Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044295.t1 | XP_013461155.1 | 95.5 | 355 | 14 | 1 | 1 | 353 | 1 | 355 | 2.50E-183 | 651.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044295.t1 | Q5EAE0 | 35.5 | 375 | 203 | 5 | 7 | 348 | 7 | 375 | 5.2e-57 | 223.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044295.t1 | A0A072UZF4 | 95.5 | 355 | 14 | 1 | 1 | 353 | 1 | 355 | 1.8e-183 | 651.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044295 | MS.gene89501 | PPI |
| MS.gene044295 | MS.gene010234 | PPI |
| MS.gene044295 | MS.gene063045 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044295.t1 | MTR_3g081480 | 98.310 | 355 | 4 | 1 | 1 | 353 | 1 | 355 | 0.0 | 722 |
| MS.gene044295.t1 | MTR_5g062720 | 35.809 | 377 | 201 | 5 | 7 | 348 | 8 | 378 | 4.00e-75 | 237 |
| MS.gene044295.t1 | MTR_4g094255 | 35.616 | 365 | 200 | 8 | 7 | 340 | 8 | 368 | 5.20e-71 | 226 |
| MS.gene044295.t1 | MTR_5g062720 | 32.781 | 302 | 162 | 5 | 7 | 273 | 8 | 303 | 6.66e-48 | 164 |
| MS.gene044295.t1 | MTR_4g094255 | 34.629 | 283 | 150 | 8 | 89 | 340 | 1 | 279 | 2.14e-44 | 154 |
| MS.gene044295.t1 | MTR_4g080800 | 31.776 | 214 | 106 | 8 | 159 | 348 | 273 | 470 | 8.68e-17 | 81.6 |
| MS.gene044295.t1 | MTR_2g083260 | 31.455 | 213 | 112 | 9 | 162 | 353 | 279 | 478 | 2.33e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044295.t1 | AT3G22290 | 80.508 | 354 | 66 | 3 | 1 | 352 | 1 | 353 | 0.0 | 602 |
| MS.gene044295.t1 | AT3G22290 | 80.508 | 354 | 66 | 3 | 1 | 352 | 1 | 353 | 0.0 | 602 |
| MS.gene044295.t1 | AT1G36050 | 35.185 | 378 | 212 | 6 | 2 | 348 | 3 | 378 | 1.11e-72 | 231 |
| MS.gene044295.t1 | AT1G22200 | 34.121 | 381 | 214 | 6 | 1 | 348 | 2 | 378 | 7.08e-72 | 229 |
| MS.gene044295.t1 | AT1G36050 | 35.185 | 378 | 212 | 6 | 2 | 348 | 3 | 378 | 1.60e-71 | 231 |
| MS.gene044295.t1 | AT1G22200 | 33.333 | 339 | 189 | 6 | 1 | 306 | 2 | 336 | 2.75e-58 | 192 |
| MS.gene044295.t1 | AT4G27080 | 29.435 | 248 | 134 | 10 | 121 | 340 | 231 | 465 | 1.82e-19 | 89.7 |
| MS.gene044295.t1 | AT4G27080 | 29.839 | 248 | 133 | 11 | 121 | 340 | 283 | 517 | 2.33e-19 | 89.7 |
| MS.gene044295.t1 | AT3G20560 | 30.268 | 261 | 144 | 11 | 121 | 353 | 231 | 481 | 2.50e-18 | 86.3 |
| MS.gene044295.t1 | AT1G50950 | 29.954 | 217 | 122 | 8 | 152 | 348 | 271 | 477 | 1.64e-16 | 80.9 |
| MS.gene044295.t1 | AT1G50950 | 29.954 | 217 | 122 | 8 | 152 | 348 | 276 | 482 | 1.75e-16 | 80.9 |
Find 69 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTCTGTTGCAGGTTTA+TGG | 0.190697 | 3.3:+68935328 | MS.gene044295:intron |
| GTTATGAATTCCTGGATATT+TGG | 0.195825 | 3.3:-68935912 | None:intergenic |
| TTATGAATTCCTGGATATTT+GGG | 0.205707 | 3.3:-68935911 | None:intergenic |
| AACAGTTATGGACAGATAAT+TGG | 0.226761 | 3.3:+68933320 | MS.gene044295:CDS |
| GATCATTGGTTTGATTATAA+TGG | 0.293746 | 3.3:+68930855 | MS.gene044295:CDS |
| GTTATCCATGATTTGTCATT+TGG | 0.304688 | 3.3:+68935887 | MS.gene044295:CDS |
| TGCCTCCTTCACCTTCTTGA+TGG | 0.309665 | 3.3:-68935203 | None:intergenic |
| AATGTCATATTTATATGAAT+TGG | 0.314883 | 3.3:-68931667 | None:intergenic |
| TTAGCCCATGCACTGAAATA+TGG | 0.324151 | 3.3:-68935384 | None:intergenic |
| CAGCTTCGTTTGAACAGTTA+TGG | 0.327126 | 3.3:+68933308 | MS.gene044295:intron |
| TTGATTGCAGTTTCGATCAT+TGG | 0.357208 | 3.3:+68930841 | MS.gene044295:intron |
| CGATCAAATTGACTAGTAAT+GGG | 0.358497 | 3.3:-68936154 | None:intergenic |
| TTAGATGTTCAAAGGGTTGC+TGG | 0.373432 | 3.3:+68935355 | MS.gene044295:CDS |
| GGTGGAACCTTTGCTGTAAC+AGG | 0.373701 | 3.3:+68936379 | MS.gene044295:CDS |
| TATATCTGATCTTGTTGAAA+AGG | 0.380648 | 3.3:+68933352 | MS.gene044295:CDS |
| TCAAGTGGGTTATGAATTCC+TGG | 0.392656 | 3.3:-68935920 | None:intergenic |
| TCCTTGATAGTGACAGTAAT+AGG | 0.399502 | 3.3:-68936307 | None:intergenic |
| CCGATCAAATTGACTAGTAA+TGG | 0.408677 | 3.3:-68936155 | None:intergenic |
| AAACATATATGTTGCACAAA+TGG | 0.412036 | 3.3:+68935405 | MS.gene044295:CDS |
| TACAACTTACACTGTTCATC+AGG | 0.414564 | 3.3:+68930912 | MS.gene044295:CDS |
| TACGTTGTTTCTGCACGAGT+TGG | 0.429726 | 3.3:+68930879 | MS.gene044295:CDS |
| CACCTAGCACGGCACAAAGC+CGG | 0.441915 | 3.3:-68936360 | None:intergenic |
| TTCCCTTCTTTACCTTGTGA+TGG | 0.448996 | 3.3:+68931688 | MS.gene044295:CDS |
| AAAACTCAATCTGGTGCTCT+TGG | 0.451292 | 3.3:+68930703 | MS.gene044295:CDS |
| GAGATATATCTATATTCAGT+TGG | 0.453984 | 3.3:-68936082 | None:intergenic |
| CAATTTGATCGGACATGGCC+AGG | 0.454262 | 3.3:+68936166 | MS.gene044295:CDS |
| TCATTTGGCCCCAAATATCC+AGG | 0.465213 | 3.3:+68935902 | MS.gene044295:CDS |
| AATTTCCATATTTCAGTGCA+TGG | 0.466918 | 3.3:+68935379 | MS.gene044295:CDS |
| TTGTTGCAGAAAACTCAATC+TGG | 0.467399 | 3.3:+68930694 | MS.gene044295:CDS |
| ACCTAGCACGGCACAAAGCC+GGG | 0.468081 | 3.3:-68936359 | None:intergenic |
| TGGATCTTGATACAAACATA+TGG | 0.471383 | 3.3:+68931882 | MS.gene044295:CDS |
| ACGTTGTTTCTGCACGAGTT+GGG | 0.475844 | 3.3:+68930880 | MS.gene044295:CDS |
| ATATCTGATCTTGTTGAAAA+GGG | 0.476430 | 3.3:+68933353 | MS.gene044295:CDS |
| TGGGGCCAAATGACAAATCA+TGG | 0.487288 | 3.3:-68935892 | None:intergenic |
| GCCTATTACTGTCACTATCA+AGG | 0.504629 | 3.3:+68936306 | MS.gene044295:CDS |
| CGGCTTTGTGCCGTGCTAGG+TGG | 0.508099 | 3.3:+68936361 | MS.gene044295:CDS |
| ACCCGGCTTTGTGCCGTGCT+AGG | 0.512689 | 3.3:+68936358 | MS.gene044295:CDS |
| ATTTCCATATTTCAGTGCAT+GGG | 0.517261 | 3.3:+68935380 | MS.gene044295:CDS |
| TAACCATCACAAGGTAAAGA+AGG | 0.521720 | 3.3:-68931691 | None:intergenic |
| ATTTACATCAACAGGCATGC+TGG | 0.524484 | 3.3:+68936914 | MS.gene044295:intron |
| GTGGATGCCATTGATATGTC+TGG | 0.530136 | 3.3:+68931848 | MS.gene044295:CDS |
| CTAGTCAATTTGATCGGACA+TGG | 0.531079 | 3.3:+68936161 | MS.gene044295:CDS |
| CAACAGGCATGCTGGACCGT+TGG | 0.533592 | 3.3:+68936922 | MS.gene044295:intron |
| ATCCTTGATGTCTCATCAAG+TGG | 0.543339 | 3.3:-68935935 | None:intergenic |
