Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044749.t1 | XP_013455753.1 | 96.4 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 2.10E-201 | 711.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044749.t1 | Q54NS9 | 32.0 | 375 | 227 | 7 | 2 | 349 | 23 | 396 | 2.9e-42 | 174.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044749.t1 | A0A072UJ57 | 96.4 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 1.5e-201 | 711.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044749 | MS.gene66676 | PPI |
| MS.gene98633 | MS.gene044749 | PPI |
| MS.gene044749 | MS.gene73640 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044749.t1 | MTR_4g051645 | 96.419 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 0.0 | 729 |
| MS.gene044749.t1 | MTR_4g051622 | 68.539 | 356 | 110 | 2 | 6 | 360 | 3 | 357 | 0.0 | 509 |
| MS.gene044749.t1 | MTR_2g061440 | 80.000 | 70 | 14 | 0 | 141 | 210 | 193 | 262 | 7.74e-27 | 112 |
| MS.gene044749.t1 | MTR_4g045993 | 25.610 | 328 | 173 | 12 | 7 | 272 | 48 | 366 | 9.79e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044749.t1 | AT3G44190 | 66.292 | 356 | 119 | 1 | 7 | 362 | 12 | 366 | 1.59e-177 | 497 |
| MS.gene044749.t1 | AT5G22140 | 67.887 | 355 | 113 | 1 | 7 | 361 | 12 | 365 | 2.59e-177 | 497 |
| MS.gene044749.t1 | AT3G44190 | 65.495 | 313 | 107 | 1 | 50 | 362 | 1 | 312 | 2.00e-152 | 432 |
| MS.gene044749.t1 | AT5G22140 | 66.346 | 312 | 104 | 1 | 50 | 361 | 1 | 311 | 9.79e-151 | 427 |
| MS.gene044749.t1 | AT5G08740 | 26.463 | 393 | 221 | 15 | 8 | 336 | 82 | 470 | 7.20e-13 | 70.1 |
Find 86 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTTTCACTCCTAATTT+TGG | 0.072580 | 4.4:-50901720 | None:intergenic |
| GGAAATCAAGCAAGGGATTT+TGG | 0.165908 | 4.4:+50903751 | MS.gene044749:intron |
| CAGACCCTGTACCCAAAATT+AGG | 0.314387 | 4.4:+50901708 | MS.gene044749:CDS |
| ATTCAAGTTTCTACAATATG+AGG | 0.339522 | 4.4:-50904004 | None:intergenic |
| GCTCGTTCCATTCTGATTGT+TGG | 0.351633 | 4.4:+50902592 | MS.gene044749:CDS |
| ATCATAGGTGGTGGTATTGC+TGG | 0.353406 | 4.4:+50899884 | MS.gene044749:CDS |
| GATAGTCATATGCAATCTTT+TGG | 0.353835 | 4.4:-50901664 | None:intergenic |
| ACGATAAGTGGAAGAATTCC+TGG | 0.370478 | 4.4:+50903923 | MS.gene044749:CDS |
| CTGCTGATAAGACTCTAAAA+TGG | 0.374188 | 4.4:+50902728 | MS.gene044749:CDS |
| TAGATGAAAACTTGAGAGTC+AGG | 0.392349 | 4.4:+50902959 | MS.gene044749:CDS |
| AACAAAATCTATCGAACTTC+AGG | 0.412309 | 4.4:+50902820 | MS.gene044749:CDS |
| TGGAGATATTACAAACATTC+CGG | 0.415600 | 4.4:+50903005 | MS.gene044749:CDS |
| GAATTCTTCCACTTATCGTT+AGG | 0.425584 | 4.4:-50903919 | None:intergenic |
| CGTTCCATTCTGATTGTTGG+AGG | 0.439915 | 4.4:+50902595 | MS.gene044749:CDS |
| AGATTACATGGGCAAGTTTG+AGG | 0.445110 | 4.4:+50901516 | MS.gene044749:CDS |
| TGGTAGAACAAGAAAACAAA+TGG | 0.450303 | 4.4:+50903973 | MS.gene044749:CDS |
| ATTGTTGGAGGAGGTCCTAC+TGG | 0.453795 | 4.4:+50902607 | MS.gene044749:CDS |
| CCTACTGGTGTAGAACTTGC+TGG | 0.457077 | 4.4:+50902622 | MS.gene044749:CDS |
| ATTCCTGGCTACATCAAGTC+TGG | 0.458214 | 4.4:+50903938 | MS.gene044749:CDS |
| ATACAAACCACATTCGGTAT+TGG | 0.458786 | 4.4:+50903850 | MS.gene044749:CDS |
| TTGTGCACGGGAAAACCATT+TGG | 0.461944 | 4.4:+50902874 | MS.gene044749:CDS |
| AAGTCTGGAGATTTGTTTGT+TGG | 0.464199 | 4.4:+50903953 | MS.gene044749:CDS |
| TTGAGGGAGGTAAAGAATGT+TGG | 0.465885 | 4.4:+50903819 | MS.gene044749:CDS |
| TTCCGTCACATTAACAGCAC+TGG | 0.472573 | 4.4:-50901618 | None:intergenic |
| GACTATCTTGTTATTGCCAC+TGG | 0.472612 | 4.4:+50901680 | MS.gene044749:CDS |
| CACTGTTTAAGTCGACTGCT+TGG | 0.476065 | 4.4:-50902783 | None:intergenic |
| CCAAGGCTGTTGGAATTCAT+AGG | 0.479557 | 4.4:+50902697 | MS.gene044749:CDS |
| CATAGAGAGTACTTCACAAA+AGG | 0.482459 | 4.4:+50901581 | MS.gene044749:CDS |
| ATGGGCAAGTTTGAGGTCAA+TGG | 0.483082 | 4.4:+50901523 | MS.gene044749:CDS |
| TTGCCATTCCTAACGATAAG+TGG | 0.487177 | 4.4:+50903911 | MS.gene044749:CDS |
| GAAGAGCGAGTTGTTATCAT+AGG | 0.489090 | 4.4:+50899869 | MS.gene044749:CDS |
