Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98633.t1 | XP_013455753.1 | 96.4 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 7.10E-202 | 713 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98633.t1 | Q54NS9 | 32.0 | 375 | 227 | 7 | 2 | 349 | 23 | 396 | 9.8e-43 | 175.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98633.t1 | A0A072UJ57 | 96.4 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 5.1e-202 | 713.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene98633 | 0.821093 | 4.85E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene98633 | 0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene98633 | 0.820026 | 8.53E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene98633 | 0.823707 | 1.20E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene98633 | 0.800937 | 1.14E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene98633 | 0.815835 | 7.54E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene98633 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene98633 | 0.802071 | 6.67E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene98633 | 0.802748 | 4.84E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene98633 | 0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene98633 | 0.803729 | 3.03E-49 | -1.69E-46 |
| MS.gene051243 | MS.gene98633 | 0.804881 | 1.75E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene98633 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene98633 | 0.816468 | 5.44E-52 | -1.69E-46 |
| MS.gene051344 | MS.gene98633 | 0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene98633 | 0.824025 | 1.01E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene98633 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene98633 | 0.822951 | 1.80E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene98633 | 0.835566 | 1.56E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene98633 | 0.824691 | 7.04E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene98633 | 0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene98633 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene98633 | 0.836853 | 7.34E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene98633 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene98633 | 0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene98633 | 0.822303 | 2.55E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene98633 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene98633 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene98633 | 0.8153 | 9.92E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene98633 | 0.811344 | 7.34E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene98633 | 0.806385 | 8.44E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene98633 | 0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene98633 | 0.83581 | 1.35E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene98633 | 0.809179 | 2.15E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene98633 | 0.818374 | 2.03E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene98633 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene98633 | 0.818197 | 2.22E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene98633 | 0.803137 | 4.02E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene98633 | 0.822654 | 2.11E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene98633 | 0.820182 | 7.85E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene98633 | 0.800038 | 1.74E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene98633 | 0.801892 | 7.26E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene98633 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene98633 | 0.817071 | 3.99E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene98633 | 0.828686 | 7.83E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene98633 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene98633 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene98633 | 0.80399 | 2.68E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene98633 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene98633 | 0.837994 | 3.74E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene98633 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene98633 | 0.801594 | 8.37E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene98633 | 0.823993 | 1.03E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene98633 | 0.818954 | 1.50E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene98633 | 0.825826 | 3.79E-54 | -1.69E-46 |
| MS.gene058548 | MS.gene98633 | 0.807392 | 5.17E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene98633 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene98633 | 0.808019 | 3.80E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene98633 | 0.81397 | 1.95E-51 | -1.69E-46 |
