Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20859.t1 | KEH43196.1 | 97.6 | 808 | 19 | 0 | 1 | 808 | 4 | 811 | 0.00E+00 | 1541.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20859.t1 | Q9ZSM8 | 51.7 | 837 | 352 | 13 | 12 | 808 | 32 | 856 | 8.7e-225 | 781.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20859.t1 | A0A072VNH8 | 97.6 | 808 | 19 | 0 | 1 | 808 | 4 | 811 | 0.0e+00 | 1541.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20859.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20859 | 0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene20859 | 0.850274 | 1.89E-60 | -1.69E-46 |
| MS.gene049272 | MS.gene20859 | 0.816686 | 4.87E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene20859 | 0.805416 | 1.35E-49 | -1.69E-46 |
| MS.gene049585 | MS.gene20859 | 0.822746 | 2.01E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene20859 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene20859 | 0.871553 | 6.26E-67 | -1.69E-46 |
| MS.gene050561 | MS.gene20859 | 0.870246 | 1.69E-66 | -1.69E-46 |
| MS.gene050562 | MS.gene20859 | 0.86055 | 1.91E-63 | -1.69E-46 |
| MS.gene050844 | MS.gene20859 | 0.808219 | 3.45E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene20859 | 0.804536 | 2.06E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene20859 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene20859 | 0.862695 | 4.22E-64 | -1.69E-46 |
| MS.gene05132 | MS.gene20859 | 0.803441 | 3.48E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene20859 | 0.836531 | 8.86E-57 | -1.69E-46 |
| MS.gene051594 | MS.gene20859 | 0.816382 | 5.69E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene20859 | 0.85313 | 2.93E-61 | -1.69E-46 |
| MS.gene051800 | MS.gene20859 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene05191 | MS.gene20859 | 0.806142 | 9.49E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene20859 | 0.835386 | 1.73E-56 | -1.69E-46 |
| MS.gene052208 | MS.gene20859 | 0.824403 | 8.23E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene20859 | -0.837496 | 5.02E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene20859 | 0.822249 | 2.62E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene20859 | 0.814879 | 1.23E-51 | -1.69E-46 |
| MS.gene052534 | MS.gene20859 | 0.811287 | 7.55E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene20859 | 0.83267 | 8.28E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene20859 | 0.815908 | 7.26E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene20859 | 0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene20859 | 0.808681 | 2.75E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene20859 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene20859 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene20859 | 0.802569 | 5.27E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene20859 | 0.821677 | 3.55E-53 | -1.69E-46 |
| MS.gene05350 | MS.gene20859 | 0.811628 | 6.37E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene20859 | 0.833776 | 4.39E-56 | -1.69E-46 |
| MS.gene05414 | MS.gene20859 | 0.805709 | 1.17E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene20859 | 0.832133 | 1.12E-55 | -1.69E-46 |
| MS.gene054576 | MS.gene20859 | 0.802789 | 4.75E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene20859 | 0.851171 | 1.06E-60 | -1.69E-46 |
| MS.gene055227 | MS.gene20859 | 0.828031 | 1.13E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene20859 | 0.811819 | 5.79E-51 | -1.69E-46 |
| MS.gene055464 | MS.gene20859 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene20859 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene20859 | 0.826954 | 2.04E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene20859 | 0.809923 | 1.49E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene20859 | 0.845211 | 4.68E-59 | -1.69E-46 |
| MS.gene055926 | MS.gene20859 | 0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene20859 | 0.816083 | 6.64E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene20859 | 0.828857 | 7.12E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene20859 | 0.819065 | 1.41E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene20859 | 0.842344 | 2.74E-58 | -1.69E-46 |