| GGTAGAACAAGAAAACAAAT+GGG | 0.492449 | 4.4:+50903974 | MS.gene044749:CDS |
| ACCAGTGTAACCTTCTTATC+CGG | 0.492762 | 4.4:-50902664 | None:intergenic |
| TCCATTCTGATTGTTGGAGG+AGG | 0.499427 | 4.4:+50902598 | MS.gene044749:CDS |
| CTTCCACTTATCGTTAGGAA+TGG | 0.501735 | 4.4:-50903914 | None:intergenic |
| TCTCCAGACTTGATGTAGCC+AGG | 0.507193 | 4.4:-50903941 | None:intergenic |
| AGGGAGGTAAAGAATGTTGG+AGG | 0.511205 | 4.4:+50903822 | MS.gene044749:CDS |
| TATCAATGTCCTTTCTGCAA+AGG | 0.514570 | 4.4:-50901555 | None:intergenic |
| AACTTGCGGATGATGATTGA+GGG | 0.520998 | 4.4:+50903803 | MS.gene044749:CDS |
| GCCGTCTGCAGTCAATACTT+CGG | 0.521568 | 4.4:-50901642 | None:intergenic |
| GGCACAGAAGCAGGCAGAAG+TGG | 0.522122 | 4.4:+50903772 | MS.gene044749:CDS |
| TTAAGCCATGACGAACCAAA+TGG | 0.523343 | 4.4:-50902889 | None:intergenic |
| AGATTGTCATTTCTTGTGCA+CGG | 0.527578 | 4.4:+50902861 | MS.gene044749:CDS |
| GATTGTCATTTCTTGTGCAC+GGG | 0.534440 | 4.4:+50902862 | MS.gene044749:CDS |
| GGAAACATACAAACCACATT+CGG | 0.534598 | 4.4:+50903844 | MS.gene044749:CDS |
| GCACAAAGGACCAAGGCTGT+TGG | 0.547803 | 4.4:+50902687 | MS.gene044749:CDS |
| CCTATGAATTCCAACAGCCT+TGG | 0.554290 | 4.4:-50902697 | None:intergenic |
| GAAAACCATTTGGTTCGTCA+TGG | 0.555238 | 4.4:+50902884 | MS.gene044749:CDS |
| ACTATTGCCAATACCGAATG+TGG | 0.556477 | 4.4:-50903857 | None:intergenic |
| ACCTCCTCCAACAATCAGAA+TGG | 0.560963 | 4.4:-50902599 | None:intergenic |
| AATGTCCTTTCTGCAAAGGA+TGG | 0.563728 | 4.4:-50901551 | None:intergenic |
| GAAATGACAATCTGCTTCGA+TGG | 0.564040 | 4.4:-50902851 | None:intergenic |
| TGGCAATAGTTTCACTTGGG+AGG | 0.566676 | 4.4:+50903870 | MS.gene044749:CDS |
| TTCAAGTTTCTACAATATGA+GGG | 0.567555 | 4.4:-50904003 | None:intergenic |
| GAACTTGCGGATGATGATTG+AGG | 0.567619 | 4.4:+50903802 | MS.gene044749:CDS |
| GGATGTTCAGGGGATGATCA+AGG | 0.567739 | 4.4:+50902936 | MS.gene044749:CDS |
| CGAGTTGTTATCATAGGTGG+TGG | 0.569292 | 4.4:+50899875 | MS.gene044749:CDS |
| TGGAACCATCCTTTGCAGAA+AGG | 0.578477 | 4.4:+50901546 | MS.gene044749:CDS |
| AAAATCTATCGAACTTCAGG+AGG | 0.584727 | 4.4:+50902823 | MS.gene044749:CDS |
| ACCGAAGTATTGACTGCAGA+CGG | 0.586673 | 4.4:+50901641 | MS.gene044749:CDS |
| TCCGGATAAGAAGGTTACAC+TGG | 0.588992 | 4.4:+50902663 | MS.gene044749:CDS |
| GTATTGGCAATAGTTTCACT+TGG | 0.592229 | 4.4:+50903866 | MS.gene044749:CDS |
| GAGCGAGTTGTTATCATAGG+TGG | 0.596638 | 4.4:+50899872 | MS.gene044749:CDS |
| AGATGAAAACTTGAGAGTCA+GGG | 0.597572 | 4.4:+50902960 | MS.gene044749:CDS |
| TACAGGGTCTGCATGGCCAG+TGG | 0.598096 | 4.4:-50901696 | None:intergenic |
| ATACAACAGGAAATCAAGCA+AGG | 0.599408 | 4.4:+50903743 | MS.gene044749:intron |
| GACTTAAACAGTGACACAGA+TGG | 0.600678 | 4.4:+50902793 | MS.gene044749:CDS |
| ATCCAGTGCTGTTAATGTGA+CGG | 0.604022 | 4.4:+50901616 | MS.gene044749:CDS |
| TATTGGCAATAGTTTCACTT+GGG | 0.604816 | 4.4:+50903867 | MS.gene044749:CDS |
| GGCAAGTTTGAGGTCAATGG+TGG | 0.607275 | 4.4:+50901526 | MS.gene044749:CDS |
| TACAACAGGAAATCAAGCAA+GGG | 0.616631 | 4.4:+50903744 | MS.gene044749:intron |
| AAATCTATCGAACTTCAGGA+GGG | 0.621050 | 4.4:+50902824 | MS.gene044749:CDS |
| CCAGCAAGTTCTACACCAGT+AGG | 0.629097 | 4.4:-50902622 | None:intergenic |
| AAAACTTGAGAGTCAGGGGT+CGG | 0.629348 | 4.4:+50902965 | MS.gene044749:CDS |
| AATCTATCGAACTTCAGGAG+GGG | 0.640518 | 4.4:+50902825 | MS.gene044749:CDS |
| GTTGAAATCTAAGAATGTTG+AGG | 0.652877 | 4.4:+50902750 | MS.gene044749:CDS |
| CACTGGTGCACAAAGGACCA+AGG | 0.656142 | 4.4:+50902680 | MS.gene044749:CDS |
| GGGAGGTAAAGAATGTTGGA+GGG | 0.657144 | 4.4:+50903823 | MS.gene044749:CDS |
| TAACAGCACTGGATGTAACA+AGG | 0.659638 | 4.4:-50901607 | None:intergenic |
| AAGTGGTTGTGAAGAACTTG+CGG | 0.660896 | 4.4:+50903789 | MS.gene044749:CDS |
| AGAATAATTACGGATCAATG+AGG | 0.662291 | 4.4:-50899949 | None:intergenic |
| GATGAAAACTTGAGAGTCAG+GGG | 0.673851 | 4.4:+50902961 | MS.gene044749:CDS |
| AAGGTTACACTGGTGCACAA+AGG | 0.685956 | 4.4:+50902673 | MS.gene044749:CDS |
| GTAGAACAAGAAAACAAATG+GGG | 0.698957 | 4.4:+50903975 | MS.gene044749:CDS |
