Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73640.t1 | XP_013455753.1 | 97 | 363 | 11 | 0 | 1 | 363 | 1 | 363 | 1.40E-202 | 715.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73640.t1 | Q54NS9 | 32.3 | 375 | 226 | 7 | 2 | 349 | 23 | 396 | 2.6e-43 | 177.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73640.t1 | A0A072UJ57 | 97.0 | 363 | 11 | 0 | 1 | 363 | 1 | 363 | 1.0e-202 | 715.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene73640 | 0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene73640 | 0.841036 | 6.06E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene73640 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene73640 | 0.801922 | 7.16E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene73640 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene73640 | 0.801441 | 8.99E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene73640 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene73640 | 0.804996 | 1.65E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene73640 | 0.82177 | 3.38E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene73640 | 0.811429 | 7.03E-51 | -1.69E-46 |
| MS.gene051452 | MS.gene73640 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene051757 | MS.gene73640 | 0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene73640 | 0.814777 | 1.30E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene73640 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene73640 | 0.813252 | 2.81E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene73640 | 0.846302 | 2.37E-59 | -1.69E-46 |
| MS.gene052611 | MS.gene73640 | 0.810021 | 1.42E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene73640 | 0.840349 | 9.17E-58 | -1.69E-46 |
| MS.gene052896 | MS.gene73640 | 0.823539 | 1.31E-53 | -1.69E-46 |
| MS.gene052954 | MS.gene73640 | 0.800141 | 1.66E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene73640 | 0.838473 | 2.82E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene73640 | 0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene73640 | 0.801324 | 9.50E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene73640 | 0.800735 | 1.25E-48 | -1.69E-46 |
| MS.gene054472 | MS.gene73640 | 0.825838 | 3.77E-54 | -1.69E-46 |
| MS.gene05462 | MS.gene73640 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene73640 | 0.822923 | 1.83E-53 | -1.69E-46 |
| MS.gene054657 | MS.gene73640 | 0.80355 | 3.30E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene73640 | 0.813513 | 2.46E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene73640 | 0.802195 | 6.29E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene73640 | 0.823638 | 1.24E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene73640 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene73640 | 0.842249 | 2.90E-58 | -1.69E-46 |
| MS.gene055818 | MS.gene73640 | 0.853861 | 1.81E-61 | -1.69E-46 |
| MS.gene056595 | MS.gene73640 | 0.801847 | 7.42E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene73640 | 0.802311 | 5.96E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene73640 | 0.811193 | 7.91E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene73640 | 0.824723 | 6.92E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene73640 | 0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene73640 | 0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene73640 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene73640 | 0.818301 | 2.11E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene73640 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene73640 | 0.828593 | 8.25E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene73640 | 0.816878 | 4.41E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene73640 | 0.803537 | 3.32E-49 | -1.69E-46 |
| MS.gene059151 | MS.gene73640 | 0.808237 | 3.42E-50 | -1.69E-46 |
| MS.gene059317 | MS.gene73640 | 0.835437 | 1.68E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene73640 | 0.843167 | 1.66E-58 | -1.69E-46 |
| MS.gene060011 | MS.gene73640 | 0.808621 | 2.83E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene73640 | 0.836041 | 1.18E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene73640 | 0.802183 | 6.33E-49 | -1.69E-46 |
| MS.gene060586 | MS.gene73640 | 0.817606 | 3.02E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene73640 | 0.815269 | 1.01E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene73640 | 0.811161 | 8.04E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73640 | MS.gene66676 | PPI |