| MS.gene056252 | MS.gene20859 | 0.815335 | 9.74E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene20859 | 0.803882 | 2.82E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene20859 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene20859 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene20859 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene20859 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene20859 | 0.865069 | 7.71E-65 | -1.69E-46 |
| MS.gene057026 | MS.gene20859 | 0.820102 | 8.19E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene20859 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene20859 | 0.839231 | 1.79E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene20859 | 0.817393 | 3.37E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene20859 | 0.842169 | 3.05E-58 | -1.69E-46 |
| MS.gene057601 | MS.gene20859 | 0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene20859 | 0.836686 | 8.09E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene20859 | 0.824825 | 6.54E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene20859 | 0.832253 | 1.05E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene20859 | 0.859985 | 2.83E-63 | -1.69E-46 |
| MS.gene058037 | MS.gene20859 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene058294 | MS.gene20859 | 0.803425 | 3.51E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene20859 | 0.836103 | 1.14E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene20859 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene20859 | 0.838645 | 2.54E-57 | -1.69E-46 |
| MS.gene058919 | MS.gene20859 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene20859 | 0.861188 | 1.22E-63 | -1.69E-46 |
| MS.gene05897 | MS.gene20859 | 0.820473 | 6.73E-53 | -1.69E-46 |
| MS.gene059015 | MS.gene20859 | 0.81434 | 1.62E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene20859 | 0.817408 | 3.35E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene20859 | 0.819011 | 1.45E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene20859 | 0.840724 | 7.32E-58 | -1.69E-46 |
| MS.gene059440 | MS.gene20859 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene20859 | 0.819803 | 9.59E-53 | -1.69E-46 |
| MS.gene059584 | MS.gene20859 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene20859 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene20859 | 0.829903 | 3.97E-55 | -1.69E-46 |
| MS.gene060312 | MS.gene20859 | 0.816119 | 6.52E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene20859 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene20859 | 0.800512 | 1.39E-48 | -1.69E-46 |
| MS.gene060373 | MS.gene20859 | 0.811508 | 6.76E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene20859 | 0.803773 | 2.97E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene20859 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene060918 | MS.gene20859 | 0.811569 | 6.56E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene20859 | 0.811841 | 5.72E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene20859 | 0.802711 | 4.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043961 | MS.gene20859 | PPI |
| MS.gene20859 | MS.gene010130 | PPI |
| MS.gene20859 | MS.gene010214 | PPI |
| MS.gene066336 | MS.gene20859 | PPI |
| MS.gene20859 | MS.gene035889 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20859.t1 | MTR_1g086980 | 98.639 | 808 | 11 | 0 | 1 | 808 | 24 | 831 | 0.0 | 1665 |
| MS.gene20859.t1 | MTR_1g086980 | 98.639 | 808 | 11 | 0 | 1 | 808 | 4 | 811 | 0.0 | 1663 |
| MS.gene20859.t1 | MTR_1g086980 | 98.639 | 808 | 11 | 0 | 1 | 808 | 14 | 821 | 0.0 | 1663 |
| MS.gene20859.t1 | MTR_1g086980 | 98.588 | 779 | 11 | 0 | 30 | 808 | 2 | 780 | 0.0 | 1606 |
| MS.gene20859.t1 | MTR_1g086980 | 98.814 | 759 | 9 | 0 | 50 | 808 | 1 | 759 | 0.0 | 1567 |
| MS.gene20859.t1 | MTR_1g086980 | 98.525 | 746 | 11 | 0 | 1 | 746 | 14 | 759 | 0.0 | 1529 |
