Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045357.t1 | XP_003601683.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.90E-278 | 965.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045357.t1 | O23254 | 90.7 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 1.8e-259 | 896.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045357.t1 | G7JAR7 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.7e-278 | 965.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045357 | MS.gene027729 | PPI |
| MS.gene045357 | MS.gene047182 | PPI |
| MS.gene045357 | MS.gene00638 | PPI |
| MS.gene045357 | MS.gene072040 | PPI |
| MS.gene045357 | MS.gene86222 | PPI |
| MS.gene045357 | MS.gene002066 | PPI |
| MS.gene045357 | MS.gene44289 | PPI |
| MS.gene045357 | MS.gene29165 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045357.t1 | MTR_3g084310 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 974 |
| MS.gene045357.t1 | MTR_8g081510 | 94.268 | 471 | 27 | 0 | 1 | 471 | 1 | 471 | 0.0 | 935 |
| MS.gene045357.t1 | MTR_3g084310 | 97.802 | 364 | 8 | 0 | 1 | 364 | 1 | 364 | 0.0 | 748 |
| MS.gene045357.t1 | MTR_2g006570 | 64.440 | 464 | 160 | 1 | 4 | 462 | 128 | 591 | 0.0 | 645 |
| MS.gene045357.t1 | MTR_3g073470 | 64.425 | 461 | 156 | 2 | 7 | 462 | 118 | 575 | 0.0 | 638 |
| MS.gene045357.t1 | MTR_2g006570 | 64.762 | 420 | 143 | 1 | 48 | 462 | 1 | 420 | 0.0 | 585 |
| MS.gene045357.t1 | MTR_5g030950 | 58.369 | 466 | 187 | 4 | 9 | 469 | 53 | 516 | 0.0 | 555 |
| MS.gene045357.t1 | MTR_5g067060 | 57.602 | 467 | 189 | 5 | 9 | 469 | 42 | 505 | 0.0 | 551 |
| MS.gene045357.t1 | MTR_2g018290 | 59.607 | 458 | 165 | 6 | 12 | 461 | 87 | 532 | 0.0 | 544 |
| MS.gene045357.t1 | MTR_7g108420 | 48.519 | 439 | 183 | 9 | 37 | 462 | 1 | 409 | 1.86e-129 | 381 |
| MS.gene045357.t1 | MTR_1g073580 | 44.068 | 118 | 65 | 1 | 317 | 433 | 83 | 200 | 6.62e-24 | 100 |
| MS.gene045357.t1 | MTR_1g073580 | 30.942 | 223 | 133 | 6 | 157 | 363 | 1 | 218 | 6.01e-20 | 89.4 |
| MS.gene045357.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 2.89e-21 | 92.8 |
| MS.gene045357.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 6.77e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045357.t1 | AT4G13930 | 90.658 | 471 | 44 | 0 | 1 | 471 | 1 | 471 | 0.0 | 902 |
| MS.gene045357.t1 | AT4G13890 | 78.541 | 466 | 100 | 0 | 1 | 466 | 1 | 466 | 0.0 | 794 |
| MS.gene045357.t1 | AT4G13890 | 79.540 | 391 | 80 | 0 | 1 | 391 | 1 | 391 | 0.0 | 672 |
| MS.gene045357.t1 | AT1G36370 | 63.305 | 466 | 166 | 1 | 4 | 464 | 130 | 595 | 0.0 | 635 |