| MS.gene059569 | MS.gene98633 | 0.802182 | 6.34E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene98633 | 0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene98633 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene98633 | 0.82186 | 3.23E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene98633 | 0.8085 | 3.00E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene98633 | 0.803391 | 3.56E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene98633 | 0.82935 | 5.41E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene98633 | 0.828892 | 6.98E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene98633 | 0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene98633 | 0.824621 | 7.31E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene98633 | 0.810662 | 1.03E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene98633 | 0.827606 | 1.43E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98633 | MS.gene66676 | PPI |
| MS.gene98633 | MS.gene73640 | PPI |
| MS.gene98633 | MS.gene044749 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98633.t1 | MTR_4g051645 | 96.419 | 363 | 13 | 0 | 1 | 363 | 1 | 363 | 0.0 | 730 |
| MS.gene98633.t1 | MTR_4g051622 | 68.539 | 356 | 110 | 2 | 6 | 360 | 3 | 357 | 0.0 | 507 |
| MS.gene98633.t1 | MTR_2g061440 | 78.571 | 70 | 15 | 0 | 141 | 210 | 193 | 262 | 3.22e-26 | 110 |
| MS.gene98633.t1 | MTR_4g045993 | 25.610 | 328 | 173 | 12 | 7 | 272 | 48 | 366 | 7.62e-11 | 63.9 |
| MS.gene98633.t1 | MTR_0931s0010 | 25.843 | 267 | 140 | 10 | 78 | 298 | 313 | 567 | 7.70e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98633.t1 | AT3G44190 | 66.292 | 356 | 119 | 1 | 7 | 362 | 12 | 366 | 4.57e-178 | 499 |
| MS.gene98633.t1 | AT5G22140 | 67.606 | 355 | 114 | 1 | 7 | 361 | 12 | 365 | 1.99e-177 | 497 |
| MS.gene98633.t1 | AT3G44190 | 65.495 | 313 | 107 | 1 | 50 | 362 | 1 | 312 | 5.40e-153 | 433 |
| MS.gene98633.t1 | AT5G22140 | 66.026 | 312 | 105 | 1 | 50 | 361 | 1 | 311 | 6.90e-151 | 428 |
| MS.gene98633.t1 | AT5G08740 | 25.888 | 394 | 222 | 16 | 8 | 336 | 82 | 470 | 2.89e-13 | 71.2 |
Find 84 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTTTCACTCCTAATTT+TGG | 0.072580 | 4.2:-50515721 | None:intergenic |
| CAGACCCTGTACCCAAAATT+AGG | 0.314387 | 4.2:+50515709 | MS.gene98633:CDS |
| ATTCAAGTTTCTACAATATG+AGG | 0.339522 | 4.2:-50518273 | None:intergenic |
| ATCATAGGTGGTGGTATTGC+TGG | 0.353406 | 4.2:+50513868 | MS.gene98633:CDS |
| GATAGTCATATGCAATCTTT+TGG | 0.353835 | 4.2:-50515665 | None:intergenic |
| GCTCGTTCGATTCTGATTGT+TGG | 0.354607 | 4.2:+50516861 | MS.gene98633:CDS |
| ACGATAAGTGGAAGAATTCC+TGG | 0.370478 | 4.2:+50518192 | MS.gene98633:CDS |
| CTGCTGATAAGACTCTAAAA+TGG | 0.374188 | 4.2:+50516997 | MS.gene98633:CDS |
| TAGATGAAAACTTGAGAGTC+AGG | 0.392349 | 4.2:+50517228 | MS.gene98633:CDS |
| AACAAATTCTATCGAACTTC+AGG | 0.412309 | 4.2:+50517089 | MS.gene98633:CDS |
| TGGAGATATTACAAACATTC+CGG | 0.415600 | 4.2:+50517274 | MS.gene98633:CDS |
| GAATTCTTCCACTTATCGTT+AGG | 0.425584 | 4.2:-50518188 | None:intergenic |
| CGTTCGATTCTGATTGTTGG+AGG | 0.439915 | 4.2:+50516864 | MS.gene98633:CDS |
| AGATTACATGGGCAAGTTTG+AGG | 0.445110 | 4.2:+50515517 | MS.gene98633:CDS |
| TGGTAGAACAAGAAAACAAA+TGG | 0.450303 | 4.2:+50518242 | MS.gene98633:CDS |
| ATTGTTGGAGGAGGTCCTAC+TGG | 0.453795 | 4.2:+50516876 | MS.gene98633:CDS |
| CCTACTGGTGTAGAACTTGC+TGG | 0.457077 | 4.2:+50516891 | MS.gene98633:CDS |
| ATTCCTGGCTACATCAAGTC+TGG | 0.458214 | 4.2:+50518207 | MS.gene98633:CDS |
| ATACAAACCACATTCGGTAT+TGG | 0.458786 | 4.2:+50518119 | MS.gene98633:CDS |
| TTGTGCACGGGAAAACCATT+TGG | 0.461944 | 4.2:+50517143 | MS.gene98633:CDS |
| AAGTCTGGAGATTTGTTTGT+TGG | 0.464199 | 4.2:+50518222 | MS.gene98633:CDS |
| TTGAGGGAGGTAAAGAATGT+TGG | 0.465885 | 4.2:+50518088 | MS.gene98633:CDS |
| TTCCGTCACATTAACAGCAC+TGG | 0.472573 | 4.2:-50515619 | None:intergenic |
| GACTATCTTGTTATTGCCAC+TGG | 0.472612 | 4.2:+50515681 | MS.gene98633:CDS |
| CACTGTTTAAGTCGACTGCT+TGG | 0.476065 | 4.2:-50517052 | None:intergenic |
| GAAAACCATTTGGTTCATCA+TGG | 0.479147 | 4.2:+50517153 | MS.gene98633:CDS |
| CCAAGGCTGTTGGAATTCAT+AGG | 0.479557 | 4.2:+50516966 | MS.gene98633:CDS |
| CATAGAGAGTACTTCACAAA+AGG | 0.482459 | 4.2:+50515582 | MS.gene98633:CDS |
| ATGGGCAAGTTTGAGGTCAA+TGG | 0.483082 | 4.2:+50515524 | MS.gene98633:CDS |
| TTGCCATTCCTAACGATAAG+TGG | 0.487177 | 4.2:+50518180 | MS.gene98633:CDS |
| GAAGAGCGAGTTGTTATCAT+AGG | 0.489090 | 4.2:+50513853 | MS.gene98633:CDS |
| GGTAGAACAAGAAAACAAAT+GGG | 0.492449 | 4.2:+50518243 | MS.gene98633:CDS |
| ACCAGTGTAACCTTCTTATC+CGG | 0.492762 | 4.2:-50516933 | None:intergenic |
| TTAAGCCATGATGAACCAAA+TGG | 0.498681 | 4.2:-50517158 | None:intergenic |