| MS.gene20859.t1 | MTR_1g086980 | 98.088 | 680 | 13 | 0 | 1 | 680 | 14 | 693 | 0.0 | 1385 |
| MS.gene20859.t1 | MTR_1g086980 | 98.574 | 631 | 9 | 0 | 178 | 808 | 1 | 631 | 0.0 | 1303 |
| MS.gene20859.t1 | MTR_1g086980 | 98.257 | 631 | 11 | 0 | 50 | 680 | 1 | 631 | 0.0 | 1289 |
| MS.gene20859.t1 | MTR_1g086980 | 98.415 | 631 | 10 | 0 | 1 | 631 | 14 | 644 | 0.0 | 1287 |
| MS.gene20859.t1 | MTR_5g016870 | 47.275 | 844 | 366 | 15 | 16 | 804 | 42 | 861 | 0.0 | 687 |
| MS.gene20859.t1 | MTR_7g055660 | 56.533 | 398 | 157 | 7 | 415 | 806 | 345 | 732 | 5.31e-145 | 444 |
| MS.gene20859.t1 | MTR_7g055660 | 42.515 | 334 | 184 | 4 | 3 | 335 | 20 | 346 | 8.01e-81 | 275 |
| MS.gene20859.t1 | MTR_7g109560 | 56.595 | 417 | 162 | 7 | 400 | 805 | 353 | 761 | 8.39e-138 | 426 |
| MS.gene20859.t1 | MTR_7g109560 | 47.782 | 293 | 138 | 4 | 11 | 301 | 74 | 353 | 2.68e-78 | 268 |
| MS.gene20859.t1 | MTR_2g036060 | 39.516 | 124 | 73 | 1 | 654 | 775 | 1052 | 1175 | 3.32e-22 | 103 |
| MS.gene20859.t1 | MTR_2g036060 | 39.516 | 124 | 73 | 1 | 654 | 775 | 1027 | 1150 | 3.40e-22 | 103 |
| MS.gene20859.t1 | MTR_1g008230 | 36.800 | 125 | 77 | 2 | 657 | 779 | 612 | 736 | 8.57e-21 | 98.2 |
| MS.gene20859.t1 | MTR_1g008230 | 36.800 | 125 | 77 | 2 | 657 | 779 | 890 | 1014 | 1.75e-20 | 97.8 |
| MS.gene20859.t1 | MTR_8g027725 | 37.705 | 122 | 74 | 2 | 660 | 779 | 793 | 914 | 2.73e-20 | 97.1 |
| MS.gene20859.t1 | MTR_8g027725 | 37.705 | 122 | 74 | 2 | 660 | 779 | 808 | 929 | 2.88e-20 | 97.1 |
| MS.gene20859.t1 | MTR_3g091310 | 37.705 | 122 | 74 | 2 | 660 | 779 | 828 | 949 | 8.71e-20 | 95.5 |
| MS.gene20859.t1 | MTR_3g091310 | 37.705 | 122 | 74 | 2 | 660 | 779 | 922 | 1043 | 8.78e-20 | 95.5 |
| MS.gene20859.t1 | MTR_7g117355 | 36.170 | 141 | 76 | 3 | 660 | 798 | 823 | 951 | 1.88e-19 | 94.4 |
| MS.gene20859.t1 | MTR_7g021365 | 40.336 | 119 | 68 | 2 | 658 | 773 | 904 | 1022 | 5.71e-19 | 92.8 |
| MS.gene20859.t1 | MTR_8g064240 | 52.000 | 75 | 34 | 1 | 722 | 794 | 1 | 75 | 1.42e-18 | 81.6 |
| MS.gene20859.t1 | MTR_1g098370 | 36.641 | 131 | 81 | 1 | 647 | 775 | 86 | 216 | 1.56e-18 | 90.1 |
| MS.gene20859.t1 | MTR_1g098000 | 36.641 | 131 | 81 | 1 | 647 | 775 | 83 | 213 | 3.75e-18 | 89.0 |
| MS.gene20859.t1 | MTR_1g012890 | 32.800 | 125 | 78 | 1 | 655 | 773 | 219 | 343 | 2.40e-16 | 82.0 |
| MS.gene20859.t1 | MTR_0071s0100 | 31.405 | 121 | 81 | 1 | 655 | 773 | 206 | 326 | 2.56e-16 | 82.4 |
| MS.gene20859.t1 | MTR_1g012910 | 34.783 | 115 | 69 | 1 | 665 | 773 | 532 | 646 | 1.12e-15 | 81.6 |
| MS.gene20859.t1 | MTR_1g012910 | 34.783 | 115 | 69 | 1 | 665 | 773 | 369 | 483 | 1.22e-15 | 81.3 |
| MS.gene20859.t1 | MTR_8g064250 | 57.143 | 63 | 24 | 2 | 746 | 805 | 7 | 69 | 5.04e-15 | 72.0 |
| MS.gene20859.t1 | MTR_8g064320 | 57.143 | 63 | 24 | 2 | 746 | 805 | 9 | 71 | 8.90e-15 | 71.6 |
| MS.gene20859.t1 | MTR_6g059310 | 32.847 | 137 | 87 | 3 | 648 | 779 | 101 | 237 | 4.15e-14 | 75.1 |
| MS.gene20859.t1 | MTR_6g059310 | 32.847 | 137 | 87 | 3 | 648 | 779 | 101 | 237 | 4.24e-14 | 75.1 |
| MS.gene20859.t1 | MTR_3g088625 | 27.692 | 195 | 103 | 4 | 583 | 775 | 1178 | 1336 | 1.10e-12 | 72.8 |
| MS.gene20859.t1 | MTR_3g088625 | 27.692 | 195 | 103 | 4 | 583 | 775 | 1284 | 1442 | 1.17e-12 | 72.8 |
| MS.gene20859.t1 | MTR_5g018850 | 29.655 | 145 | 85 | 2 | 648 | 775 | 1341 | 1485 | 2.01e-12 | 71.6 |
| MS.gene20859.t1 | MTR_8g064310 | 55.769 | 52 | 21 | 1 | 745 | 794 | 6 | 57 | 2.34e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20859.t1 | AT4G02020 | 56.057 | 842 | 304 | 14 | 14 | 808 | 34 | 856 | 0.0 | 869 |
| MS.gene20859.t1 | AT4G02020 | 54.161 | 781 | 292 | 14 | 14 | 747 | 34 | 795 | 0.0 | 766 |
| MS.gene20859.t1 | AT4G02020 | 52.848 | 755 | 290 | 14 | 14 | 721 | 34 | 769 | 0.0 | 716 |
| MS.gene20859.t1 | AT4G02020 | 52.848 | 755 | 290 | 14 | 14 | 721 | 34 | 769 | 0.0 | 716 |
| MS.gene20859.t1 | AT2G23380 | 62.143 | 420 | 141 | 10 | 395 | 804 | 262 | 673 | 5.34e-166 | 496 |
| MS.gene20859.t1 | AT2G23380 | 60.000 | 65 | 26 | 0 | 234 | 298 | 30 | 94 | 3.27e-18 | 90.1 |
| MS.gene20859.t1 | AT2G23380 | 62.143 | 420 | 141 | 10 | 395 | 804 | 489 | 900 | 2.77e-164 | 499 |