| MS.gene66676 | MS.gene73640 | PPI |
| MS.gene98633 | MS.gene73640 | PPI |
| MS.gene044749 | MS.gene73640 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73640.t1 | MTR_4g051645 | 96.970 | 363 | 11 | 0 | 1 | 363 | 1 | 363 | 0.0 | 733 |
| MS.gene73640.t1 | MTR_4g051622 | 68.820 | 356 | 109 | 2 | 6 | 360 | 3 | 357 | 0.0 | 508 |
| MS.gene73640.t1 | MTR_2g061440 | 80.000 | 70 | 14 | 0 | 141 | 210 | 193 | 262 | 7.24e-27 | 112 |
| MS.gene73640.t1 | MTR_0931s0010 | 26.217 | 267 | 139 | 10 | 78 | 298 | 313 | 567 | 1.80e-11 | 66.2 |
| MS.gene73640.t1 | MTR_4g091240 | 24.779 | 339 | 173 | 14 | 6 | 276 | 52 | 376 | 6.73e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73640.t1 | AT5G22140 | 67.606 | 355 | 114 | 1 | 7 | 361 | 12 | 365 | 2.10e-177 | 497 |
| MS.gene73640.t1 | AT3G44190 | 65.730 | 356 | 121 | 1 | 7 | 362 | 12 | 366 | 4.70e-177 | 496 |
| MS.gene73640.t1 | AT3G44190 | 65.176 | 313 | 108 | 1 | 50 | 362 | 1 | 312 | 1.20e-152 | 432 |
| MS.gene73640.t1 | AT5G22140 | 65.705 | 312 | 106 | 1 | 50 | 361 | 1 | 311 | 3.97e-150 | 426 |
| MS.gene73640.t1 | AT5G08740 | 26.329 | 395 | 219 | 16 | 8 | 336 | 82 | 470 | 4.76e-13 | 70.5 |
Find 83 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTTTCACTCCTAATTT+TGG | 0.072580 | 4.1:-46484093 | None:intergenic |
| CAGACCCTGTACCCAAAATT+AGG | 0.314387 | 4.1:+46484081 | MS.gene73640:CDS |
| ATTCAAGTTTCTACAATATG+AGG | 0.339522 | 4.1:-46486375 | None:intergenic |
| GCTCGTTCCATTCTGATTGT+TGG | 0.351633 | 4.1:+46484965 | MS.gene73640:CDS |
| ATCATAGGTGGTGGTATTGC+TGG | 0.353406 | 4.1:+46482317 | MS.gene73640:CDS |
| GATAGTCATATGCAATCTTT+TGG | 0.353835 | 4.1:-46484037 | None:intergenic |
| ACGATAAGTGGAAGAATTCC+TGG | 0.370478 | 4.1:+46486294 | MS.gene73640:CDS |
| CTGCTGATAAGACTCTAAAA+TGG | 0.374188 | 4.1:+46485101 | MS.gene73640:CDS |
| TAGATGAAAACTTGAGAGTC+AGG | 0.392349 | 4.1:+46485332 | MS.gene73640:CDS |
| AACAAAATCTATCGAACTTC+AGG | 0.412309 | 4.1:+46485193 | MS.gene73640:CDS |
| TGGAGATATTACAAACATTC+CGG | 0.415600 | 4.1:+46485378 | MS.gene73640:CDS |
| GAATTCTTCCACTTATCGTT+AGG | 0.425584 | 4.1:-46486290 | None:intergenic |
| CGTTCCATTCTGATTGTTGG+AGG | 0.439915 | 4.1:+46484968 | MS.gene73640:CDS |
| AGATTACATGGGCAAGTTTG+AGG | 0.445110 | 4.1:+46483889 | MS.gene73640:CDS |
| TGGTAGAACAAGAAAACAAA+TGG | 0.450303 | 4.1:+46486344 | MS.gene73640:CDS |
| ATTGTTGGAGGAGGTCCTAC+TGG | 0.453795 | 4.1:+46484980 | MS.gene73640:CDS |
| CCTACTGGTGTAGAACTTGC+TGG | 0.457077 | 4.1:+46484995 | MS.gene73640:CDS |
| ATACAAACCACATTCGGTAT+TGG | 0.458786 | 4.1:+46486221 | MS.gene73640:CDS |
| AAGTCAGGAGATTTGTTTGT+TGG | 0.461404 | 4.1:+46486324 | MS.gene73640:CDS |
| TTGTGCACGGGAAAACCATT+TGG | 0.461944 | 4.1:+46485247 | MS.gene73640:CDS |
| TTGAGGGAGGTAAAGAATGT+TGG | 0.465885 | 4.1:+46486190 | MS.gene73640:CDS |
| TTCCGTCACATTAACAGCAC+TGG | 0.472573 | 4.1:-46483991 | None:intergenic |
| GACTATCTTGTTATTGCCAC+TGG | 0.472612 | 4.1:+46484053 | MS.gene73640:CDS |
| CACTGTTTAAGTCGACTGCT+TGG | 0.476065 | 4.1:-46485156 | None:intergenic |
| CCAAGGCTGTTGGAATTCAT+AGG | 0.479557 | 4.1:+46485070 | MS.gene73640:CDS |
| CATAGAGAGTACTTCACAAA+AGG | 0.482459 | 4.1:+46483954 | MS.gene73640:CDS |
| ATGGGCAAGTTTGAGGTCAA+TGG | 0.483082 | 4.1:+46483896 | MS.gene73640:CDS |
| TTGCCATTCCTAACGATAAG+TGG | 0.487177 | 4.1:+46486282 | MS.gene73640:CDS |
| GAAGAGCGAGTTGTTATCAT+AGG | 0.489090 | 4.1:+46482302 | MS.gene73640:CDS |
| ATTCCTGGCTACATCAAGTC+AGG | 0.489268 | 4.1:+46486309 | MS.gene73640:CDS |
| GGTAGAACAAGAAAACAAAT+GGG | 0.492449 | 4.1:+46486345 | MS.gene73640:CDS |
| ACCAGTGTAACCTTCTTATC+CGG | 0.492762 | 4.1:-46485037 | None:intergenic |
| TCCATTCTGATTGTTGGAGG+AGG | 0.499427 | 4.1:+46484971 | MS.gene73640:CDS |
| CTTCCACTTATCGTTAGGAA+TGG | 0.501735 | 4.1:-46486285 | None:intergenic |
| TCTCCTGACTTGATGTAGCC+AGG | 0.502581 | 4.1:-46486312 | None:intergenic |
| AGGGAGGTAAAGAATGTTGG+AGG | 0.511205 | 4.1:+46486193 | MS.gene73640:CDS |
| TATCAATGTCCTTTCTGCAA+AGG | 0.514570 | 4.1:-46483928 | None:intergenic |
| AACTTGCGAATGATGATTGA+GGG | 0.521371 | 4.1:+46486174 | MS.gene73640:CDS |
| GCCGTCTGCAGTCAATACTT+CGG | 0.521568 | 4.1:-46484015 | None:intergenic |
| GGCACAGAAGCAGGCAGAAG+TGG | 0.522122 | 4.1:+46486143 | MS.gene73640:CDS |