| TTGCGGATGATGATTGAGGG+AGG | 0.701459 | 4.4:+50903806 | MS.gene044749:CDS |
| AAAATGACTTGGATGTTCAG+GGG | 0.703696 | 4.4:+50902926 | MS.gene044749:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGATTCATTTTAATTTTTA+TGG | + | chr4.4:50902492-50902511 | MS.gene044749:intron | 10.0% |
| !! | AATATTTAGATAATAAAGCA+TGG | - | chr4.4:50903413-50903432 | None:intergenic | 15.0% |
| !! | AGAATTCATCAATATAAAAA+AGG | + | chr4.4:50901737-50901756 | MS.gene044749:CDS | 15.0% |
| !! | TAAAGAAGAAAGAATAATTA+CGG | - | chr4.4:50899962-50899981 | None:intergenic | 15.0% |
| !! | TATAGTATTCGTTAAATAAT+AGG | + | chr4.4:50902325-50902344 | MS.gene044749:intron | 15.0% |
| !! | TATCTATTAACATAAACATT+TGG | + | chr4.4:50900797-50900816 | MS.gene044749:intron | 15.0% |
| !! | TATGTGATAAATACTTATAA+GGG | + | chr4.4:50900339-50900358 | MS.gene044749:intron | 15.0% |
| !! | TTATGTGATAAATACTTATA+AGG | + | chr4.4:50900338-50900357 | MS.gene044749:intron | 15.0% |
| !! | TTTGTATAACCATAATAAAA+AGG | - | chr4.4:50901286-50901305 | None:intergenic | 15.0% |
| !!! | AAAATTGAAACTTTTAAAAC+TGG | - | chr4.4:50900056-50900075 | None:intergenic | 15.0% |
| !!! | AAATTGAAACTTTTAAAACT+GGG | - | chr4.4:50900055-50900074 | None:intergenic | 15.0% |
| !!! | ACATAAGTACTTATTTTTAA+TGG | - | chr4.4:50900324-50900343 | None:intergenic | 15.0% |
| !!! | ATGTTTTAACCTTTTTATTA+TGG | + | chr4.4:50901274-50901293 | MS.gene044749:intron | 15.0% |
| !!! | CATAAGTACTTATTTTTAAT+GGG | - | chr4.4:50900323-50900342 | None:intergenic | 15.0% |
| !!! | CTTTAATTTTCTGAAAATTT+AGG | - | chr4.4:50901314-50901333 | None:intergenic | 15.0% |
| !!! | TTTTAAAAGTTTCAATTTTG+AGG | + | chr4.4:50900057-50900076 | MS.gene044749:intron | 15.0% |
| !! | AATAACCAATACAATAACAA+GGG | - | chr4.4:50900388-50900407 | None:intergenic | 20.0% |
| !! | ATAATATCATAAACACTGAA+AGG | - | chr4.4:50901872-50901891 | None:intergenic | 20.0% |
| !! | ATTAATGTAAAATGAATGAG+AGG | + | chr4.4:50903469-50903488 | MS.gene044749:intron | 20.0% |
| !! | ATTTGAACTTATAAGTACTT+TGG | + | chr4.4:50900123-50900142 | MS.gene044749:intron | 20.0% |
| !! | TAAAGAGATTAAAATGCAAT+AGG | - | chr4.4:50903687-50903706 | None:intergenic | 20.0% |
| !! | TAATAACCAATACAATAACA+AGG | - | chr4.4:50900389-50900408 | None:intergenic | 20.0% |
| !! | TACATTAATATCTTCATCAT+TGG | - | chr4.4:50903458-50903477 | None:intergenic | 20.0% |
| !! | TCAAATACGTCAATATAAAT+AGG | + | chr4.4:50903332-50903351 | MS.gene044749:intron | 20.0% |
| !!! | AAAAGTGTTTTTATGCATTA+AGG | + | chr4.4:50900083-50900102 | MS.gene044749:intron | 20.0% |
| !!! | AAATTAGTCTCAGTTATTTT+GGG | - | chr4.4:50902391-50902410 | None:intergenic | 20.0% |
| !!! | CTTTTTAGCTTATTTGTAAA+CGG | + | chr4.4:50900194-50900213 | MS.gene044749:intron | 20.0% |
| !!! | TTTTCAGAAAATTAAAGTCA+TGG | + | chr4.4:50901317-50901336 | MS.gene044749:intron | 20.0% |
| ! | AAAATGCAATAGGTTTATAG+CGG | - | chr4.4:50903677-50903696 | None:intergenic | 25.0% |
| ! | AAATTCCAATTAGACATGAA+AGG | - | chr4.4:50900520-50900539 | None:intergenic | 25.0% |
| ! | AAGATTCCAAAAACACAAAA+GGG | - | chr4.4:50900014-50900033 | None:intergenic | 25.0% |
| ! | GGATTCAATTGAATTCAATA+AGG | - | chr4.4:50901480-50901499 | None:intergenic | 25.0% |
| ! | TAAGATTCCAAAAACACAAA+AGG | - | chr4.4:50900015-50900034 | None:intergenic | 25.0% |
| ! | TAGTACAAAGTGATGTAAAA+TGG | - | chr4.4:50902093-50902112 | None:intergenic | 25.0% |
| ! | TATTGAATTCAATTGAATCC+AGG | + | chr4.4:50901480-50901499 | MS.gene044749:intron | 25.0% |
| ! | TCAAACATAGCTTATGAAAA+TGG | - | chr4.4:50901149-50901168 | None:intergenic | 25.0% |
| !! | AATTCTTTCACTCCTAATTT+TGG | - | chr4.4:50901723-50901742 | None:intergenic | 25.0% |
| !! | ATTCTTTCACTCCTAATTTT+GGG | - | chr4.4:50901722-50901741 | None:intergenic | 25.0% |
| !! | GTGTATTGTGAATGATTTTA+TGG | + | chr4.4:50902467-50902486 | MS.gene044749:intron | 25.0% |
| !!! | AAGTGTGTTTTTTTTGGAAT+TGG | + | chr4.4:50900620-50900639 | MS.gene044749:intron | 25.0% |
| !!! | AAGTTGTTTTCATAAGCTTT+CGG | - | chr4.4:50900165-50900184 | None:intergenic | 25.0% |