| MS.gene20859.t1 | AT2G23380 | 39.748 | 317 | 160 | 6 | 3 | 298 | 15 | 321 | 1.49e-53 | 201 |
| MS.gene20859.t1 | AT1G02580 | 47.583 | 393 | 173 | 6 | 411 | 798 | 323 | 687 | 5.87e-119 | 375 |
| MS.gene20859.t1 | AT1G02580 | 30.000 | 330 | 188 | 10 | 1 | 301 | 1 | 316 | 2.30e-24 | 109 |
| MS.gene20859.t1 | AT1G02580 | 43.382 | 272 | 125 | 5 | 411 | 680 | 323 | 567 | 7.75e-66 | 230 |
| MS.gene20859.t1 | AT1G02580 | 30.000 | 330 | 188 | 10 | 1 | 301 | 1 | 316 | 2.64e-24 | 108 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT5G42400 | 38.583 | 127 | 76 | 1 | 651 | 775 | 1241 | 1367 | 1.51e-22 | 104 |
| MS.gene20859.t1 | AT2G31650 | 42.857 | 119 | 65 | 2 | 658 | 773 | 897 | 1015 | 5.65e-21 | 99.4 |
| MS.gene20859.t1 | AT4G27910 | 37.302 | 126 | 77 | 2 | 657 | 780 | 883 | 1008 | 1.10e-20 | 98.6 |
| MS.gene20859.t1 | AT4G30860 | 34.337 | 166 | 94 | 5 | 613 | 773 | 287 | 442 | 1.57e-20 | 96.3 |
| MS.gene20859.t1 | AT5G53430 | 36.800 | 125 | 77 | 2 | 657 | 779 | 899 | 1023 | 1.63e-19 | 94.7 |
| MS.gene20859.t1 | AT1G05830 | 41.176 | 119 | 67 | 2 | 658 | 773 | 918 | 1036 | 7.40e-19 | 92.4 |
| MS.gene20859.t1 | AT1G05830 | 41.176 | 119 | 67 | 2 | 658 | 773 | 918 | 1036 | 7.40e-19 | 92.4 |
| MS.gene20859.t1 | AT1G05830 | 41.176 | 119 | 67 | 2 | 658 | 773 | 918 | 1036 | 7.40e-19 | 92.4 |
| MS.gene20859.t1 | AT1G05830 | 41.176 | 119 | 67 | 2 | 658 | 773 | 918 | 1036 | 7.40e-19 | 92.4 |
| MS.gene20859.t1 | AT1G76710 | 36.154 | 130 | 81 | 1 | 648 | 775 | 78 | 207 | 2.84e-18 | 89.4 |
| MS.gene20859.t1 | AT1G76710 | 36.154 | 130 | 81 | 1 | 648 | 775 | 78 | 207 | 3.05e-18 | 89.4 |
| MS.gene20859.t1 | AT1G76710 | 36.154 | 130 | 81 | 1 | 648 | 775 | 78 | 207 | 3.05e-18 | 89.4 |
| MS.gene20859.t1 | AT1G76710 | 36.154 | 130 | 81 | 1 | 648 | 775 | 78 | 207 | 3.09e-18 | 89.4 |
| MS.gene20859.t1 | AT3G61740 | 34.677 | 124 | 78 | 2 | 660 | 780 | 840 | 963 | 1.15e-17 | 88.6 |
| MS.gene20859.t1 | AT3G61740 | 34.677 | 124 | 78 | 2 | 660 | 780 | 876 | 999 | 1.28e-17 | 88.6 |
| MS.gene20859.t1 | AT3G59960 | 32.558 | 129 | 82 | 3 | 656 | 779 | 108 | 236 | 1.54e-15 | 78.6 |
| MS.gene20859.t1 | AT3G59960 | 32.558 | 129 | 82 | 3 | 656 | 779 | 108 | 236 | 1.54e-15 | 78.6 |
| MS.gene20859.t1 | AT3G59960 | 32.558 | 129 | 82 | 3 | 656 | 779 | 108 | 236 | 1.54e-15 | 78.6 |
| MS.gene20859.t1 | AT3G59960 | 32.558 | 129 | 82 | 3 | 656 | 779 | 108 | 236 | 2.32e-15 | 78.6 |
| MS.gene20859.t1 | AT2G44150 | 32.558 | 129 | 82 | 3 | 656 | 779 | 113 | 241 | 1.12e-13 | 73.9 |
| MS.gene20859.t1 | AT1G77300 | 31.285 | 179 | 108 | 5 | 599 | 775 | 979 | 1144 | 8.45e-13 | 73.2 |
| MS.gene20859.t1 | AT1G77300 | 33.846 | 130 | 84 | 2 | 648 | 775 | 1015 | 1144 | 1.12e-12 | 72.8 |
Find 185 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGACAAACTTACCTTAA+TGG | 0.162835 | 1.3:-61553962 | None:intergenic |
| TTGGGGAAGTCTGATGTTTC+TGG | 0.176477 | 1.3:+61561014 | MS.gene20859:CDS |
| AAGGATTGTTCTTGTCTTAA+TGG | 0.220999 | 1.3:+61558527 | MS.gene20859:CDS |
| GTCTCATTTGTGACAGCTTT+TGG | 0.239771 | 1.3:-61556581 | None:intergenic |
| CAAGGAAGTTTAAATATTCT+TGG | 0.253650 | 1.3:+61558405 | MS.gene20859:CDS |
| CGTCCTTTATGTAAATTCTA+TGG | 0.261939 | 1.3:+61554388 | MS.gene20859:CDS |
| TATGACATTGCAGCTTCTTC+TGG | 0.297074 | 1.3:-61554276 | None:intergenic |
| TGGATGGGGAGCCTTCTTAA+AGG | 0.301212 | 1.3:+61561034 | MS.gene20859:CDS |
| GAACGAGTTGATGGAATTCT+TGG | 0.315350 | 1.3:+61556635 | MS.gene20859:CDS |
| ATAGCTAGGAACTTACTTTC+TGG | 0.330151 | 1.3:+61557329 | MS.gene20859:CDS |
| TTGCCCTGGTTTCTGTCTCC+TGG | 0.332763 | 1.3:-61554424 | None:intergenic |
| GATTACCTGGATTTCTAAAC+TGG | 0.334427 | 1.3:-61555255 | None:intergenic |
| CGAGAGAATTCAATCCATTA+AGG | 0.335586 | 1.3:+61553948 | MS.gene20859:CDS |
| TTACAAGAATCCTGAGAATC+AGG | 0.335745 | 1.3:-61556488 | None:intergenic |
| TTCACCTTTGCATAGCAGTT+GGG | 0.335759 | 1.3:-61561545 | None:intergenic |
| CTGCTGGTCACCCAACAATA+TGG | 0.336522 | 1.3:+61558432 | MS.gene20859:CDS |
| TTCAATTCTTTCCTCAAGAA+TGG | 0.355699 | 1.3:+61554363 | MS.gene20859:CDS |