| TTAAGCCATGACGAACCAAA+TGG | 0.523343 | 4.1:-46485262 | None:intergenic |
| AGATTGTCATTTCTTGTGCA+CGG | 0.527578 | 4.1:+46485234 | MS.gene73640:CDS |
| GATTGTCATTTCTTGTGCAC+GGG | 0.534440 | 4.1:+46485235 | MS.gene73640:CDS |
| GGAAACATACAAACCACATT+CGG | 0.534598 | 4.1:+46486215 | MS.gene73640:CDS |
| GAACTTGCGAATGATGATTG+AGG | 0.536991 | 4.1:+46486173 | MS.gene73640:CDS |
| GCACAAAGGACCAAGGCTGT+TGG | 0.547803 | 4.1:+46485060 | MS.gene73640:CDS |
| CCTATGAATTCCAACAGCCT+TGG | 0.554290 | 4.1:-46485070 | None:intergenic |
| GAAAACCATTTGGTTCGTCA+TGG | 0.555238 | 4.1:+46485257 | MS.gene73640:CDS |
| ACTATTGCCAATACCGAATG+TGG | 0.556477 | 4.1:-46486228 | None:intergenic |
| ACCTCCTCCAACAATCAGAA+TGG | 0.560963 | 4.1:-46484972 | None:intergenic |
| AATGTCCTTTCTGCAAAGGA+TGG | 0.563728 | 4.1:-46483924 | None:intergenic |
| GAAATGACAATCTGCTTCGA+TGG | 0.564040 | 4.1:-46485224 | None:intergenic |
| TGGCAATAGTTTCACTTGGG+AGG | 0.566676 | 4.1:+46486241 | MS.gene73640:CDS |
| TTCAAGTTTCTACAATATGA+GGG | 0.567555 | 4.1:-46486374 | None:intergenic |
| GGATGTTCAGGGGATGATCA+AGG | 0.567739 | 4.1:+46485309 | MS.gene73640:CDS |
| CGAGTTGTTATCATAGGTGG+TGG | 0.569292 | 4.1:+46482308 | MS.gene73640:CDS |
| TGGAACCATCCTTTGCAGAA+AGG | 0.578477 | 4.1:+46483919 | MS.gene73640:CDS |
| AAAATCTATCGAACTTCAGG+AGG | 0.584727 | 4.1:+46485196 | MS.gene73640:CDS |
| ACCGAAGTATTGACTGCAGA+CGG | 0.586673 | 4.1:+46484014 | MS.gene73640:CDS |
| TCCGGATAAGAAGGTTACAC+TGG | 0.588992 | 4.1:+46485036 | MS.gene73640:CDS |
| GTATTGGCAATAGTTTCACT+TGG | 0.592229 | 4.1:+46486237 | MS.gene73640:CDS |
| ATACAACAGGAAATCAAGCA+AGG | 0.593247 | 4.1:+46486114 | MS.gene73640:intron |
| GAGCGAGTTGTTATCATAGG+TGG | 0.596638 | 4.1:+46482305 | MS.gene73640:CDS |
| AGATGAAAACTTGAGAGTCA+GGG | 0.597572 | 4.1:+46485333 | MS.gene73640:CDS |
| TACAGGGTCTGCATGGCCAG+TGG | 0.598096 | 4.1:-46484069 | None:intergenic |
| GACTTAAACAGTGACACAGA+TGG | 0.600678 | 4.1:+46485166 | MS.gene73640:CDS |
| ATCCAGTGCTGTTAATGTGA+CGG | 0.604022 | 4.1:+46483989 | MS.gene73640:CDS |
| TATTGGCAATAGTTTCACTT+GGG | 0.604816 | 4.1:+46486238 | MS.gene73640:CDS |
| GGCAAGTTTGAGGTCAATGG+TGG | 0.607275 | 4.1:+46483899 | MS.gene73640:CDS |
| AAATCTATCGAACTTCAGGA+GGG | 0.621050 | 4.1:+46485197 | MS.gene73640:CDS |
| TACAACAGGAAATCAAGCAA+GGG | 0.622339 | 4.1:+46486115 | MS.gene73640:intron |
| CCAGCAAGTTCTACACCAGT+AGG | 0.629097 | 4.1:-46484995 | None:intergenic |
| AATCTATCGAACTTCAGGAG+GGG | 0.640518 | 4.1:+46485198 | MS.gene73640:CDS |
| GTTGAAATCTAAGAATGTTG+AGG | 0.652877 | 4.1:+46485123 | MS.gene73640:CDS |
| CACTGGTGCACAAAGGACCA+AGG | 0.656142 | 4.1:+46485053 | MS.gene73640:CDS |
| GGGAGGTAAAGAATGTTGGA+GGG | 0.657144 | 4.1:+46486194 | MS.gene73640:CDS |
| TAACAGCACTGGATGTAACA+AGG | 0.659638 | 4.1:-46483980 | None:intergenic |
| GATGAAAACTTGAGAGTCAG+GGG | 0.662072 | 4.1:+46485334 | MS.gene73640:CDS |
| AGAATAATTACGGATCAATG+AGG | 0.662291 | 4.1:-46482382 | None:intergenic |
| AAGGTTACACTGGTGCACAA+AGG | 0.685956 | 4.1:+46485046 | MS.gene73640:CDS |
| GTAGAACAAGAAAACAAATG+GGG | 0.698957 | 4.1:+46486346 | MS.gene73640:CDS |
| TTGCGAATGATGATTGAGGG+AGG | 0.701459 | 4.1:+46486177 | MS.gene73640:CDS |
| AAAATGACTTGGATGTTCAG+GGG | 0.703696 | 4.1:+46485299 | MS.gene73640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAAGTACTTATTTTTAA+AGG | - | chr4.1:46482769-46482788 | None:intergenic | 10.0% |
| !!! | TAGATTCATTTTAATTTTTA+TGG | + | chr4.1:46484865-46484884 | MS.gene73640:intron | 10.0% |
| !!! | TATAAGTACTTATTTTTAAA+GGG | - | chr4.1:46482768-46482787 | None:intergenic | 10.0% |
| !! | AATATTTAGATAATAAAGCA+TGG | - | chr4.1:46485786-46485805 | None:intergenic | 15.0% |
| !! | AGAATTCATCAATATAAAAA+AGG | + | chr4.1:46484110-46484129 | MS.gene73640:CDS | 15.0% |
| !! | TAAAGAAGAAAGAATAATTA+CGG | - | chr4.1:46482395-46482414 | None:intergenic | 15.0% |
| !! | TATAGTATTCGTTAAATAAT+AGG | + | chr4.1:46484698-46484717 | MS.gene73640:intron | 15.0% |
| !! | TATCTATTAACATAAACATT+GGG | + | chr4.1:46483191-46483210 | MS.gene73640:intron | 15.0% |
| !! | TTATCTATTAACATAAACAT+TGG | + | chr4.1:46483190-46483209 | MS.gene73640:intron | 15.0% |
| !!! | CTTTTATTTTCTGAAAATAT+AGG | - | chr4.1:46483686-46483705 | None:intergenic | 15.0% |
| !!! | GATAAATACTAATGTTTTAA+GGG | + | chr4.1:46482789-46482808 | MS.gene73640:intron | 15.0% |
| !!! | TGATAAATACTAATGTTTTA+AGG | + | chr4.1:46482788-46482807 | MS.gene73640:intron | 15.0% |
