGTTGAAGACCATCCTCGTCCTTCAAATATCGGTGATTTGTTTTCAGAAGGGTCTCTAAATCCTTATGCAGATGATCCCTATGCATTTGATTAG

Protein sequence

>MS.gene043961.t1

MQKLGGFPTSKSLDRFKSLYGSTSGTAKPLSSSISARQSSDSVSSGSFANLKLTAEKLVKEQASVKTDLDIANTKLKKSLEHIRALEEKLQNAFNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQQLAGIVQDAEKDKEKLENKLSASSEALESLNEQMNGLSLKLDSTDETIKARDNELEKLKFAAEEREKFHSDEKCRAANVIEEKDTMIKNLEDMLTSSRLATENLNSKLGELHLQIKVKDEEITHHITSEQKLDKEKSDLQLCNADLAEKLGTSLQKINNLEGSLQEMAAQLLNLDKESLNLVNKFDEMNSLYTSCFNLVQHERDTFSKHAQNQYDVLHNKFLVLSSEKDEIHMTNQELRSSLNDLRKVQESTVAQYTEDCRLAAERIQRLESEAEALISKKAEAEVTISKLEEKAEILLGSVRSSENQMQGLLLKISALETESKENMERMQADILKKSEEIDTLQKERMKVEQDADSFDKEVLQLRNVLEEKEQCILQQKEQEKKLEDQITENRSLLTAAESKLAEARNQYDQMVENKQLELSKHLKEISQRNDQAINDIKRKYELEKMEIVKLEKDKADKAIAAIEGRCDQKLAECKEESRKQLMQIQEEHAKLVTHMQQEHDKRQLCLQAEHSEKLKRAQLQAENELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEERQKALLQLQWKVMSDKPKEDPEVNSKQEYSVSSIKRRSSFGGKRSQHELESPYSEETEAPVPKLLKKVENVKPGKAGGIPKHHRKVTRHEYEVETSNGRTITKKRKTRSTVLFEDPRKQKINTPKTNTPRTVVKSQRVEDHPRPSNIGDLFSEGSLNPYADDPYAFD