| AGTATCAGAGAAAGTAATAT+TGG | 0.369713 | 1.3:+61555428 | MS.gene20859:CDS |
| CACAGGTCTATTATTTCAGC+TGG | 0.378581 | 1.3:+61557410 | MS.gene20859:CDS |
| GAATTCTTGGTTTCTCAGAT+TGG | 0.379032 | 1.3:+61556648 | MS.gene20859:CDS |
| AAGCTGCAATGTCATACTTC+AGG | 0.381738 | 1.3:+61554283 | MS.gene20859:CDS |
| CTCAGCAACCTCGGTCTAGA+TGG | 0.384033 | 1.3:-61558368 | None:intergenic |
| TTGCAACTGATTTATCTTGT+TGG | 0.384750 | 1.3:-61553911 | None:intergenic |
| GCCCATGGAGGTGCTTGATC+TGG | 0.396645 | 1.3:-61562085 | None:intergenic |
| CTCTTCTATGATTATTGCTA+TGG | 0.397112 | 1.3:+61562061 | MS.gene20859:CDS |
| GGTTTCTGTCTCCTGGACCC+TGG | 0.403366 | 1.3:-61554417 | None:intergenic |
| CTATAGGTAATGTTGGTTGC+TGG | 0.407659 | 1.3:+61561986 | MS.gene20859:intron |
| AATTGCTGATTCGTCTCTCT+TGG | 0.412706 | 1.3:-61562125 | None:intergenic |
| TGGAAATGTTTGGCAGAAAC+AGG | 0.418632 | 1.3:+61556705 | MS.gene20859:CDS |
| AAGGTTCCCACATCATCATT+TGG | 0.421371 | 1.3:-61553886 | None:intergenic |
| ACTCAGAAAACTTGAGTAAA+CGG | 0.424610 | 1.3:+61556417 | MS.gene20859:CDS |
| TAATAGCAAGAGCTTACATT+TGG | 0.424724 | 1.3:+61556553 | MS.gene20859:CDS |
| TTGAAGGGAGTGGAAATGTT+TGG | 0.426717 | 1.3:+61556695 | MS.gene20859:CDS |
| CAACAGTTTCGACAGACATC+TGG | 0.427301 | 1.3:-61559124 | None:intergenic |
| TATTTCAGCTGGTTCAATCA+TGG | 0.427476 | 1.3:+61557421 | MS.gene20859:CDS |
| GAGTATACTGCATGCAAGAT+TGG | 0.429208 | 1.3:-61558478 | None:intergenic |
| AATTTCTAGTATGGCATTTG+AGG | 0.432378 | 1.3:+61555178 | MS.gene20859:intron |
| CTCCGTCTGTGAAGAGTCCC+TGG | 0.432892 | 1.3:-61554326 | None:intergenic |
| AGAGTGAAAAGAAGACAGTT+TGG | 0.433099 | 1.3:+61555780 | MS.gene20859:intron |
| GTTTCTGTCTCCTGGACCCT+GGG | 0.433547 | 1.3:-61554416 | None:intergenic |
| TGGTGATCAGTGCTACCTTC+AGG | 0.436446 | 1.3:+61555832 | MS.gene20859:CDS |
| ATGTTGTTAGCAAGTATGTT+GGG | 0.438742 | 1.3:+61555228 | MS.gene20859:CDS |
| CAGCTGTGGGGATGGTACAC+TGG | 0.439264 | 1.3:+61560806 | MS.gene20859:intron |
| TCAATGGAAGAACGAGTTGA+TGG | 0.443369 | 1.3:+61556626 | MS.gene20859:CDS |
| TTCTCTAGATACATGCTCAT+AGG | 0.445332 | 1.3:-61555494 | None:intergenic |
| CTTAATGGATTGAATTCTCT+CGG | 0.445675 | 1.3:-61553947 | None:intergenic |
| AAGATCGCTTCCTGATTCTC+AGG | 0.449551 | 1.3:+61556478 | MS.gene20859:CDS |
| CACAATGGCAACCTCTGAAC+CGG | 0.454848 | 1.3:-61559042 | None:intergenic |
| ATTCACCTTTGCATAGCAGT+TGG | 0.455961 | 1.3:-61561546 | None:intergenic |
| GTTCGAAGAGCTGCAAGAAC+CGG | 0.461634 | 1.3:+61559023 | MS.gene20859:CDS |
| ACTGCCAGGTTCTTCTGCAC+TGG | 0.463190 | 1.3:-61556333 | None:intergenic |
| TCGTCTCTCTTGGAACCCTC+AGG | 0.464748 | 1.3:-61562115 | None:intergenic |
| AGAGAAAGAGTTATACTTGA+AGG | 0.465034 | 1.3:+61556679 | MS.gene20859:CDS |
| TACTAACTTACCACAAAATA+CGG | 0.467763 | 1.3:-61554844 | None:intergenic |
| ATTAATCATAACCTTTAAGA+AGG | 0.469624 | 1.3:-61561045 | None:intergenic |
| TGGATTGAATTCTCTCGGCC+TGG | 0.469701 | 1.3:-61553942 | None:intergenic |
| AAACCATAGAATTTACATAA+AGG | 0.469948 | 1.3:-61554391 | None:intergenic |
| ACCGGCATCAATGTGTTCCT+TGG | 0.472051 | 1.3:-61562032 | None:intergenic |
| AAATATTCTTGGAAGTCTGC+TGG | 0.473416 | 1.3:+61558416 | MS.gene20859:CDS |
| ATTGGCCATGGCTCATCAAT+GGG | 0.475159 | 1.3:-61562176 | None:intergenic |
| GAAGTCTGATGTTTCTGGAT+GGG | 0.479401 | 1.3:+61561019 | MS.gene20859:CDS |
| GAGCCACATCGGCGTGGAGA+AGG | 0.489074 | 1.3:+61560831 | MS.gene20859:CDS |
| GATTACCACCATATACATCT+TGG | 0.489282 | 1.3:+61554494 | MS.gene20859:CDS |
| TCGACTTCTACATTGACTCT+TGG | 0.492456 | 1.3:-61559065 | None:intergenic |
| TCTGTCGAAACTGTTGGGTT+AGG | 0.492462 | 1.3:+61559131 | MS.gene20859:CDS |
| GTTCTTGATGCTTATCGTAA+AGG | 0.493028 | 1.3:+61561488 | MS.gene20859:CDS |
| AAGTCTGATGTTTCTGGATG+GGG | 0.494803 | 1.3:+61561020 | MS.gene20859:CDS |
| GCTGACGATCAATCAGTTGT+TGG | 0.496379 | 1.3:+61554707 | MS.gene20859:CDS |
| GGGCACCAGTTTAGAAATCC+AGG | 0.497692 | 1.3:+61555250 | MS.gene20859:CDS |
| TCACCTTTGCATAGCAGTTG+GGG | 0.500009 | 1.3:-61561544 | None:intergenic |
| AGAAAGTAATATTGGTAGGT+TGG | 0.500552 | 1.3:+61555436 | MS.gene20859:CDS |
