Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66676.t1 | XP_013455753.1 | 96.7 | 363 | 12 | 0 | 1 | 363 | 1 | 363 | 5.40E-202 | 713.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66676.t1 | Q54NS9 | 32.0 | 375 | 227 | 7 | 2 | 349 | 23 | 396 | 1.3e-42 | 175.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66676.t1 | A0A072UJ57 | 96.7 | 363 | 12 | 0 | 1 | 363 | 1 | 363 | 3.9e-202 | 713.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene66676 | 0.805274 | 1.44E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene66676 | 0.853626 | 2.11E-61 | -1.69E-46 |
| MS.gene049254 | MS.gene66676 | 0.801243 | 9.87E-49 | -1.69E-46 |
| MS.gene049255 | MS.gene66676 | 0.805975 | 1.03E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene66676 | 0.813126 | 3.00E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene66676 | 0.802368 | 5.80E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene66676 | 0.803917 | 2.77E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene66676 | 0.825947 | 3.55E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene66676 | 0.807766 | 4.31E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene66676 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene66676 | 0.829166 | 5.99E-55 | -1.69E-46 |
| MS.gene050808 | MS.gene66676 | 0.800051 | 1.73E-48 | -1.69E-46 |
| MS.gene050815 | MS.gene66676 | 0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene66676 | 0.80881 | 2.58E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene66676 | 0.802995 | 4.30E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene66676 | 0.824605 | 7.37E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene66676 | 0.828147 | 1.06E-54 | -1.69E-46 |
| MS.gene051328 | MS.gene66676 | 0.818775 | 1.64E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene66676 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene66676 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene051577 | MS.gene66676 | 0.80701 | 6.23E-50 | -1.69E-46 |
| MS.gene05215 | MS.gene66676 | 0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene66676 | 0.807997 | 3.85E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene66676 | 0.806304 | 8.78E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene66676 | 0.810118 | 1.35E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene66676 | 0.812967 | 3.25E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene66676 | 0.818355 | 2.05E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene66676 | 0.810946 | 8.95E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene66676 | 0.841787 | 3.85E-58 | -1.69E-46 |
| MS.gene053079 | MS.gene66676 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene66676 | 0.810565 | 1.08E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene66676 | 0.824414 | 8.18E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene66676 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene66676 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene054657 | MS.gene66676 | 0.858062 | 1.07E-62 | -1.69E-46 |
| MS.gene054658 | MS.gene66676 | 0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene66676 | 0.839969 | 1.15E-57 | -1.69E-46 |
| MS.gene05517 | MS.gene66676 | 0.841543 | 4.46E-58 | -1.69E-46 |
| MS.gene055512 | MS.gene66676 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene055608 | MS.gene66676 | 0.815393 | 9.46E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene66676 | 0.84612 | 2.65E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene66676 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene66676 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene66676 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene66676 | 0.81408 | 1.85E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene66676 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene056873 | MS.gene66676 | 0.804267 | 2.34E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene66676 | 0.806086 | 9.76E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene66676 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene66676 | 0.8194 | 1.18E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene66676 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene66676 | 0.82316 | 1.61E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene66676 | 0.845518 | 3.86E-59 | -1.69E-46 |