| AAAATTACCTGTTACAGCAA+AGG | 0.551485 | 3.3:-68936386 | None:intergenic |
| TTTCTCCAGATCTTCGATGC+GGG | 0.565812 | 3.3:+68935842 | MS.gene044295:intron |
| AGCAAAGGTTCCACCTAGCA+CGG | 0.569794 | 3.3:-68936371 | None:intergenic |
| CCATTACTAGTCAATTTGAT+CGG | 0.571487 | 3.3:+68936155 | MS.gene044295:CDS |
| AACCATCACAAGGTAAAGAA+GGG | 0.577515 | 3.3:-68931690 | None:intergenic |
| ATGTTTGCCAGACATATCAA+TGG | 0.583808 | 3.3:-68931855 | None:intergenic |
| CACTGAAAATACCATCAAGA+AGG | 0.590106 | 3.3:+68935192 | MS.gene044295:CDS |
| TACCATCAAGAAGGTGAAGG+AGG | 0.599854 | 3.3:+68935201 | MS.gene044295:CDS |
| ACCCACTTGATGAGACATCA+AGG | 0.600922 | 3.3:+68935933 | MS.gene044295:CDS |
| GATCAAATTGACTAGTAATG+GGG | 0.602587 | 3.3:-68936153 | None:intergenic |
| AAATACCATCAAGAAGGTGA+AGG | 0.608112 | 3.3:+68935198 | MS.gene044295:CDS |
| TCCTTGATGTCTCATCAAGT+GGG | 0.612215 | 3.3:-68935934 | None:intergenic |
| ATCAAATTGACTAGTAATGG+GGG | 0.614743 | 3.3:-68936152 | None:intergenic |
| GTAACTGAGAACTGATTAGT+CGG | 0.619257 | 3.3:-68936118 | None:intergenic |
| AGGATTCTGCATGATGCGAG+TGG | 0.621286 | 3.3:+68935953 | MS.gene044295:CDS |
| TATGAATTCCTGGATATTTG+GGG | 0.621776 | 3.3:-68935910 | None:intergenic |
| CAACGAGTCTGTACATCCAA+CGG | 0.621907 | 3.3:-68936938 | None:intergenic |
| AACAAATGATCCTCTGTGCG+AGG | 0.627162 | 3.3:-68930676 | None:intergenic |
| GATCATAACACACACAAGCA+TGG | 0.641030 | 3.3:+68933386 | MS.gene044295:CDS |
| TATGTCTGGCAAACATGAGG+TGG | 0.662844 | 3.3:+68931862 | MS.gene044295:CDS |
| TGCCGGTGCTAACCATCACA+AGG | 0.665432 | 3.3:-68931700 | None:intergenic |
| ATGTCTGTAGACTTGAAGCG+TGG | 0.684678 | 3.3:+68931634 | MS.gene044295:CDS |
| TGATATGTCTGGCAAACATG+AGG | 0.701769 | 3.3:+68931859 | MS.gene044295:CDS |
| TAATAAAATGAAGAAAACAA+CGG | 0.727854 | 3.3:-68936336 | None:intergenic |
| CGATGCATTTCCTCGCACAG+AGG | 0.733486 | 3.3:+68930666 | MS.gene044295:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTTAATATAATAAGATA+TGG | - | chr3.3:68932299-68932318 | None:intergenic | 10.0% |
| !!! | AACTTTTAAATACTATATAA+AGG | + | chr3.3:68935976-68935995 | MS.gene044295:CDS | 10.0% |
| !!! | ATTATTAAATATTGATTTTC+TGG | + | chr3.3:68936817-68936836 | MS.gene044295:intron | 10.0% |
| !!! | TTTTTGTTTAATAAATTTCT+GGG | + | chr3.3:68934014-68934033 | MS.gene044295:intron | 10.0% |
| !! | AACAAAAAATCTAAACTTTA+AGG | - | chr3.3:68930765-68930784 | None:intergenic | 15.0% |
| !! | AATGTCATATTTATATGAAT+TGG | - | chr3.3:68931670-68931689 | None:intergenic | 15.0% |
| !! | ATATTAAGTTTCTTTCAAAT+TGG | - | chr3.3:68935303-68935322 | None:intergenic | 15.0% |
| !! | ATTACTTATTTAAACACAAA+CGG | - | chr3.3:68933564-68933583 | None:intergenic | 15.0% |
| !! | TAAAAGTTAAATTTAACATC+AGG | + | chr3.3:68933832-68933851 | MS.gene044295:intron | 15.0% |
| !! | TAAATAGTTTCTTAATATGT+TGG | + | chr3.3:68931985-68932004 | MS.gene044295:intron | 15.0% |
| !! | TAATAAAATGAAGAAAACAA+CGG | - | chr3.3:68936339-68936358 | None:intergenic | 15.0% |
| !! | TATAATAAAAAACATTTGAC+TGG | + | chr3.3:68936519-68936538 | MS.gene044295:intron | 15.0% |
| !! | TTCATTATATACATAAACTT+CGG | + | chr3.3:68932777-68932796 | MS.gene044295:intron | 15.0% |
| !! | TTTGATATGTTGATATTATT+TGG | + | chr3.3:68931509-68931528 | MS.gene044295:intron | 15.0% |
| !!! | ATTCATAATTTAAAACATGA+AGG | - | chr3.3:68935786-68935805 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTTAATAAATTTC+TGG | + | chr3.3:68934013-68934032 | MS.gene044295:intron | 15.0% |
| !!! | TCTTATTAAAGTTATTTCTT+TGG | - | chr3.3:68935710-68935729 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTCTATTAAAAT+TGG | - | chr3.3:68933666-68933685 | None:intergenic | 15.0% |
| !!! | TTGTATTTAATTTTGGAATA+AGG | + | chr3.3:68931114-68931133 | MS.gene044295:intron | 15.0% |
| !!! | TTTTGTTTAATAAATTTCTG+GGG | + | chr3.3:68934015-68934034 | MS.gene044295:intron | 15.0% |
| !! | AAAAATAGACATCAATTCAA+AGG | + | chr3.3:68934327-68934346 | MS.gene044295:intron | 20.0% |
| !! | AAAATAGACATCAATTCAAA+GGG | + | chr3.3:68934328-68934347 | MS.gene044295:intron | 20.0% |
| !! | AAATAACCATTAATGATACA+GGG | - | chr3.3:68933264-68933283 | None:intergenic | 20.0% |
| !! | ACATAAAAAGAAATCCAAAA+AGG | - | chr3.3:68931928-68931947 | None:intergenic | 20.0% |
| !! | AGCTTAAAACTATAATCATA+TGG | - | chr3.3:68936443-68936462 | None:intergenic | 20.0% |
| !! | ATAGAGAGAAATTAAATCAT+AGG | - | chr3.3:68934901-68934920 | None:intergenic | 20.0% |
| !! | ATATGCTTATATCACTATAT+TGG | + | chr3.3:68932823-68932842 | MS.gene044295:intron | 20.0% |
| !! | ATTTAGAAAAACATGATTTC+TGG | - | chr3.3:68934973-68934992 | None:intergenic | 20.0% |
| !! | GTATTATAAATAAGTCCATT+CGG | - | chr3.3:68933025-68933044 | None:intergenic | 20.0% |
| !! | TAAATAACCATTAATGATAC+AGG | - | chr3.3:68933265-68933284 | None:intergenic | 20.0% |
| !! | TAACTGCAAATAAGTAAATA+AGG | + | chr3.3:68935635-68935654 | MS.gene044295:intron | 20.0% |
| !! | TTACTTATTTAAACACAAAC+GGG | - | chr3.3:68933563-68933582 | None:intergenic | 20.0% |
| !! | TTACTTATTTGCAGTTATTT+GGG | - | chr3.3:68935632-68935651 | None:intergenic | 20.0% |
| !! | TTTACTTATTTGCAGTTATT+TGG | - | chr3.3:68935633-68935652 | None:intergenic | 20.0% |
| !!! | AATTTCTTCTTTTTAATTCC+GGG | - | chr3.3:68932887-68932906 | None:intergenic | 20.0% |
| !!! | ATATCACTATATTGGTTTTT+GGG | + | chr3.3:68932831-68932850 | MS.gene044295:intron | 20.0% |
| !!! | ATGTTGTTAAAAAGTTTTAG+TGG | + | chr3.3:68932475-68932494 | MS.gene044295:intron | 20.0% |
| !!! | ATTCTTTTATAGTTCTTTTC+TGG | + | chr3.3:68935074-68935093 | MS.gene044295:intron | 20.0% |
| !!! | CAATTTCTTCTTTTTAATTC+CGG | - | chr3.3:68932888-68932907 | None:intergenic | 20.0% |
| !!! | CATTATACATTTATGAGTTT+TGG | + | chr3.3:68936210-68936229 | MS.gene044295:intron | 20.0% |
| !!! | CTAAACTTTAAGGAAAAAAA+TGG | - | chr3.3:68930755-68930774 | None:intergenic | 20.0% |