| AATGTTGTTAGCAAGTATGT+TGG | 0.504453 | 1.3:+61555227 | MS.gene20859:CDS |
| AGATGTCTGTCGAAACTGTT+GGG | 0.506928 | 1.3:+61559126 | MS.gene20859:CDS |
| AGCAGTTGGGGTTTGATGAG+TGG | 0.507871 | 1.3:-61561532 | None:intergenic |
| CCATGGCTCATCAATGGGAT+TGG | 0.508976 | 1.3:-61562171 | None:intergenic |
| GACGACAGAAAAGGTTATCA+AGG | 0.510059 | 1.3:-61555541 | None:intergenic |
| AGAGTTATACTTGAAGGGAG+TGG | 0.511021 | 1.3:+61556685 | MS.gene20859:CDS |
| GACCAGCATCCTAAAAGCTC+AGG | 0.512493 | 1.3:+61555458 | MS.gene20859:CDS |
| AGCAAGAGCTTACATTTGGA+TGG | 0.514477 | 1.3:+61556557 | MS.gene20859:CDS |
| GTCCAGATCAAGCACCTCCA+TGG | 0.515220 | 1.3:+61562083 | MS.gene20859:CDS |
| TTCCTTACGGGATATATCAA+AGG | 0.515656 | 1.3:-61555688 | None:intergenic |
| CCAGGCACCGACGACAGAAA+AGG | 0.520888 | 1.3:-61555550 | None:intergenic |
| CCTGCTCATTCAAATCGAAA+AGG | 0.520942 | 1.3:-61561238 | None:intergenic |
| TTTCTTATCCCGAAAAGACC+CGG | 0.523094 | 1.3:-61556270 | None:intergenic |
| GGAAGTCTGATGTTTCTGGA+TGG | 0.525818 | 1.3:+61561018 | MS.gene20859:CDS |
| TGTTTCTTTGCTCTACCTTG+TGG | 0.528560 | 1.3:-61562148 | None:intergenic |
| GATTGTTCTTGTCTTAATGG+TGG | 0.531062 | 1.3:+61558530 | MS.gene20859:CDS |
| CTGATTTATCTTGTTGGACA+AGG | 0.531637 | 1.3:-61553905 | None:intergenic |
| AGCTGAAATAATAGACCTGT+GGG | 0.532398 | 1.3:-61557408 | None:intergenic |
| AAGCATCAAGATTCCACGTA+TGG | 0.533307 | 1.3:+61554468 | MS.gene20859:CDS |
| CCATGACAATCAATTCTTGT+CGG | 0.533836 | 1.3:-61556371 | None:intergenic |
| TCGGTCTAGATGGCATGTCT+TGG | 0.533864 | 1.3:-61558358 | None:intergenic |
| TCTGCAGTTGCCTCATAGCT+AGG | 0.536215 | 1.3:+61557315 | MS.gene20859:intron |
| CCATCCAGTGCAGAAGAACC+TGG | 0.536754 | 1.3:+61556329 | MS.gene20859:CDS |
| AAGTATAACTCTTTCTCTAG+AGG | 0.540229 | 1.3:-61556674 | None:intergenic |
| TGAGGAACACGGGTTAAATG+AGG | 0.542454 | 1.3:+61555196 | MS.gene20859:CDS |
| TTCTGGTTCGAAGACTTGCA+TGG | 0.543056 | 1.3:+61557346 | MS.gene20859:CDS |
| CCAGGTTCTTCTGCACTGGA+TGG | 0.543278 | 1.3:-61556329 | None:intergenic |
| GAGAAAGAGTTATACTTGAA+GGG | 0.544561 | 1.3:+61556680 | MS.gene20859:CDS |
| TCACGCCCAGCAGCAAAACA+TGG | 0.547646 | 1.3:-61559094 | None:intergenic |
| AGTGTAGTACTCTGACTGCC+AGG | 0.547776 | 1.3:-61556347 | None:intergenic |
| CCCTCAGGTTTACGAGCCCA+TGG | 0.549721 | 1.3:-61562100 | None:intergenic |
| TCAGAGAAAGTAATATTGGT+AGG | 0.550783 | 1.3:+61555432 | MS.gene20859:CDS |
| TACATTGACTCTTGGCACAA+TGG | 0.551079 | 1.3:-61559057 | None:intergenic |
| GTTCACCCGTGTACTCTCCT+AGG | 0.552754 | 1.3:-61561154 | None:intergenic |
| CAGATGTCTGTCGAAACTGT+TGG | 0.555785 | 1.3:+61559125 | MS.gene20859:CDS |
| AGCTGTGGGGATGGTACACT+GGG | 0.558478 | 1.3:+61560807 | MS.gene20859:intron |
| ATGACATGTCTTGATTGCCC+TGG | 0.559314 | 1.3:-61554438 | None:intergenic |
| ATCATAGAAGAGCTCCTCAC+CGG | 0.561900 | 1.3:-61562050 | None:intergenic |
| TTCTTATCCCGAAAAGACCC+GGG | 0.566631 | 1.3:-61556269 | None:intergenic |
| GGGTCCAGGAGACAGAAACC+AGG | 0.568933 | 1.3:+61554420 | MS.gene20859:CDS |
| GCCAAGGAACACATTGATGC+CGG | 0.569010 | 1.3:+61562031 | MS.gene20859:CDS |
| ACTGCTGCTATAGGTAATGT+TGG | 0.569757 | 1.3:+61561979 | MS.gene20859:intron |
| TCAGTTGCAAAAGCAAATCC+AGG | 0.571291 | 1.3:+61553924 | MS.gene20859:CDS |
| ACGCATCAGGAATCAGAGAA+TGG | 0.572672 | 1.3:+61554685 | MS.gene20859:intron |
| CCGACAAGAATTGATTGTCA+TGG | 0.573856 | 1.3:+61556371 | MS.gene20859:CDS |
| TAATGTCAGCAGTATCAACC+AGG | 0.580659 | 1.3:+61554308 | MS.gene20859:CDS |
| AAAGTAAGTTCCTAGCTATG+AGG | 0.582475 | 1.3:-61557325 | None:intergenic |
| AGAGCCGCCAAATGATGATG+TGG | 0.582841 | 1.3:+61553879 | MS.gene20859:CDS |
| AGCTGCAAGAACCGGTTCAG+AGG | 0.582865 | 1.3:+61559031 | MS.gene20859:CDS |
| GTTGCTGGAGATCATCGAGT+TGG | 0.583554 | 1.3:+61562001 | MS.gene20859:CDS |
| CACATTGATTGACACCCACA+TGG | 0.585645 | 1.3:-61558500 | None:intergenic |
| TAAAGGACGGTCCATTCTTG+AGG | 0.587453 | 1.3:-61554374 | None:intergenic |
| ACAATTGTAGAGGAGACAGA+TGG | 0.588503 | 1.3:+61556296 | MS.gene20859:CDS |
| TCCAGATCAAGCACCTCCAT+GGG | 0.593087 | 1.3:+61562084 | MS.gene20859:CDS |