| CTTCCACTTATCGTTAGGAA+TGG | 0.501735 | 4.2:-50518183 | None:intergenic |
| TCTCCAGACTTGATGTAGCC+AGG | 0.507193 | 4.2:-50518210 | None:intergenic |
| AGGGAGGTAAAGAATGTTGG+AGG | 0.511205 | 4.2:+50518091 | MS.gene98633:CDS |
| TATCAATGTCCTTTCTGCAA+AGG | 0.514570 | 4.2:-50515556 | None:intergenic |
| AACTTGCGGATGATGATTGA+GGG | 0.520998 | 4.2:+50518072 | MS.gene98633:CDS |
| GCCGTCTGCAGTCAATACTT+CGG | 0.521568 | 4.2:-50515643 | None:intergenic |
| GGCACAGAAGCAGGCAGAAG+TGG | 0.522122 | 4.2:+50518041 | MS.gene98633:CDS |
| AGATTGTCATTTCTTGTGCA+CGG | 0.527578 | 4.2:+50517130 | MS.gene98633:CDS |
| TCGATTCTGATTGTTGGAGG+AGG | 0.534318 | 4.2:+50516867 | MS.gene98633:CDS |
| GATTGTCATTTCTTGTGCAC+GGG | 0.534440 | 4.2:+50517131 | MS.gene98633:CDS |
| GGAAACATACAAACCACATT+CGG | 0.534598 | 4.2:+50518113 | MS.gene98633:CDS |
| GCACAAAGGACCAAGGCTGT+TGG | 0.547803 | 4.2:+50516956 | MS.gene98633:CDS |
| CCTATGAATTCCAACAGCCT+TGG | 0.554290 | 4.2:-50516966 | None:intergenic |
| ACTATTGCCAATACCGAATG+TGG | 0.556477 | 4.2:-50518126 | None:intergenic |
| AATGTCCTTTCTGCAAAGGA+TGG | 0.563728 | 4.2:-50515552 | None:intergenic |
| GAAATGACAATCTGCTTCGA+TGG | 0.564040 | 4.2:-50517120 | None:intergenic |
| TGGCAATAGTTTCACTTGGG+AGG | 0.566676 | 4.2:+50518139 | MS.gene98633:CDS |
| TTCAAGTTTCTACAATATGA+GGG | 0.567555 | 4.2:-50518272 | None:intergenic |
| GAACTTGCGGATGATGATTG+AGG | 0.567619 | 4.2:+50518071 | MS.gene98633:CDS |
| GGATGTTCAGGGGATGATCA+AGG | 0.567739 | 4.2:+50517205 | MS.gene98633:CDS |
| CGAGTTGTTATCATAGGTGG+TGG | 0.569292 | 4.2:+50513859 | MS.gene98633:CDS |
| TGGAACCATCCTTTGCAGAA+AGG | 0.578477 | 4.2:+50515547 | MS.gene98633:CDS |
| ACCGAAGTATTGACTGCAGA+CGG | 0.586673 | 4.2:+50515642 | MS.gene98633:CDS |
| TCCGGATAAGAAGGTTACAC+TGG | 0.588992 | 4.2:+50516932 | MS.gene98633:CDS |
| GTATTGGCAATAGTTTCACT+TGG | 0.592229 | 4.2:+50518135 | MS.gene98633:CDS |
| ATACAACAGGAAATCAAGCA+AGG | 0.593247 | 4.2:+50518012 | MS.gene98633:intron |
| GAGCGAGTTGTTATCATAGG+TGG | 0.596638 | 4.2:+50513856 | MS.gene98633:CDS |
| AGATGAAAACTTGAGAGTCA+GGG | 0.597572 | 4.2:+50517229 | MS.gene98633:CDS |
| TACAGGGTCTGCATGGCCAG+TGG | 0.598096 | 4.2:-50515697 | None:intergenic |
| GACTTAAACAGTGACACAGA+TGG | 0.600678 | 4.2:+50517062 | MS.gene98633:CDS |
| ATCCAGTGCTGTTAATGTGA+CGG | 0.604022 | 4.2:+50515617 | MS.gene98633:CDS |
| TATTGGCAATAGTTTCACTT+GGG | 0.604816 | 4.2:+50518136 | MS.gene98633:CDS |
| GGCAAGTTTGAGGTCAATGG+TGG | 0.607275 | 4.2:+50515527 | MS.gene98633:CDS |
| AAATTCTATCGAACTTCAGG+AGG | 0.614776 | 4.2:+50517092 | MS.gene98633:CDS |
| TACAACAGGAAATCAAGCAA+GGG | 0.622339 | 4.2:+50518013 | MS.gene98633:intron |
| AATTCTATCGAACTTCAGGA+GGG | 0.627871 | 4.2:+50517093 | MS.gene98633:CDS |
| CCAGCAAGTTCTACACCAGT+AGG | 0.629097 | 4.2:-50516891 | None:intergenic |
| AAAACTTGAGAGTCAGGGGT+CGG | 0.629348 | 4.2:+50517234 | MS.gene98633:CDS |
| ATTCTATCGAACTTCAGGAG+GGG | 0.649576 | 4.2:+50517094 | MS.gene98633:CDS |
| GTTGAAATCTAAGAATGTTG+AGG | 0.652877 | 4.2:+50517019 | MS.gene98633:CDS |
| CACTGGTGCACAAAGGACCA+AGG | 0.656142 | 4.2:+50516949 | MS.gene98633:CDS |
| GGGAGGTAAAGAATGTTGGA+GGG | 0.657144 | 4.2:+50518092 | MS.gene98633:CDS |
| TAACAGCACTGGATGTAACA+AGG | 0.659638 | 4.2:-50515608 | None:intergenic |
| AAGTGGTTGTGAAGAACTTG+CGG | 0.660896 | 4.2:+50518058 | MS.gene98633:CDS |
| AGAATAATTACGGATCAATG+AGG | 0.662291 | 4.2:-50513933 | None:intergenic |
| GATGAAAACTTGAGAGTCAG+GGG | 0.673851 | 4.2:+50517230 | MS.gene98633:CDS |
| AAGGTTACACTGGTGCACAA+AGG | 0.685956 | 4.2:+50516942 | MS.gene98633:CDS |
| GTAGAACAAGAAAACAAATG+GGG | 0.698957 | 4.2:+50518244 | MS.gene98633:CDS |
| TTGCGGATGATGATTGAGGG+AGG | 0.701459 | 4.2:+50518075 | MS.gene98633:CDS |
| AAAATGACTTGGATGTTCAG+GGG | 0.703696 | 4.2:+50517195 | MS.gene98633:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4.2:50516681-50516700 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4.2:50516680-50516699 | MS.gene98633:intron | 15.0% |
| !! | AATATTTAGATAATAAAGCA+TGG | - | chr4.2:50517682-50517701 | None:intergenic | 15.0% |
| !! | AATGATTAAAATAAAGAGAA+TGG | - | chr4.2:50516714-50516733 | None:intergenic | 15.0% |
| !! | AGAATTCATCAATATAAAAA+AGG | + | chr4.2:50515738-50515757 | MS.gene98633:CDS | 15.0% |
| !! | TAAAGAAGAAAGAATAATTA+CGG | - | chr4.2:50513946-50513965 | None:intergenic | 15.0% |
| !! | TATAGTATTCGTTAAATAAT+AGG | + | chr4.2:50516326-50516345 | MS.gene98633:intron | 15.0% |
| !! | TATCTATTAACATAAACATT+TGG | + | chr4.2:50514797-50514816 | MS.gene98633:intron | 15.0% |
| !! | TATGTGATAAATACTTATAA+GGG | + | chr4.2:50514338-50514357 | MS.gene98633:intron | 15.0% |
| !! | TTATGTGATAAATACTTATA+AGG | + | chr4.2:50514337-50514356 | MS.gene98633:intron | 15.0% |