| MS.gene057915 | MS.gene66676 | 0.808956 | 2.40E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene66676 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene66676 | 0.808437 | 3.10E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene66676 | 0.806899 | 6.58E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene66676 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene66676 | 0.836868 | 7.27E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene66676 | 0.802024 | 6.83E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene66676 | 0.833866 | 4.17E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene66676 | 0.80629 | 8.84E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene66676 | 0.830628 | 2.64E-55 | -1.69E-46 |
| MS.gene05979 | MS.gene66676 | 0.809622 | 1.73E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene66676 | 0.817612 | 3.01E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene66676 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene66676 | 0.813597 | 2.36E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene66676 | 0.828049 | 1.12E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene66676 | 0.812415 | 4.29E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene66676 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene66676 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene66676 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene66676 | 0.835569 | 1.56E-56 | -1.69E-46 |
| MS.gene060998 | MS.gene66676 | 0.826143 | 3.19E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73640 | MS.gene66676 | PPI |
| MS.gene66676 | MS.gene73640 | PPI |
| MS.gene98633 | MS.gene66676 | PPI |
| MS.gene044749 | MS.gene66676 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66676.t1 | MTR_4g051645 | 96.694 | 363 | 12 | 0 | 1 | 363 | 1 | 363 | 0.0 | 731 |
| MS.gene66676.t1 | MTR_4g051622 | 68.820 | 356 | 109 | 2 | 6 | 360 | 3 | 357 | 0.0 | 508 |
| MS.gene66676.t1 | MTR_2g061440 | 78.571 | 70 | 15 | 0 | 141 | 210 | 193 | 262 | 3.97e-26 | 110 |
| MS.gene66676.t1 | MTR_4g091240 | 24.779 | 339 | 173 | 14 | 6 | 276 | 52 | 376 | 4.58e-11 | 64.7 |
| MS.gene66676.t1 | MTR_4g045993 | 25.305 | 328 | 174 | 12 | 7 | 272 | 48 | 366 | 8.56e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66676.t1 | AT5G22140 | 67.887 | 355 | 113 | 1 | 7 | 361 | 12 | 365 | 4.64e-178 | 499 |
| MS.gene66676.t1 | AT3G44190 | 65.730 | 356 | 121 | 1 | 7 | 362 | 12 | 366 | 4.08e-177 | 496 |
| MS.gene66676.t1 | AT3G44190 | 65.176 | 313 | 108 | 1 | 50 | 362 | 1 | 312 | 1.88e-152 | 432 |
| MS.gene66676.t1 | AT5G22140 | 66.026 | 312 | 105 | 1 | 50 | 361 | 1 | 311 | 8.49e-151 | 427 |
| MS.gene66676.t1 | AT5G08740 | 26.142 | 394 | 221 | 16 | 8 | 336 | 82 | 470 | 2.00e-12 | 68.6 |
Find 86 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTTTCACTCCTAATTT+TGG | 0.072580 | 4.3:-48282240 | None:intergenic |
| CAGACCCTGTACCCAAAATT+AGG | 0.314387 | 4.3:+48282228 | MS.gene66676:CDS |
| ATTCAAGTTTCTACAATATG+AGG | 0.339522 | 4.3:-48284512 | None:intergenic |
| GCTCGTTCCATTCTGATTGT+TGG | 0.351633 | 4.3:+48283102 | MS.gene66676:CDS |
| ATCATAGGTGGTGGTATTGC+TGG | 0.353406 | 4.3:+48280351 | MS.gene66676:CDS |
| GATAGTCATATGCAATCTTT+TGG | 0.353835 | 4.3:-48282184 | None:intergenic |
| ACGATAAGTGGAAGAATTCC+TGG | 0.370478 | 4.3:+48284431 | MS.gene66676:CDS |
| CTGCTGATAAGACTCTAAAA+TGG | 0.374188 | 4.3:+48283238 | MS.gene66676:CDS |
| TAGATGAAAACTTGAGAGTC+AGG | 0.392349 | 4.3:+48283469 | MS.gene66676:CDS |
| AACAAAATCTATCGAACTTC+AGG | 0.412309 | 4.3:+48283330 | MS.gene66676:CDS |
| TGGAGATATTACAAACATTC+CGG | 0.415600 | 4.3:+48283515 | MS.gene66676:CDS |
| GAATTCTTCCACTTATCGTT+AGG | 0.425584 | 4.3:-48284427 | None:intergenic |
| CGTTCCATTCTGATTGTTGG+AGG | 0.439915 | 4.3:+48283105 | MS.gene66676:CDS |
| AGATTACATGGGCAAGTTTG+AGG | 0.445110 | 4.3:+48282036 | MS.gene66676:CDS |
| TGGTAGAACAAGAAAACAAA+TGG | 0.450303 | 4.3:+48284481 | MS.gene66676:CDS |
| ATTGTTGGAGGAGGTCCTAC+TGG | 0.453795 | 4.3:+48283117 | MS.gene66676:CDS |
| CCTACTGGTGTAGAACTTGC+TGG | 0.457077 | 4.3:+48283132 | MS.gene66676:CDS |
| ATACAAACCACATTCGGTAT+TGG | 0.458786 | 4.3:+48284358 | MS.gene66676:CDS |
| AAGTCAGGAGATTTGTTTGT+TGG | 0.461404 | 4.3:+48284461 | MS.gene66676:CDS |
| TTGTGCACGGGAAAACCATT+TGG | 0.461944 | 4.3:+48283384 | MS.gene66676:CDS |
| TTGAGGGAGGTAAAGAATGT+TGG | 0.465885 | 4.3:+48284327 | MS.gene66676:CDS |
| TTCCGTCACATTAACAGCAC+TGG | 0.472573 | 4.3:-48282138 | None:intergenic |
| GACTATCTTGTTATTGCCAC+TGG | 0.472612 | 4.3:+48282200 | MS.gene66676:CDS |
| CACTGTTTAAGTCGACTGCT+TGG | 0.476065 | 4.3:-48283293 | None:intergenic |
| CCAAGGCTGTTGGAATTCAT+AGG | 0.479557 | 4.3:+48283207 | MS.gene66676:CDS |
| CATAGAGAGTACTTCACAAA+AGG | 0.482459 | 4.3:+48282101 | MS.gene66676:CDS |
| ATGGGCAAGTTTGAGGTCAA+TGG | 0.483082 | 4.3:+48282043 | MS.gene66676:CDS |
| TTGCCATTCCTAACGATAAG+TGG | 0.487177 | 4.3:+48284419 | MS.gene66676:CDS |