| !!! | GTTGTTACTTGTTAATTAAT+AGG | + | chr3.3:68933187-68933206 | MS.gene044295:intron | 20.0% |
| !!! | TAGATTCATTTCCTTTTTTT+GGG | + | chr3.3:68933502-68933521 | MS.gene044295:intron | 20.0% |
| !!! | TATATCACTATATTGGTTTT+TGG | + | chr3.3:68932830-68932849 | MS.gene044295:intron | 20.0% |
| !!! | TCTTGAATATTGTTTTAACA+TGG | + | chr3.3:68936017-68936036 | MS.gene044295:intron | 20.0% |
| !!! | TTCTAGGAAAAAATATTTCA+AGG | - | chr3.3:68935522-68935541 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCCATTTCATTA+GGG | - | chr3.3:68934310-68934329 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTCCATTTCATT+AGG | - | chr3.3:68934311-68934330 | None:intergenic | 20.0% |
| ! | AAAACCATCACTATCAAATT+AGG | - | chr3.3:68935825-68935844 | None:intergenic | 25.0% |
| ! | AAAATAGACTTAAGATCAGA+AGG | - | chr3.3:68933002-68933021 | None:intergenic | 25.0% |
| ! | AAACATATATGTTGCACAAA+TGG | + | chr3.3:68935405-68935424 | MS.gene044295:CDS | 25.0% |
| ! | AAATAGACTTAAGATCAGAA+GGG | - | chr3.3:68933001-68933020 | None:intergenic | 25.0% |
| ! | AACTGTAGGTTAAAATTACA+TGG | + | chr3.3:68933442-68933461 | MS.gene044295:intron | 25.0% |
| ! | AAGAGATAATTGATGAAGAA+AGG | - | chr3.3:68932588-68932607 | None:intergenic | 25.0% |
| ! | ACGATCTATTATTAAACTAC+AGG | + | chr3.3:68933984-68934003 | MS.gene044295:intron | 25.0% |
| ! | ACTTATGCTAATATACACAT+AGG | - | chr3.3:68931475-68931494 | None:intergenic | 25.0% |
| ! | AGGGATTAAGAATACTAAAA+AGG | - | chr3.3:68933245-68933264 | None:intergenic | 25.0% |
| ! | AGTTAAATTTAACATCAGGT+TGG | + | chr3.3:68933836-68933855 | MS.gene044295:intron | 25.0% |
| ! | ATATCTGATCTTGTTGAAAA+GGG | + | chr3.3:68933353-68933372 | MS.gene044295:CDS | 25.0% |
| ! | ATTTATGAACGTTCTTTGTT+TGG | - | chr3.3:68934792-68934811 | None:intergenic | 25.0% |
| ! | CAAACATACAAATTAACAGA+AGG | - | chr3.3:68932652-68932671 | None:intergenic | 25.0% |
| ! | CGGAATTAAAAAGAAGAAAT+TGG | + | chr3.3:68932886-68932905 | MS.gene044295:intron | 25.0% |
| ! | GAGATATATCTATATTCAGT+TGG | - | chr3.3:68936085-68936104 | None:intergenic | 25.0% |
| ! | GCAAGAAACAAAATAAACTA+AGG | - | chr3.3:68936870-68936889 | None:intergenic | 25.0% |
| ! | GGGATTAAGAATACTAAAAA+GGG | - | chr3.3:68933244-68933263 | None:intergenic | 25.0% |
| ! | TAAAAATTGTCAACAGATGA+TGG | + | chr3.3:68935112-68935131 | MS.gene044295:intron | 25.0% |
| ! | TAGACAAATATTGCTTACTT+TGG | + | chr3.3:68932117-68932136 | MS.gene044295:intron | 25.0% |
| ! | TAGTGATATAAGCATATTGT+AGG | - | chr3.3:68932820-68932839 | None:intergenic | 25.0% |
| ! | TATATCTGATCTTGTTGAAA+AGG | + | chr3.3:68933352-68933371 | MS.gene044295:CDS | 25.0% |
| ! | TCAAAGGGATCTTATATATA+GGG | + | chr3.3:68934343-68934362 | MS.gene044295:intron | 25.0% |
| ! | TGTGTATATTAGCAAAAGTT+GGG | + | chr3.3:68931570-68931589 | MS.gene044295:intron | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+TGG | - | chr3.3:68931011-68931030 | None:intergenic | 25.0% |
| ! | TTAAGGAAAAAAATGGATCA+GGG | - | chr3.3:68930748-68930767 | None:intergenic | 25.0% |
| ! | TTATGAATTCCTGGATATTT+GGG | - | chr3.3:68935914-68935933 | None:intergenic | 25.0% |
| ! | TTCAAAGGGATCTTATATAT+AGG | + | chr3.3:68934342-68934361 | MS.gene044295:intron | 25.0% |
| ! | TTTAAGGAAAAAAATGGATC+AGG | - | chr3.3:68930749-68930768 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAATTCTGTTGC+AGG | + | chr3.3:68935321-68935340 | MS.gene044295:intron | 25.0% |
| !! | GGATTTCTTTTTATGTGTTT+TGG | + | chr3.3:68931932-68931951 | MS.gene044295:intron | 25.0% |
| !! | GTTTTCTTCATTTTATTACC+CGG | + | chr3.3:68936341-68936360 | MS.gene044295:CDS | 25.0% |
| !! | TATTTAGTGCCTTTTTAGAT+TGG | - | chr3.3:68931402-68931421 | None:intergenic | 25.0% |
| !! | TCAATTATTCTGTTTTCTTC+TGG | + | chr3.3:68932733-68932752 | MS.gene044295:intron | 25.0% |
| !! | TTTTCATAAGTTCTTCAAGA+TGG | - | chr3.3:68931264-68931283 | None:intergenic | 25.0% |
| !!! | AGATTCATTTCCTTTTTTTG+GGG | + | chr3.3:68933503-68933522 | MS.gene044295:intron | 25.0% |
| !!! | AGGAAGAATTTTAATCTGTA+AGG | - | chr3.3:68936846-68936865 | None:intergenic | 25.0% |
| !!! | ATAGTTTTAAGCTATAGCTT+TGG | + | chr3.3:68936450-68936469 | MS.gene044295:intron | 25.0% |
| !!! | CTAAAAAGGCACTAAATAAA+AGG | + | chr3.3:68931404-68931423 | MS.gene044295:intron | 25.0% |
| !!! | CTTTGTTTGGTTCAAAATTT+TGG | - | chr3.3:68934779-68934798 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGGGGATAATAAA+GGG | + | chr3.3:68933514-68933533 | MS.gene044295:intron | 25.0% |
| !!! | GATCATTGGTTTGATTATAA+TGG | + | chr3.3:68930855-68930874 | MS.gene044295:CDS | 25.0% |
| !!! | GTAATTTTAACCTACAGTTT+TGG | - | chr3.3:68933441-68933460 | None:intergenic | 25.0% |
| !!! | GTAGATTCATTTCCTTTTTT+TGG | + | chr3.3:68933501-68933520 | MS.gene044295:intron | 25.0% |
| !!! | GTTATTTACGCTAATTTGTT+TGG | + | chr3.3:68933277-68933296 | MS.gene044295:intron | 25.0% |
| !!! | TAAAAAGTTTTAGTGGAGAA+GGG | + | chr3.3:68932482-68932501 | MS.gene044295:intron | 25.0% |
| !!! | TATTTTTTCCTAGAACTTAC+AGG | + | chr3.3:68935527-68935546 | MS.gene044295:intron | 25.0% |
| !!! | TTAAAAAGTTTTAGTGGAGA+AGG | + | chr3.3:68932481-68932500 | MS.gene044295:intron | 25.0% |
| !!! | TTTTTTCTCCATTTCATTAG+GGG | - | chr3.3:68934309-68934328 | None:intergenic | 25.0% |
| AAAATTACCTGTTACAGCAA+AGG | - | chr3.3:68936389-68936408 | None:intergenic | 30.0% | |
| AACAGTTATGGACAGATAAT+TGG | + | chr3.3:68933320-68933339 | MS.gene044295:CDS | 30.0% | |
| AACATGTTAAATATGCACAG+TGG | + | chr3.3:68933165-68933184 | MS.gene044295:intron | 30.0% | |
| AACTGAAATAACACAACTTG+GGG | - | chr3.3:68932629-68932648 | None:intergenic | 30.0% | |
| AATATGTTGGTATCCACTAT+AGG | + | chr3.3:68931998-68932017 | MS.gene044295:intron | 30.0% | |
| AATTGATGAAGAAAGGAGTT+GGG | - | chr3.3:68932581-68932600 | None:intergenic | 30.0% | |