| !! | AAAATTGAAACTTGAAAACT+TGG | - | chr4.1:46482985-46483004 | None:intergenic | 20.0% |
| !! | AAAATTGAAACTTTCAAAAC+TGG | - | chr4.1:46482489-46482508 | None:intergenic | 20.0% |
| !! | AAATTGAAACTTTCAAAACT+GGG | - | chr4.1:46482488-46482507 | None:intergenic | 20.0% |
| !! | ATAATATCATAAACACTGAA+AGG | - | chr4.1:46484245-46484264 | None:intergenic | 20.0% |
| !! | ATTAATGTAAAATGAATGAG+AGG | + | chr4.1:46485842-46485861 | MS.gene73640:intron | 20.0% |
| !! | ATTTGAACTTATAAGTACTT+TGG | + | chr4.1:46482556-46482575 | MS.gene73640:intron | 20.0% |
| !! | TAAAGAGATTAAAATGCAAT+AGG | - | chr4.1:46486058-46486077 | None:intergenic | 20.0% |
| !! | TACATTAATATCTTCATCAT+TGG | - | chr4.1:46485831-46485850 | None:intergenic | 20.0% |
| !!! | AAAAGTGTTTTTATGCATTA+AGG | + | chr4.1:46482516-46482535 | MS.gene73640:intron | 20.0% |
| !!! | AAATTAGTCTCAGTTATTTT+GGG | - | chr4.1:46484764-46484783 | None:intergenic | 20.0% |
| !!! | CTTTTTAGCTTATTTGTAAA+CGG | + | chr4.1:46482627-46482646 | MS.gene73640:intron | 20.0% |
| !!! | TTTTCAGAAAATAAAAGTCA+TGG | + | chr4.1:46483689-46483708 | MS.gene73640:intron | 20.0% |
| !!! | TTTTGAAAGTTTCAATTTTG+AGG | + | chr4.1:46482490-46482509 | MS.gene73640:intron | 20.0% |
| ! | AAAATGCAATAGGTTTATAG+CGG | - | chr4.1:46486048-46486067 | None:intergenic | 25.0% |
| ! | AAATTCCAATTAGACATGAA+AGG | - | chr4.1:46482914-46482933 | None:intergenic | 25.0% |
| ! | AAGATTCCAAAAACACAAAA+GGG | - | chr4.1:46482447-46482466 | None:intergenic | 25.0% |
| ! | AATTGAATTCAATTGAATCC+AGG | + | chr4.1:46483853-46483872 | MS.gene73640:intron | 25.0% |
| ! | CAATAAATCAATCATCTGTT+TGG | - | chr4.1:46482829-46482848 | None:intergenic | 25.0% |
| ! | GGATTCAATTGAATTCAATT+AGG | - | chr4.1:46483853-46483872 | None:intergenic | 25.0% |
| ! | GGTATTTCTTTAACAAAAGA+TGG | - | chr4.1:46483595-46483614 | None:intergenic | 25.0% |
| ! | TAAGATTCCAAAAACACAAA+AGG | - | chr4.1:46482448-46482467 | None:intergenic | 25.0% |
| ! | TAGTACAAAGTGATGTAAAA+TGG | - | chr4.1:46484466-46484485 | None:intergenic | 25.0% |
| ! | TCAAATACGTCAATCTAAAT+AGG | + | chr4.1:46485705-46485724 | MS.gene73640:intron | 25.0% |
| !! | AATTCTTTCACTCCTAATTT+TGG | - | chr4.1:46484096-46484115 | None:intergenic | 25.0% |
| !! | ATTCTTTCACTCCTAATTTT+GGG | - | chr4.1:46484095-46484114 | None:intergenic | 25.0% |
| !! | GTGTATTGTGAATGATTTTA+TGG | + | chr4.1:46484840-46484859 | MS.gene73640:intron | 25.0% |
| !!! | AAGTGTGTTTTTTTTGGAAT+TGG | + | chr4.1:46483014-46483033 | MS.gene73640:intron | 25.0% |
| !!! | AGGAATATTTTGAGATTACA+TGG | + | chr4.1:46483877-46483896 | MS.gene73640:CDS | 25.0% |
| !!! | CAAATTAGTCTCAGTTATTT+TGG | - | chr4.1:46484765-46484784 | None:intergenic | 25.0% |
| !!! | GGAATATTTTGAGATTACAT+GGG | + | chr4.1:46483878-46483897 | MS.gene73640:CDS | 25.0% |
| !!! | GTTGAAAAGTGTGTTTTTTT+TGG | + | chr4.1:46483008-46483027 | MS.gene73640:intron | 25.0% |
| !!! | GTTTTCAAGTTTCAATTTTG+AGG | + | chr4.1:46482986-46483005 | MS.gene73640:intron | 25.0% |
| !!! | TGAACATATGTTTGTTTTGA+CGG | + | chr4.1:46484297-46484316 | MS.gene73640:intron | 25.0% |
| AAAAGCCTATATTGTTTGGT+TGG | + | chr4.1:46482683-46482702 | MS.gene73640:intron | 30.0% | |
| AACAAAATCTATCGAACTTC+AGG | + | chr4.1:46485193-46485212 | MS.gene73640:CDS | 30.0% | |
| AACTGTGTTGAAAAATGACT+TGG | + | chr4.1:46485288-46485307 | MS.gene73640:CDS | 30.0% | |
| AATCTCAAAATATTCCTTCC+TGG | - | chr4.1:46483874-46483893 | None:intergenic | 30.0% | |
| AGAATAATTACGGATCAATG+AGG | - | chr4.1:46482385-46482404 | None:intergenic | 30.0% | |
| ATGCAAACACTAAAATCAGT+AGG | - | chr4.1:46485963-46485982 | None:intergenic | 30.0% | |
| CATATAAGCGCTTATGTATA+AGG | - | chr4.1:46483616-46483635 | None:intergenic | 30.0% | |
| CCATTAAGAAATAAACCATC+AGG | - | chr4.1:46486088-46486107 | None:intergenic | 30.0% | |
| CTTCAATGTAAATGTATGGT+GGG | - | chr4.1:46484333-46484352 | None:intergenic | 30.0% | |
| GGTAGAACAAGAAAACAAAT+GGG | + | chr4.1:46486345-46486364 | MS.gene73640:CDS | 30.0% | |
| GTAGAACAAGAAAACAAATG+GGG | + | chr4.1:46486346-46486365 | MS.gene73640:CDS | 30.0% | |
| GTATGTAATCACAAGTGTTA+AGG | + | chr4.1:46483711-46483730 | MS.gene73640:intron | 30.0% | |
| GTTGAAATCTAAGAATGTTG+AGG | + | chr4.1:46485123-46485142 | MS.gene73640:CDS | 30.0% | |
| TATTGGCAATAGTTTCACTT+GGG | + | chr4.1:46486238-46486257 | MS.gene73640:CDS | 30.0% | |
| TGACAAAAGCCTATATTGTT+TGG | + | chr4.1:46482679-46482698 | MS.gene73640:intron | 30.0% | |