| GAAGAGCGAGTTGTTATCAT+AGG | 0.489090 | 4.3:+48280336 | MS.gene66676:CDS |
| ATTCCTGGCTACATCAAGTC+AGG | 0.489268 | 4.3:+48284446 | MS.gene66676:CDS |
| GGTAGAACAAGAAAACAAAT+GGG | 0.492449 | 4.3:+48284482 | MS.gene66676:CDS |
| ACCAGTGTAACCTTCTTATC+CGG | 0.492762 | 4.3:-48283174 | None:intergenic |
| TCCATTCTGATTGTTGGAGG+AGG | 0.499427 | 4.3:+48283108 | MS.gene66676:CDS |
| CTTCCACTTATCGTTAGGAA+TGG | 0.501735 | 4.3:-48284422 | None:intergenic |
| TCTCCTGACTTGATGTAGCC+AGG | 0.502581 | 4.3:-48284449 | None:intergenic |
| AGGGAGGTAAAGAATGTTGG+AGG | 0.511205 | 4.3:+48284330 | MS.gene66676:CDS |
| TATCAATGTCCTTTCTGCAA+AGG | 0.514570 | 4.3:-48282075 | None:intergenic |
| GCCGTCTGCAGTCAATACTT+CGG | 0.521568 | 4.3:-48282162 | None:intergenic |
| GGCACAGAAGCAGGCAGAAG+TGG | 0.522122 | 4.3:+48284280 | MS.gene66676:CDS |
| TTAAGCCATGACGAACCAAA+TGG | 0.523343 | 4.3:-48283399 | None:intergenic |
| AGATTGTCATTTCTTGTGCA+CGG | 0.527578 | 4.3:+48283371 | MS.gene66676:CDS |
| AACCTGCGGATGATGATTGA+GGG | 0.528603 | 4.3:+48284311 | MS.gene66676:CDS |
| GATTGTCATTTCTTGTGCAC+GGG | 0.534440 | 4.3:+48283372 | MS.gene66676:CDS |
| GGAAACATACAAACCACATT+CGG | 0.534598 | 4.3:+48284352 | MS.gene66676:CDS |
| GCACAAAGGACCAAGGCTGT+TGG | 0.547803 | 4.3:+48283197 | MS.gene66676:CDS |
| CTCCCTCAATCATCATCCGC+AGG | 0.549407 | 4.3:-48284313 | None:intergenic |
| CCTATGAATTCCAACAGCCT+TGG | 0.554290 | 4.3:-48283207 | None:intergenic |
| GAAAACCATTTGGTTCGTCA+TGG | 0.555238 | 4.3:+48283394 | MS.gene66676:CDS |
| ACTATTGCCAATACCGAATG+TGG | 0.556477 | 4.3:-48284365 | None:intergenic |
| ACCTCCTCCAACAATCAGAA+TGG | 0.560963 | 4.3:-48283109 | None:intergenic |
| AATGTCCTTTCTGCAAAGGA+TGG | 0.563728 | 4.3:-48282071 | None:intergenic |
| GAAATGACAATCTGCTTCGA+TGG | 0.564040 | 4.3:-48283361 | None:intergenic |
| TGGCAATAGTTTCACTTGGG+AGG | 0.566676 | 4.3:+48284378 | MS.gene66676:CDS |
| TTCAAGTTTCTACAATATGA+GGG | 0.567555 | 4.3:-48284511 | None:intergenic |
| GGATGTTCAGGGGATGATCA+AGG | 0.567739 | 4.3:+48283446 | MS.gene66676:CDS |
| CGAGTTGTTATCATAGGTGG+TGG | 0.569292 | 4.3:+48280342 | MS.gene66676:CDS |
| GAACCTGCGGATGATGATTG+AGG | 0.569915 | 4.3:+48284310 | MS.gene66676:CDS |
| TGGAACCATCCTTTGCAGAA+AGG | 0.578477 | 4.3:+48282066 | MS.gene66676:CDS |
| AAAATCTATCGAACTTCAGG+AGG | 0.584727 | 4.3:+48283333 | MS.gene66676:CDS |
| ACCGAAGTATTGACTGCAGA+CGG | 0.586673 | 4.3:+48282161 | MS.gene66676:CDS |
| TCCGGATAAGAAGGTTACAC+TGG | 0.588992 | 4.3:+48283173 | MS.gene66676:CDS |
| GTATTGGCAATAGTTTCACT+TGG | 0.592229 | 4.3:+48284374 | MS.gene66676:CDS |
| ATACAACAGGAAATCAAGCA+AGG | 0.593247 | 4.3:+48284251 | MS.gene66676:intron |
| GAGCGAGTTGTTATCATAGG+TGG | 0.596638 | 4.3:+48280339 | MS.gene66676:CDS |
| AGATGAAAACTTGAGAGTCA+GGG | 0.597572 | 4.3:+48283470 | MS.gene66676:CDS |
| TACAGGGTCTGCATGGCCAG+TGG | 0.598096 | 4.3:-48282216 | None:intergenic |
| GACTTAAACAGTGACACAGA+TGG | 0.600678 | 4.3:+48283303 | MS.gene66676:CDS |
| ATCCAGTGCTGTTAATGTGA+CGG | 0.604022 | 4.3:+48282136 | MS.gene66676:CDS |
| TATTGGCAATAGTTTCACTT+GGG | 0.604816 | 4.3:+48284375 | MS.gene66676:CDS |
| GGCAAGTTTGAGGTCAATGG+TGG | 0.607275 | 4.3:+48282046 | MS.gene66676:CDS |
| AAATCTATCGAACTTCAGGA+GGG | 0.621050 | 4.3:+48283334 | MS.gene66676:CDS |
| TACAACAGGAAATCAAGCAA+GGG | 0.622339 | 4.3:+48284252 | MS.gene66676:intron |
| CCAGCAAGTTCTACACCAGT+AGG | 0.629097 | 4.3:-48283132 | None:intergenic |
| AAAACTTGAGAGTCAGGGGT+CGG | 0.629348 | 4.3:+48283475 | MS.gene66676:CDS |
| GTTGAAATCTAATAATGTTG+AGG | 0.636675 | 4.3:+48283260 | MS.gene66676:CDS |
| AATCTATCGAACTTCAGGAG+GGG | 0.640518 | 4.3:+48283335 | MS.gene66676:CDS |
| CACTGGTGCACAAAGGACCA+AGG | 0.656142 | 4.3:+48283190 | MS.gene66676:CDS |
| GGGAGGTAAAGAATGTTGGA+GGG | 0.657144 | 4.3:+48284331 | MS.gene66676:CDS |
| TAACAGCACTGGATGTAACA+AGG | 0.659638 | 4.3:-48282127 | None:intergenic |
| AGAATAATTACGGATCAATG+AGG | 0.662291 | 4.3:-48280416 | None:intergenic |
| GATGAAAACTTGAGAGTCAG+GGG | 0.673851 | 4.3:+48283471 | MS.gene66676:CDS |
| AAGGTTACACTGGTGCACAA+AGG | 0.685956 | 4.3:+48283183 | MS.gene66676:CDS |
| CTGCGGATGATGATTGAGGG+AGG | 0.694557 | 4.3:+48284314 | MS.gene66676:CDS |
| GTAGAACAAGAAAACAAATG+GGG | 0.698957 | 4.3:+48284483 | MS.gene66676:CDS |
| AAGTGGTTGTGAAGAACCTG+CGG | 0.700289 | 4.3:+48284297 | MS.gene66676:CDS |
| AAAATGACTTGGATGTTCAG+GGG | 0.703696 | 4.3:+48283436 | MS.gene66676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTAGATAATAAAGCA+TGG | - | chr4.3:48283923-48283942 | None:intergenic | 15.0% |
| !! | AGAATTCATCAATATAAAAA+AGG | + | chr4.3:48282257-48282276 | MS.gene66676:CDS | 15.0% |