| AATTTCCATATTTCAGTGCA+TGG | + | chr3.3:68935379-68935398 | MS.gene044295:CDS | 30.0% | |
| ACTTTGAATTAACCCTATAG+TGG | - | chr3.3:68932014-68932033 | None:intergenic | 30.0% | |
| AGTAATCTTGTCCTAAATGT+TGG | + | chr3.3:68933578-68933597 | MS.gene044295:intron | 30.0% | |
| ATATGTTGGTATCCACTATA+GGG | + | chr3.3:68931999-68932018 | MS.gene044295:intron | 30.0% | |
| ATCAAATTGACTAGTAATGG+GGG | - | chr3.3:68936155-68936174 | None:intergenic | 30.0% | |
| ATTCAATATGTCAGGAATCT+TGG | - | chr3.3:68934949-68934968 | None:intergenic | 30.0% | |
| ATTTCCATATTTCAGTGCAT+GGG | + | chr3.3:68935380-68935399 | MS.gene044295:CDS | 30.0% | |
| ATTTGGAAGGAAGAAAACAT+GGG | - | chr3.3:68934694-68934713 | None:intergenic | 30.0% | |
| CAAAAATACCCCTAATGAAA+TGG | + | chr3.3:68934298-68934317 | MS.gene044295:intron | 30.0% | |
| CCATTACTAGTCAATTTGAT+CGG | + | chr3.3:68936155-68936174 | MS.gene044295:CDS | 30.0% | |
| CCTTTATTATCCCCAAAAAA+AGG | - | chr3.3:68933516-68933535 | None:intergenic | 30.0% | |
| CGATCAAATTGACTAGTAAT+GGG | - | chr3.3:68936157-68936176 | None:intergenic | 30.0% | |
| CTAATATGTGTTGTGAAAAC+TGG | - | chr3.3:68936670-68936689 | None:intergenic | 30.0% | |
| CTGTGTATATTAGCAAAAGT+TGG | + | chr3.3:68931569-68931588 | MS.gene044295:intron | 30.0% | |
| CTTAATCCCTGTATCATTAA+TGG | + | chr3.3:68933255-68933274 | MS.gene044295:intron | 30.0% | |
| CTTCAAATTCAATCTCTGTT+TGG | - | chr3.3:68932243-68932262 | None:intergenic | 30.0% | |
| GAAACAAAATAAACTAAGGC+AGG | - | chr3.3:68936866-68936885 | None:intergenic | 30.0% | |
| GAACTGAAATAACACAACTT+GGG | - | chr3.3:68932630-68932649 | None:intergenic | 30.0% | |
| GACCTTATAAGTTAAACCTT+TGG | + | chr3.3:68933947-68933966 | MS.gene044295:intron | 30.0% | |
| GATCAAATTGACTAGTAATG+GGG | - | chr3.3:68936156-68936175 | None:intergenic | 30.0% | |
| GCATATAATTCCAAAACTGT+AGG | + | chr3.3:68933428-68933447 | MS.gene044295:intron | 30.0% | |
| GTAAGATAATAGTGCTATCA+CGG | + | chr3.3:68932413-68932432 | MS.gene044295:intron | 30.0% | |
| GTAGTAGATATTCCAGTTAA+AGG | - | chr3.3:68936413-68936432 | None:intergenic | 30.0% | |
| GTTATGAATTCCTGGATATT+TGG | - | chr3.3:68935915-68935934 | None:intergenic | 30.0% | |
| TAAATCATAGGATTCAGCAA+GGG | - | chr3.3:68934889-68934908 | None:intergenic | 30.0% | |
| TAATTGATGAAGAAAGGAGT+TGG | - | chr3.3:68932582-68932601 | None:intergenic | 30.0% | |
| TATAGCATAAGTGCTTATTG+CGG | + | chr3.3:68931040-68931059 | MS.gene044295:intron | 30.0% | |
| TATGAATTCCTGGATATTTG+GGG | - | chr3.3:68935913-68935932 | None:intergenic | 30.0% | |
| TCAAATGAGCCAATCTAAAA+AGG | + | chr3.3:68931390-68931409 | MS.gene044295:intron | 30.0% | |
| TCTATTATTAAACTACAGGC+TGG | + | chr3.3:68933988-68934007 | MS.gene044295:intron | 30.0% | |
| TGAAAACTGAACTGTTATTC+AGG | - | chr3.3:68936043-68936062 | None:intergenic | 30.0% | |
| TGAAGAGGGACTTATAAAAA+GGG | - | chr3.3:68934249-68934268 | None:intergenic | 30.0% | |
| TGGATCTTGATACAAACATA+TGG | + | chr3.3:68931882-68931901 | MS.gene044295:CDS | 30.0% | |
| TGGGACAGAATAATAAACAA+GGG | - | chr3.3:68935613-68935632 | None:intergenic | 30.0% | |
| TTAAATCATAGGATTCAGCA+AGG | - | chr3.3:68934890-68934909 | None:intergenic | 30.0% | |
| TTAATAGGTTCTCCTATTGA+TGG | + | chr3.3:68932350-68932369 | MS.gene044295:intron | 30.0% | |
| TTAATTCTGTTGCAGGTTTA+TGG | + | chr3.3:68935328-68935347 | MS.gene044295:intron | 30.0% | |
| TTCAATATGTCAGGAATCTT+GGG | - | chr3.3:68934948-68934967 | None:intergenic | 30.0% | |
| TTCCTATTTATAGCGTGATA+GGG | - | chr3.3:68933147-68933166 | None:intergenic | 30.0% | |
| TTGAAGAGGGACTTATAAAA+AGG | - | chr3.3:68934250-68934269 | None:intergenic | 30.0% | |
| TTGGGACAGAATAATAAACA+AGG | - | chr3.3:68935614-68935633 | None:intergenic | 30.0% | |
| ! | CAGGTAATTTTTCCTTTAAC+TGG | + | chr3.3:68936398-68936417 | MS.gene044295:intron | 30.0% |
| ! | GACAGACAAATTTTACAAGA+GGG | - | chr3.3:68934227-68934246 | None:intergenic | 30.0% |
| ! | GTTATCCATGATTTGTCATT+TGG | + | chr3.3:68935887-68935906 | MS.gene044295:CDS | 30.0% |
| ! | TACATGGTTTGCATTTGATT+GGG | + | chr3.3:68933458-68933477 | MS.gene044295:intron | 30.0% |
| ! | TATTGTGATGGTGACTTAAT+AGG | + | chr3.3:68932335-68932354 | MS.gene044295:intron | 30.0% |
| ! | TCTTAAGTCTATTTTCCGAA+TGG | + | chr3.3:68933007-68933026 | MS.gene044295:intron | 30.0% |
| ! | TGCCAAAGGTTTAACTTATA+AGG | - | chr3.3:68933952-68933971 | None:intergenic | 30.0% |
| ! | TTACATGGTTTGCATTTGAT+TGG | + | chr3.3:68933457-68933476 | MS.gene044295:intron | 30.0% |
| ! | TTGCTTACTTTGGAAGATTT+AGG | + | chr3.3:68932127-68932146 | MS.gene044295:intron | 30.0% |
| !! | ATGGTGTTTTAGATGTTCAA+AGG | + | chr3.3:68935347-68935366 | MS.gene044295:CDS | 30.0% |
| !! | GAGTTTCATTTTTCGTTTTG+AGG | + | chr3.3:68931747-68931766 | MS.gene044295:intron | 30.0% |
| !! | GATACCTAATTTGATAGTGA+TGG | + | chr3.3:68935818-68935837 | MS.gene044295:intron | 30.0% |
| !! | GTTTGGTTCAAAATTTTGGA+GGG | - | chr3.3:68934775-68934794 | None:intergenic | 30.0% |
| !! | TGGTGTTTTAGATGTTCAAA+GGG | + | chr3.3:68935348-68935367 | MS.gene044295:CDS | 30.0% |
| !! | TGTTTGGTTCAAAATTTTGG+AGG | - | chr3.3:68934776-68934795 | None:intergenic | 30.0% |
| !!! | AGCTTGTTAATAGACCTTTT+TGG | + | chr3.3:68931911-68931930 | MS.gene044295:intron | 30.0% |
| !!! | CCTTTTTTTGGGGATAATAA+AGG | + | chr3.3:68933513-68933532 | MS.gene044295:intron | 30.0% |
| !!! | TTTCATTAGGGGTATTTTTG+TGG | - | chr3.3:68934298-68934317 | None:intergenic | 30.0% |
| AAAAAATGGAGAAGGATGCA+GGG | + | chr3.3:68935228-68935247 | MS.gene044295:CDS | 35.0% | |
| AAAGTTGAGAGGATGTATCT+TGG | + | chr3.3:68934738-68934757 | MS.gene044295:intron | 35.0% | |
| AAATACCATCAAGAAGGTGA+AGG | + | chr3.3:68935198-68935217 | MS.gene044295:CDS | 35.0% | |
| AACATTTATCACCTGCAACA+TGG | + | chr3.3:68934084-68934103 | MS.gene044295:intron | 35.0% | |
| AACCATCACAAGGTAAAGAA+GGG | - | chr3.3:68931693-68931712 | None:intergenic | 35.0% | |