| TGGAGATATTACAAACATTC+CGG | + | chr4.1:46485378-46485397 | MS.gene73640:CDS | 30.0% | |
| TGGTAGAACAAGAAAACAAA+TGG | + | chr4.1:46486344-46486363 | MS.gene73640:CDS | 30.0% | |
| ! | AAAAATGACTTGGATGTTCA+GGG | + | chr4.1:46485298-46485317 | MS.gene73640:CDS | 30.0% |
| ! | AAAGTCTTTTAAACTCGTGA+TGG | - | chr4.1:46484579-46484598 | None:intergenic | 30.0% |
| ! | ACTGTTTTCATAAGCTATCT+TGG | + | chr4.1:46485614-46485633 | MS.gene73640:intron | 30.0% |
| ! | ATAAGTATTGTGAGACTGTT+TGG | - | chr4.1:46483413-46483432 | None:intergenic | 30.0% |
| ! | CCTGATGGTTTATTTCTTAA+TGG | + | chr4.1:46486085-46486104 | MS.gene73640:intron | 30.0% |
| ! | GATAGTCATATGCAATCTTT+TGG | - | chr4.1:46484040-46484059 | None:intergenic | 30.0% |
| ! | GATATACCCTTTTGTGTTTT+TGG | + | chr4.1:46482438-46482457 | MS.gene73640:intron | 30.0% |
| ! | TAAGTATTGTGAGACTGTTT+GGG | - | chr4.1:46483412-46483431 | None:intergenic | 30.0% |
| ! | TAGTTAATTTTCCATGCACA+TGG | + | chr4.1:46483795-46483814 | MS.gene73640:intron | 30.0% |
| !! | AATCTTTAAAGTTCACTGCA+AGG | + | chr4.1:46484644-46484663 | MS.gene73640:intron | 30.0% |
| !! | TTAATGGACTTCAATACAAC+AGG | + | chr4.1:46486101-46486120 | MS.gene73640:intron | 30.0% |
| AAAATCTATCGAACTTCAGG+AGG | + | chr4.1:46485196-46485215 | MS.gene73640:CDS | 35.0% | |
| AAACACTTGTGAGACTGTTT+GGG | - | chr4.1:46485669-46485688 | None:intergenic | 35.0% | |
| AAACTGTTTGGAAGAGCTTA+TGG | + | chr4.1:46483476-46483495 | MS.gene73640:intron | 35.0% | |
| AAATCTATCGAACTTCAGGA+GGG | + | chr4.1:46485197-46485216 | MS.gene73640:CDS | 35.0% | |
| AACTTGCGAATGATGATTGA+GGG | + | chr4.1:46486174-46486193 | MS.gene73640:CDS | 35.0% | |
| AATTGCTTAGCCAATCTTTG+AGG | + | chr4.1:46484265-46484284 | MS.gene73640:intron | 35.0% | |
| AGATGAAAACTTGAGAGTCA+GGG | + | chr4.1:46485333-46485352 | MS.gene73640:CDS | 35.0% | |
| AGTCTACTATCCTCAAAGAT+TGG | - | chr4.1:46484278-46484297 | None:intergenic | 35.0% | |
| ATACAAACCACATTCGGTAT+TGG | + | chr4.1:46486221-46486240 | MS.gene73640:CDS | 35.0% | |
| ATACAACAGGAAATCAAGCA+AGG | + | chr4.1:46486114-46486133 | MS.gene73640:intron | 35.0% | |
| CAATGAGGAACACACATAAT+TGG | - | chr4.1:46485750-46485769 | None:intergenic | 35.0% | |
| CACGGATAGTAAAAAAACAG+TGG | + | chr4.1:46484392-46484411 | MS.gene73640:intron | 35.0% | |
| CCAACAGAGCTTATGAAAAT+GGG | - | chr4.1:46483519-46483538 | None:intergenic | 35.0% | |
| GAATTCAATTGAATCCAGGA+AGG | + | chr4.1:46483857-46483876 | MS.gene73640:intron | 35.0% | |
| GAATTCTTCCACTTATCGTT+AGG | - | chr4.1:46486293-46486312 | None:intergenic | 35.0% | |
| GAGAACCTTTCATGTCTAAT+TGG | + | chr4.1:46482906-46482925 | MS.gene73640:intron | 35.0% | |
| GATTCATTTCATACCATGCA+AGG | - | chr4.1:46484674-46484693 | None:intergenic | 35.0% | |
| GCTTCAATGTAAATGTATGG+TGG | - | chr4.1:46484334-46484353 | None:intergenic | 35.0% | |
| GGAAACATACAAACCACATT+CGG | + | chr4.1:46486215-46486234 | MS.gene73640:CDS | 35.0% | |
| GGAGCTTCAATGTAAATGTA+TGG | - | chr4.1:46484337-46484356 | None:intergenic | 35.0% | |
| GTAGTCCAACCAAACAATAT+AGG | - | chr4.1:46482691-46482710 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | - | chr4.1:46485670-46485689 | None:intergenic | 35.0% | |
| TACAACAGGAAATCAAGCAA+GGG | + | chr4.1:46486115-46486134 | MS.gene73640:intron | 35.0% | |
| TAGATGAAAACTTGAGAGTC+AGG | + | chr4.1:46485332-46485351 | MS.gene73640:CDS | 35.0% | |
| TATCAATGTCCTTTCTGCAA+AGG | - | chr4.1:46483931-46483950 | None:intergenic | 35.0% | |
| TCCAACAGAGCTTATGAAAA+TGG | - | chr4.1:46483520-46483539 | None:intergenic | 35.0% | |
| TTCAGGTGGTGATTGTATAT+GGG | + | chr4.1:46482742-46482761 | MS.gene73640:intron | 35.0% | |
| TTCTTCCTTTGAACTCATGT+AGG | + | chr4.1:46484619-46484638 | MS.gene73640:intron | 35.0% | |
| TTGTACTACACCATGTAATG+CGG | + | chr4.1:46484478-46484497 | MS.gene73640:intron | 35.0% | |
| TTTGGTTGGACTACTTAATC+CGG | + | chr4.1:46482697-46482716 | MS.gene73640:intron | 35.0% | |
| ! | AAAATGACTTGGATGTTCAG+GGG | + | chr4.1:46485299-46485318 | MS.gene73640:CDS | 35.0% |
| ! | AAGTCAGGAGATTTGTTTGT+TGG | + | chr4.1:46486324-46486343 | MS.gene73640:CDS | 35.0% |
| ! | AGATTGTCATTTCTTGTGCA+CGG | + | chr4.1:46485234-46485253 | MS.gene73640:CDS | 35.0% |
| ! | ATGAAAGGTTCTCTTGCTAT+GGG | - | chr4.1:46482899-46482918 | None:intergenic | 35.0% |
| ! | ATGAGAGGTACAATATGTAC+TGG | + | chr4.1:46485857-46485876 | MS.gene73640:intron | 35.0% |