| !! | TTTGTATAACCATAATAAAA+AGG | - | chr4.2:50515287-50515306 | None:intergenic | 15.0% |
| !!! | ACATAAGTACTTATTTTTAA+TGG | - | chr4.2:50514323-50514342 | None:intergenic | 15.0% |
| !!! | ATGTTTTAACCTTTTTATTA+TGG | + | chr4.2:50515275-50515294 | MS.gene98633:intron | 15.0% |
| !!! | CATAAGTACTTATTTTTAAT+GGG | - | chr4.2:50514322-50514341 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4.2:50516554-50516573 | None:intergenic | 15.0% |
| !!! | CTTTAATTTTCTGAAAATTT+AGG | - | chr4.2:50515315-50515334 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4.2:50516657-50516676 | None:intergenic | 15.0% |
| !!! | TTGAAAAGTGTTTTTTTTTT+TGG | + | chr4.2:50514614-50514633 | MS.gene98633:intron | 15.0% |
| !! | AAAATTGAAACTTTCAAAAC+TGG | - | chr4.2:50514041-50514060 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4.2:50516671-50516690 | MS.gene98633:intron | 20.0% |
| !! | AAATTGAAACTTTCAAAACT+GGG | - | chr4.2:50514040-50514059 | None:intergenic | 20.0% |
| !! | AATAACCAATACAATAACAA+GGG | - | chr4.2:50514387-50514406 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4.2:50516594-50516613 | None:intergenic | 20.0% |
| !! | ATAATATCATAAACACTGAA+AGG | - | chr4.2:50515873-50515892 | None:intergenic | 20.0% |
| !! | ATTTGAACTTATAAGTACTT+TGG | + | chr4.2:50514108-50514127 | MS.gene98633:intron | 20.0% |
| !! | TAAAGAGATTAAAATGCAAT+AGG | - | chr4.2:50517956-50517975 | None:intergenic | 20.0% |
| !! | TAATAACCAATACAATAACA+AGG | - | chr4.2:50514388-50514407 | None:intergenic | 20.0% |
| !! | TACATTAATATCTTCATCAT+TGG | - | chr4.2:50517727-50517746 | None:intergenic | 20.0% |
| !! | TATACTAAATTGAACAATGT+CGG | - | chr4.2:50516448-50516467 | None:intergenic | 20.0% |
| !!! | AAATTAGTCTCAGTTATTTT+GGG | - | chr4.2:50516392-50516411 | None:intergenic | 20.0% |
| !!! | AGTGTTTTTTTTTTTGGAAA+TGG | + | chr4.2:50514620-50514639 | MS.gene98633:intron | 20.0% |
| !!! | CTTTTTAGCTTATTTGTAAA+CGG | + | chr4.2:50514179-50514198 | MS.gene98633:intron | 20.0% |
| !!! | TATGGAATAGATTCATTTTA+TGG | + | chr4.2:50516486-50516505 | MS.gene98633:intron | 20.0% |
| !!! | TTTTCAGAAAATTAAAGTCA+TGG | + | chr4.2:50515318-50515337 | MS.gene98633:intron | 20.0% |
| !!! | TTTTGAAAGTTTCAATTTTG+AGG | + | chr4.2:50514042-50514061 | MS.gene98633:intron | 20.0% |
| ! | AAAAGCCTATATTGTTTGTT+TGG | + | chr4.2:50514235-50514254 | MS.gene98633:intron | 25.0% |
| ! | AAAATGCAATAGGTTTATAG+CGG | - | chr4.2:50517946-50517965 | None:intergenic | 25.0% |
| ! | AAATTCCAATTAGACATGAA+AGG | - | chr4.2:50514519-50514538 | None:intergenic | 25.0% |
| ! | AAGATTCCAAAAACACAAAA+GGG | - | chr4.2:50513999-50514018 | None:intergenic | 25.0% |
| ! | AATTGAATTCAATTGAATCC+AGG | + | chr4.2:50515481-50515500 | MS.gene98633:intron | 25.0% |
| ! | ATTAATGTAAGATGAATGAG+AGG | + | chr4.2:50517738-50517757 | MS.gene98633:intron | 25.0% |
| ! | GGATTCAATTGAATTCAATT+AGG | - | chr4.2:50515481-50515500 | None:intergenic | 25.0% |
| ! | TAAGATTCCAAAAACACAAA+AGG | - | chr4.2:50514000-50514019 | None:intergenic | 25.0% |
| ! | TAGTACAAAGTGATGTAAAA+TGG | - | chr4.2:50516094-50516113 | None:intergenic | 25.0% |
| ! | TCAAACATAGCTTATGAAAA+TGG | - | chr4.2:50515149-50515168 | None:intergenic | 25.0% |
| ! | TCAAATACGTCAATCTAAAT+AGG | + | chr4.2:50517601-50517620 | MS.gene98633:intron | 25.0% |
| !! | AATTCTTTCACTCCTAATTT+TGG | - | chr4.2:50515724-50515743 | None:intergenic | 25.0% |
| !! | ATTCTTTCACTCCTAATTTT+GGG | - | chr4.2:50515723-50515742 | None:intergenic | 25.0% |
| !!! | AGGAATATTTTGAGATTACA+TGG | + | chr4.2:50515505-50515524 | MS.gene98633:CDS | 25.0% |
| !!! | CAAATTAGTCTCAGTTATTT+TGG | - | chr4.2:50516393-50516412 | None:intergenic | 25.0% |
| !!! | GGAATATTTTGAGATTACAT+GGG | + | chr4.2:50515506-50515525 | MS.gene98633:CDS | 25.0% |
| !!! | GTTTTCAAGTTTCAATTTTG+AGG | + | chr4.2:50514591-50514610 | MS.gene98633:intron | 25.0% |
| !!! | TGAACATATGTTTGTTTTGA+CGG | + | chr4.2:50515925-50515944 | MS.gene98633:intron | 25.0% |
| !!! | TGTATTGGTTATTATTGAAG+TGG | + | chr4.2:50514394-50514413 | MS.gene98633:intron | 25.0% |
| AACAAATTCTATCGAACTTC+AGG | + | chr4.2:50517089-50517108 | MS.gene98633:CDS | 30.0% | |
| AACAGTTTCAAGGATCTATT+TGG | - | chr4.2:50515093-50515112 | None:intergenic | 30.0% | |
| AACTGTGTTGAAAAATGACT+TGG | + | chr4.2:50517184-50517203 | MS.gene98633:CDS | 30.0% | |
| AATAGATCCTTGAAACTGTT+TGG | + | chr4.2:50515093-50515112 | MS.gene98633:intron | 30.0% | |
| AATCTCAAAATATTCCTTCC+TGG | - | chr4.2:50515502-50515521 | None:intergenic | 30.0% | |
| AGAATAATTACGGATCAATG+AGG | - | chr4.2:50513936-50513955 | None:intergenic | 30.0% | |
| ATAAACATTTGGACCATGTT+TGG | + | chr4.2:50514808-50514827 | MS.gene98633:intron | 30.0% | |
| ATGCAAACACTAAAATCAGT+AGG | - | chr4.2:50517859-50517878 | None:intergenic | 30.0% | |