| !! | TATAGTATTCGTTAAATAAT+AGG | + | chr4.3:48282845-48282864 | MS.gene66676:intron | 15.0% |
| !! | TATCTATTAACATAAACATT+TGG | + | chr4.3:48281316-48281335 | MS.gene66676:intron | 15.0% |
| !! | TATGTGATAAATACTTATAA+GGG | + | chr4.3:48280855-48280874 | MS.gene66676:intron | 15.0% |
| !! | TTATGTGATAAATACTTATA+AGG | + | chr4.3:48280854-48280873 | MS.gene66676:intron | 15.0% |
| !! | TTTGTATAACCATAATAAAA+AGG | - | chr4.3:48281806-48281825 | None:intergenic | 15.0% |
| !!! | ACATAAGTACTTATTTTTAA+TGG | - | chr4.3:48280840-48280859 | None:intergenic | 15.0% |
| !!! | ATGTTTTAACCTTTTTATTA+TGG | + | chr4.3:48281794-48281813 | MS.gene66676:intron | 15.0% |
| !!! | CATAAGTACTTATTTTTAAT+GGG | - | chr4.3:48280839-48280858 | None:intergenic | 15.0% |
| !!! | CTTTAATTTTCTGAAAATTT+AGG | - | chr4.3:48281834-48281853 | None:intergenic | 15.0% |
| !! | AAAATTCCAAAAACACAAAA+GGG | - | chr4.3:48280516-48280535 | None:intergenic | 20.0% |
| !! | AAAATTGAAACTTTCAAAAC+TGG | - | chr4.3:48280558-48280577 | None:intergenic | 20.0% |
| !! | AAATTGAAACTTTCAAAACT+GGG | - | chr4.3:48280557-48280576 | None:intergenic | 20.0% |
| !! | AATAACCAATACAATAACAA+GGG | - | chr4.3:48280904-48280923 | None:intergenic | 20.0% |
| !! | ATAATATCATAAACACTGAA+AGG | - | chr4.3:48282392-48282411 | None:intergenic | 20.0% |
| !! | ATTAATGTAAAATGAATGAG+AGG | + | chr4.3:48283979-48283998 | MS.gene66676:intron | 20.0% |
| !! | ATTTGAACTTATAAGTACTT+TGG | + | chr4.3:48280625-48280644 | MS.gene66676:intron | 20.0% |
| !! | GAAAGAAGAAAGAATAATTA+CGG | - | chr4.3:48280429-48280448 | None:intergenic | 20.0% |
| !! | TAAAATTCCAAAAACACAAA+AGG | - | chr4.3:48280517-48280536 | None:intergenic | 20.0% |
| !! | TAAAGAGATTAAAATGCAAT+AGG | - | chr4.3:48284195-48284214 | None:intergenic | 20.0% |
| !! | TAATAACCAATACAATAACA+AGG | - | chr4.3:48280905-48280924 | None:intergenic | 20.0% |
| !!! | AAATTAGTCTCAGTTATTTT+GGG | - | chr4.3:48282911-48282930 | None:intergenic | 20.0% |
| !!! | CTTTTTAGCTTATTTGTAAA+CGG | + | chr4.3:48280696-48280715 | MS.gene66676:intron | 20.0% |
| !!! | GAAAAGTGTGTTTTTTTTTT+TGG | + | chr4.3:48281133-48281152 | MS.gene66676:intron | 20.0% |
| !!! | TATGGAATAGATTCATTTTA+TGG | + | chr4.3:48283002-48283021 | MS.gene66676:intron | 20.0% |
| !!! | TGTGTTTTTTTTTTTGGAAA+TGG | + | chr4.3:48281139-48281158 | MS.gene66676:intron | 20.0% |
| !!! | TTTTCAGAAAATTAAAGTCA+TGG | + | chr4.3:48281837-48281856 | MS.gene66676:intron | 20.0% |
| !!! | TTTTGAAAGTTTCAATTTTG+AGG | + | chr4.3:48280559-48280578 | MS.gene66676:intron | 20.0% |
| ! | AAAAGCCTATATTGTTTGTT+TGG | + | chr4.3:48280752-48280771 | MS.gene66676:intron | 25.0% |
| ! | AAAATGCAATAGGTTTATAG+CGG | - | chr4.3:48284185-48284204 | None:intergenic | 25.0% |
| ! | AAATTCCAATTAGACATGAA+AGG | - | chr4.3:48281036-48281055 | None:intergenic | 25.0% |
| ! | AATTGAATTCAATTGAATCC+AGG | + | chr4.3:48282000-48282019 | MS.gene66676:intron | 25.0% |
| ! | AGTAAATTGTTTATCCAAAC+AGG | - | chr4.3:48281344-48281363 | None:intergenic | 25.0% |
| ! | GGATTCAATTGAATTCAATT+AGG | - | chr4.3:48282000-48282019 | None:intergenic | 25.0% |
| ! | GTAAATTGTTTATCCAAACA+GGG | - | chr4.3:48281343-48281362 | None:intergenic | 25.0% |
| ! | GTTGAAATCTAATAATGTTG+AGG | + | chr4.3:48283260-48283279 | MS.gene66676:CDS | 25.0% |
| ! | TACATTAATACCTTCATCAT+TGG | - | chr4.3:48283968-48283987 | None:intergenic | 25.0% |
| ! | TAGTACAAAGTGATGTAAAA+TGG | - | chr4.3:48282613-48282632 | None:intergenic | 25.0% |
| ! | TCAAACATAGCTTATGAAAA+TGG | - | chr4.3:48281668-48281687 | None:intergenic | 25.0% |
| ! | TCAAATACGTCAATCTAAAT+AGG | + | chr4.3:48283842-48283861 | MS.gene66676:intron | 25.0% |
| !! | AATTCTTTCACTCCTAATTT+TGG | - | chr4.3:48282243-48282262 | None:intergenic | 25.0% |
| !! | ATTCTTTCACTCCTAATTTT+GGG | - | chr4.3:48282242-48282261 | None:intergenic | 25.0% |
| !! | GTGTATTGTGAATGATTTTA+TGG | + | chr4.3:48282984-48283003 | MS.gene66676:intron | 25.0% |
| !!! | AAGTTGTTTTCATAAGCTTT+CGG | - | chr4.3:48280667-48280686 | None:intergenic | 25.0% |
| !!! | AGGAATATTTTGAGATTACA+TGG | + | chr4.3:48282024-48282043 | MS.gene66676:CDS | 25.0% |
| !!! | CAAATTAGTCTCAGTTATTT+TGG | - | chr4.3:48282912-48282931 | None:intergenic | 25.0% |
| !!! | GCTATTTCTTTAACAAAAGA+TGG | - | chr4.3:48281743-48281762 | None:intergenic | 25.0% |
| !!! | GGAATATTTTGAGATTACAT+GGG | + | chr4.3:48282025-48282044 | MS.gene66676:CDS | 25.0% |
| !!! | GTTTTCAAGTTTCAATTTTG+AGG | + | chr4.3:48281108-48281127 | MS.gene66676:intron | 25.0% |
| !!! | TGAACATATGTTTGTTTTGA+CGG | + | chr4.3:48282444-48282463 | MS.gene66676:intron | 25.0% |
| !!! | TGTATTGGTTATTATTGAAG+TGG | + | chr4.3:48280911-48280930 | MS.gene66676:intron | 25.0% |