| AAGAAGTAGTTGAGAGAAGT+TGG | - | chr3.3:68933098-68933117 | None:intergenic | 35.0% | |
| AAGGGATTGTAGCAATTTCA+TGG | + | chr3.3:68932500-68932519 | MS.gene044295:intron | 35.0% | |
| ACAGATCACTATTAAGCTGA+GGG | - | chr3.3:68932186-68932205 | None:intergenic | 35.0% | |
| ACATGAAGCAGATAAAATGC+CGG | - | chr3.3:68931720-68931739 | None:intergenic | 35.0% | |
| ACCAACACATTTACATCAAC+AGG | + | chr3.3:68936906-68936925 | MS.gene044295:intron | 35.0% | |
| ACTTCAAACTAAATCCAACC+TGG | - | chr3.3:68936187-68936206 | None:intergenic | 35.0% | |
| AGAAAGGAGTTGGGAAAAAT+AGG | - | chr3.3:68932572-68932591 | None:intergenic | 35.0% | |
| AGAAGTAGTTGAGAGAAGTT+GGG | - | chr3.3:68933097-68933116 | None:intergenic | 35.0% | |
| AGATCTTCAGTCCAACATTT+AGG | - | chr3.3:68933592-68933611 | None:intergenic | 35.0% | |
| AGGGATCTTATATATAGGGA+CGG | + | chr3.3:68934347-68934366 | MS.gene044295:intron | 35.0% | |
| AGGGATTGTAGCAATTTCAT+GGG | + | chr3.3:68932501-68932520 | MS.gene044295:intron | 35.0% | |
| AGTTAAGTTTACGCAGTGTT+TGG | - | chr3.3:68934845-68934864 | None:intergenic | 35.0% | |
| ATATCGTGAAGCGACAATAA+TGG | + | chr3.3:68934446-68934465 | MS.gene044295:intron | 35.0% | |
| ATGTTTGCCAGACATATCAA+TGG | - | chr3.3:68931858-68931877 | None:intergenic | 35.0% | |
| CACTGAAAATACCATCAAGA+AGG | + | chr3.3:68935192-68935211 | MS.gene044295:CDS | 35.0% | |
| CAGACTGTTCAATATTGTGA+TGG | + | chr3.3:68932323-68932342 | MS.gene044295:intron | 35.0% | |
| CAGTTATTTAGTATGCAGTC+AGG | - | chr3.3:68933074-68933093 | None:intergenic | 35.0% | |
| CCGATCAAATTGACTAGTAA+TGG | - | chr3.3:68936158-68936177 | None:intergenic | 35.0% | |
| GAAGTGAAACATCCATCAAT+AGG | - | chr3.3:68932365-68932384 | None:intergenic | 35.0% | |
| GAGTGAATAGTGCATATACT+TGG | - | chr3.3:68933862-68933881 | None:intergenic | 35.0% | |
| GATTTGGAAGGAAGAAAACA+TGG | - | chr3.3:68934695-68934714 | None:intergenic | 35.0% | |
| GCAAGAATTCAAGCTAACTA+GGG | + | chr3.3:68936772-68936791 | MS.gene044295:intron | 35.0% | |
| GCTACATATGCAAAATCAAC+AGG | - | chr3.3:68936262-68936281 | None:intergenic | 35.0% | |
| GGAACTGAAATAACACAACT+TGG | - | chr3.3:68932631-68932650 | None:intergenic | 35.0% | |
| GGATATAGTATGCGCTTTAT+TGG | + | chr3.3:68933795-68933814 | MS.gene044295:intron | 35.0% | |
| GTAACTGAGAACTGATTAGT+CGG | - | chr3.3:68936121-68936140 | None:intergenic | 35.0% | |
| GTTCCTATTTATAGCGTGAT+AGG | - | chr3.3:68933148-68933167 | None:intergenic | 35.0% | |
| TAAAAAATGGAGAAGGATGC+AGG | + | chr3.3:68935227-68935246 | MS.gene044295:CDS | 35.0% | |
| TAACCATCACAAGGTAAAGA+AGG | - | chr3.3:68931694-68931713 | None:intergenic | 35.0% | |
| TACAACTTACACTGTTCATC+AGG | + | chr3.3:68930912-68930931 | MS.gene044295:CDS | 35.0% | |
| TACCCTATCACGCTATAAAT+AGG | + | chr3.3:68933142-68933161 | MS.gene044295:intron | 35.0% | |
| TATAGCATAAGTGCTTATCG+TGG | + | chr3.3:68931169-68931188 | MS.gene044295:intron | 35.0% | |
| TATATCCGACATGATCATAG+AGG | - | chr3.3:68933782-68933801 | None:intergenic | 35.0% | |
| TATTCACTCTTAATCCCCAT+CGG | + | chr3.3:68933873-68933892 | MS.gene044295:intron | 35.0% | |
| TCAATCTCGCAAGTCATAAT+CGG | - | chr3.3:68936569-68936588 | None:intergenic | 35.0% | |
| TCTTACACTAGTGACTGATA+TGG | - | chr3.3:68932399-68932418 | None:intergenic | 35.0% | |
| TGCAAGAATTCAAGCTAACT+AGG | + | chr3.3:68936771-68936790 | MS.gene044295:intron | 35.0% | |
| TGCAGGTGATAAATGTTGAA+TGG | - | chr3.3:68934081-68934100 | None:intergenic | 35.0% | |
| TGGTTCAACTGTATTTGTAC+CGG | + | chr3.3:68936539-68936558 | MS.gene044295:intron | 35.0% | |
| TTGATTGCAGTTTCGATCAT+TGG | + | chr3.3:68930841-68930860 | MS.gene044295:intron | 35.0% | |
| TTGTTGCAGAAAACTCAATC+TGG | + | chr3.3:68930694-68930713 | MS.gene044295:CDS | 35.0% | |
| TTTGGAAGGAAGAAAACATG+GGG | - | chr3.3:68934693-68934712 | None:intergenic | 35.0% | |
| ! | AATTTGAAGTTTCCTATGCG+AGG | + | chr3.3:68932254-68932273 | MS.gene044295:intron | 35.0% |
| ! | AGTCTTGTATCCTTCCATAT+CGG | + | chr3.3:68932031-68932050 | MS.gene044295:intron | 35.0% |
| ! | ATAGGTTTTTCGTCCATTGT+TGG | - | chr3.3:68932554-68932573 | None:intergenic | 35.0% |
| ! | ATTGATGGATGTTTCACTTC+TGG | + | chr3.3:68932365-68932384 | MS.gene044295:intron | 35.0% |
| ! | ATTTTCAGTGGCTTCATCAA+AGG | - | chr3.3:68935182-68935201 | None:intergenic | 35.0% |
| ! | GAGGCATTAAAAAATGGAGA+AGG | + | chr3.3:68935220-68935239 | MS.gene044295:CDS | 35.0% |
| ! | GGACAGACAAATTTTACAAG+AGG | - | chr3.3:68934228-68934247 | None:intergenic | 35.0% |
| ! | GTTTTTGTCAAATGTGCCAA+AGG | - | chr3.3:68933966-68933985 | None:intergenic | 35.0% |
| ! | TTGATGGATGTTTCACTTCT+GGG | + | chr3.3:68932366-68932385 | MS.gene044295:intron | 35.0% |
| ! | TTTCTGGCATTCAATATGTC+AGG | - | chr3.3:68934957-68934976 | None:intergenic | 35.0% |
| !! | CAAAATTTTGGAGGGAATTG+AGG | - | chr3.3:68934767-68934786 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTATTTTCAG+TGG | - | chr3.3:68935194-68935213 | None:intergenic | 35.0% |
| !! | GGTTATTTTCATTTGACGAC+TGG | + | chr3.3:68933479-68933498 | MS.gene044295:intron | 35.0% |
| !! | GGTTGGATTTAGTTTGAAGT+TGG | + | chr3.3:68936187-68936206 | MS.gene044295:intron | 35.0% |
| !! | GGTTTAAGTTGAAGAGTTCT+CGG | + | chr3.3:68934601-68934620 | MS.gene044295:intron | 35.0% |
| !! | GTGAAGGAGGCATTAAAAAA+TGG | + | chr3.3:68935214-68935233 | MS.gene044295:CDS | 35.0% |
| !! | TCCTTGATAGTGACAGTAAT+AGG | - | chr3.3:68936310-68936329 | None:intergenic | 35.0% |
| !! | TTGCGAGATTGACTGATTTT+CGG | + | chr3.3:68936577-68936596 | MS.gene044295:intron | 35.0% |
| !!! | ATTGACTGATTTTCGGGTTA+AGG | + | chr3.3:68936584-68936603 | MS.gene044295:intron | 35.0% |
| !!! | GTTCTGTGTTTTTTCCGATA+TGG | - | chr3.3:68932048-68932067 | None:intergenic | 35.0% |
| !!! | TGTGTTTTTTCCGATATGGA+AGG | - | chr3.3:68932044-68932063 | None:intergenic | 35.0% |