| MS.gene045357.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
| MS.gene045357.t1 | AT1G22020 | 62.284 | 464 | 170 | 1 | 4 | 462 | 134 | 597 | 0.0 | 624 |
| MS.gene045357.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
| MS.gene045357.t1 | AT4G32520 | 59.785 | 465 | 168 | 6 | 3 | 461 | 77 | 528 | 0.0 | 572 |
| MS.gene045357.t1 | AT4G37930 | 57.479 | 468 | 192 | 4 | 9 | 471 | 52 | 517 | 0.0 | 561 |
| MS.gene045357.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
| MS.gene045357.t1 | AT5G26780 | 56.410 | 468 | 197 | 4 | 9 | 471 | 52 | 517 | 0.0 | 545 |
| MS.gene045357.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
| MS.gene045357.t1 | AT5G26780 | 54.545 | 484 | 197 | 5 | 9 | 471 | 52 | 533 | 0.0 | 535 |
Find 161 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTAGGTCGTGGATTTC+TGG | 0.053246 | 3.4:+78959915 | None:intergenic |
| ACTTCTCAACATCAGCTTTA+AGG | 0.149316 | 3.4:+78958264 | None:intergenic |
| CAACAACCCATAAGAGTTTA+AGG | 0.154381 | 3.4:-78959158 | MS.gene045357:CDS |
| ATTCTCAGGCTGACCCTTCT+TGG | 0.216164 | 3.4:+78959089 | None:intergenic |
| TGGGACCCCTTAAACTCTTA+TGG | 0.221123 | 3.4:+78959151 | None:intergenic |
| TATCCTAGAGATTGGGATTA+TGG | 0.237401 | 3.4:-78959390 | MS.gene045357:CDS |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 3.4:-78959505 | MS.gene045357:CDS |
| TCCATCTCGACGCCGCCACC+TGG | 0.291241 | 3.4:-78959695 | MS.gene045357:CDS |
| GTGCCCCAGCTATGACTTCC+AGG | 0.297783 | 3.4:-78958427 | MS.gene045357:CDS |
| GTGTTTCCCCATTCACTAAC+TGG | 0.306705 | 3.4:+78959957 | None:intergenic |
| CTATTAGGTCGTGGATTTCT+GGG | 0.321184 | 3.4:+78959916 | None:intergenic |
| GGGACCCCTTAAACTCTTAT+GGG | 0.322732 | 3.4:+78959152 | None:intergenic |
| TGTTGGTGAGGGCGCTTCCT+AGG | 0.327933 | 3.4:+78959814 | None:intergenic |
| TGACCCTTCTTGGGTGGCTT+AGG | 0.330375 | 3.4:+78959099 | None:intergenic |
| CTATACTCTTGCAGGCAATA+AGG | 0.347246 | 3.4:-78958725 | MS.gene045357:intron |
| TCTTGCTGTTGCTTTGAAAC+AGG | 0.352836 | 3.4:-78958983 | MS.gene045357:CDS |
| TTCTCAGGCTGACCCTTCTT+GGG | 0.360042 | 3.4:+78959090 | None:intergenic |
| CTAGAGATTCAAAAGGAATA+TGG | 0.360286 | 3.4:-78958341 | MS.gene045357:CDS |
| ACTCATGGTTACTATACTTC+CGG | 0.367102 | 3.4:-78959558 | MS.gene045357:CDS |
| CCGGGTTTATTGATTATGAT+AGG | 0.371832 | 3.4:-78959470 | MS.gene045357:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.378762 | 3.4:-78959307 | MS.gene045357:intron |
| AGCTATGACTTCCAGGGGTC+TGG | 0.390169 | 3.4:-78958420 | MS.gene045357:CDS |
| TAGGTTGGAGGAGAAAGCTT+TGG | 0.396658 | 3.4:-78959451 | MS.gene045357:CDS |