| !!! | AGGAATATTTTGAGATTACA+TGG | + | chr4.4:50901504-50901523 | MS.gene044749:CDS | 25.0% |
| !!! | CAAATTAGTCTCAGTTATTT+TGG | - | chr4.4:50902392-50902411 | None:intergenic | 25.0% |
| !!! | GCTATTTCTTTAACAAAAGA+TGG | - | chr4.4:50901223-50901242 | None:intergenic | 25.0% |
| !!! | GGAATATTTTGAGATTACAT+GGG | + | chr4.4:50901505-50901524 | MS.gene044749:CDS | 25.0% |
| !!! | GTTGAAAAGTGTGTTTTTTT+TGG | + | chr4.4:50900614-50900633 | MS.gene044749:intron | 25.0% |
| !!! | GTTTTCAAGTTTCAATTTTG+AGG | + | chr4.4:50900592-50900611 | MS.gene044749:intron | 25.0% |
| !!! | TGAACATATGTTTGTTTTGA+CGG | + | chr4.4:50901924-50901943 | MS.gene044749:intron | 25.0% |
| !!! | TGTATTGGTTATTATTGAAG+TGG | + | chr4.4:50900395-50900414 | MS.gene044749:intron | 25.0% |
| AAAAGCCTATATTGTTTGGT+TGG | + | chr4.4:50900250-50900269 | MS.gene044749:intron | 30.0% | |
| AACAAAATCTATCGAACTTC+AGG | + | chr4.4:50902820-50902839 | MS.gene044749:CDS | 30.0% | |
| AACAGTTTCAAGGATCTATT+TGG | - | chr4.4:50901093-50901112 | None:intergenic | 30.0% | |
| AACTGTGTTGAAAAATGACT+TGG | + | chr4.4:50902915-50902934 | MS.gene044749:CDS | 30.0% | |
| AATAGATCCTTGAAACTGTT+TGG | + | chr4.4:50901093-50901112 | MS.gene044749:intron | 30.0% | |
| AATCTCAAAATATTCCTTCC+TGG | - | chr4.4:50901501-50901520 | None:intergenic | 30.0% | |
| AGAATAATTACGGATCAATG+AGG | - | chr4.4:50899952-50899971 | None:intergenic | 30.0% | |
| AGTAAGTTGTTTATCCAAAC+AGG | - | chr4.4:50900825-50900844 | None:intergenic | 30.0% | |
| ATGCAAACACTAAAATCAGT+AGG | - | chr4.4:50903590-50903609 | None:intergenic | 30.0% | |
| CCATTAAGAAATAAACCATC+AGG | - | chr4.4:50903717-50903736 | None:intergenic | 30.0% | |
| CTTCAATGTAAATGTATGGT+GGG | - | chr4.4:50901960-50901979 | None:intergenic | 30.0% | |
| GATTCATTTCATACCATGTA+AGG | - | chr4.4:50902301-50902320 | None:intergenic | 30.0% | |
| GGTAGAACAAGAAAACAAAT+GGG | + | chr4.4:50903974-50903993 | MS.gene044749:CDS | 30.0% | |
| GTAAGTTGTTTATCCAAACA+GGG | - | chr4.4:50900824-50900843 | None:intergenic | 30.0% | |
| GTAGAACAAGAAAACAAATG+GGG | + | chr4.4:50903975-50903994 | MS.gene044749:CDS | 30.0% | |
| GTATGTAATCACAAGTGTTA+GGG | + | chr4.4:50901339-50901358 | MS.gene044749:intron | 30.0% | |
| GTTGAAATCTAAGAATGTTG+AGG | + | chr4.4:50902750-50902769 | MS.gene044749:CDS | 30.0% | |
| TATTGGCAATAGTTTCACTT+GGG | + | chr4.4:50903867-50903886 | MS.gene044749:CDS | 30.0% | |
| TGACAAAAGCCTATATTGTT+TGG | + | chr4.4:50900246-50900265 | MS.gene044749:intron | 30.0% | |
| TGGAGATATTACAAACATTC+CGG | + | chr4.4:50903005-50903024 | MS.gene044749:CDS | 30.0% | |
| TGGTAGAACAAGAAAACAAA+TGG | + | chr4.4:50903973-50903992 | MS.gene044749:CDS | 30.0% | |
| TTTCAAGGATCTATTTGGAT+TGG | - | chr4.4:50901088-50901107 | None:intergenic | 30.0% | |
| ! | AAAAATGACTTGGATGTTCA+GGG | + | chr4.4:50902925-50902944 | MS.gene044749:CDS | 30.0% |
| ! | ACTGTTTTCATAAGCTATCT+TGG | + | chr4.4:50903241-50903260 | MS.gene044749:intron | 30.0% |
| ! | ATAAGTATTGTGAGACTGTT+TGG | - | chr4.4:50901041-50901060 | None:intergenic | 30.0% |
| ! | CCTGATGGTTTATTTCTTAA+TGG | + | chr4.4:50903714-50903733 | MS.gene044749:intron | 30.0% |
| ! | GAAGAAACTCAAGTATTGTT+TGG | - | chr4.4:50902232-50902251 | None:intergenic | 30.0% |
| ! | GATAGTCATATGCAATCTTT+TGG | - | chr4.4:50901667-50901686 | None:intergenic | 30.0% |
| ! | GATATACCCTTTTGTGTTTT+TGG | + | chr4.4:50900005-50900024 | MS.gene044749:intron | 30.0% |
| ! | GTCTTTTTGGATTGAGTTAT+TGG | + | chr4.4:50900770-50900789 | MS.gene044749:intron | 30.0% |
| ! | TAAGTATTGTGAGACTGTTT+GGG | - | chr4.4:50901040-50901059 | None:intergenic | 30.0% |
| !! | AATCTTTAAAGTTCACTGCA+AGG | + | chr4.4:50902271-50902290 | MS.gene044749:intron | 30.0% |
| !! | TTAATGGACTTCAATACAAC+AGG | + | chr4.4:50903730-50903749 | MS.gene044749:intron | 30.0% |
| !!! | TAGTTAGTTTTCCATGCATA+TGG | + | chr4.4:50901422-50901441 | MS.gene044749:intron | 30.0% |
| AAAATCTATCGAACTTCAGG+AGG | + | chr4.4:50902823-50902842 | MS.gene044749:CDS | 35.0% | |