| AAAACTCAATCTGGTGCTCT+TGG | + | chr3.3:68930703-68930722 | MS.gene044295:CDS | 40.0% | |
| ACAAGAGGGTCTTACACATA+AGG | - | chr3.3:68934213-68934232 | None:intergenic | 40.0% | |
| AGCAGCTAGTATACCAACAA+TGG | + | chr3.3:68932538-68932557 | MS.gene044295:intron | 40.0% | |
| ATCCTTGATGTCTCATCAAG+TGG | - | chr3.3:68935938-68935957 | None:intergenic | 40.0% | |
| ATGCATCTTGTAGCTTGAAG+AGG | - | chr3.3:68934264-68934283 | None:intergenic | 40.0% | |
| ATGCATTGTTAGCACTCTGA+AGG | - | chr3.3:68932973-68932992 | None:intergenic | 40.0% | |
| ATGGGTGACAATAGATGTGA+TGG | + | chr3.3:68934498-68934517 | MS.gene044295:intron | 40.0% | |
| ATTCACTCTTAATCCCCATC+GGG | + | chr3.3:68933874-68933893 | MS.gene044295:intron | 40.0% | |
| ATTTACATCAACAGGCATGC+TGG | + | chr3.3:68936914-68936933 | MS.gene044295:intron | 40.0% | |
| CACAGATCACTATTAAGCTG+AGG | - | chr3.3:68932187-68932206 | None:intergenic | 40.0% | |
| CAGCTTCGTTTGAACAGTTA+TGG | + | chr3.3:68933308-68933327 | MS.gene044295:intron | 40.0% | |
| CTAGTCAATTTGATCGGACA+TGG | + | chr3.3:68936161-68936180 | MS.gene044295:CDS | 40.0% | |
| GATCATAACACACACAAGCA+TGG | + | chr3.3:68933386-68933405 | MS.gene044295:CDS | 40.0% | |
| GATCTTATATATAGGGACGG+AGG | + | chr3.3:68934350-68934369 | MS.gene044295:intron | 40.0% | |
| GCCTATTACTGTCACTATCA+AGG | + | chr3.3:68936306-68936325 | MS.gene044295:CDS | 40.0% | |
| GCCTGTTGATGTAAATGTGT+TGG | - | chr3.3:68936910-68936929 | None:intergenic | 40.0% | |
| GGACTGAAGATCTCAATGAA+AGG | + | chr3.3:68933599-68933618 | MS.gene044295:intron | 40.0% | |
| TACCTGAACCTGTAAGTTCT+AGG | - | chr3.3:68935538-68935557 | None:intergenic | 40.0% | |
| TCACAGCTTATGAGAGAGAA+GGG | - | chr3.3:68932070-68932089 | None:intergenic | 40.0% | |
| TCCTTGATGTCTCATCAAGT+GGG | - | chr3.3:68935937-68935956 | None:intergenic | 40.0% | |
| TCTCCCAAAAGCTTAAGCTA+AGG | - | chr3.3:68933735-68933754 | None:intergenic | 40.0% | |
| TGATATGTCTGGCAAACATG+AGG | + | chr3.3:68931859-68931878 | MS.gene044295:CDS | 40.0% | |
| TGCATCTTGTAGCTTGAAGA+GGG | - | chr3.3:68934263-68934282 | None:intergenic | 40.0% | |
| TTACACATAAGGACACAGGT+AGG | - | chr3.3:68934202-68934221 | None:intergenic | 40.0% | |
| TTAGATGTTCAAAGGGTTGC+TGG | + | chr3.3:68935355-68935374 | MS.gene044295:CDS | 40.0% | |
| TTAGCCCATGCACTGAAATA+TGG | - | chr3.3:68935387-68935406 | None:intergenic | 40.0% | |
| TTATCACCTGCAACATGGAA+AGG | + | chr3.3:68934089-68934108 | MS.gene044295:intron | 40.0% | |
| TTCACAGCTTATGAGAGAGA+AGG | - | chr3.3:68932071-68932090 | None:intergenic | 40.0% | |
| TTCCCTTCTTTACCTTGTGA+TGG | + | chr3.3:68931688-68931707 | MS.gene044295:CDS | 40.0% | |
| TTCCTAGAACTTACAGGTTC+AGG | + | chr3.3:68935533-68935552 | MS.gene044295:intron | 40.0% | |
| TTCTTCCCCTTGCAAATCAA+AGG | - | chr3.3:68934127-68934146 | None:intergenic | 40.0% | |
| ! | CTGCCTTAGCTTAAGCTTTT+GGG | + | chr3.3:68933729-68933748 | MS.gene044295:intron | 40.0% |
| ! | CTTTTTCTGCGATTCTCTGT+TGG | + | chr3.3:68931814-68931833 | MS.gene044295:intron | 40.0% |
| ! | GTGACAATAGATGTGATGGA+GGG | + | chr3.3:68934502-68934521 | MS.gene044295:intron | 40.0% |
| ! | TCTGCCTTAGCTTAAGCTTT+TGG | + | chr3.3:68933728-68933747 | MS.gene044295:intron | 40.0% |
| ! | TGGTGATGACATAAAGGTAG+AGG | + | chr3.3:68934634-68934653 | MS.gene044295:intron | 40.0% |
| ! | TTTTCTCCAGATCTTCGATG+CGG | + | chr3.3:68935841-68935860 | MS.gene044295:intron | 40.0% |
| !! | AGGGAAACCTTTGATTTGCA+AGG | + | chr3.3:68934117-68934136 | MS.gene044295:intron | 40.0% |
| !! | GGAAACCTTTGATTTGCAAG+GGG | + | chr3.3:68934119-68934138 | MS.gene044295:intron | 40.0% |
| !! | GGGAAACCTTTGATTTGCAA+GGG | + | chr3.3:68934118-68934137 | MS.gene044295:intron | 40.0% |
| !! | TCAAGTGGGTTATGAATTCC+TGG | - | chr3.3:68935923-68935942 | None:intergenic | 40.0% |
| !! | TGCGAGATTGACTGATTTTC+GGG | + | chr3.3:68936578-68936597 | MS.gene044295:intron | 40.0% |
| !!! | GCTTTTGGGAGAGTATTTCT+TGG | + | chr3.3:68933743-68933762 | MS.gene044295:intron | 40.0% |
| !!! | TCTGTTGGCAGTTTTAAGTG+TGG | + | chr3.3:68931829-68931848 | MS.gene044295:intron | 40.0% |
| AAACGGGAATGAGTTGTGGT+AGG | - | chr3.3:68933547-68933566 | None:intergenic | 45.0% | |
| AAATCCCTCCCAATGTTGGA+GGG | + | chr3.3:68934710-68934729 | MS.gene044295:intron | 45.0% | |
| AACAAATGATCCTCTGTGCG+AGG | - | chr3.3:68930679-68930698 | None:intergenic | 45.0% | |
| AACATTGGGAGGGATTTGGA+AGG | - | chr3.3:68934707-68934726 | None:intergenic | 45.0% | |
| AACCTCAAACCATCACTGTC+TGG | - | chr3.3:68934534-68934553 | None:intergenic | 45.0% | |
| AAGTTTACGCAGTGTTTGGC+AGG | - | chr3.3:68934841-68934860 | None:intergenic | 45.0% | |
| ACACAAACGGGAATGAGTTG+TGG | - | chr3.3:68933551-68933570 | None:intergenic | 45.0% | |
| ACCCACTTGATGAGACATCA+AGG | + | chr3.3:68935933-68935952 | MS.gene044295:CDS | 45.0% | |
| AGTTTACGCAGTGTTTGGCA+GGG | - | chr3.3:68934840-68934859 | None:intergenic | 45.0% | |
| ATCATAGGATTCAGCAAGGG+TGG | - | chr3.3:68934886-68934905 | None:intergenic | 45.0% | |
| ATGTCGCTATGATAGGAACC+CGG | + | chr3.3:68932866-68932885 | MS.gene044295:intron | 45.0% | |
| ATGTCTGTAGACTTGAAGCG+TGG | + | chr3.3:68931634-68931653 | MS.gene044295:CDS | 45.0% | |
| CAACGAGTCTGTACATCCAA+CGG | - | chr3.3:68936941-68936960 | None:intergenic | 45.0% | |
| CAGAGCCTCTATGATCATGT+CGG | + | chr3.3:68933774-68933793 | MS.gene044295:intron | 45.0% | |
| CATCGGGCTCTTATGTAAGA+GGG | + | chr3.3:68933890-68933909 | MS.gene044295:intron | 45.0% | |
| CTCTTACATAAGAGCCCGAT+GGG | - | chr3.3:68933891-68933910 | None:intergenic | 45.0% | |
| GACAATAATGGTGTGGAGCA+TGG | + | chr3.3:68934458-68934477 | MS.gene044295:intron | 45.0% | |
| GCAACATGGAAAGGAGGATA+GGG | + | chr3.3:68934098-68934117 | MS.gene044295:intron | 45.0% | |
| GCAAGTCATAATCGGTGAAC+CGG | - | chr3.3:68936561-68936580 | None:intergenic | 45.0% | |