| AACAAAATCTATCGAACTTC+AGG | + | chr4.3:48283330-48283349 | MS.gene66676:CDS | 30.0% | |
| AACAGTTTCAAGGATCTATT+TGG | - | chr4.3:48281612-48281631 | None:intergenic | 30.0% | |
| AACTGTGTTGAAAAATGACT+TGG | + | chr4.3:48283425-48283444 | MS.gene66676:CDS | 30.0% | |
| AATAGATCCTTGAAACTGTT+TGG | + | chr4.3:48281612-48281631 | MS.gene66676:intron | 30.0% | |
| AATCTCAAAATATTCCTTCC+TGG | - | chr4.3:48282021-48282040 | None:intergenic | 30.0% | |
| AGAATAATTACGGATCAATG+AGG | - | chr4.3:48280419-48280438 | None:intergenic | 30.0% | |
| ATGCAAACACTAAAATCAGT+AGG | - | chr4.3:48284098-48284117 | None:intergenic | 30.0% | |
| CCATTAAGAAATAAACCATC+AGG | - | chr4.3:48284225-48284244 | None:intergenic | 30.0% | |
| CTTCAATGTAAATGTATGGT+GGG | - | chr4.3:48282480-48282499 | None:intergenic | 30.0% | |
| GATTCATTTCATACCATGTA+AGG | - | chr4.3:48282821-48282840 | None:intergenic | 30.0% | |
| GGTAGAACAAGAAAACAAAT+GGG | + | chr4.3:48284482-48284501 | MS.gene66676:CDS | 30.0% | |
| GTAGAACAAGAAAACAAATG+GGG | + | chr4.3:48284483-48284502 | MS.gene66676:CDS | 30.0% | |
| GTAGTCCAAACAAACAATAT+AGG | - | chr4.3:48280760-48280779 | None:intergenic | 30.0% | |
| GTATGTAATCACAAGTGTTA+GGG | + | chr4.3:48281859-48281878 | MS.gene66676:intron | 30.0% | |
| TATTGGCAATAGTTTCACTT+GGG | + | chr4.3:48284375-48284394 | MS.gene66676:CDS | 30.0% | |
| TGGAGATATTACAAACATTC+CGG | + | chr4.3:48283515-48283534 | MS.gene66676:CDS | 30.0% | |
| TGGTAGAACAAGAAAACAAA+TGG | + | chr4.3:48284481-48284500 | MS.gene66676:CDS | 30.0% | |
| TTTCAAGGATCTATTTGGAT+TGG | - | chr4.3:48281607-48281626 | None:intergenic | 30.0% | |
| TTTGTTTGGACTACTTAATC+CGG | + | chr4.3:48280766-48280785 | MS.gene66676:intron | 30.0% | |
| ! | AAAAATGACTTGGATGTTCA+GGG | + | chr4.3:48283435-48283454 | MS.gene66676:CDS | 30.0% |
| ! | AAAGTCTTTTAAACTCGTGA+TGG | - | chr4.3:48282726-48282745 | None:intergenic | 30.0% |
| ! | ACTGTTTTCATAAGCTATCT+TGG | + | chr4.3:48283751-48283770 | MS.gene66676:intron | 30.0% |
| ! | ATAAGTATTGTGAGACTGTT+TGG | - | chr4.3:48281560-48281579 | None:intergenic | 30.0% |
| ! | CCTGATGGTTTATTTCTTAA+TGG | + | chr4.3:48284222-48284241 | MS.gene66676:intron | 30.0% |
| ! | GAAGAAACTCAAGTATTGTT+TGG | - | chr4.3:48282752-48282771 | None:intergenic | 30.0% |
| ! | GATAGTCATATGCAATCTTT+TGG | - | chr4.3:48282187-48282206 | None:intergenic | 30.0% |
| ! | GATATACCCTTTTGTGTTTT+TGG | + | chr4.3:48280507-48280526 | MS.gene66676:intron | 30.0% |
| ! | TAAGTATTGTGAGACTGTTT+GGG | - | chr4.3:48281559-48281578 | None:intergenic | 30.0% |
| !! | AATCTTTAAAGTTCACTGCA+AGG | + | chr4.3:48282791-48282810 | MS.gene66676:intron | 30.0% |
| !! | TTAATGGACTTCAATACAAC+AGG | + | chr4.3:48284238-48284257 | MS.gene66676:intron | 30.0% |
| !!! | TAGTTAGTTTTCCATGCATA+TGG | + | chr4.3:48281942-48281961 | MS.gene66676:intron | 30.0% |
| AAAATCTATCGAACTTCAGG+AGG | + | chr4.3:48283333-48283352 | MS.gene66676:CDS | 35.0% | |
| AAACACTTGTGAGACTGTTT+GGG | - | chr4.3:48283806-48283825 | None:intergenic | 35.0% | |
| AAACTGTTTGGAAGAGGTTA+TGG | + | chr4.3:48281624-48281643 | MS.gene66676:intron | 35.0% | |
| AAATCTATCGAACTTCAGGA+GGG | + | chr4.3:48283334-48283353 | MS.gene66676:CDS | 35.0% | |
| AATTGCTTAGCCAATCTTTG+AGG | + | chr4.3:48282412-48282431 | MS.gene66676:intron | 35.0% | |
| AGATGAAAACTTGAGAGTCA+GGG | + | chr4.3:48283470-48283489 | MS.gene66676:CDS | 35.0% | |
| AGTCTACTATCCTCAAAGAT+TGG | - | chr4.3:48282425-48282444 | None:intergenic | 35.0% | |
| ATAAACATTTGGACCCTGTT+TGG | + | chr4.3:48281327-48281346 | MS.gene66676:intron | 35.0% | |
| ATACAAACCACATTCGGTAT+TGG | + | chr4.3:48284358-48284377 | MS.gene66676:CDS | 35.0% | |
| ATACAACAGGAAATCAAGCA+AGG | + | chr4.3:48284251-48284270 | MS.gene66676:intron | 35.0% | |
| ATGATACCAAGAATGCAGAA+GGG | - | chr4.3:48281065-48281084 | None:intergenic | 35.0% | |
| CAATGAGGAACACACATAAT+TGG | - | chr4.3:48283887-48283906 | None:intergenic | 35.0% | |
| CACGGATAGTAAAAAAACAG+TGG | + | chr4.3:48282539-48282558 | MS.gene66676:intron | 35.0% | |
| CATTTCATACCATGTAAGGA+AGG | - | chr4.3:48282817-48282836 | None:intergenic | 35.0% | |
| GAATTCAATTGAATCCAGGA+AGG | + | chr4.3:48282004-48282023 | MS.gene66676:intron | 35.0% | |
| GAATTCTTCCACTTATCGTT+AGG | - | chr4.3:48284430-48284449 | None:intergenic | 35.0% | |
| GAGAACCTTTCATGTCTAAT+TGG | + | chr4.3:48281028-48281047 | MS.gene66676:intron | 35.0% | |
| GCTTCAATGTAAATGTATGG+TGG | - | chr4.3:48282481-48282500 | None:intergenic | 35.0% | |
| GGAAACATACAAACCACATT+CGG | + | chr4.3:48284352-48284371 | MS.gene66676:CDS | 35.0% | |
| GGAGCTTCAATGTAAATGTA+TGG | - | chr4.3:48282484-48282503 | None:intergenic | 35.0% | |