| TCTGGGTCTACGGTTACTAA+TGG | 0.398028 | 3.4:+78959933 | None:intergenic |
| TGTGATATGGCTCATATTAG+TGG | 0.398072 | 3.4:-78959324 | MS.gene045357:CDS |
| TTCCGGTGGGAAGAAGATTT+CGG | 0.399859 | 3.4:-78959541 | MS.gene045357:CDS |
| TGAAAATCATCTTGTCTTGT+GGG | 0.412161 | 3.4:-78958854 | MS.gene045357:CDS |
| CCATCTCGACGCCGCCACCT+GGG | 0.419420 | 3.4:-78959694 | MS.gene045357:CDS |
| GCCGCCGTAGTAACGGTTAC+CGG | 0.420593 | 3.4:+78959773 | None:intergenic |
| CATGCCTTCGGAATATTTGT+TGG | 0.421243 | 3.4:+78959797 | None:intergenic |
| CCGTTCTCAATCCTCATGAT+AGG | 0.427240 | 3.4:-78959617 | MS.gene045357:CDS |
| TGGGTGGCTTAGGTCCCTTC+CGG | 0.427659 | 3.4:+78959109 | None:intergenic |
| AGACCAAAGTTGATCATTTG+TGG | 0.433982 | 3.4:-78959423 | MS.gene045357:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 3.4:+78958933 | None:intergenic |
| TTGTGGGATCTCCGCCCTCT+TGG | 0.438255 | 3.4:-78958838 | MS.gene045357:CDS |
| GATAGCAGTGCCTTGGCACC+TGG | 0.439523 | 3.4:-78958646 | MS.gene045357:CDS |
| CTCCGCCCTCTTGGCTTGAC+CGG | 0.443426 | 3.4:-78958829 | MS.gene045357:intron |
| GAAGTGCTTATCCTAGAGAT+TGG | 0.443642 | 3.4:-78959398 | MS.gene045357:CDS |
| AAATCATAAACTGCATTCTC+AGG | 0.445883 | 3.4:+78959075 | None:intergenic |
| TTCGGAATATTTGTTGGTGA+GGG | 0.446564 | 3.4:+78959803 | None:intergenic |
| AAATATTCCGAAGGCATGCC+CGG | 0.451502 | 3.4:-78959792 | MS.gene045357:CDS |
| GTTGTCGAATTCACCTTATA+CGG | 0.452900 | 3.4:+78959492 | None:intergenic |
| TTGAAACAGGCCACCACACC+AGG | 0.453031 | 3.4:-78958970 | MS.gene045357:CDS |
| GTTCGATTCCGCGGCATTGA+CGG | 0.453190 | 3.4:+78959880 | None:intergenic |
| TCAGCATCATTTGATATGCC+TGG | 0.454342 | 3.4:-78958239 | MS.gene045357:CDS |
| AACAACCCATAAGAGTTTAA+GGG | 0.454960 | 3.4:-78959157 | MS.gene045357:CDS |
| CAATCCTCATGATAGGATCA+TGG | 0.456642 | 3.4:-78959610 | MS.gene045357:CDS |
| CAATGGATCCAGTTAGTGAA+TGG | 0.456981 | 3.4:-78959965 | MS.gene045357:CDS |
| TTGGCATAGGCCTTGAACCC+TGG | 0.457437 | 3.4:+78958952 | None:intergenic |
| GGCCTATGCCAAGCAAGTTA+AGG | 0.461054 | 3.4:-78958941 | MS.gene045357:CDS |
| GTTGGTGAGGGCGCTTCCTA+GGG | 0.465658 | 3.4:+78959815 | None:intergenic |
| CTGAAAATCATCTTGTCTTG+TGG | 0.469345 | 3.4:-78958855 | MS.gene045357:CDS |
| GTCCTTCTCAACCAGACCCC+TGG | 0.471209 | 3.4:+78958409 | None:intergenic |
| GGCGAAATTCGCCGGTGAGC+CGG | 0.471948 | 3.4:+78959650 | None:intergenic |
| TTACCAATCCTTACTCCTCC+AGG | 0.475480 | 3.4:+78958628 | None:intergenic |
| AGACCCCTGGAAGTCATAGC+TGG | 0.480209 | 3.4:+78958422 | None:intergenic |
| GTCGTGGATTTCTGGGTCTA+CGG | 0.480956 | 3.4:+78959923 | None:intergenic |