| AAACACTTGTGAGACTGTTT+GGG | - | chr4.4:50903296-50903315 | None:intergenic | 35.0% | |
| AAACTGTTTGGAAGAGGTTA+TGG | + | chr4.4:50901105-50901124 | MS.gene044749:intron | 35.0% | |
| AAATCTATCGAACTTCAGGA+GGG | + | chr4.4:50902824-50902843 | MS.gene044749:CDS | 35.0% | |
| AATTGCTTAGCCAATCTTTG+AGG | + | chr4.4:50901892-50901911 | MS.gene044749:intron | 35.0% | |
| AGACAACCAAACACACAATT+AGG | - | chr4.4:50900295-50900314 | None:intergenic | 35.0% | |
| AGATGAAAACTTGAGAGTCA+GGG | + | chr4.4:50902960-50902979 | MS.gene044749:CDS | 35.0% | |
| AGTCTACTATCCTCAAAGAT+TGG | - | chr4.4:50901905-50901924 | None:intergenic | 35.0% | |
| ATAAACATTTGGACCCTGTT+TGG | + | chr4.4:50900808-50900827 | MS.gene044749:intron | 35.0% | |
| ATACAACAGGAAATCAAGCA+AGG | + | chr4.4:50903743-50903762 | MS.gene044749:intron | 35.0% | |
| ATGATACCAAGAATGCAGAA+GGG | - | chr4.4:50900549-50900568 | None:intergenic | 35.0% | |
| ATTGTGTGTTTGGTTGTCTA+CGG | + | chr4.4:50900296-50900315 | MS.gene044749:intron | 35.0% | |
| CAATGAGGAACACACATAAT+TGG | - | chr4.4:50903377-50903396 | None:intergenic | 35.0% | |
| CACGGATAGTAAAAAAACAG+TGG | + | chr4.4:50902019-50902038 | MS.gene044749:intron | 35.0% | |
| CATGTAATGTGGAACAATAG+AGG | + | chr4.4:50902116-50902135 | MS.gene044749:intron | 35.0% | |
| CATTTCATACCATGTAAGGA+AGG | - | chr4.4:50902297-50902316 | None:intergenic | 35.0% | |
| CTCTATTGTTCCACATTACA+TGG | - | chr4.4:50902118-50902137 | None:intergenic | 35.0% | |
| GAATTCAATTGAATCCAGGA+AGG | + | chr4.4:50901484-50901503 | MS.gene044749:intron | 35.0% | |
| GAATTCTTCCACTTATCGTT+AGG | - | chr4.4:50903922-50903941 | None:intergenic | 35.0% | |
| GAGAACCTTTCATGTCTAAT+TGG | + | chr4.4:50900512-50900531 | MS.gene044749:intron | 35.0% | |
| GCTTCAATGTAAATGTATGG+TGG | - | chr4.4:50901961-50901980 | None:intergenic | 35.0% | |
| GGAGCTTCAATGTAAATGTA+TGG | - | chr4.4:50901964-50901983 | None:intergenic | 35.0% | |
| GGTATGTAATCACAAGTGTT+AGG | + | chr4.4:50901338-50901357 | MS.gene044749:intron | 35.0% | |
| GTAGTCCAACCAAACAATAT+AGG | - | chr4.4:50900258-50900277 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | - | chr4.4:50903297-50903316 | None:intergenic | 35.0% | |
| TACAACAGGAAATCAAGCAA+GGG | + | chr4.4:50903744-50903763 | MS.gene044749:intron | 35.0% | |
| TACAATAACAAGGGTCTGTT+TGG | - | chr4.4:50900379-50900398 | None:intergenic | 35.0% | |
| TAGATGAAAACTTGAGAGTC+AGG | + | chr4.4:50902959-50902978 | MS.gene044749:CDS | 35.0% | |
| TATCAATGTCCTTTCTGCAA+AGG | - | chr4.4:50901558-50901577 | None:intergenic | 35.0% | |
| TTCTTCCTTTGAACTCATGT+AGG | + | chr4.4:50902246-50902265 | MS.gene044749:intron | 35.0% | |
| TTGTACTACACCATGTAATG+TGG | + | chr4.4:50902105-50902124 | MS.gene044749:intron | 35.0% | |
| TTTGGTTGGACTACTTAATC+CGG | + | chr4.4:50900264-50900283 | MS.gene044749:intron | 35.0% | |
| ! | AAAATGACTTGGATGTTCAG+GGG | + | chr4.4:50902926-50902945 | MS.gene044749:CDS | 35.0% |
| ! | AAGTCTGGAGATTTGTTTGT+TGG | + | chr4.4:50903953-50903972 | MS.gene044749:CDS | 35.0% |
| ! | AGATTGTCATTTCTTGTGCA+CGG | + | chr4.4:50902861-50902880 | MS.gene044749:CDS | 35.0% |
| ! | ATGAAAGGTTCTCTTGCTAT+GGG | - | chr4.4:50900505-50900524 | None:intergenic | 35.0% |
| ! | ATGAGAGGTACAATATGTAC+TGG | + | chr4.4:50903484-50903503 | MS.gene044749:intron | 35.0% |
| ! | ATTAGCCTACATGAGTTCAA+AGG | - | chr4.4:50902254-50902273 | None:intergenic | 35.0% |
| ! | CTGCTGATAAGACTCTAAAA+TGG | + | chr4.4:50902728-50902747 | MS.gene044749:CDS | 35.0% |
| ! | GAAAAATGACTTGGATGTTC+AGG | + | chr4.4:50902924-50902943 | MS.gene044749:CDS | 35.0% |
| ! | GGGTTCTAATATTTCTTCCA+TGG | - | chr4.4:50902371-50902390 | None:intergenic | 35.0% |
| ! | GTATTGGCAATAGTTTCACT+TGG | + | chr4.4:50903866-50903885 | MS.gene044749:CDS | 35.0% |
| !! | ACAGACCCTTGTTATTGTAT+TGG | + | chr4.4:50900380-50900399 | MS.gene044749:intron | 35.0% |
| !! | CATAGAGAGTACTTCACAAA+AGG | + | chr4.4:50901581-50901600 | MS.gene044749:CDS | 35.0% |
| !! | CTTTTGTGAAGTACTCTCTA+TGG | - | chr4.4:50901583-50901602 | None:intergenic | 35.0% |