| GGTATGTAATCACAAGTGTT+AGG | + | chr4.3:48281858-48281877 | MS.gene66676:intron | 35.0% | |
| GTCTGTTTGGATTGAGTTAT+TGG | + | chr4.3:48281289-48281308 | MS.gene66676:intron | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | - | chr4.3:48283807-48283826 | None:intergenic | 35.0% | |
| TAATTGTGTGTGTGAGTTTC+AGG | + | chr4.3:48280796-48280815 | MS.gene66676:intron | 35.0% | |
| TACAACAGGAAATCAAGCAA+GGG | + | chr4.3:48284252-48284271 | MS.gene66676:intron | 35.0% | |
| TACAATAACAAGGGTCTGTT+TGG | - | chr4.3:48280895-48280914 | None:intergenic | 35.0% | |
| TAGATGAAAACTTGAGAGTC+AGG | + | chr4.3:48283469-48283488 | MS.gene66676:CDS | 35.0% | |
| TATCAATGTCCTTTCTGCAA+AGG | - | chr4.3:48282078-48282097 | None:intergenic | 35.0% | |
| TGAAACTCACACACACAATT+AGG | - | chr4.3:48280797-48280816 | None:intergenic | 35.0% | |
| TTCTTCCTTTGAACTCATGT+AGG | + | chr4.3:48282766-48282785 | MS.gene66676:intron | 35.0% | |
| TTGTACTACACCATGTAATG+CGG | + | chr4.3:48282625-48282644 | MS.gene66676:intron | 35.0% | |
| TTGTTTGGACTACTTAATCC+GGG | + | chr4.3:48280767-48280786 | MS.gene66676:intron | 35.0% | |
| ! | AAAATGACTTGGATGTTCAG+GGG | + | chr4.3:48283436-48283455 | MS.gene66676:CDS | 35.0% |
| ! | AAGTCAGGAGATTTGTTTGT+TGG | + | chr4.3:48284461-48284480 | MS.gene66676:CDS | 35.0% |
| ! | AGATTGTCATTTCTTGTGCA+CGG | + | chr4.3:48283371-48283390 | MS.gene66676:CDS | 35.0% |
| ! | ATGAAAGGTTCTCTTGCTAT+GGG | - | chr4.3:48281021-48281040 | None:intergenic | 35.0% |
| ! | ATGAGAGGTACAATATGTAC+TGG | + | chr4.3:48283994-48284013 | MS.gene66676:intron | 35.0% |
| ! | ATTAGCCTACATGAGTTCAA+AGG | - | chr4.3:48282774-48282793 | None:intergenic | 35.0% |
| ! | CTGCTGATAAGACTCTAAAA+TGG | + | chr4.3:48283238-48283257 | MS.gene66676:CDS | 35.0% |
| ! | GAAAAATGACTTGGATGTTC+AGG | + | chr4.3:48283434-48283453 | MS.gene66676:CDS | 35.0% |
| ! | GGGTTCTAATATTTCTTCCA+TGG | - | chr4.3:48282891-48282910 | None:intergenic | 35.0% |
| ! | GTATTGGCAATAGTTTCACT+TGG | + | chr4.3:48284374-48284393 | MS.gene66676:CDS | 35.0% |
| !! | ACAGACCCTTGTTATTGTAT+TGG | + | chr4.3:48280896-48280915 | MS.gene66676:intron | 35.0% |
| !! | CATAGAGAGTACTTCACAAA+AGG | + | chr4.3:48282101-48282120 | MS.gene66676:CDS | 35.0% |
| !! | CTTTTGTGAAGTACTCTCTA+TGG | - | chr4.3:48282103-48282122 | None:intergenic | 35.0% |
| !! | GAAAAAACAGAAGCACTTAC+CGG | - | chr4.3:48283537-48283556 | None:intergenic | 35.0% |
| !!! | AGAGATAGCTGTTGATTTTC+CGG | + | chr4.3:48283155-48283174 | MS.gene66676:CDS | 35.0% |
| !!! | TGTTGATTTTCCGGATAAGA+AGG | + | chr4.3:48283164-48283183 | MS.gene66676:CDS | 35.0% |
| AACTCACACACACAATTAGG+AGG | - | chr4.3:48280794-48280813 | None:intergenic | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | chr4.3:48283762-48283781 | MS.gene66676:intron | 40.0% | |
| AATCTATCGAACTTCAGGAG+GGG | + | chr4.3:48283335-48283354 | MS.gene66676:CDS | 40.0% | |
| AATGTCCTTTCTGCAAAGGA+TGG | - | chr4.3:48282074-48282093 | None:intergenic | 40.0% | |
| ACACTGAAAGGCGATCATTA+TGG | - | chr4.3:48282380-48282399 | None:intergenic | 40.0% | |
| ACCAGTGTAACCTTCTTATC+CGG | - | chr4.3:48283177-48283196 | None:intergenic | 40.0% | |
| ACCTCTTCCAAACAGTTTCA+AGG | - | chr4.3:48281622-48281641 | None:intergenic | 40.0% | |
| ACGATAAGTGGAAGAATTCC+TGG | + | chr4.3:48284431-48284450 | MS.gene66676:CDS | 40.0% | |
| ACTATTGCCAATACCGAATG+TGG | - | chr4.3:48284368-48284387 | None:intergenic | 40.0% | |
| AGATTACATGGGCAAGTTTG+AGG | + | chr4.3:48282036-48282055 | MS.gene66676:CDS | 40.0% | |
| ATGAAAGGCAAGCTACTAGT+TGG | - | chr4.3:48282505-48282524 | None:intergenic | 40.0% | |
| CATAGCACACTCAACTCAAT+AGG | + | chr4.3:48283592-48283611 | MS.gene66676:intron | 40.0% | |
| CATGAAAGGTTCTCTTGCTA+TGG | - | chr4.3:48281022-48281041 | None:intergenic | 40.0% | |
| CATGATACCAAGAATGCAGA+AGG | - | chr4.3:48281066-48281085 | None:intergenic | 40.0% | |
| CATGTAATGCGGAACAATAG+AGG | + | chr4.3:48282636-48282655 | MS.gene66676:intron | 40.0% | |
| CGGAGAGTCAAAGTTTACAT+AGG | - | chr4.3:48284165-48284184 | None:intergenic | 40.0% | |
| CTCTATTGTTCCGCATTACA+TGG | - | chr4.3:48282638-48282657 | None:intergenic | 40.0% | |
| CTTCCACTTATCGTTAGGAA+TGG | - | chr4.3:48284425-48284444 | None:intergenic | 40.0% | |
| GAAATGACAATCTGCTTCGA+TGG | - | chr4.3:48283364-48283383 | None:intergenic | 40.0% | |
| GAAGAGCGAGTTGTTATCAT+AGG | + | chr4.3:48280336-48280355 | MS.gene66676:CDS | 40.0% | |
| GACTTAAACAGTGACACAGA+TGG | + | chr4.3:48283303-48283322 | MS.gene66676:CDS | 40.0% | |
| GAGTTGAGTGTGCTATGAAA+GGG | - | chr4.3:48283589-48283608 | None:intergenic | 40.0% | |
| GATGAAAACTTGAGAGTCAG+GGG | + | chr4.3:48283471-48283490 | MS.gene66676:CDS | 40.0% | |