| ACGGTTACCGGGCATGCCTT+CGG | 0.482851 | 3.4:+78959785 | None:intergenic |
| CAACAGCAAGAGCACCAATC+TGG | 0.482879 | 3.4:+78958995 | None:intergenic |
| GGCCACCACACCAGGGTTCA+AGG | 0.482931 | 3.4:-78958962 | MS.gene045357:CDS |
| AATGGATCCAGTTAGTGAAT+GGG | 0.485642 | 3.4:-78959964 | MS.gene045357:CDS |
| CCACCACAAATGATCAACTT+TGG | 0.485734 | 3.4:+78959420 | None:intergenic |
| CCCAGGTGGCGGCGTCGAGA+TGG | 0.488002 | 3.4:+78959694 | None:intergenic |
| AAGTGCTTATCCTAGAGATT+GGG | 0.489191 | 3.4:-78959397 | MS.gene045357:CDS |
| CCTTGGCACCTGGAGGAGTA+AGG | 0.493344 | 3.4:-78958636 | MS.gene045357:CDS |
| GGGACCTAAGCCACCCAAGA+AGG | 0.493443 | 3.4:-78959103 | MS.gene045357:CDS |
| AGTTTAAGGGGTCCCAGGGC+TGG | 0.495042 | 3.4:-78959144 | MS.gene045357:CDS |
| AGCTCAGACACTAGGAATCC+AGG | 0.498066 | 3.4:+78958221 | None:intergenic |
| TTCGCCGGTGAGCCGGAGTA+AGG | 0.500155 | 3.4:+78959657 | None:intergenic |
| AACGTTGACACCCCAGGTGG+CGG | 0.500618 | 3.4:+78959683 | None:intergenic |
| TATAAGGTGAATTCGACAAC+CGG | 0.500999 | 3.4:-78959489 | MS.gene045357:CDS |
| ATAAGAGTTTAAGGGGTCCC+AGG | 0.506409 | 3.4:-78959149 | MS.gene045357:CDS |
| TTTCGGTGATAGCAGTGCCT+TGG | 0.507923 | 3.4:-78958653 | MS.gene045357:CDS |
| ATTTCCAAGTGCAACTGCAT+TGG | 0.507929 | 3.4:+78958918 | None:intergenic |
| GGCCTTAACTTGCTTGGCAT+AGG | 0.510929 | 3.4:+78958939 | None:intergenic |
| GTGTAAGCGGCGAAATTCGC+CGG | 0.514096 | 3.4:+78959642 | None:intergenic |
| AAGGCCAATGCAGTTGCACT+TGG | 0.514829 | 3.4:-78958922 | MS.gene045357:CDS |
| TTCCAGGGGTCTGGTTGAGA+AGG | 0.515430 | 3.4:-78958411 | MS.gene045357:CDS |
| GTTTATTGATTATGATAGGT+TGG | 0.517688 | 3.4:-78959466 | MS.gene045357:CDS |
| ATGGGACTGGATCTACCTTC+TGG | 0.519276 | 3.4:-78959591 | MS.gene045357:CDS |
| CTTCGGAATATTTGTTGGTG+AGG | 0.520695 | 3.4:+78959802 | None:intergenic |
| GGCCTTGAACCCTGGTGTGG+TGG | 0.521068 | 3.4:+78958960 | None:intergenic |
| CTTCCATAATCCCAATCTCT+AGG | 0.521993 | 3.4:+78959387 | None:intergenic |
| CTAGAGATTGGGATTATGGA+AGG | 0.522411 | 3.4:-78959386 | MS.gene045357:CDS |
| TCAGGCTGACCCTTCTTGGG+TGG | 0.523838 | 3.4:+78959093 | None:intergenic |
| TGGAAATTACTTGATGAGCA+AGG | 0.526987 | 3.4:-78958902 | MS.gene045357:CDS |
| TCTCACACTAGAGATTCAAA+AGG | 0.529312 | 3.4:-78958348 | MS.gene045357:CDS |
| TGCCCCAGCTATGACTTCCA+GGG | 0.531621 | 3.4:-78958426 | MS.gene045357:CDS |
| TCTGGTGGACATTTGACTCA+TGG | 0.533259 | 3.4:-78959573 | MS.gene045357:CDS |
| GACCCCTGGAAGTCATAGCT+GGG | 0.538130 | 3.4:+78958423 | None:intergenic |
| TCATGATAGGATCATGGGAC+TGG | 0.541625 | 3.4:-78959604 | MS.gene045357:CDS |