| !! | GAAAAAACAGAAGCACTTAC+CGG | - | chr4.4:50903027-50903046 | None:intergenic | 35.0% |
| !!! | AGAGATAGCTGTTGATTTTC+CGG | + | chr4.4:50902645-50902664 | MS.gene044749:CDS | 35.0% |
| !!! | TGTTGATTTTCCGGATAAGA+AGG | + | chr4.4:50902654-50902673 | MS.gene044749:CDS | 35.0% |
| AACTTGCGGATGATGATTGA+GGG | + | chr4.4:50903803-50903822 | MS.gene044749:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | chr4.4:50903252-50903271 | MS.gene044749:intron | 40.0% | |
| AAGTGGTTGTGAAGAACTTG+CGG | + | chr4.4:50903789-50903808 | MS.gene044749:CDS | 40.0% | |
| AATCTATCGAACTTCAGGAG+GGG | + | chr4.4:50902825-50902844 | MS.gene044749:CDS | 40.0% | |
| AATGTCCTTTCTGCAAAGGA+TGG | - | chr4.4:50901554-50901573 | None:intergenic | 40.0% | |
| ACACTGAAAGGCGATCATTA+TGG | - | chr4.4:50901860-50901879 | None:intergenic | 40.0% | |
| ACCAGTGTAACCTTCTTATC+CGG | - | chr4.4:50902667-50902686 | None:intergenic | 40.0% | |
| ACCTCTTCCAAACAGTTTCA+AGG | - | chr4.4:50901103-50901122 | None:intergenic | 40.0% | |
| ACGATAAGTGGAAGAATTCC+TGG | + | chr4.4:50903923-50903942 | MS.gene044749:CDS | 40.0% | |
| ACTATTGCCAATACCGAATG+TGG | - | chr4.4:50903860-50903879 | None:intergenic | 40.0% | |
| AGATTACATGGGCAAGTTTG+AGG | + | chr4.4:50901516-50901535 | MS.gene044749:CDS | 40.0% | |
| ATGAAAGGCAAGCTACTAGT+TGG | - | chr4.4:50901985-50902004 | None:intergenic | 40.0% | |
| CAACCAAACACACAATTAGG+AGG | - | chr4.4:50900292-50900311 | None:intergenic | 40.0% | |
| CATAGCACACTCAACTCAAT+AGG | + | chr4.4:50903082-50903101 | MS.gene044749:intron | 40.0% | |
| CATGAAAGGTTCTCTTGCTA+TGG | - | chr4.4:50900506-50900525 | None:intergenic | 40.0% | |
| CATGATACCAAGAATGCAGA+AGG | - | chr4.4:50900550-50900569 | None:intergenic | 40.0% | |
| CGGAGAGTCAAAGTTTACAT+AGG | - | chr4.4:50903657-50903676 | None:intergenic | 40.0% | |
| CTCAATCCAAAAAGACCTAC+TGG | - | chr4.4:50900766-50900785 | None:intergenic | 40.0% | |
| CTTCCACTTATCGTTAGGAA+TGG | - | chr4.4:50903917-50903936 | None:intergenic | 40.0% | |
| GAAATGACAATCTGCTTCGA+TGG | - | chr4.4:50902854-50902873 | None:intergenic | 40.0% | |
| GAAGAGCGAGTTGTTATCAT+AGG | + | chr4.4:50899869-50899888 | MS.gene044749:CDS | 40.0% | |
| GACTTAAACAGTGACACAGA+TGG | + | chr4.4:50902793-50902812 | MS.gene044749:CDS | 40.0% | |
| GAGTTGAGTGTGCTATGAAA+GGG | - | chr4.4:50903079-50903098 | None:intergenic | 40.0% | |
| GATGAAAACTTGAGAGTCAG+GGG | + | chr4.4:50902961-50902980 | MS.gene044749:CDS | 40.0% | |
| GATTGACAACACTGGATGAA+AGG | - | chr4.4:50902000-50902019 | None:intergenic | 40.0% | |
| GGCGATCATTATGGTATTGT+AGG | - | chr4.4:50901851-50901870 | None:intergenic | 40.0% | |
| GTGGTTACGTATACAAAGAG+TGG | - | chr4.4:50903055-50903074 | None:intergenic | 40.0% | |
| TCATCCAGTGTTGTCAATCA+CGG | + | chr4.4:50902001-50902020 | MS.gene044749:intron | 40.0% | |
| TCCATGGTGATACAAGAAGT+CGG | - | chr4.4:50902355-50902374 | None:intergenic | 40.0% | |
| TCCTTGAAACTGTTTGGAAG+AGG | + | chr4.4:50901099-50901118 | MS.gene044749:intron | 40.0% | |
| TCTCTTTACAAGCTTCCTGA+TGG | + | chr4.4:50903699-50903718 | MS.gene044749:intron | 40.0% | |
| TGATACCAAGAATGCAGAAG+GGG | - | chr4.4:50900548-50900567 | None:intergenic | 40.0% | |
| TTAAGCCATGACGAACCAAA+TGG | - | chr4.4:50902892-50902911 | None:intergenic | 40.0% | |
| TTGAGGGAGGTAAAGAATGT+TGG | + | chr4.4:50903819-50903838 | MS.gene044749:CDS | 40.0% | |
| TTGCCATTCCTAACGATAAG+TGG | + | chr4.4:50903911-50903930 | MS.gene044749:CDS | 40.0% | |
| TTGGTTGGACTACTTAATCC+GGG | + | chr4.4:50900265-50900284 | MS.gene044749:intron | 40.0% | |
| TTGTGTGTTTGGTTGTCTAC+GGG | + | chr4.4:50900297-50900316 | MS.gene044749:intron | 40.0% | |
| TTTAGTGTTTGCATTCCTCG+AGG | + | chr4.4:50903596-50903615 | MS.gene044749:intron | 40.0% | |
| TTTCTATGATGCACAGACAC+AGG | + | chr4.4:50900727-50900746 | MS.gene044749:intron | 40.0% | |
| ! | ATCCAGTGCTGTTAATGTGA+CGG | + | chr4.4:50901616-50901635 | MS.gene044749:CDS | 40.0% |
| ! | ATTGGAGCATCACAAGACTA+AGG | - | chr4.4:50903359-50903378 | None:intergenic | 40.0% |