| GATTGACAACACTGGATGAA+AGG | - | chr4.3:48282520-48282539 | None:intergenic | 40.0% | |
| GGCGATCATTATGGTATTGT+AGG | - | chr4.3:48282371-48282390 | None:intergenic | 40.0% | |
| GTGGTTACGTATACAAAGAG+TGG | - | chr4.3:48283565-48283584 | None:intergenic | 40.0% | |
| GTTCTACTCACCAATGATGA+AGG | + | chr4.3:48283955-48283974 | MS.gene66676:intron | 40.0% | |
| TCATCCAGTGTTGTCAATCA+CGG | + | chr4.3:48282521-48282540 | MS.gene66676:intron | 40.0% | |
| TCCATGGTGATACAAGAAGT+CGG | - | chr4.3:48282875-48282894 | None:intergenic | 40.0% | |
| TCCTTGAAACTGTTTGGAAG+AGG | + | chr4.3:48281618-48281637 | MS.gene66676:intron | 40.0% | |
| TCTCTTTACAAGCTTCCTGA+TGG | + | chr4.3:48284207-48284226 | MS.gene66676:intron | 40.0% | |
| TGTTTACCCTTCTGCATTCT+TGG | + | chr4.3:48281056-48281075 | MS.gene66676:intron | 40.0% | |
| TTAAGCCATGACGAACCAAA+TGG | - | chr4.3:48283402-48283421 | None:intergenic | 40.0% | |
| TTGAGGGAGGTAAAGAATGT+TGG | + | chr4.3:48284327-48284346 | MS.gene66676:CDS | 40.0% | |
| TTGCCATTCCTAACGATAAG+TGG | + | chr4.3:48284419-48284438 | MS.gene66676:CDS | 40.0% | |
| TTTAGTGTTTGCATTCCTCG+AGG | + | chr4.3:48284104-48284123 | MS.gene66676:intron | 40.0% | |
| TTTCTATGATGCACAGACAC+AGG | + | chr4.3:48281246-48281265 | MS.gene66676:intron | 40.0% | |
| ! | ATCCAGTGCTGTTAATGTGA+CGG | + | chr4.3:48282136-48282155 | MS.gene66676:CDS | 40.0% |
| ! | ATTGGAGCATCACAAGACTA+AGG | - | chr4.3:48283869-48283888 | None:intergenic | 40.0% |
| ! | CGGAACAACATTTTTGCAGT+TGG | + | chr4.3:48283495-48283514 | MS.gene66676:CDS | 40.0% |
| ! | GAAAACCATTTGGTTCGTCA+TGG | + | chr4.3:48283394-48283413 | MS.gene66676:CDS | 40.0% |
| ! | GAGGTACAATATGTACTGGT+TGG | + | chr4.3:48283998-48284017 | MS.gene66676:intron | 40.0% |
| ! | GATTGTCATTTCTTGTGCAC+GGG | + | chr4.3:48283372-48283391 | MS.gene66676:CDS | 40.0% |
| ! | GGAAATCAAGCAAGGGTTTT+TGG | + | chr4.3:48284259-48284278 | MS.gene66676:intron | 40.0% |
| ! | GGTCTCAGTTTAGTTCAATG+AGG | - | chr4.3:48283902-48283921 | None:intergenic | 40.0% |
| ! | TAACAGCACTGGATGTAACA+AGG | - | chr4.3:48282130-48282149 | None:intergenic | 40.0% |
| ! | TGAGTTGAGTGTGCTATGAA+AGG | - | chr4.3:48283590-48283609 | None:intergenic | 40.0% |
| ! | TTGGAGCATCACAAGACTAA+GGG | - | chr4.3:48283868-48283887 | None:intergenic | 40.0% |
| !! | CACTCCTAATTTTGGGTACA+GGG | - | chr4.3:48282235-48282254 | None:intergenic | 40.0% |
| !! | GACTATCTTGTTATTGCCAC+TGG | + | chr4.3:48282200-48282219 | MS.gene66676:CDS | 40.0% |
| !! | TATGTACTGGTTGGTACTAC+AGG | + | chr4.3:48284007-48284026 | MS.gene66676:intron | 40.0% |
| !! | TCACTCCTAATTTTGGGTAC+AGG | - | chr4.3:48282236-48282255 | None:intergenic | 40.0% |
| AAAACTTGAGAGTCAGGGGT+CGG | + | chr4.3:48283475-48283494 | MS.gene66676:CDS | 45.0% | |
| AAGGTTACACTGGTGCACAA+AGG | + | chr4.3:48283183-48283202 | MS.gene66676:CDS | 45.0% | |
| AAGTGGTTGTGAAGAACCTG+CGG | + | chr4.3:48284297-48284316 | MS.gene66676:CDS | 45.0% | |
| ACCTCCTCCAACAATCAGAA+TGG | - | chr4.3:48283112-48283131 | None:intergenic | 45.0% | |
| AGGGAGGTAAAGAATGTTGG+AGG | + | chr4.3:48284330-48284349 | MS.gene66676:CDS | 45.0% | |
| AGTATAGCTTTCTGTGCACG+TGG | + | chr4.3:48280976-48280995 | MS.gene66676:intron | 45.0% | |
| ATGGTGATACAAGAAGTCGG+TGG | - | chr4.3:48282872-48282891 | None:intergenic | 45.0% | |
| ATGTGTACATAAGCACCTCG+AGG | - | chr4.3:48284122-48284141 | None:intergenic | 45.0% | |
| ATTCCTGGCTACATCAAGTC+AGG | + | chr4.3:48284446-48284465 | MS.gene66676:CDS | 45.0% | |
| CAATTCGACAGCCATATGCA+TGG | - | chr4.3:48281956-48281975 | None:intergenic | 45.0% | |
| CACTGTTTAAGTCGACTGCT+TGG | - | chr4.3:48283296-48283315 | None:intergenic | 45.0% | |
| CAGACCCTGTACCCAAAATT+AGG | + | chr4.3:48282228-48282247 | MS.gene66676:CDS | 45.0% | |
| CCAAGGCTGTTGGAATTCAT+AGG | + | chr4.3:48283207-48283226 | MS.gene66676:CDS | 45.0% | |
| CCTATGAATTCCAACAGCCT+TGG | - | chr4.3:48283210-48283229 | None:intergenic | 45.0% | |
| CGAGTTGTTATCATAGGTGG+TGG | + | chr4.3:48280342-48280361 | MS.gene66676:CDS | 45.0% | |
| CGTTCCATTCTGATTGTTGG+AGG | + | chr4.3:48283105-48283124 | MS.gene66676:CDS | 45.0% | |
| CTATCCGTGATTGACAACAC+TGG | - | chr4.3:48282528-48282547 | None:intergenic | 45.0% | |
| CTCAACTCAATAGGTTGCTC+AGG | + | chr4.3:48283601-48283620 | MS.gene66676:intron | 45.0% | |
| CTCAATCCAAACAGACCTAC+TGG | - | chr4.3:48281285-48281304 | None:intergenic | 45.0% | |
| GAGCGAGTTGTTATCATAGG+TGG | + | chr4.3:48280339-48280358 | MS.gene66676:CDS | 45.0% | |
| GCTCGTTCCATTCTGATTGT+TGG | + | chr4.3:48283102-48283121 | MS.gene66676:CDS | 45.0% | |
| GGGAGGTAAAGAATGTTGGA+GGG | + | chr4.3:48284331-48284350 | MS.gene66676:CDS | 45.0% | |