| CATGTAATGAGGAACAATAA+AGG | + | chr4.2:50516117-50516136 | MS.gene98633:intron | 30.0% | |
| CCATTAAGAAATAAACCATC+AGG | - | chr4.2:50517986-50518005 | None:intergenic | 30.0% | |
| CTTCAATGTAAATGTATGGT+GGG | - | chr4.2:50515961-50515980 | None:intergenic | 30.0% | |
| CTTTATTGTTCCTCATTACA+TGG | - | chr4.2:50516119-50516138 | None:intergenic | 30.0% | |
| GATTCATTTCATACCATGTA+AGG | - | chr4.2:50516302-50516321 | None:intergenic | 30.0% | |
| GGTAGAACAAGAAAACAAAT+GGG | + | chr4.2:50518243-50518262 | MS.gene98633:CDS | 30.0% | |
| GTAAGTTGTTTATCCAAACA+TGG | - | chr4.2:50514824-50514843 | None:intergenic | 30.0% | |
| GTAGAACAAGAAAACAAATG+GGG | + | chr4.2:50518244-50518263 | MS.gene98633:CDS | 30.0% | |
| GTAGTCCAAACAAACAATAT+AGG | - | chr4.2:50514243-50514262 | None:intergenic | 30.0% | |
| GTATGTAATCACAAGTGTTA+GGG | + | chr4.2:50515340-50515359 | MS.gene98633:intron | 30.0% | |
| GTTGAAATCTAAGAATGTTG+AGG | + | chr4.2:50517019-50517038 | MS.gene98633:CDS | 30.0% | |
| TATTGGCAATAGTTTCACTT+GGG | + | chr4.2:50518136-50518155 | MS.gene98633:CDS | 30.0% | |
| TGGAGATATTACAAACATTC+CGG | + | chr4.2:50517274-50517293 | MS.gene98633:CDS | 30.0% | |
| TGGTAGAACAAGAAAACAAA+TGG | + | chr4.2:50518242-50518261 | MS.gene98633:CDS | 30.0% | |
| TTTCAAGGATCTATTTGGAT+TGG | - | chr4.2:50515088-50515107 | None:intergenic | 30.0% | |
| TTTGTTTGGACTACTTAATC+CGG | + | chr4.2:50514249-50514268 | MS.gene98633:intron | 30.0% | |
| ! | AAAAATGACTTGGATGTTCA+GGG | + | chr4.2:50517194-50517213 | MS.gene98633:CDS | 30.0% |
| ! | AAAGTCTTTTAAACTCGTGA+TGG | - | chr4.2:50516207-50516226 | None:intergenic | 30.0% |
| ! | ACTGTTTTCATAAGCTATCT+TGG | + | chr4.2:50517510-50517529 | MS.gene98633:intron | 30.0% |
| ! | ATAAGTATTGTGAGACTGTT+TGG | - | chr4.2:50515041-50515060 | None:intergenic | 30.0% |
| ! | CCTGATGGTTTATTTCTTAA+TGG | + | chr4.2:50517983-50518002 | MS.gene98633:intron | 30.0% |
| ! | GAAGAAACTCAAGTATTGTT+TGG | - | chr4.2:50516233-50516252 | None:intergenic | 30.0% |
| ! | GATAGTCATATGCAATCTTT+TGG | - | chr4.2:50515668-50515687 | None:intergenic | 30.0% |
| ! | GATATACCCTTTTGTGTTTT+TGG | + | chr4.2:50513990-50514009 | MS.gene98633:intron | 30.0% |
| ! | GCGTATCATGAATGATTTTA+TGG | + | chr4.2:50516468-50516487 | MS.gene98633:intron | 30.0% |
| ! | TAAGTATTGTGAGACTGTTT+GGG | - | chr4.2:50515040-50515059 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4.2:50516763-50516782 | MS.gene98633:intron | 30.0% |
| !! | AATCTTTAAAGTTCACTGCA+AGG | + | chr4.2:50516272-50516291 | MS.gene98633:intron | 30.0% |
| !! | TTAATGGACTTCAATACAAC+AGG | + | chr4.2:50517999-50518018 | MS.gene98633:intron | 30.0% |
| !!! | TAGTTAGTTTTCCATGCATA+TGG | + | chr4.2:50515423-50515442 | MS.gene98633:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4.2:50516762-50516781 | None:intergenic | 30.0% |
| AAACACTTGTGAGACTGTTT+GGG | - | chr4.2:50517565-50517584 | None:intergenic | 35.0% | |
| AAACTGTTTGGAAGAGGTTA+TGG | + | chr4.2:50515105-50515124 | MS.gene98633:intron | 35.0% | |
| AAATTCTATCGAACTTCAGG+AGG | + | chr4.2:50517092-50517111 | MS.gene98633:CDS | 35.0% | |
| AATTCTATCGAACTTCAGGA+GGG | + | chr4.2:50517093-50517112 | MS.gene98633:CDS | 35.0% | |
| AATTGCTTAGCCAATCTTTG+AGG | + | chr4.2:50515893-50515912 | MS.gene98633:intron | 35.0% | |
| AGATGAAAACTTGAGAGTCA+GGG | + | chr4.2:50517229-50517248 | MS.gene98633:CDS | 35.0% | |
| AGTCTACTATCCTCAAAGAT+TGG | - | chr4.2:50515906-50515925 | None:intergenic | 35.0% | |
| ATACAAACCACATTCGGTAT+TGG | + | chr4.2:50518119-50518138 | MS.gene98633:CDS | 35.0% | |
| ATACAACAGGAAATCAAGCA+AGG | + | chr4.2:50518012-50518031 | MS.gene98633:intron | 35.0% | |
| ATGATACCAAGAATGCAGAA+GGG | - | chr4.2:50514548-50514567 | None:intergenic | 35.0% | |
| CAATGAGGAACACACATAAT+TGG | - | chr4.2:50517646-50517665 | None:intergenic | 35.0% | |
| CACGGATAGTAAAAAAACAG+TGG | + | chr4.2:50516020-50516039 | MS.gene98633:intron | 35.0% | |
| CATTTCATACCATGTAAGGA+AGG | - | chr4.2:50516298-50516317 | None:intergenic | 35.0% | |
| GAATTCAATTGAATCCAGGA+AGG | + | chr4.2:50515485-50515504 | MS.gene98633:intron | 35.0% | |
| GAATTCTTCCACTTATCGTT+AGG | - | chr4.2:50518191-50518210 | None:intergenic | 35.0% | |
| GAGAACCTTTCATGTCTAAT+TGG | + | chr4.2:50514511-50514530 | MS.gene98633:intron | 35.0% | |
| GCTTCAATGTAAATGTATGG+TGG | - | chr4.2:50515962-50515981 | None:intergenic | 35.0% | |
| GGAAACATACAAACCACATT+CGG | + | chr4.2:50518113-50518132 | MS.gene98633:CDS | 35.0% | |
| GGAGCTTCAATGTAAATGTA+TGG | - | chr4.2:50515965-50515984 | None:intergenic | 35.0% | |
| GGTATGTAATCACAAGTGTT+AGG | + | chr4.2:50515339-50515358 | MS.gene98633:intron | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | - | chr4.2:50517566-50517585 | None:intergenic | 35.0% | |