| GGAAATTACTTGATGAGCAA+GGG | 0.546759 | 3.4:-78958901 | MS.gene045357:CDS |
| ACGATGTCACAGAACTCAAA+GGG | 0.551161 | 3.4:+78959186 | None:intergenic |
| GGTCCTCACAACCACCAGAT+TGG | 0.554648 | 3.4:-78959009 | MS.gene045357:CDS |
| ATTCGTTGCCGCCGTAGTAA+CGG | 0.556361 | 3.4:+78959766 | None:intergenic |
| GGTGGCGGCGTCGAGATGGA+AGG | 0.558501 | 3.4:+78959698 | None:intergenic |
| GTGAGGACCACCCTGAAGGG+AGG | 0.560471 | 3.4:+78959023 | None:intergenic |
| GTAGAAGATCATACCAGCCC+TGG | 0.560560 | 3.4:+78959131 | None:intergenic |
| AATCCTCATGATAGGATCAT+GGG | 0.561616 | 3.4:-78959609 | MS.gene045357:CDS |
| CCGCCGTAGTAACGGTTACC+GGG | 0.564640 | 3.4:+78959774 | None:intergenic |
| GCACCTGGAGGAGTAAGGAT+TGG | 0.566548 | 3.4:-78958631 | MS.gene045357:intron |
| TATTGATTATGATAGGTTGG+AGG | 0.566772 | 3.4:-78959463 | MS.gene045357:CDS |
| CATCTCGACGCCGCCACCTG+GGG | 0.569527 | 3.4:-78959693 | MS.gene045357:CDS |
| TGTACTTTAGCTCAGACACT+AGG | 0.569790 | 3.4:+78958213 | None:intergenic |
| CCTTACTCCTCCAGGTGCCA+AGG | 0.571898 | 3.4:+78958636 | None:intergenic |
| AGCCGAAATCTTCTTCCCAC+CGG | 0.572971 | 3.4:+78959539 | None:intergenic |
| TGAGGACCACCCTGAAGGGA+GGG | 0.581330 | 3.4:+78959024 | None:intergenic |
| GGCTTCAATGACTGCGAAGG+AGG | 0.581885 | 3.4:+78959836 | None:intergenic |
| GGGCTGGTATGATCTTCTAC+CGG | 0.582673 | 3.4:-78959128 | MS.gene045357:CDS |
| TACTCTTGCAGGCAATAAGG+TGG | 0.583557 | 3.4:-78958722 | MS.gene045357:intron |
| AGTGTCTGAGCTAAAGTACA+AGG | 0.584233 | 3.4:-78958210 | MS.gene045357:CDS |
| TTCGCAGTCATTGAAGCCCT+AGG | 0.584856 | 3.4:-78959831 | MS.gene045357:CDS |
| AGGCGGTGAGAGCGCGTGAG+CGG | 0.589839 | 3.4:+78959718 | None:intergenic |
| AAGGGATACAGTCTTGTCAC+TGG | 0.593253 | 3.4:-78958883 | MS.gene045357:CDS |
| TGGTATGATCTTCTACCGGA+AGG | 0.596236 | 3.4:-78959124 | MS.gene045357:CDS |
| GAGGACCACCCTGAAGGGAG+GGG | 0.597307 | 3.4:+78959025 | None:intergenic |
| GACGATGTCACAGAACTCAA+AGG | 0.597789 | 3.4:+78959185 | None:intergenic |
| ATTGAGAACGGCAGTGTAAG+CGG | 0.599880 | 3.4:+78959629 | None:intergenic |
| TGAGAGTTACTGCACGGTGA+AGG | 0.602137 | 3.4:+78958366 | None:intergenic |
| GGACTGGATCTACCTTCTGG+TGG | 0.603220 | 3.4:-78959588 | MS.gene045357:CDS |
| TAAGAGTTTAAGGGGTCCCA+GGG | 0.604324 | 3.4:-78959148 | MS.gene045357:CDS |
| GGACCTAAGCCACCCAAGAA+GGG | 0.605482 | 3.4:-78959102 | MS.gene045357:CDS |
| TAGAAGATCATACCAGCCCT+GGG | 0.606806 | 3.4:+78959132 | None:intergenic |
| CCAAAGTTGATCATTTGTGG+TGG | 0.609653 | 3.4:-78959420 | MS.gene045357:CDS |
| GCACCAATCTGGTGGTTGTG+AGG | 0.609752 | 3.4:+78959006 | None:intergenic |