| CACAGAGAAGCTGATAAGCG+TGG | 0.596923 | 1.3:+61561185 | MS.gene20859:CDS |
| TGAGTCACATTGTGCCGTGT+CGG | 0.596974 | 1.3:-61556456 | None:intergenic |
| TCTTTGTACAGCTGTGGGGA+TGG | 0.597302 | 1.3:+61560798 | MS.gene20859:intron |
| AATCAGTTGTTGGAAGAAGA+CGG | 0.597314 | 1.3:+61554717 | MS.gene20859:CDS |
| TAAGAAAACTACAATTGTAG+AGG | 0.600144 | 1.3:+61556286 | MS.gene20859:CDS |
| TGACCTTCTCCACGCCGATG+TGG | 0.602963 | 1.3:-61560834 | None:intergenic |
| CACGCCCAGCAGCAAAACAT+GGG | 0.606423 | 1.3:-61559093 | None:intergenic |
| ATATCTAGTTATATGCATGA+TGG | 0.607787 | 1.3:+61557371 | MS.gene20859:CDS |
| AACCAGGGACTCTTCACAGA+CGG | 0.608975 | 1.3:+61554324 | MS.gene20859:CDS |
| GTTCCCACATCATCATTTGG+CGG | 0.610279 | 1.3:-61553883 | None:intergenic |
| AAAATTTGACACAGAGTGCA+CGG | 0.611174 | 1.3:+61557454 | MS.gene20859:CDS |
| TTTCAAAAGATTCAACTCCC+GGG | 0.612464 | 1.3:+61556252 | MS.gene20859:CDS |
| GGAACACGGGTTAAATGAGG+AGG | 0.618859 | 1.3:+61555199 | MS.gene20859:CDS |
| ATATGGAAAAGAATTGCTGA+TGG | 0.619252 | 1.3:+61558449 | MS.gene20859:CDS |
| GAGGCATGTCAATTCCCCAC+AGG | 0.619873 | 1.3:+61557393 | MS.gene20859:CDS |
| CAGCTGAAATAATAGACCTG+TGG | 0.621680 | 1.3:-61557409 | None:intergenic |
| AGTATGGCATTTGAGGAACA+CGG | 0.622172 | 1.3:+61555185 | MS.gene20859:intron |
| ACAGAGAAGCTGATAAGCGT+GGG | 0.622981 | 1.3:+61561186 | MS.gene20859:CDS |
| TCCATGGGCTCGTAAACCTG+AGG | 0.626427 | 1.3:+61562099 | MS.gene20859:CDS |
| AATATCCAAGATGTATATGG+TGG | 0.626743 | 1.3:-61554499 | None:intergenic |
| AAACCCCAACTGCTATGCAA+AGG | 0.629398 | 1.3:+61561541 | MS.gene20859:CDS |
| CCATGGGCTCGTAAACCTGA+GGG | 0.632587 | 1.3:+61562100 | MS.gene20859:CDS |
| TCGAGTTGGCATATTCGCCA+AGG | 0.633128 | 1.3:+61562015 | MS.gene20859:CDS |
| CATAGAATTTACATAAAGGA+CGG | 0.634365 | 1.3:-61554387 | None:intergenic |
| GAGCCGCCAAATGATGATGT+GGG | 0.634443 | 1.3:+61553880 | MS.gene20859:CDS |
| GGGAATCTAATGCATCACTC+AGG | 0.636717 | 1.3:-61555520 | None:intergenic |
| GGTTCAATCATGGACGACAA+AGG | 0.638496 | 1.3:+61557431 | MS.gene20859:CDS |
| TTATGATCAACGTGGAAGTG+AGG | 0.638890 | 1.3:+61554745 | MS.gene20859:CDS |
| CAATTGTAGAGGAGACAGAT+GGG | 0.639184 | 1.3:+61556297 | MS.gene20859:CDS |
| ACAGTTTGGTCTGAGCCTGT+AGG | 0.639905 | 1.3:+61555794 | MS.gene20859:CDS |
| GGTGGTAATCTTTCCATACG+TGG | 0.640705 | 1.3:-61554481 | None:intergenic |
| TGATTACCTAGGAGAGTACA+CGG | 0.641342 | 1.3:+61561148 | MS.gene20859:CDS |
| ACGACAGAAAAGGTTATCAA+GGG | 0.642705 | 1.3:-61555540 | None:intergenic |
| TCTAGTTATATGCATGATGG+AGG | 0.645067 | 1.3:+61557374 | MS.gene20859:CDS |
| GTATGGCATTTGAGGAACAC+GGG | 0.649134 | 1.3:+61555186 | MS.gene20859:intron |
| TGTTGTTAGCAAGTATGTTG+GGG | 0.651009 | 1.3:+61555229 | MS.gene20859:CDS |
| GGAACACATTGATGCCGGTG+AGG | 0.653810 | 1.3:+61562036 | MS.gene20859:CDS |
| CTGGGAGAGCCACATCGGCG+TGG | 0.657062 | 1.3:+61560825 | MS.gene20859:CDS |
| GCATGCAGTATACTCCATGT+GGG | 0.660903 | 1.3:+61558486 | MS.gene20859:CDS |
| GTGTCAATCAATGTGTGGAA+AGG | 0.662829 | 1.3:+61558508 | MS.gene20859:CDS |
| GGTCCAGGAGACAGAAACCA+GGG | 0.668116 | 1.3:+61554421 | MS.gene20859:CDS |
| GACGAATCAGCAATTCCACA+AGG | 0.669739 | 1.3:+61562133 | MS.gene20859:CDS |
| TGCATGCAGTATACTCCATG+TGG | 0.671233 | 1.3:+61558485 | MS.gene20859:CDS |
| GTTGTTAGCAAGTATGTTGG+GGG | 0.673475 | 1.3:+61555230 | MS.gene20859:CDS |
| ATTGATATGCAGTGACAGTG+AGG | 0.679098 | 1.3:+61554769 | MS.gene20859:CDS |
| CAGGGACTCTTCACAGACGG+AGG | 0.683082 | 1.3:+61554327 | MS.gene20859:CDS |
| ACACTCTTTGTACAGCTGTG+GGG | 0.688643 | 1.3:+61560794 | MS.gene20859:intron |
| CGGCGTGGAGAAGGTCAATG+TGG | 0.689265 | 1.3:+61560840 | MS.gene20859:CDS |
| CGGATCTATTATGATCAACG+TGG | 0.691963 | 1.3:+61554737 | MS.gene20859:CDS |
| TGTGGGTGTCAATCAATGTG+TGG | 0.694307 | 1.3:+61558503 | MS.gene20859:CDS |
| AGGTAGCACTGATCACCACA+TGG | 0.697472 | 1.3:-61555827 | None:intergenic |
| GTACACTGGGAGAGCCACAT+CGG | 0.707893 | 1.3:+61560820 | MS.gene20859:CDS |
| AGTCACAAATCAGTCCGACA+CGG | 0.716243 | 1.3:+61556442 | MS.gene20859:CDS |
| GAAGAATTAACAGAACCTGA+CGG | 0.721323 | 1.3:+61554791 | MS.gene20859:CDS |