| GGGACAATGAAGAGAAGATG+AGG | - | chr3.3:68934818-68934837 | None:intergenic | 45.0% | |
| GGTCTTACACATAAGGACAC+AGG | - | chr3.3:68934206-68934225 | None:intergenic | 45.0% | |
| GGTGACAATAGATGTGATGG+AGG | + | chr3.3:68934501-68934520 | MS.gene044295:intron | 45.0% | |
| GTGAAGCGACAATAATGGTG+TGG | + | chr3.3:68934451-68934470 | MS.gene044295:intron | 45.0% | |
| GTGGATGCCATTGATATGTC+TGG | + | chr3.3:68931848-68931867 | MS.gene044295:CDS | 45.0% | |
| TACCATCAAGAAGGTGAAGG+AGG | + | chr3.3:68935201-68935220 | MS.gene044295:CDS | 45.0% | |
| TACCTTGTGATGGTTAGCAC+CGG | + | chr3.3:68931698-68931717 | MS.gene044295:intron | 45.0% | |
| TATCCTCCTTTCCATGTTGC+AGG | - | chr3.3:68934098-68934117 | None:intergenic | 45.0% | |
| TATGTCTGGCAAACATGAGG+TGG | + | chr3.3:68931862-68931881 | MS.gene044295:CDS | 45.0% | |
| TCATTTGGCCCCAAATATCC+AGG | + | chr3.3:68935902-68935921 | MS.gene044295:CDS | 45.0% | |
| TCTTACATAAGAGCCCGATG+GGG | - | chr3.3:68933890-68933909 | None:intergenic | 45.0% | |
| TGATAGGGTAACTGCTGATG+CGG | - | chr3.3:68933132-68933151 | None:intergenic | 45.0% | |
| TGCAACATGGAAAGGAGGAT+AGG | + | chr3.3:68934097-68934116 | MS.gene044295:intron | 45.0% | |
| TGGGGCCAAATGACAAATCA+TGG | - | chr3.3:68935895-68935914 | None:intergenic | 45.0% | |
| TTCCAAATCCCTCCCAATGT+TGG | + | chr3.3:68934706-68934725 | MS.gene044295:intron | 45.0% | |
| TTTCCTATGCGAGGTTCGTT+GGG | + | chr3.3:68932263-68932282 | MS.gene044295:intron | 45.0% | |
| TTTCTCCAGATCTTCGATGC+GGG | + | chr3.3:68935842-68935861 | MS.gene044295:intron | 45.0% | |
| ! | AGTGATGGTTTGAGGTTGTC+TGG | + | chr3.3:68934537-68934556 | MS.gene044295:intron | 45.0% |
| ! | GGAGAGTGGTGATGACATAA+AGG | + | chr3.3:68934628-68934647 | MS.gene044295:intron | 45.0% |
| ! | TTTAGCTCCCCTCCAACATT+GGG | - | chr3.3:68934721-68934740 | None:intergenic | 45.0% |
| !! | ACGTTGTTTCTGCACGAGTT+GGG | + | chr3.3:68930880-68930899 | MS.gene044295:CDS | 45.0% |
| !! | AGCATTTGCTCTGGGATTAC+AGG | - | chr3.3:68932950-68932969 | None:intergenic | 45.0% |
| !! | CATTTGCTCTGGGATTACAG+GGG | - | chr3.3:68932948-68932967 | None:intergenic | 45.0% |
| !! | GCATTTGCTCTGGGATTACA+GGG | - | chr3.3:68932949-68932968 | None:intergenic | 45.0% |
| !! | TACGTTGTTTCTGCACGAGT+TGG | + | chr3.3:68930879-68930898 | MS.gene044295:CDS | 45.0% |
| !! | TCTGAAGGAGCATTTGCTCT+GGG | - | chr3.3:68932958-68932977 | None:intergenic | 45.0% |
| !! | TGGGAGAGTATTTCTTGGCA+CGG | + | chr3.3:68933748-68933767 | MS.gene044295:intron | 45.0% |
| !! | AGTATTTATTATTATTATAA+GGG | - | chr3.3:68934178-68934197 | None:intergenic | 5.0% |
| !! | TAGTATTTATTATTATTATA+AGG | - | chr3.3:68934179-68934198 | None:intergenic | 5.0% |
| !!! | GTTTTTTTTTTATTTAATTT+TGG | + | chr3.3:68930979-68930998 | MS.gene044295:intron | 5.0% |
| !!! | TTTTTTTTTGTATTTAATTT+TGG | + | chr3.3:68931107-68931126 | MS.gene044295:intron | 5.0% |
| AAATCCACTGCCACCAACGT+TGG | - | chr3.3:68934664-68934683 | None:intergenic | 50.0% | |
| AATCCACTGCCACCAACGTT+GGG | - | chr3.3:68934663-68934682 | None:intergenic | 50.0% | |
| AATCCCTCCCAATGTTGGAG+GGG | + | chr3.3:68934711-68934730 | MS.gene044295:intron | 50.0% | |
| AGCAAAGGTTCCACCTAGCA+CGG | - | chr3.3:68936374-68936393 | None:intergenic | 50.0% | |
| AGCCAGACAGTGATGGTTTG+AGG | + | chr3.3:68934529-68934548 | MS.gene044295:intron | 50.0% | |
| AGGATTCTGCATGATGCGAG+TGG | + | chr3.3:68935953-68935972 | MS.gene044295:CDS | 50.0% | |
| AGTTGAAGAGTTCTCGGCAG+TGG | + | chr3.3:68934607-68934626 | MS.gene044295:intron | 50.0% | |
| ATTCGTCGACAAGTCGAACG+AGG | + | chr3.3:68936635-68936654 | MS.gene044295:intron | 50.0% | |
| CAAATCCCTCCCAATGTTGG+AGG | + | chr3.3:68934709-68934728 | MS.gene044295:intron | 50.0% | |
| CAATTTGATCGGACATGGCC+AGG | + | chr3.3:68936166-68936185 | MS.gene044295:CDS | 50.0% | |
| CCATCGGGCTCTTATGTAAG+AGG | + | chr3.3:68933889-68933908 | MS.gene044295:intron | 50.0% | |
| CCTCTTACATAAGAGCCCGA+TGG | - | chr3.3:68933892-68933911 | None:intergenic | 50.0% | |
| CGAATCGAGAACGACGAATC+AGG | - | chr3.3:68936620-68936639 | None:intergenic | 50.0% | |
| CTCCAACATTGGGAGGGATT+TGG | - | chr3.3:68934711-68934730 | None:intergenic | 50.0% | |
| CTGCTCCATGTCGCTATGAT+AGG | + | chr3.3:68932859-68932878 | MS.gene044295:intron | 50.0% | |
| GGGTTCCTATCATAGCGACA+TGG | - | chr3.3:68932867-68932886 | None:intergenic | 50.0% | |
| GTTTACGCAGTGTTTGGCAG+GGG | - | chr3.3:68934839-68934858 | None:intergenic | 50.0% | |
| GTTTCCTATGCGAGGTTCGT+TGG | + | chr3.3:68932262-68932281 | MS.gene044295:intron | 50.0% | |
| TCAAACCATCACTGTCTGGC+TGG | - | chr3.3:68934530-68934549 | None:intergenic | 50.0% | |
| TCACCTGCAACATGGAAAGG+AGG | + | chr3.3:68934092-68934111 | MS.gene044295:intron | 50.0% | |
| TCTTTCCCGCATCGAAGATC+TGG | - | chr3.3:68935850-68935869 | None:intergenic | 50.0% | |
| TGCCAAGTTCTGCCATGTAG+TGG | + | chr3.3:68934386-68934405 | MS.gene044295:intron | 50.0% | |
| TGCCTCCTTCACCTTCTTGA+TGG | - | chr3.3:68935206-68935225 | None:intergenic | 50.0% | |
| TTTACGCAGTGTTTGGCAGG+GGG | - | chr3.3:68934838-68934857 | None:intergenic | 50.0% | |
| ! | AGCATGGTGTCAATGACGGA+GGG | + | chr3.3:68934474-68934493 | MS.gene044295:intron | 50.0% |
| ! | CTTTAGCTCCCCTCCAACAT+TGG | - | chr3.3:68934722-68934741 | None:intergenic | 50.0% |
| ! | GGTGGAACCTTTGCTGTAAC+AGG | + | chr3.3:68936379-68936398 | MS.gene044295:CDS | 50.0% |
| ! | GTGGAGCATGGTGTCAATGA+CGG | + | chr3.3:68934470-68934489 | MS.gene044295:intron | 50.0% |
| !! | CTCTGAAGGAGCATTTGCTC+TGG | - | chr3.3:68932959-68932978 | None:intergenic | 50.0% |
| AGGTAGAGGCTACCCAACGT+TGG | + | chr3.3:68934648-68934667 | MS.gene044295:intron | 55.0% | |
| CAAGTCGAACGAGGCGGTAT+AGG | + | chr3.3:68936644-68936663 | MS.gene044295:intron | 55.0% | |
| CATCCCAACGAACCTCGCAT+AGG | - | chr3.3:68932269-68932288 | None:intergenic | 55.0% | |
| CCTCAACCAACGCCACTACA+TGG | - | chr3.3:68934401-68934420 | None:intergenic | 55.0% | |