| GTTGTGAGGACCACCCTGAA+GGG | 0.610275 | 3.4:+78959020 | None:intergenic |
| GTCAACGTTCAACCTTACTC+CGG | 0.614352 | 3.4:-78959669 | MS.gene045357:CDS |
| TAGGGCTTCAATGACTGCGA+AGG | 0.618421 | 3.4:+78959833 | None:intergenic |
| GCCCCAGCTATGACTTCCAG+GGG | 0.620989 | 3.4:-78958425 | MS.gene045357:CDS |
| ACAACCCATAAGAGTTTAAG+GGG | 0.623565 | 3.4:-78959156 | MS.gene045357:CDS |
| ATGGATCCAGTTAGTGAATG+GGG | 0.624625 | 3.4:-78959963 | MS.gene045357:CDS |
| GTTTACCGGTCAAGCCAAGA+GGG | 0.625923 | 3.4:+78958824 | None:intergenic |
| CATGGTTACTATACTTCCGG+TGG | 0.629951 | 3.4:-78959555 | MS.gene045357:CDS |
| ATAGGCCTTGAACCCTGGTG+TGG | 0.630429 | 3.4:+78958957 | None:intergenic |
| GGTATGATCTTCTACCGGAA+GGG | 0.631495 | 3.4:-78959123 | MS.gene045357:CDS |
| CCTATCATAATCAATAAACC+CGG | 0.635056 | 3.4:+78959470 | None:intergenic |
| TGTTCACAGTAATGTTACAG+AGG | 0.637542 | 3.4:+78958686 | None:intergenic |
| TCAACCTTACTCCGGCTCAC+CGG | 0.640516 | 3.4:-78959661 | MS.gene045357:CDS |
| TGAGTCAAATGTCCACCAGA+AGG | 0.641882 | 3.4:+78959576 | None:intergenic |
| AGGTTGAACGTTGACACCCC+AGG | 0.642017 | 3.4:+78959677 | None:intergenic |
| GGTTGTGAGGACCACCCTGA+AGG | 0.642881 | 3.4:+78959019 | None:intergenic |
| ATGCCCGGTAACCGTTACTA+CGG | 0.643010 | 3.4:-78959777 | MS.gene045357:CDS |
| GGCGGCGTCGAGATGGAAGG+CGG | 0.644858 | 3.4:+78959701 | None:intergenic |
| CAGCAAGAGCACCAATCTGG+TGG | 0.647474 | 3.4:+78958998 | None:intergenic |
| CCCGGTAACCGTTACTACGG+CGG | 0.648521 | 3.4:-78959774 | MS.gene045357:CDS |
| ATAAGGTGAATTCGACAACC+GGG | 0.649213 | 3.4:-78959488 | MS.gene045357:CDS |
| CTCACCAACAAATATTCCGA+AGG | 0.651545 | 3.4:-78959801 | MS.gene045357:CDS |
| AGGCAATGAGTTCGATTCCG+CGG | 0.655674 | 3.4:+78959871 | None:intergenic |
| CCTATCATGAGGATTGAGAA+CGG | 0.656550 | 3.4:+78959617 | None:intergenic |
| TACCGGTCAAGCCAAGAGGG+CGG | 0.661729 | 3.4:+78958827 | None:intergenic |
| AGTTTACCGGTCAAGCCAAG+AGG | 0.668683 | 3.4:+78958823 | None:intergenic |
| AGCAGTGCCTTGGCACCTGG+AGG | 0.676842 | 3.4:-78958643 | MS.gene045357:CDS |
| ATAATACCTGAGCAGCAACA+AGG | 0.680074 | 3.4:+78959301 | None:intergenic |
| CTAGTGTGAGAGTTACTGCA+CGG | 0.681721 | 3.4:+78958360 | None:intergenic |
| AGTCCCATGATCCTATCATG+AGG | 0.682957 | 3.4:+78959606 | None:intergenic |
| ACCCCTGGAAGTCATAGCTG+GGG | 0.683408 | 3.4:+78958424 | None:intergenic |
| ATGGTTACTATACTTCCGGT+GGG | 0.689475 | 3.4:-78959554 | MS.gene045357:CDS |
| AGACAAGTTGCTGATAAGTG+TGG | 0.694051 | 3.4:-78959360 | MS.gene045357:CDS |
| GGATACAGTCTTGTCACTGG+AGG | 0.719260 | 3.4:-78958880 | MS.gene045357:CDS |