| ! | CGGAACAACATTTTTGCAGT+TGG | + | chr4.4:50902985-50903004 | MS.gene044749:CDS | 40.0% |
| ! | GAAAACCATTTGGTTCGTCA+TGG | + | chr4.4:50902884-50902903 | MS.gene044749:CDS | 40.0% |
| ! | GAGGTACAATATGTACTGGT+TGG | + | chr4.4:50903488-50903507 | MS.gene044749:intron | 40.0% |
| ! | GATTGTCATTTCTTGTGCAC+GGG | + | chr4.4:50902862-50902881 | MS.gene044749:CDS | 40.0% |
| ! | GGAAATCAAGCAAGGGATTT+TGG | + | chr4.4:50903751-50903770 | MS.gene044749:intron | 40.0% |
| ! | GGTCTCAGTTTAGTTCAATG+AGG | - | chr4.4:50903392-50903411 | None:intergenic | 40.0% |
| ! | TAACAGCACTGGATGTAACA+AGG | - | chr4.4:50901610-50901629 | None:intergenic | 40.0% |
| ! | TGAGTTGAGTGTGCTATGAA+AGG | - | chr4.4:50903080-50903099 | None:intergenic | 40.0% |
| ! | TTGGAGCATCACAAGACTAA+GGG | - | chr4.4:50903358-50903377 | None:intergenic | 40.0% |
| !! | CACTCCTAATTTTGGGTACA+GGG | - | chr4.4:50901715-50901734 | None:intergenic | 40.0% |
| !! | GACTATCTTGTTATTGCCAC+TGG | + | chr4.4:50901680-50901699 | MS.gene044749:CDS | 40.0% |
| !! | TATGTACTGGTTGGTACTAC+AGG | + | chr4.4:50903497-50903516 | MS.gene044749:intron | 40.0% |
| !! | TCACTCCTAATTTTGGGTAC+AGG | - | chr4.4:50901716-50901735 | None:intergenic | 40.0% |
| AAAACTTGAGAGTCAGGGGT+CGG | + | chr4.4:50902965-50902984 | MS.gene044749:CDS | 45.0% | |
| AACACACAATTAGGAGGTCC+CGG | - | chr4.4:50900286-50900305 | None:intergenic | 45.0% | |
| AAGGTTACACTGGTGCACAA+AGG | + | chr4.4:50902673-50902692 | MS.gene044749:CDS | 45.0% | |
| ACCTCCTCCAACAATCAGAA+TGG | - | chr4.4:50902602-50902621 | None:intergenic | 45.0% | |
| AGGGAGGTAAAGAATGTTGG+AGG | + | chr4.4:50903822-50903841 | MS.gene044749:CDS | 45.0% | |
| AGTATAGCTTTCTGTGCACG+TGG | + | chr4.4:50900460-50900479 | MS.gene044749:intron | 45.0% | |
| ATGGTGATACAAGAAGTCGG+TGG | - | chr4.4:50902352-50902371 | None:intergenic | 45.0% | |
| ATGTGTACATAAGCACCTCG+AGG | - | chr4.4:50903614-50903633 | None:intergenic | 45.0% | |
| ATTCCTGGCTACATCAAGTC+TGG | + | chr4.4:50903938-50903957 | MS.gene044749:CDS | 45.0% | |
| CAATTCGACAGCCATATGCA+TGG | - | chr4.4:50901436-50901455 | None:intergenic | 45.0% | |
| CACTGTTTAAGTCGACTGCT+TGG | - | chr4.4:50902786-50902805 | None:intergenic | 45.0% | |
| CAGACCCTGTACCCAAAATT+AGG | + | chr4.4:50901708-50901727 | MS.gene044749:CDS | 45.0% | |
| CCAAAAAGACCTACTGGTGT+CGG | - | chr4.4:50900760-50900779 | None:intergenic | 45.0% | |
| CCAAGGCTGTTGGAATTCAT+AGG | + | chr4.4:50902697-50902716 | MS.gene044749:CDS | 45.0% | |
| CCTATGAATTCCAACAGCCT+TGG | - | chr4.4:50902700-50902719 | None:intergenic | 45.0% | |
| CGAGTTGTTATCATAGGTGG+TGG | + | chr4.4:50899875-50899894 | MS.gene044749:CDS | 45.0% | |
| CGTTCCATTCTGATTGTTGG+AGG | + | chr4.4:50902595-50902614 | MS.gene044749:CDS | 45.0% | |
| CTATCCGTGATTGACAACAC+TGG | - | chr4.4:50902008-50902027 | None:intergenic | 45.0% | |
| CTCAACTCAATAGGTTGCTC+AGG | + | chr4.4:50903091-50903110 | MS.gene044749:intron | 45.0% | |
| GAACTTGCGGATGATGATTG+AGG | + | chr4.4:50903802-50903821 | MS.gene044749:CDS | 45.0% | |
| GAGCGAGTTGTTATCATAGG+TGG | + | chr4.4:50899872-50899891 | MS.gene044749:CDS | 45.0% | |
| GCTCGTTCCATTCTGATTGT+TGG | + | chr4.4:50902592-50902611 | MS.gene044749:CDS | 45.0% | |
| GGACCTCCTAATTGTGTGTT+TGG | + | chr4.4:50900286-50900305 | MS.gene044749:intron | 45.0% | |
| GGGAGGTAAAGAATGTTGGA+GGG | + | chr4.4:50903823-50903842 | MS.gene044749:CDS | 45.0% | |
| TAGGTTGCTCAGGTCATGTT+TGG | + | chr4.4:50903101-50903120 | MS.gene044749:intron | 45.0% | |
| TCCATTCTGATTGTTGGAGG+AGG | + | chr4.4:50902598-50902617 | MS.gene044749:CDS | 45.0% | |
| TCCGGATAAGAAGGTTACAC+TGG | + | chr4.4:50902663-50902682 | MS.gene044749:CDS | 45.0% | |
| TGCACTACAATGCCACAACA+CGG | + | chr4.4:50902058-50902077 | MS.gene044749:intron | 45.0% | |
| TGGAACCATCCTTTGCAGAA+AGG | + | chr4.4:50901546-50901565 | MS.gene044749:CDS | 45.0% | |
| TGGCAATAGTTTCACTTGGG+AGG | + | chr4.4:50903870-50903889 | MS.gene044749:CDS | 45.0% | |
| TGTTTCCCCTTCTGCATTCT+TGG | + | chr4.4:50900540-50900559 | MS.gene044749:intron | 45.0% | |