| TCCATTCTGATTGTTGGAGG+AGG | + | chr4.3:48283108-48283127 | MS.gene66676:CDS | 45.0% | |
| TCCGGATAAGAAGGTTACAC+TGG | + | chr4.3:48283173-48283192 | MS.gene66676:CDS | 45.0% | |
| TGCACTACAATGCCACAACA+CGG | + | chr4.3:48282578-48282597 | MS.gene66676:intron | 45.0% | |
| TGGAACCATCCTTTGCAGAA+AGG | + | chr4.3:48282066-48282085 | MS.gene66676:CDS | 45.0% | |
| TGGCAATAGTTTCACTTGGG+AGG | + | chr4.3:48284378-48284397 | MS.gene66676:CDS | 45.0% | |
| TTCAGGTGGTGATTGTCTAC+TGG | + | chr4.3:48280813-48280832 | MS.gene66676:intron | 45.0% | |
| TTCCGTCACATTAACAGCAC+TGG | - | chr4.3:48282141-48282160 | None:intergenic | 45.0% | |
| TTGTGCACGGGAAAACCATT+TGG | + | chr4.3:48283384-48283403 | MS.gene66676:CDS | 45.0% | |
| TTGTGTGTGTGAGTTTCAGG+TGG | + | chr4.3:48280799-48280818 | MS.gene66676:intron | 45.0% | |
| TTTGAATGTCCGACACGTGT+TGG | - | chr4.3:48281892-48281911 | None:intergenic | 45.0% | |
| ! | ACCGACTTCTTGTATCACCA+TGG | + | chr4.3:48282871-48282890 | MS.gene66676:intron | 45.0% |
| ! | AGGCTTTTGTCAGTTGAGCT+AGG | - | chr4.3:48280740-48280759 | None:intergenic | 45.0% |
| ! | ATCATAGGTGGTGGTATTGC+TGG | + | chr4.3:48280351-48280370 | MS.gene66676:CDS | 45.0% |
| ! | ATGGGCAAGTTTGAGGTCAA+TGG | + | chr4.3:48282043-48282062 | MS.gene66676:CDS | 45.0% |
| !! | ACCGAAGTATTGACTGCAGA+CGG | + | chr4.3:48282161-48282180 | MS.gene66676:CDS | 45.0% |
| !!! | ATAATTTTTTATATAACAAA+AGG | + | chr4.3:48283692-48283711 | MS.gene66676:intron | 5.0% |
| ACTGCAAGGCCTTCCTTACA+TGG | + | chr4.3:48282805-48282824 | MS.gene66676:intron | 50.0% | |
| ATTGTTGGAGGAGGTCCTAC+TGG | + | chr4.3:48283117-48283136 | MS.gene66676:CDS | 50.0% | |
| CAATGCCACAACACGGCTAT+AGG | + | chr4.3:48282585-48282604 | MS.gene66676:intron | 50.0% | |
| CACACACAATTAGGAGGTCC+CGG | - | chr4.3:48280788-48280807 | None:intergenic | 50.0% | |
| CATTGTAGTGCAGCGGAACT+TGG | - | chr4.3:48282570-48282589 | None:intergenic | 50.0% | |
| CCAAACAGACCTACTGGTGT+CGG | - | chr4.3:48281279-48281298 | None:intergenic | 50.0% | |
| CCAGCAAGTTCTACACCAGT+AGG | - | chr4.3:48283135-48283154 | None:intergenic | 50.0% | |
| CCTACTGGTGTAGAACTTGC+TGG | + | chr4.3:48283132-48283151 | MS.gene66676:CDS | 50.0% | |
| GAGTGTGCTATGAAAGGGAG+TGG | - | chr4.3:48283584-48283603 | None:intergenic | 50.0% | |
| GCCGTCTGCAGTCAATACTT+CGG | - | chr4.3:48282165-48282184 | None:intergenic | 50.0% | |
| GGATGTTCAGGGGATGATCA+AGG | + | chr4.3:48283446-48283465 | MS.gene66676:CDS | 50.0% | |
| GTTGTGGCATTGTAGTGCAG+CGG | - | chr4.3:48282577-48282596 | None:intergenic | 50.0% | |
| ! | GGCAAGTTTGAGGTCAATGG+TGG | + | chr4.3:48282046-48282065 | MS.gene66676:CDS | 50.0% |
| ! | TCTCCTGACTTGATGTAGCC+AGG | - | chr4.3:48284452-48284471 | None:intergenic | 50.0% |
| !! | TTTTGGGTACAGGGTCTGCA+TGG | - | chr4.3:48282226-48282245 | None:intergenic | 50.0% |
| !!! | AGGGTTTTTGGCACAGAAGC+AGG | + | chr4.3:48284271-48284290 | MS.gene66676:CDS | 50.0% |
| CACTGGTGCACAAAGGACCA+AGG | + | chr4.3:48283190-48283209 | MS.gene66676:CDS | 55.0% | |
| CCGACACCAGTAGGTCTGTT+TGG | + | chr4.3:48281276-48281295 | MS.gene66676:intron | 55.0% | |
| GCACAAAGGACCAAGGCTGT+TGG | + | chr4.3:48283197-48283216 | MS.gene66676:CDS | 55.0% | |
| GGTCAGACACCAACACGTGT+CGG | + | chr4.3:48281880-48281899 | MS.gene66676:intron | 55.0% | |
| TGGAGCCTATAGCCGTGTTG+TGG | - | chr4.3:48282593-48282612 | None:intergenic | 55.0% | |
| GGCACAACACCGACACCAGT+AGG | + | chr4.3:48281267-48281286 | MS.gene66676:intron | 60.0% | |
| GGCACAGAAGCAGGCAGAAG+TGG | + | chr4.3:48284280-48284299 | MS.gene66676:CDS | 60.0% | |
| TACAGGGTCTGCATGGCCAG+TGG | - | chr4.3:48282219-48282238 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 48280321 | 48284532 | 48280321 | ID=MS.gene66676 |
| chr4.3 | mRNA | 48280321 | 48284532 | 48280321 | ID=MS.gene66676.t1;Parent=MS.gene66676 |
| chr4.3 | exon | 48280321 | 48280427 | 48280321 | ID=MS.gene66676.t1.exon1;Parent=MS.gene66676.t1 |
| chr4.3 | CDS | 48280321 | 48280427 | 48280321 | ID=cds.MS.gene66676.t1;Parent=MS.gene66676.t1 |
| chr4.3 | exon | 48282022 | 48282278 | 48282022 | ID=MS.gene66676.t1.exon2;Parent=MS.gene66676.t1 |
| chr4.3 | CDS | 48282022 | 48282278 | 48282022 | ID=cds.MS.gene66676.t1;Parent=MS.gene66676.t1 |
| chr4.3 | exon | 48283082 | 48283536 | 48283082 | ID=MS.gene66676.t1.exon3;Parent=MS.gene66676.t1 |
| chr4.3 | CDS | 48283082 | 48283536 | 48283082 | ID=cds.MS.gene66676.t1;Parent=MS.gene66676.t1 |
| chr4.3 | exon | 48284260 | 48284532 | 48284260 | ID=MS.gene66676.t1.exon4;Parent=MS.gene66676.t1 |
| chr4.3 | CDS | 48284260 | 48284532 | 48284260 | ID=cds.MS.gene66676.t1;Parent=MS.gene66676.t1 |
| Gene Sequence |
| Protein sequence |