| TGAAACAGGCCACCACACCA+GGG | 0.729645 | 3.4:-78958969 | MS.gene045357:CDS |
| TTGAACGTTGACACCCCAGG+TGG | 0.772161 | 3.4:+78959680 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATAGAAAATGCATCAACAAT+TGG | + | chr3.4:78959427-78959446 | None:intergenic | 25.0% |
| ! | ATCAAAACTTTGCATAAACA+AGG | + | chr3.4:78959656-78959675 | None:intergenic | 25.0% |
| !! | GTTTATTGATTATGATAGGT+TGG | - | chr3.4:78958702-78958721 | MS.gene045357:CDS | 25.0% |
| !! | TCTACAAGTTATTAGTTTAC+CGG | + | chr3.4:78959361-78959380 | None:intergenic | 25.0% |
| AAATCATAAACTGCATTCTC+AGG | + | chr3.4:78959096-78959115 | None:intergenic | 30.0% | |
| AACAACCCATAAGAGTTTAA+GGG | - | chr3.4:78959011-78959030 | MS.gene045357:CDS | 30.0% | |
| CCTATCATAATCAATAAACC+CGG | + | chr3.4:78958701-78958720 | None:intergenic | 30.0% | |
| CTAGAGATTCAAAAGGAATA+TGG | - | chr3.4:78959827-78959846 | MS.gene045357:CDS | 30.0% | |
| TAAACAAGGACTTCCAATAT+TGG | + | chr3.4:78959642-78959661 | None:intergenic | 30.0% | |
| TGAAAATCATCTTGTCTTGT+GGG | - | chr3.4:78959314-78959333 | MS.gene045357:CDS | 30.0% | |
| TTGGGTTTGATTGTTAAAGT+TGG | - | chr3.4:78959397-78959416 | MS.gene045357:CDS | 30.0% | |
| ! | GGAATATGGTAAACTTTTGA+AGG | - | chr3.4:78959841-78959860 | MS.gene045357:CDS | 30.0% |
| ! | GGCGTTTTTCTTTTTCTATT+AGG | + | chr3.4:78958270-78958289 | None:intergenic | 30.0% |
| ! | TATTGATTATGATAGGTTGG+AGG | - | chr3.4:78958705-78958724 | MS.gene045357:CDS | 30.0% |
| ! | TTTCTTTTTCTATTAGGTCG+TGG | + | chr3.4:78958264-78958283 | None:intergenic | 30.0% |
| !! | ACTTTTGAAGGATTTCAACA+AGG | - | chr3.4:78959853-78959872 | MS.gene045357:CDS | 30.0% |
| !! | CTTTTGAAGGATTTCAACAA+GGG | - | chr3.4:78959854-78959873 | MS.gene045357:CDS | 30.0% |
| AAGTGCTTATCCTAGAGATT+GGG | - | chr3.4:78958771-78958790 | MS.gene045357:intron | 35.0% | |
| AATCCTCATGATAGGATCAT+GGG | - | chr3.4:78958559-78958578 | MS.gene045357:intron | 35.0% | |
| ACAACCCATAAGAGTTTAAG+GGG | - | chr3.4:78959012-78959031 | MS.gene045357:CDS | 35.0% | |
| ACTCATGGTTACTATACTTC+CGG | - | chr3.4:78958610-78958629 | MS.gene045357:intron | 35.0% | |
| ACTTCTCAACATCAGCTTTA+AGG | + | chr3.4:78959907-78959926 | None:intergenic | 35.0% | |
| AGAAAATGTTGCAATGTCGT+TGG | - | chr3.4:78959378-78959397 | MS.gene045357:CDS | 35.0% | |
| CAACAACCCATAAGAGTTTA+AGG | - | chr3.4:78959010-78959029 | MS.gene045357:CDS | 35.0% | |
| CTGAAAATCATCTTGTCTTG+TGG | - | chr3.4:78959313-78959332 | MS.gene045357:CDS | 35.0% | |
| GAAAATGTTGCAATGTCGTT+GGG | - | chr3.4:78959379-78959398 | MS.gene045357:CDS | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | - | chr3.4:78959267-78959286 | MS.gene045357:intron | 35.0% | |