| TAATTGTGTGTGTGAGTTTC+AGG | + | chr4.2:50514279-50514298 | MS.gene98633:intron | 35.0% | |
| TACAACAGGAAATCAAGCAA+GGG | + | chr4.2:50518013-50518032 | MS.gene98633:intron | 35.0% | |
| TACAATAACAAGGGTCTGTT+TGG | - | chr4.2:50514378-50514397 | None:intergenic | 35.0% | |
| TAGATGAAAACTTGAGAGTC+AGG | + | chr4.2:50517228-50517247 | MS.gene98633:CDS | 35.0% | |
| TATCAATGTCCTTTCTGCAA+AGG | - | chr4.2:50515559-50515578 | None:intergenic | 35.0% | |
| TCCATGGTGATACAAGAAAT+CGG | - | chr4.2:50516356-50516375 | None:intergenic | 35.0% | |
| TGAAACTCACACACACAATT+AGG | - | chr4.2:50514280-50514299 | None:intergenic | 35.0% | |
| TTAAGCCATGATGAACCAAA+TGG | - | chr4.2:50517161-50517180 | None:intergenic | 35.0% | |
| TTCTTCCTTTGAACTCATGT+AGG | + | chr4.2:50516247-50516266 | MS.gene98633:intron | 35.0% | |
| TTGTACTACACCATGTAATG+AGG | + | chr4.2:50516106-50516125 | MS.gene98633:intron | 35.0% | |
| TTGTTTGGACTACTTAATCC+GGG | + | chr4.2:50514250-50514269 | MS.gene98633:intron | 35.0% | |
| ! | AAAATGACTTGGATGTTCAG+GGG | + | chr4.2:50517195-50517214 | MS.gene98633:CDS | 35.0% |
| ! | AAGTCTGGAGATTTGTTTGT+TGG | + | chr4.2:50518222-50518241 | MS.gene98633:CDS | 35.0% |
| ! | AGATTGTCATTTCTTGTGCA+CGG | + | chr4.2:50517130-50517149 | MS.gene98633:CDS | 35.0% |
| ! | ATGAAAGGTTCTCTTGCTAT+GGG | - | chr4.2:50514504-50514523 | None:intergenic | 35.0% |
| ! | ATGAGAGGTACAATATGTAC+TGG | + | chr4.2:50517753-50517772 | MS.gene98633:intron | 35.0% |
| ! | ATTAGCCTACATGAGTTCAA+AGG | - | chr4.2:50516255-50516274 | None:intergenic | 35.0% |
| ! | CTGCTGATAAGACTCTAAAA+TGG | + | chr4.2:50516997-50517016 | MS.gene98633:CDS | 35.0% |
| ! | GAAAAATGACTTGGATGTTC+AGG | + | chr4.2:50517193-50517212 | MS.gene98633:CDS | 35.0% |
| ! | GAAAACCATTTGGTTCATCA+TGG | + | chr4.2:50517153-50517172 | MS.gene98633:CDS | 35.0% |
| ! | GGGTTCTAATATTTCTTCCA+TGG | - | chr4.2:50516372-50516391 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4.2:50516632-50516651 | None:intergenic | 35.0% |
| ! | GTATTGGCAATAGTTTCACT+TGG | + | chr4.2:50518135-50518154 | MS.gene98633:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4.2:50516628-50516647 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.2:50516528-50516547 | None:intergenic | 35.0% |
| !! | ACAGACCCTTGTTATTGTAT+TGG | + | chr4.2:50514379-50514398 | MS.gene98633:intron | 35.0% |
| !! | CATAGAGAGTACTTCACAAA+AGG | + | chr4.2:50515582-50515601 | MS.gene98633:CDS | 35.0% |
| !! | CTTTTGTGAAGTACTCTCTA+TGG | - | chr4.2:50515584-50515603 | None:intergenic | 35.0% |
| !! | GAAAAAACAGAAGCACTTAC+CGG | - | chr4.2:50517296-50517315 | None:intergenic | 35.0% |
| !!! | AGAGATAGCTGTTGATTTTC+CGG | + | chr4.2:50516914-50516933 | MS.gene98633:CDS | 35.0% |
| !!! | TGTTGATTTTCCGGATAAGA+AGG | + | chr4.2:50516923-50516942 | MS.gene98633:CDS | 35.0% |
| AACTCACACACACAATTAGG+AGG | - | chr4.2:50514277-50514296 | None:intergenic | 40.0% | |
| AACTTGCGGATGATGATTGA+GGG | + | chr4.2:50518072-50518091 | MS.gene98633:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | chr4.2:50517521-50517540 | MS.gene98633:intron | 40.0% | |
| AAGTGGTTGTGAAGAACTTG+CGG | + | chr4.2:50518058-50518077 | MS.gene98633:CDS | 40.0% | |
| AATGTCCTTTCTGCAAAGGA+TGG | - | chr4.2:50515555-50515574 | None:intergenic | 40.0% | |
| ACACTGAAAGGCGATCATTA+TGG | - | chr4.2:50515861-50515880 | None:intergenic | 40.0% | |
| ACCAGTGTAACCTTCTTATC+CGG | - | chr4.2:50516936-50516955 | None:intergenic | 40.0% | |
| ACCTCTTCCAAACAGTTTCA+AGG | - | chr4.2:50515103-50515122 | None:intergenic | 40.0% | |
| ACGATAAGTGGAAGAATTCC+TGG | + | chr4.2:50518192-50518211 | MS.gene98633:CDS | 40.0% | |
| ACTATTGCCAATACCGAATG+TGG | - | chr4.2:50518129-50518148 | None:intergenic | 40.0% | |
| AGATTACATGGGCAAGTTTG+AGG | + | chr4.2:50515517-50515536 | MS.gene98633:CDS | 40.0% | |
| ATGAAAGGCAAGCTACTAGT+TGG | - | chr4.2:50515986-50516005 | None:intergenic | 40.0% | |
| ATGGTGATACAAGAAATCGG+TGG | - | chr4.2:50516353-50516372 | None:intergenic | 40.0% | |
| ATTCTATCGAACTTCAGGAG+GGG | + | chr4.2:50517094-50517113 | MS.gene98633:CDS | 40.0% | |
| CATAGCACACTCAACTCAAT+AGG | + | chr4.2:50517351-50517370 | MS.gene98633:intron | 40.0% | |
| CATGAAAGGTTCTCTTGCTA+TGG | - | chr4.2:50514505-50514524 | None:intergenic | 40.0% | |
| CATGATACCAAGAATGCAGA+AGG | - | chr4.2:50514549-50514568 | None:intergenic | 40.0% | |
| CGGAGAGTCAAAGTTTACAT+AGG | - | chr4.2:50517926-50517945 | None:intergenic | 40.0% | |
| CTTCCACTTATCGTTAGGAA+TGG | - | chr4.2:50518186-50518205 | None:intergenic | 40.0% | |
| GAAATGACAATCTGCTTCGA+TGG | - | chr4.2:50517123-50517142 | None:intergenic | 40.0% | |
| GAAGAGCGAGTTGTTATCAT+AGG | + | chr4.2:50513853-50513872 | MS.gene98633:CDS | 40.0% | |
| GACTTAAACAGTGACACAGA+TGG | + | chr4.2:50517062-50517081 | MS.gene98633:CDS | 40.0% | |