| ! | ATTAGCCTACATGAGTTCAA+AGG | - | chr4.1:46484627-46484646 | None:intergenic | 35.0% |
| ! | CAGAACAACATTTTTGCAGT+TGG | + | chr4.1:46485358-46485377 | MS.gene73640:CDS | 35.0% |
| ! | CTGCTGATAAGACTCTAAAA+TGG | + | chr4.1:46485101-46485120 | MS.gene73640:CDS | 35.0% |
| ! | GAAAAATGACTTGGATGTTC+AGG | + | chr4.1:46485297-46485316 | MS.gene73640:CDS | 35.0% |
| ! | GAAGAAACTCGAGTATTGTT+TGG | - | chr4.1:46484605-46484624 | None:intergenic | 35.0% |
| ! | GGGTTCTAATATTTCTTCCA+TGG | - | chr4.1:46484744-46484763 | None:intergenic | 35.0% |
| ! | GTATTGGCAATAGTTTCACT+TGG | + | chr4.1:46486237-46486256 | MS.gene73640:CDS | 35.0% |
| ! | TTTCAGGTGGTGATTGTATA+TGG | + | chr4.1:46482741-46482760 | MS.gene73640:intron | 35.0% |
| !! | CATAGAGAGTACTTCACAAA+AGG | + | chr4.1:46483954-46483973 | MS.gene73640:CDS | 35.0% |
| !! | CTTTTGTGAAGTACTCTCTA+TGG | - | chr4.1:46483956-46483975 | None:intergenic | 35.0% |
| !! | GAAAAAACAGAAGCACTTAC+CGG | - | chr4.1:46485400-46485419 | None:intergenic | 35.0% |
| !!! | AGAGATAGCTGTTGATTTTC+CGG | + | chr4.1:46485018-46485037 | MS.gene73640:CDS | 35.0% |
| !!! | TGTTGATTTTCCGGATAAGA+AGG | + | chr4.1:46485027-46485046 | MS.gene73640:CDS | 35.0% |
| AACAGACCCTTGAAACTGTT+TGG | + | chr4.1:46483464-46483483 | MS.gene73640:intron | 40.0% | |
| AACAGTTTCAAGGGTCTGTT+TGG | - | chr4.1:46483464-46483483 | None:intergenic | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | chr4.1:46485625-46485644 | MS.gene73640:intron | 40.0% | |
| AATCTATCGAACTTCAGGAG+GGG | + | chr4.1:46485198-46485217 | MS.gene73640:CDS | 40.0% | |
| AATGTCCTTTCTGCAAAGGA+TGG | - | chr4.1:46483927-46483946 | None:intergenic | 40.0% | |
| AATTGTGTGTGAGTTTCAGG+TGG | + | chr4.1:46482728-46482747 | MS.gene73640:intron | 40.0% | |
| ACACTGAAAGGCGATCATTA+TGG | - | chr4.1:46484233-46484252 | None:intergenic | 40.0% | |
| ACCAGTGTAACCTTCTTATC+CGG | - | chr4.1:46485040-46485059 | None:intergenic | 40.0% | |
| ACGATAAGTGGAAGAATTCC+TGG | + | chr4.1:46486294-46486313 | MS.gene73640:CDS | 40.0% | |
| ACTATTGCCAATACCGAATG+TGG | - | chr4.1:46486231-46486250 | None:intergenic | 40.0% | |
| AGATTACATGGGCAAGTTTG+AGG | + | chr4.1:46483889-46483908 | MS.gene73640:CDS | 40.0% | |
| AGCAAGTTGTTTATCCAACC+AGG | - | chr4.1:46483219-46483238 | None:intergenic | 40.0% | |
| AGCTCTTCCAAACAGTTTCA+AGG | - | chr4.1:46483474-46483493 | None:intergenic | 40.0% | |
| AGTGTAGCTTTCTATGCACA+TGG | + | chr4.1:46482854-46482873 | MS.gene73640:intron | 40.0% | |
| ATGAAAGGCAAGCTACTAGT+TGG | - | chr4.1:46484358-46484377 | None:intergenic | 40.0% | |
| CATAGCACACTCAACTCAAT+AGG | + | chr4.1:46485455-46485474 | MS.gene73640:intron | 40.0% | |
| CATGAAAGGTTCTCTTGCTA+TGG | - | chr4.1:46482900-46482919 | None:intergenic | 40.0% | |
| CATGTAATGCGGAACAATAG+AGG | + | chr4.1:46484489-46484508 | MS.gene73640:intron | 40.0% | |
| CATTTCATACCATGCAAGGA+AGG | - | chr4.1:46484670-46484689 | None:intergenic | 40.0% | |
| CCTAATTGTGTGTGAGTTTC+AGG | + | chr4.1:46482725-46482744 | MS.gene73640:intron | 40.0% | |
| CCTGAAACTCACACACAATT+AGG | - | chr4.1:46482728-46482747 | None:intergenic | 40.0% | |
| CGGAGAGTCAAAGTTTACAT+AGG | - | chr4.1:46486028-46486047 | None:intergenic | 40.0% | |
| CTCTATTGTTCCGCATTACA+TGG | - | chr4.1:46484491-46484510 | None:intergenic | 40.0% | |
| GAAACTCACACACAATTAGG+AGG | - | chr4.1:46482725-46482744 | None:intergenic | 40.0% | |
| GAAATGACAATCTGCTTCGA+TGG | - | chr4.1:46485227-46485246 | None:intergenic | 40.0% | |
| GAACTTGCGAATGATGATTG+AGG | + | chr4.1:46486173-46486192 | MS.gene73640:CDS | 40.0% | |
| GAAGAGCGAGTTGTTATCAT+AGG | + | chr4.1:46482302-46482321 | MS.gene73640:CDS | 40.0% | |
| GACTTAAACAGTGACACAGA+TGG | + | chr4.1:46485166-46485185 | MS.gene73640:CDS | 40.0% | |
| GAGTTGAGTGTGCTATGAAA+GGG | - | chr4.1:46485452-46485471 | None:intergenic | 40.0% | |
| GATGAAAACTTGAGAGTCAG+GGG | + | chr4.1:46485334-46485353 | MS.gene73640:CDS | 40.0% | |
| GATTGACAACACTGGATGAA+AGG | - | chr4.1:46484373-46484392 | None:intergenic | 40.0% | |
| GCAAGTTGTTTATCCAACCA+GGG | - | chr4.1:46483218-46483237 | None:intergenic | 40.0% | |
| GCTCTTCCAAACAGTTTCAA+GGG | - | chr4.1:46483473-46483492 | None:intergenic | 40.0% | |
| GGCGATCATTATGGTATTGT+AGG | - | chr4.1:46484224-46484243 | None:intergenic | 40.0% | |
| GTGATACCAAGAATGCAGAA+GGG | - | chr4.1:46482943-46482962 | None:intergenic | 40.0% | |