| TTCCGTCACATTAACAGCAC+TGG | - | chr4.4:50901621-50901640 | None:intergenic | 45.0% | |
| TTGTGCACGGGAAAACCATT+TGG | + | chr4.4:50902874-50902893 | MS.gene044749:CDS | 45.0% | |
| ! | ACCGACTTCTTGTATCACCA+TGG | + | chr4.4:50902351-50902370 | MS.gene044749:intron | 45.0% |
| ! | AGGCTTTTGTCAGTTGAGCT+AGG | - | chr4.4:50900238-50900257 | None:intergenic | 45.0% |
| ! | ATCATAGGTGGTGGTATTGC+TGG | + | chr4.4:50899884-50899903 | MS.gene044749:CDS | 45.0% |
| ! | ATGGGCAAGTTTGAGGTCAA+TGG | + | chr4.4:50901523-50901542 | MS.gene044749:CDS | 45.0% |
| !! | ACCGAAGTATTGACTGCAGA+CGG | + | chr4.4:50901641-50901660 | MS.gene044749:CDS | 45.0% |
| !!! | ATAATTTTTTATATAACAAA+AGG | + | chr4.4:50903182-50903201 | MS.gene044749:intron | 5.0% |
| ACTGCAAGGCCTTCCTTACA+TGG | + | chr4.4:50902285-50902304 | MS.gene044749:intron | 50.0% | |
| ATTGTTGGAGGAGGTCCTAC+TGG | + | chr4.4:50902607-50902626 | MS.gene044749:CDS | 50.0% | |
| CAATGCCACAACACGGCTAT+AGG | + | chr4.4:50902065-50902084 | MS.gene044749:intron | 50.0% | |
| CATTGTAGTGCAGCGGAACT+TGG | - | chr4.4:50902050-50902069 | None:intergenic | 50.0% | |
| CCAGCAAGTTCTACACCAGT+AGG | - | chr4.4:50902625-50902644 | None:intergenic | 50.0% | |
| CCTACTGGTGTAGAACTTGC+TGG | + | chr4.4:50902622-50902641 | MS.gene044749:CDS | 50.0% | |
| GAGTGTGCTATGAAAGGGAG+TGG | - | chr4.4:50903074-50903093 | None:intergenic | 50.0% | |
| GCCGTCTGCAGTCAATACTT+CGG | - | chr4.4:50901645-50901664 | None:intergenic | 50.0% | |
| GGATGTTCAGGGGATGATCA+AGG | + | chr4.4:50902936-50902955 | MS.gene044749:CDS | 50.0% | |
| GTTGTGGCATTGTAGTGCAG+CGG | - | chr4.4:50902057-50902076 | None:intergenic | 50.0% | |
| TCTCCAGACTTGATGTAGCC+AGG | - | chr4.4:50903944-50903963 | None:intergenic | 50.0% | |
| TTGCGGATGATGATTGAGGG+AGG | + | chr4.4:50903806-50903825 | MS.gene044749:CDS | 50.0% | |
| TTTGAATGCCCGACACGTGT+TGG | - | chr4.4:50901372-50901391 | None:intergenic | 50.0% | |
| ! | CCGACACCAGTAGGTCTTTT+TGG | + | chr4.4:50900757-50900776 | MS.gene044749:intron | 50.0% |
| ! | GGCAAGTTTGAGGTCAATGG+TGG | + | chr4.4:50901526-50901545 | MS.gene044749:CDS | 50.0% |
| !! | AGGGATTTTGGCACAGAAGC+AGG | + | chr4.4:50903763-50903782 | MS.gene044749:CDS | 50.0% |
| !! | TTTTGGGTACAGGGTCTGCA+TGG | - | chr4.4:50901706-50901725 | None:intergenic | 50.0% |
| CACTGGTGCACAAAGGACCA+AGG | + | chr4.4:50902680-50902699 | MS.gene044749:CDS | 55.0% | |
| GCACAAAGGACCAAGGCTGT+TGG | + | chr4.4:50902687-50902706 | MS.gene044749:CDS | 55.0% | |
| GGTCAGACACCAACACGTGT+CGG | + | chr4.4:50901360-50901379 | MS.gene044749:intron | 55.0% | |
| GTCAGACACCAACACGTGTC+GGG | + | chr4.4:50901361-50901380 | MS.gene044749:intron | 55.0% | |
| TGGAGCCTATAGCCGTGTTG+TGG | - | chr4.4:50902073-50902092 | None:intergenic | 55.0% | |
| GGCACAACACCGACACCAGT+AGG | + | chr4.4:50900748-50900767 | MS.gene044749:intron | 60.0% | |
| GGCACAGAAGCAGGCAGAAG+TGG | + | chr4.4:50903772-50903791 | MS.gene044749:CDS | 60.0% | |
| TACAGGGTCTGCATGGCCAG+TGG | - | chr4.4:50901699-50901718 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 50899854 | 50904024 | 50899854 | ID=MS.gene044749 |
| chr4.4 | mRNA | 50899854 | 50904024 | 50899854 | ID=MS.gene044749.t1;Parent=MS.gene044749 |
| chr4.4 | exon | 50899854 | 50899960 | 50899854 | ID=MS.gene044749.t1.exon1;Parent=MS.gene044749.t1 |
| chr4.4 | CDS | 50899854 | 50899960 | 50899854 | ID=cds.MS.gene044749.t1;Parent=MS.gene044749.t1 |
| chr4.4 | exon | 50901502 | 50901758 | 50901502 | ID=MS.gene044749.t1.exon2;Parent=MS.gene044749.t1 |
| chr4.4 | CDS | 50901502 | 50901758 | 50901502 | ID=cds.MS.gene044749.t1;Parent=MS.gene044749.t1 |
| chr4.4 | exon | 50902572 | 50903026 | 50902572 | ID=MS.gene044749.t1.exon3;Parent=MS.gene044749.t1 |
| chr4.4 | CDS | 50902572 | 50903026 | 50902572 | ID=cds.MS.gene044749.t1;Parent=MS.gene044749.t1 |
| chr4.4 | exon | 50903752 | 50904024 | 50903752 | ID=MS.gene044749.t1.exon4;Parent=MS.gene044749.t1 |
| chr4.4 | CDS | 50903752 | 50904024 | 50903752 | ID=cds.MS.gene044749.t1;Parent=MS.gene044749.t1 |
| Gene Sequence |
| Protein sequence |