| AATGTCAGCAGTATCAACCA+GGG | 0.730778 | 1.3:+61554309 | MS.gene20859:CDS |
| AAGACATGCCATCTAGACCG+AGG | 0.737982 | 1.3:+61558360 | MS.gene20859:CDS |
| TCAGGTTTACGAGCCCATGG+AGG | 0.763936 | 1.3:-61562097 | None:intergenic |
| GATTACCTAGGAGAGTACAC+GGG | 0.774788 | 1.3:+61561149 | MS.gene20859:CDS |
| GCTGAAATAATAGACCTGTG+GGG | 0.791200 | 1.3:-61557407 | None:intergenic |
| GTAGGTGATAGAAAACCATG+TGG | 0.821461 | 1.3:+61555812 | MS.gene20859:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 61553677 | 61562183 | 61553677 | ID=MS.gene20859 |
| chr1.3 | mRNA | 61553677 | 61562183 | 61553677 | ID=MS.gene20859.t1;Parent=MS.gene20859 |
| chr1.3 | exon | 61553677 | 61553679 | 61553677 | ID=MS.gene20859.t1.exon1;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61553677 | 61553679 | 61553677 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61553877 | 61553969 | 61553877 | ID=MS.gene20859.t1.exon2;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61553877 | 61553969 | 61553877 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61554259 | 61554530 | 61554259 | ID=MS.gene20859.t1.exon3;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61554259 | 61554530 | 61554259 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61554694 | 61554855 | 61554694 | ID=MS.gene20859.t1.exon4;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61554694 | 61554855 | 61554694 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61555187 | 61555271 | 61555187 | ID=MS.gene20859.t1.exon5;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61555187 | 61555271 | 61555187 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61555416 | 61555571 | 61555416 | ID=MS.gene20859.t1.exon6;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61555416 | 61555571 | 61555416 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61555655 | 61555702 | 61555655 | ID=MS.gene20859.t1.exon7;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61555655 | 61555702 | 61555655 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61555782 | 61555853 | 61555782 | ID=MS.gene20859.t1.exon8;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61555782 | 61555853 | 61555782 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61556233 | 61556726 | 61556233 | ID=MS.gene20859.t1.exon9;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61556233 | 61556726 | 61556233 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61557322 | 61557475 | 61557322 | ID=MS.gene20859.t1.exon10;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61557322 | 61557475 | 61557322 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61558356 | 61558576 | 61558356 | ID=MS.gene20859.t1.exon11;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61558356 | 61558576 | 61558356 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61559021 | 61559152 | 61559021 | ID=MS.gene20859.t1.exon12;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61559021 | 61559152 | 61559021 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61560809 | 61560896 | 61560809 | ID=MS.gene20859.t1.exon13;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61560809 | 61560896 | 61560809 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61561008 | 61561055 | 61561008 | ID=MS.gene20859.t1.exon14;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61561008 | 61561055 | 61561008 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61561131 | 61561259 | 61561131 | ID=MS.gene20859.t1.exon15;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61561131 | 61561259 | 61561131 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61561485 | 61561562 | 61561485 | ID=MS.gene20859.t1.exon16;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61561485 | 61561562 | 61561485 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| chr1.3 | exon | 61561992 | 61562183 | 61561992 | ID=MS.gene20859.t1.exon17;Parent=MS.gene20859.t1 |
| chr1.3 | CDS | 61561992 | 61562183 | 61561992 | ID=cds.MS.gene20859.t1;Parent=MS.gene20859.t1 |
| Gene Sequence |
| Protein sequence |