| GAGTTGAGTGTGCTATGAAA+GGG | - | chr4.2:50517348-50517367 | None:intergenic | 40.0% | |
| GATGAAAACTTGAGAGTCAG+GGG | + | chr4.2:50517230-50517249 | MS.gene98633:CDS | 40.0% | |
| GATTGACAACACTGGATGAA+AGG | - | chr4.2:50516001-50516020 | None:intergenic | 40.0% | |
| GGCGATCATTATGGTATTGT+AGG | - | chr4.2:50515852-50515871 | None:intergenic | 40.0% | |
| GTGGTTACGTATACAAAGAG+TGG | - | chr4.2:50517324-50517343 | None:intergenic | 40.0% | |
| TCATCCAGTGTTGTCAATCA+CGG | + | chr4.2:50516002-50516021 | MS.gene98633:intron | 40.0% | |
| TCCTTGAAACTGTTTGGAAG+AGG | + | chr4.2:50515099-50515118 | MS.gene98633:intron | 40.0% | |
| TCTCTTTACAAGCTTCCTGA+TGG | + | chr4.2:50517968-50517987 | MS.gene98633:intron | 40.0% | |
| TGTTTACCCTTCTGCATTCT+TGG | + | chr4.2:50514539-50514558 | MS.gene98633:intron | 40.0% | |
| TTGAGGGAGGTAAAGAATGT+TGG | + | chr4.2:50518088-50518107 | MS.gene98633:CDS | 40.0% | |
| TTGCCATTCCTAACGATAAG+TGG | + | chr4.2:50518180-50518199 | MS.gene98633:CDS | 40.0% | |
| TTTAGTGTTTGCATTCCTCG+AGG | + | chr4.2:50517865-50517884 | MS.gene98633:intron | 40.0% | |
| TTTCTATGATGCACAGACAC+AGG | + | chr4.2:50514727-50514746 | MS.gene98633:intron | 40.0% | |
| ! | ACCGATTTCTTGTATCACCA+TGG | + | chr4.2:50516352-50516371 | MS.gene98633:intron | 40.0% |
| ! | ATCCAGTGCTGTTAATGTGA+CGG | + | chr4.2:50515617-50515636 | MS.gene98633:CDS | 40.0% |
| ! | ATTGGAGCATCACAAGACTA+AGG | - | chr4.2:50517628-50517647 | None:intergenic | 40.0% |
| ! | CGGAACAACATTTTTGCAGT+TGG | + | chr4.2:50517254-50517273 | MS.gene98633:CDS | 40.0% |
| ! | GAGGTACAATATGTACTGGT+TGG | + | chr4.2:50517757-50517776 | MS.gene98633:intron | 40.0% |
| ! | GATTGTCATTTCTTGTGCAC+GGG | + | chr4.2:50517131-50517150 | MS.gene98633:CDS | 40.0% |
| ! | GGAAATCAAGCAAGGGTTTT+TGG | + | chr4.2:50518020-50518039 | MS.gene98633:intron | 40.0% |
| ! | GGTCTCAGTTTAGTTCAATG+AGG | - | chr4.2:50517661-50517680 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4.2:50516629-50516648 | None:intergenic | 40.0% |
| ! | TAACAGCACTGGATGTAACA+AGG | - | chr4.2:50515611-50515630 | None:intergenic | 40.0% |
| ! | TGAGTTGAGTGTGCTATGAA+AGG | - | chr4.2:50517349-50517368 | None:intergenic | 40.0% |
| ! | TTGGAGCATCACAAGACTAA+GGG | - | chr4.2:50517627-50517646 | None:intergenic | 40.0% |
| ! | TTTCAGGTGGTGATTGTCTA+CGG | + | chr4.2:50514295-50514314 | MS.gene98633:intron | 40.0% |
| !! | CACTCCTAATTTTGGGTACA+GGG | - | chr4.2:50515716-50515735 | None:intergenic | 40.0% |
| !! | GACTATCTTGTTATTGCCAC+TGG | + | chr4.2:50515681-50515700 | MS.gene98633:CDS | 40.0% |
| !! | TATGTACTGGTTGGTACTAC+AGG | + | chr4.2:50517766-50517785 | MS.gene98633:intron | 40.0% |
| !! | TCACTCCTAATTTTGGGTAC+AGG | - | chr4.2:50515717-50515736 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4.2:50516767-50516786 | MS.gene98633:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.2:50516786-50516767 | None:intergenic | 40.0% |
| AAAACTTGAGAGTCAGGGGT+CGG | + | chr4.2:50517234-50517253 | MS.gene98633:CDS | 45.0% | |
| AAGGTTACACTGGTGCACAA+AGG | + | chr4.2:50516942-50516961 | MS.gene98633:CDS | 45.0% | |
| AGGGAGGTAAAGAATGTTGG+AGG | + | chr4.2:50518091-50518110 | MS.gene98633:CDS | 45.0% | |
| AGTATAGCTTTCTGTGCACG+TGG | + | chr4.2:50514459-50514478 | MS.gene98633:intron | 45.0% | |
| ATGTGTACATAAGCACCTCG+AGG | - | chr4.2:50517883-50517902 | None:intergenic | 45.0% | |
| ATTCCTGGCTACATCAAGTC+TGG | + | chr4.2:50518207-50518226 | MS.gene98633:CDS | 45.0% | |
| CAATTCGACAGCCATATGCA+TGG | - | chr4.2:50515437-50515456 | None:intergenic | 45.0% | |
| CACTGTTTAAGTCGACTGCT+TGG | - | chr4.2:50517055-50517074 | None:intergenic | 45.0% | |
| CAGACCCTGTACCCAAAATT+AGG | + | chr4.2:50515709-50515728 | MS.gene98633:CDS | 45.0% | |
| CCAAGGCTGTTGGAATTCAT+AGG | + | chr4.2:50516966-50516985 | MS.gene98633:CDS | 45.0% | |
| CCTATGAATTCCAACAGCCT+TGG | - | chr4.2:50516969-50516988 | None:intergenic | 45.0% | |
| CGAGTTGTTATCATAGGTGG+TGG | + | chr4.2:50513859-50513878 | MS.gene98633:CDS | 45.0% | |
| CGTTCGATTCTGATTGTTGG+AGG | + | chr4.2:50516864-50516883 | MS.gene98633:CDS | 45.0% | |
| CTATCCGTGATTGACAACAC+TGG | - | chr4.2:50516009-50516028 | None:intergenic | 45.0% | |
| CTCAACTCAATAGGTTGCTC+AGG | + | chr4.2:50517360-50517379 | MS.gene98633:intron | 45.0% | |
| CTCAATCCAAACAGACCTAC+TGG | - | chr4.2:50514766-50514785 | None:intergenic | 45.0% | |
| GAACTTGCGGATGATGATTG+AGG | + | chr4.2:50518071-50518090 | MS.gene98633:CDS | 45.0% | |
| GAGCGAGTTGTTATCATAGG+TGG | + | chr4.2:50513856-50513875 | MS.gene98633:CDS | 45.0% | |
| GCTCGTTCGATTCTGATTGT+TGG | + | chr4.2:50516861-50516880 | MS.gene98633:CDS | 45.0% | |
| GGGAGGTAAAGAATGTTGGA+GGG | + | chr4.2:50518092-50518111 | MS.gene98633:CDS | 45.0% | |
| TAGGTTGCTCAGGTCATGTT+TGG | + | chr4.2:50517370-50517389 | MS.gene98633:intron | 45.0% | |