| GTGGTTACGTATACAAAGAG+TGG | - | chr4.1:46485428-46485447 | None:intergenic | 40.0% | |
| TAACATAAACATTGGGACCC+TGG | + | chr4.1:46483198-46483217 | MS.gene73640:intron | 40.0% | |
| TCATCCAGTGTTGTCAATCA+CGG | + | chr4.1:46484374-46484393 | MS.gene73640:intron | 40.0% | |
| TCCATGGTGATACAAGAAGT+CGG | - | chr4.1:46484728-46484747 | None:intergenic | 40.0% | |
| TCTCTTTACAAGCTTCCTGA+TGG | + | chr4.1:46486070-46486089 | MS.gene73640:intron | 40.0% | |
| TGTGATACCAAGAATGCAGA+AGG | - | chr4.1:46482944-46482963 | None:intergenic | 40.0% | |
| TGTTTACCCTTCTGCATTCT+TGG | + | chr4.1:46482934-46482953 | MS.gene73640:intron | 40.0% | |
| TTAAGCCATGACGAACCAAA+TGG | - | chr4.1:46485265-46485284 | None:intergenic | 40.0% | |
| TTGAGGGAGGTAAAGAATGT+TGG | + | chr4.1:46486190-46486209 | MS.gene73640:CDS | 40.0% | |
| TTGGTTGGACTACTTAATCC+GGG | + | chr4.1:46482698-46482717 | MS.gene73640:intron | 40.0% | |
| TTTAGTGTTTGCATTCCTCG+AGG | + | chr4.1:46485969-46485988 | MS.gene73640:intron | 40.0% | |
| TTTCAAGGGTCTGTTTGGAT+TGG | - | chr4.1:46483459-46483478 | None:intergenic | 40.0% | |
| TTTCTATGATGCACAGACAC+AGG | + | chr4.1:46483121-46483140 | MS.gene73640:intron | 40.0% | |
| ! | ATCCAGTGCTGTTAATGTGA+CGG | + | chr4.1:46483989-46484008 | MS.gene73640:CDS | 40.0% |
| ! | ATTGGAGCATCACAAGACTA+AGG | - | chr4.1:46485732-46485751 | None:intergenic | 40.0% |
| ! | CCCATTTTCATAAGCTCTGT+TGG | + | chr4.1:46483516-46483535 | MS.gene73640:intron | 40.0% |
| ! | GAAAACCATTTGGTTCGTCA+TGG | + | chr4.1:46485257-46485276 | MS.gene73640:CDS | 40.0% |
| ! | GAGGTACAATATGTACTGGT+TGG | + | chr4.1:46485861-46485880 | MS.gene73640:intron | 40.0% |
| ! | GATTGTCATTTCTTGTGCAC+GGG | + | chr4.1:46485235-46485254 | MS.gene73640:CDS | 40.0% |
| ! | GGAAATCAAGCAAGGGTTTT+TGG | + | chr4.1:46486122-46486141 | MS.gene73640:intron | 40.0% |
| ! | GGTCTCAGTTTAGTTCAATG+AGG | - | chr4.1:46485765-46485784 | None:intergenic | 40.0% |
| ! | TAACAGCACTGGATGTAACA+AGG | - | chr4.1:46483983-46484002 | None:intergenic | 40.0% |
| ! | TGAGTTGAGTGTGCTATGAA+AGG | - | chr4.1:46485453-46485472 | None:intergenic | 40.0% |
| !! | CACTCCTAATTTTGGGTACA+GGG | - | chr4.1:46484088-46484107 | None:intergenic | 40.0% |
| !! | GACTATCTTGTTATTGCCAC+TGG | + | chr4.1:46484053-46484072 | MS.gene73640:CDS | 40.0% |
| !! | TATGTACTGGTTGGTACTAC+AGG | + | chr4.1:46485870-46485889 | MS.gene73640:intron | 40.0% |
| !! | TCACTCCTAATTTTGGGTAC+AGG | - | chr4.1:46484089-46484108 | None:intergenic | 40.0% |
| AAGGTTACACTGGTGCACAA+AGG | + | chr4.1:46485046-46485065 | MS.gene73640:CDS | 45.0% | |
| ACCTCCTCCAACAATCAGAA+TGG | - | chr4.1:46484975-46484994 | None:intergenic | 45.0% | |
| AGGGAGGTAAAGAATGTTGG+AGG | + | chr4.1:46486193-46486212 | MS.gene73640:CDS | 45.0% | |
| ATAAACATTGGGACCCTGGT+TGG | + | chr4.1:46483202-46483221 | MS.gene73640:intron | 45.0% | |
| ATGGTGATACAAGAAGTCGG+TGG | - | chr4.1:46484725-46484744 | None:intergenic | 45.0% | |
| ATGTGTACATAAGCACCTCG+AGG | - | chr4.1:46485987-46486006 | None:intergenic | 45.0% | |
| ATTCCTGGCTACATCAAGTC+AGG | + | chr4.1:46486309-46486328 | MS.gene73640:CDS | 45.0% | |
| CACTGTTTAAGTCGACTGCT+TGG | - | chr4.1:46485159-46485178 | None:intergenic | 45.0% | |
| CAGACCCTGTACCCAAAATT+AGG | + | chr4.1:46484081-46484100 | MS.gene73640:CDS | 45.0% | |
| CCAAGGCTGTTGGAATTCAT+AGG | + | chr4.1:46485070-46485089 | MS.gene73640:CDS | 45.0% | |
| CCTATGAATTCCAACAGCCT+TGG | - | chr4.1:46485073-46485092 | None:intergenic | 45.0% | |
| CGAGTTGTTATCATAGGTGG+TGG | + | chr4.1:46482308-46482327 | MS.gene73640:CDS | 45.0% | |
| CGTTCCATTCTGATTGTTGG+AGG | + | chr4.1:46484968-46484987 | MS.gene73640:CDS | 45.0% | |
| CTATCCGTGATTGACAACAC+TGG | - | chr4.1:46484381-46484400 | None:intergenic | 45.0% | |
| CTCAACTCAATAGGTTGCTC+AGG | + | chr4.1:46485464-46485483 | MS.gene73640:intron | 45.0% | |
| CTCAATCCAAACAGACCTAC+TGG | - | chr4.1:46483160-46483179 | None:intergenic | 45.0% | |
| GAGCGAGTTGTTATCATAGG+TGG | + | chr4.1:46482305-46482324 | MS.gene73640:CDS | 45.0% | |
| GCTCGTTCCATTCTGATTGT+TGG | + | chr4.1:46484965-46484984 | MS.gene73640:CDS | 45.0% | |
| GGGAGGTAAAGAATGTTGGA+GGG | + | chr4.1:46486194-46486213 | MS.gene73640:CDS | 45.0% | |
| TAATTCGACAGCCATGTGCA+TGG | - | chr4.1:46483809-46483828 | None:intergenic | 45.0% | |
| TAGGTTGCTCAGGTCATGTT+TGG | + | chr4.1:46485474-46485493 | MS.gene73640:intron | 45.0% | |
| TCCATTCTGATTGTTGGAGG+AGG | + | chr4.1:46484971-46484990 | MS.gene73640:CDS | 45.0% | |