| CGATATCCTCCATGCCACCA+TGG | - | chr3.3:68934432-68934451 | None:intergenic | 55.0% | |
| CGATGCATTTCCTCGCACAG+AGG | + | chr3.3:68930666-68930685 | MS.gene044295:CDS | 55.0% | |
| CGCCACTACATGGCAGAACT+TGG | - | chr3.3:68934391-68934410 | None:intergenic | 55.0% | |
| GGAGGGGAGCTAAAGTTGAG+AGG | + | chr3.3:68934727-68934746 | MS.gene044295:intron | 55.0% | |
| GTTCTGCCATGTAGTGGCGT+TGG | + | chr3.3:68934392-68934411 | MS.gene044295:intron | 55.0% | |
| GTTGTCTGGATGCCTAGCAG+AGG | + | chr3.3:68934551-68934570 | MS.gene044295:intron | 55.0% | |
| TAGAGGCTACCCAACGTTGG+TGG | + | chr3.3:68934651-68934670 | MS.gene044295:intron | 55.0% | |
| TGGTTGAGGATGCCAGACCA+TGG | + | chr3.3:68934412-68934431 | MS.gene044295:intron | 55.0% | |
| TTGAGGATGCCAGACCATGG+TGG | + | chr3.3:68934415-68934434 | MS.gene044295:intron | 55.0% | |
| TTGATCGGACATGGCCAGGT+TGG | + | chr3.3:68936170-68936189 | MS.gene044295:intron | 55.0% | |
| ! | GAGCATGGTGTCAATGACGG+AGG | + | chr3.3:68934473-68934492 | MS.gene044295:intron | 55.0% |
| ! | GTGTCAATGACGGAGGGCAT+GGG | + | chr3.3:68934480-68934499 | MS.gene044295:intron | 55.0% |
| ! | TGCCGGTGCTAACCATCACA+AGG | - | chr3.3:68931703-68931722 | None:intergenic | 55.0% |
| !! | CCATGTAGTGGCGTTGGTTG+AGG | + | chr3.3:68934398-68934417 | MS.gene044295:intron | 55.0% |
| ACCTAGCACGGCACAAAGCC+GGG | - | chr3.3:68936362-68936381 | None:intergenic | 60.0% | |
| AGCTCCCCTCCAACATTGGG+AGG | - | chr3.3:68934718-68934737 | None:intergenic | 60.0% | |
| CAACAGGCATGCTGGACCGT+TGG | + | chr3.3:68936922-68936941 | MS.gene044295:intron | 60.0% | |
| CACCTAGCACGGCACAAAGC+CGG | - | chr3.3:68936363-68936382 | None:intergenic | 60.0% | |
| CGTCGACAAGTCGAACGAGG+CGG | + | chr3.3:68936638-68936657 | MS.gene044295:intron | 60.0% | |
| GAGTTCTCGGCAGTGGAGAG+TGG | + | chr3.3:68934614-68934633 | MS.gene044295:intron | 60.0% | |
| GATGCCAGACCATGGTGGCA+TGG | + | chr3.3:68934420-68934439 | MS.gene044295:intron | 60.0% | |
| GCTCCCCTCCAACATTGGGA+GGG | - | chr3.3:68934717-68934736 | None:intergenic | 60.0% | |
| GGATGCCTAGCAGAGGCAGT+GGG | + | chr3.3:68934558-68934577 | MS.gene044295:intron | 60.0% | |
| TAGCAGAGGCAGTGGGTGTC+AGG | + | chr3.3:68934565-68934584 | MS.gene044295:intron | 60.0% | |
| TCCTCCATGCCACCATGGTC+TGG | - | chr3.3:68934427-68934446 | None:intergenic | 60.0% | |
| TGACACCCACTGCCTCTGCT+AGG | - | chr3.3:68934566-68934585 | None:intergenic | 60.0% | |
| TGGATGCCTAGCAGAGGCAG+TGG | + | chr3.3:68934557-68934576 | MS.gene044295:intron | 60.0% | |
| ! | GGTGTCAATGACGGAGGGCA+TGG | + | chr3.3:68934479-68934498 | MS.gene044295:intron | 60.0% |
| !! | CTACCCAACGTTGGTGGCAG+TGG | + | chr3.3:68934657-68934676 | MS.gene044295:intron | 60.0% |
| AGGCAGTGGGTGTCAGGTGC+TGG | + | chr3.3:68934571-68934590 | MS.gene044295:intron | 65.0% | |
| GCCAGACCATGGTGGCATGG+AGG | + | chr3.3:68934423-68934442 | MS.gene044295:intron | 65.0% | |
| GGGTGCCAGCCAGACAGTGA+TGG | + | chr3.3:68934522-68934541 | MS.gene044295:intron | 65.0% | |
| ! | ACCCGGCTTTGTGCCGTGCT+AGG | + | chr3.3:68936358-68936377 | MS.gene044295:CDS | 65.0% |
| ! | CGGCTTTGTGCCGTGCTAGG+TGG | + | chr3.3:68936361-68936380 | MS.gene044295:CDS | 65.0% |
| !! | GTGTCAGGTGCTGGCAGTGG+TGG | + | chr3.3:68934580-68934599 | MS.gene044295:intron | 65.0% |
| !! | TGGGTGTCAGGTGCTGGCAG+TGG | + | chr3.3:68934577-68934596 | MS.gene044295:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 68930637 | 68936992 | 68930637 | ID=MS.gene044295 |
| chr3.3 | mRNA | 68930637 | 68936992 | 68930637 | ID=MS.gene044295.t1;Parent=MS.gene044295 |
| chr3.3 | exon | 68930637 | 68930724 | 68930637 | ID=MS.gene044295.t1.exon1;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68930637 | 68930724 | 68930637 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68930851 | 68930933 | 68930851 | ID=MS.gene044295.t1.exon2;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68930851 | 68930933 | 68930851 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68931634 | 68931709 | 68931634 | ID=MS.gene044295.t1.exon3;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68931634 | 68931709 | 68931634 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68931840 | 68931907 | 68931840 | ID=MS.gene044295.t1.exon4;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68931840 | 68931907 | 68931840 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68933311 | 68933407 | 68933311 | ID=MS.gene044295.t1.exon5;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68933311 | 68933407 | 68933311 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68935128 | 68935249 | 68935128 | ID=MS.gene044295.t1.exon6;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68935128 | 68935249 | 68935128 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68935343 | 68935426 | 68935343 | ID=MS.gene044295.t1.exon7;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68935343 | 68935426 | 68935343 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68935851 | 68935997 | 68935851 | ID=MS.gene044295.t1.exon8;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68935851 | 68935997 | 68935851 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68936076 | 68936187 | 68936076 | ID=MS.gene044295.t1.exon9;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68936076 | 68936187 | 68936076 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68936281 | 68936400 | 68936281 | ID=MS.gene044295.t1.exon10;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68936281 | 68936400 | 68936281 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| chr3.3 | exon | 68936928 | 68936992 | 68936928 | ID=MS.gene044295.t1.exon11;Parent=MS.gene044295.t1 |
| chr3.3 | CDS | 68936928 | 68936992 | 68936928 | ID=cds.MS.gene044295.t1;Parent=MS.gene044295.t1 |
| Gene Sequence |
| Protein sequence |