| TCCGGATAAGAAGGTTACAC+TGG | + | chr4.2:50516932-50516951 | MS.gene98633:CDS | 45.0% | |
| TCGATTCTGATTGTTGGAGG+AGG | + | chr4.2:50516867-50516886 | MS.gene98633:CDS | 45.0% | |
| TGCACTACAATGCCACAACA+CGG | + | chr4.2:50516059-50516078 | MS.gene98633:intron | 45.0% | |
| TGGAACCATCCTTTGCAGAA+AGG | + | chr4.2:50515547-50515566 | MS.gene98633:CDS | 45.0% | |
| TGGCAATAGTTTCACTTGGG+AGG | + | chr4.2:50518139-50518158 | MS.gene98633:CDS | 45.0% | |
| TTCAGGTGGTGATTGTCTAC+GGG | + | chr4.2:50514296-50514315 | MS.gene98633:intron | 45.0% | |
| TTCCGTCACATTAACAGCAC+TGG | - | chr4.2:50515622-50515641 | None:intergenic | 45.0% | |
| TTGTGCACGGGAAAACCATT+TGG | + | chr4.2:50517143-50517162 | MS.gene98633:CDS | 45.0% | |
| TTGTGTGTGTGAGTTTCAGG+TGG | + | chr4.2:50514282-50514301 | MS.gene98633:intron | 45.0% | |
| TTTGAATGTCCGACACGTGT+TGG | - | chr4.2:50515373-50515392 | None:intergenic | 45.0% | |
| ! | AGGCTTTTGTCAGTTGAGCT+AGG | - | chr4.2:50514223-50514242 | None:intergenic | 45.0% |
| ! | ATCATAGGTGGTGGTATTGC+TGG | + | chr4.2:50513868-50513887 | MS.gene98633:CDS | 45.0% |
| ! | ATGGGCAAGTTTGAGGTCAA+TGG | + | chr4.2:50515524-50515543 | MS.gene98633:CDS | 45.0% |
| !! | ACCGAAGTATTGACTGCAGA+CGG | + | chr4.2:50515642-50515661 | MS.gene98633:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4.2:50516766-50516785 | MS.gene98633:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.2:50516785-50516766 | None:intergenic | 45.0% |
| ACTGCAAGGCCTTCCTTACA+TGG | + | chr4.2:50516286-50516305 | MS.gene98633:intron | 50.0% | |
| ATTGTTGGAGGAGGTCCTAC+TGG | + | chr4.2:50516876-50516895 | MS.gene98633:CDS | 50.0% | |
| CAATGCCACAACACGGCTAT+AGG | + | chr4.2:50516066-50516085 | MS.gene98633:intron | 50.0% | |
| CACACACAATTAGGAGGTCC+CGG | - | chr4.2:50514271-50514290 | None:intergenic | 50.0% | |
| CATTGTAGTGCAGCGGAACT+TGG | - | chr4.2:50516051-50516070 | None:intergenic | 50.0% | |
| CCAAACAGACCTACTGGTGT+CGG | - | chr4.2:50514760-50514779 | None:intergenic | 50.0% | |
| CCAGCAAGTTCTACACCAGT+AGG | - | chr4.2:50516894-50516913 | None:intergenic | 50.0% | |
| CCTACTGGTGTAGAACTTGC+TGG | + | chr4.2:50516891-50516910 | MS.gene98633:CDS | 50.0% | |
| GAGTGTGCTATGAAAGGGAG+TGG | - | chr4.2:50517343-50517362 | None:intergenic | 50.0% | |
| GCCGTCTGCAGTCAATACTT+CGG | - | chr4.2:50515646-50515665 | None:intergenic | 50.0% | |
| GGATGTTCAGGGGATGATCA+AGG | + | chr4.2:50517205-50517224 | MS.gene98633:CDS | 50.0% | |
| GTTGTGGCATTGTAGTGCAG+CGG | - | chr4.2:50516058-50516077 | None:intergenic | 50.0% | |
| TCTCCAGACTTGATGTAGCC+AGG | - | chr4.2:50518213-50518232 | None:intergenic | 50.0% | |
| TTGCGGATGATGATTGAGGG+AGG | + | chr4.2:50518075-50518094 | MS.gene98633:CDS | 50.0% | |
| ! | GGCAAGTTTGAGGTCAATGG+TGG | + | chr4.2:50515527-50515546 | MS.gene98633:CDS | 50.0% |
| !! | TTTTGGGTACAGGGTCTGCA+TGG | - | chr4.2:50515707-50515726 | None:intergenic | 50.0% |
| !!! | AGGGTTTTTGGCACAGAAGC+AGG | + | chr4.2:50518032-50518051 | MS.gene98633:CDS | 50.0% |
| CACTGGTGCACAAAGGACCA+AGG | + | chr4.2:50516949-50516968 | MS.gene98633:CDS | 55.0% | |
| CCGACACCAGTAGGTCTGTT+TGG | + | chr4.2:50514757-50514776 | MS.gene98633:intron | 55.0% | |
| GCACAAAGGACCAAGGCTGT+TGG | + | chr4.2:50516956-50516975 | MS.gene98633:CDS | 55.0% | |
| GGTCAGACACCAACACGTGT+CGG | + | chr4.2:50515361-50515380 | MS.gene98633:intron | 55.0% | |
| TGGAGCCTATAGCCGTGTTG+TGG | - | chr4.2:50516074-50516093 | None:intergenic | 55.0% | |
| GGCACAACACCGACACCAGT+AGG | + | chr4.2:50514748-50514767 | MS.gene98633:intron | 60.0% | |
| GGCACAGAAGCAGGCAGAAG+TGG | + | chr4.2:50518041-50518060 | MS.gene98633:CDS | 60.0% | |
| TACAGGGTCTGCATGGCCAG+TGG | - | chr4.2:50515700-50515719 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 50513838 | 50518293 | 50513838 | ID=MS.gene98633 |
| chr4.2 | mRNA | 50513838 | 50518293 | 50513838 | ID=MS.gene98633.t1;Parent=MS.gene98633 |
| chr4.2 | exon | 50513838 | 50513944 | 50513838 | ID=MS.gene98633.t1.exon1;Parent=MS.gene98633.t1 |
| chr4.2 | CDS | 50513838 | 50513944 | 50513838 | ID=cds.MS.gene98633.t1;Parent=MS.gene98633.t1 |
| chr4.2 | exon | 50515503 | 50515759 | 50515503 | ID=MS.gene98633.t1.exon2;Parent=MS.gene98633.t1 |
| chr4.2 | CDS | 50515503 | 50515759 | 50515503 | ID=cds.MS.gene98633.t1;Parent=MS.gene98633.t1 |
| chr4.2 | exon | 50516841 | 50517295 | 50516841 | ID=MS.gene98633.t1.exon3;Parent=MS.gene98633.t1 |
| chr4.2 | CDS | 50516841 | 50517295 | 50516841 | ID=cds.MS.gene98633.t1;Parent=MS.gene98633.t1 |
| chr4.2 | exon | 50518021 | 50518293 | 50518021 | ID=MS.gene98633.t1.exon4;Parent=MS.gene98633.t1 |
| chr4.2 | CDS | 50518021 | 50518293 | 50518021 | ID=cds.MS.gene98633.t1;Parent=MS.gene98633.t1 |
| Gene Sequence |
| Protein sequence |