| TCCGGATAAGAAGGTTACAC+TGG | + | chr4.1:46485036-46485055 | MS.gene73640:CDS | 45.0% | |
| TCTGAATGTCTGACACGTGT+TGG | - | chr4.1:46483744-46483763 | None:intergenic | 45.0% | |
| TGCACTACAATGCCACAACA+CGG | + | chr4.1:46484431-46484450 | MS.gene73640:intron | 45.0% | |
| TGGAACCATCCTTTGCAGAA+AGG | + | chr4.1:46483919-46483938 | MS.gene73640:CDS | 45.0% | |
| TGGCAATAGTTTCACTTGGG+AGG | + | chr4.1:46486241-46486260 | MS.gene73640:CDS | 45.0% | |
| TTCCGTCACATTAACAGCAC+TGG | - | chr4.1:46483994-46484013 | None:intergenic | 45.0% | |
| TTGCGAATGATGATTGAGGG+AGG | + | chr4.1:46486177-46486196 | MS.gene73640:CDS | 45.0% | |
| TTGTGCACGGGAAAACCATT+TGG | + | chr4.1:46485247-46485266 | MS.gene73640:CDS | 45.0% | |
| ! | ACCGACTTCTTGTATCACCA+TGG | + | chr4.1:46484724-46484743 | MS.gene73640:intron | 45.0% |
| ! | AGGCTTTTGTCAGTTGAGCT+AGG | - | chr4.1:46482671-46482690 | None:intergenic | 45.0% |
| ! | ATCATAGGTGGTGGTATTGC+TGG | + | chr4.1:46482317-46482336 | MS.gene73640:CDS | 45.0% |
| ! | ATGGGCAAGTTTGAGGTCAA+TGG | + | chr4.1:46483896-46483915 | MS.gene73640:CDS | 45.0% |
| !! | ACCGAAGTATTGACTGCAGA+CGG | + | chr4.1:46484014-46484033 | MS.gene73640:CDS | 45.0% |
| !!! | ATAATTTTTTATATAACAAA+AGG | + | chr4.1:46485555-46485574 | MS.gene73640:intron | 5.0% |
| ATTGTTGGAGGAGGTCCTAC+TGG | + | chr4.1:46484980-46484999 | MS.gene73640:CDS | 50.0% | |
| CAATGCCACAACACGGCTAT+AGG | + | chr4.1:46484438-46484457 | MS.gene73640:intron | 50.0% | |
| CACACACAATTAGGAGGTCC+CGG | - | chr4.1:46482719-46482738 | None:intergenic | 50.0% | |
| CATTGTAGTGCAGCGGAACT+TGG | - | chr4.1:46484423-46484442 | None:intergenic | 50.0% | |
| CCAAACAGACCTACTGGTGT+CGG | - | chr4.1:46483154-46483173 | None:intergenic | 50.0% | |
| CCAGCAAGTTCTACACCAGT+AGG | - | chr4.1:46484998-46485017 | None:intergenic | 50.0% | |
| CCTACTGGTGTAGAACTTGC+TGG | + | chr4.1:46484995-46485014 | MS.gene73640:CDS | 50.0% | |
| GAGTGTGCTATGAAAGGGAG+TGG | - | chr4.1:46485447-46485466 | None:intergenic | 50.0% | |
| GCCGTCTGCAGTCAATACTT+CGG | - | chr4.1:46484018-46484037 | None:intergenic | 50.0% | |
| GGATGTTCAGGGGATGATCA+AGG | + | chr4.1:46485309-46485328 | MS.gene73640:CDS | 50.0% | |
| GTTGTGGCATTGTAGTGCAG+CGG | - | chr4.1:46484430-46484449 | None:intergenic | 50.0% | |
| ! | GGCAAGTTTGAGGTCAATGG+TGG | + | chr4.1:46483899-46483918 | MS.gene73640:CDS | 50.0% |
| ! | TCTCCTGACTTGATGTAGCC+AGG | - | chr4.1:46486315-46486334 | None:intergenic | 50.0% |
| !! | TTTTGGGTACAGGGTCTGCA+TGG | - | chr4.1:46484079-46484098 | None:intergenic | 50.0% |
| !!! | AGGGTTTTTGGCACAGAAGC+AGG | + | chr4.1:46486134-46486153 | MS.gene73640:CDS | 50.0% |
| ACTGCAAGGCCTTCCTTGCA+TGG | + | chr4.1:46484658-46484677 | MS.gene73640:intron | 55.0% | |
| CACTGGTGCACAAAGGACCA+AGG | + | chr4.1:46485053-46485072 | MS.gene73640:CDS | 55.0% | |
| CCGACACCAGTAGGTCTGTT+TGG | + | chr4.1:46483151-46483170 | MS.gene73640:intron | 55.0% | |
| GCACAAAGGACCAAGGCTGT+TGG | + | chr4.1:46485060-46485079 | MS.gene73640:CDS | 55.0% | |
| TGGAGCCTATAGCCGTGTTG+TGG | - | chr4.1:46484446-46484465 | None:intergenic | 55.0% | |
| GGCACAACACCGACACCAGT+AGG | + | chr4.1:46483142-46483161 | MS.gene73640:intron | 60.0% | |
| GGCACAGAAGCAGGCAGAAG+TGG | + | chr4.1:46486143-46486162 | MS.gene73640:CDS | 60.0% | |
| TACAGGGTCTGCATGGCCAG+TGG | - | chr4.1:46484072-46484091 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 46482287 | 46486395 | 46482287 | ID=MS.gene73640 |
| chr4.1 | mRNA | 46482287 | 46486395 | 46482287 | ID=MS.gene73640.t1;Parent=MS.gene73640 |
| chr4.1 | exon | 46482287 | 46482393 | 46482287 | ID=MS.gene73640.t1.exon1;Parent=MS.gene73640.t1 |
| chr4.1 | CDS | 46482287 | 46482393 | 46482287 | ID=cds.MS.gene73640.t1;Parent=MS.gene73640.t1 |
| chr4.1 | exon | 46483875 | 46484131 | 46483875 | ID=MS.gene73640.t1.exon2;Parent=MS.gene73640.t1 |
| chr4.1 | CDS | 46483875 | 46484131 | 46483875 | ID=cds.MS.gene73640.t1;Parent=MS.gene73640.t1 |
| chr4.1 | exon | 46484945 | 46485399 | 46484945 | ID=MS.gene73640.t1.exon3;Parent=MS.gene73640.t1 |
| chr4.1 | CDS | 46484945 | 46485399 | 46484945 | ID=cds.MS.gene73640.t1;Parent=MS.gene73640.t1 |
| chr4.1 | exon | 46486123 | 46486395 | 46486123 | ID=MS.gene73640.t1.exon4;Parent=MS.gene73640.t1 |
| chr4.1 | CDS | 46486123 | 46486395 | 46486123 | ID=cds.MS.gene73640.t1;Parent=MS.gene73640.t1 |
| Gene Sequence |
| Protein sequence |