| GTTGTCGAATTCACCTTATA+CGG | + | chr3.4:78958679-78958698 | None:intergenic | 35.0% | |
| TATAAGGTGAATTCGACAAC+CGG | - | chr3.4:78958679-78958698 | MS.gene045357:CDS | 35.0% | |
| TATCCTAGAGATTGGGATTA+TGG | - | chr3.4:78958778-78958797 | MS.gene045357:intron | 35.0% | |
| TCTCACACTAGAGATTCAAA+AGG | - | chr3.4:78959820-78959839 | MS.gene045357:CDS | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | - | chr3.4:78959266-78959285 | MS.gene045357:intron | 35.0% | |
| TGTGATATGGCTCATATTAG+TGG | - | chr3.4:78958844-78958863 | MS.gene045357:CDS | 35.0% | |
| TGTTCACAGTAATGTTACAG+AGG | + | chr3.4:78959485-78959504 | None:intergenic | 35.0% | |
| ! | AGACCAAAGTTGATCATTTG+TGG | - | chr3.4:78958745-78958764 | MS.gene045357:intron | 35.0% |
| ! | AGTTACGTTTTTGTGGATAC+AGG | - | chr3.4:78958948-78958967 | MS.gene045357:CDS | 35.0% |
| ! | CCGGGTTTATTGATTATGAT+AGG | - | chr3.4:78958698-78958717 | MS.gene045357:CDS | 35.0% |
| ! | TGCATTTTCTATACTCTTGC+AGG | - | chr3.4:78959435-78959454 | MS.gene045357:CDS | 35.0% |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | - | chr3.4:78958831-78958850 | MS.gene045357:CDS | 35.0% |
| ! | TTCGGAATATTTGTTGGTGA+GGG | + | chr3.4:78958368-78958387 | None:intergenic | 35.0% |
| !!! | GTGAACAAGAATGCTGTTTT+CGG | - | chr3.4:78959498-78959517 | MS.gene045357:CDS | 35.0% |
| ACGATGTCACAGAACTCAAA+GGG | + | chr3.4:78958985-78959004 | None:intergenic | 40.0% | |
| AGACAAGTTGCTGATAAGTG+TGG | - | chr3.4:78958808-78958827 | MS.gene045357:intron | 40.0% | |
| AGTCACCAGAAAGCCAATAT+TGG | - | chr3.4:78959626-78959645 | MS.gene045357:CDS | 40.0% | |
| AGTGTCTGAGCTAAAGTACA+AGG | - | chr3.4:78959958-78959977 | MS.gene045357:CDS | 40.0% | |
| ATAAGGTGAATTCGACAACC+GGG | - | chr3.4:78958680-78958699 | MS.gene045357:CDS | 40.0% | |
| ATAATACCTGAGCAGCAACA+AGG | + | chr3.4:78958870-78958889 | None:intergenic | 40.0% | |
| ATGGATCCAGTTAGTGAATG+GGG | - | chr3.4:78958205-78958224 | MS.gene045357:CDS | 40.0% | |
| ATGGTTACTATACTTCCGGT+GGG | - | chr3.4:78958614-78958633 | MS.gene045357:intron | 40.0% | |
| ATTTCCAAGTGCAACTGCAT+TGG | + | chr3.4:78959253-78959272 | None:intergenic | 40.0% | |
| CAATCCTCATGATAGGATCA+TGG | - | chr3.4:78958558-78958577 | MS.gene045357:intron | 40.0% | |
| CATGCCTTCGGAATATTTGT+TGG | + | chr3.4:78958374-78958393 | None:intergenic | 40.0% | |
| CCACCACAAATGATCAACTT+TGG | + | chr3.4:78958751-78958770 | None:intergenic | 40.0% | |
| CCTATCATGAGGATTGAGAA+CGG | + | chr3.4:78958554-78958573 | None:intergenic | 40.0% | |
| CTAGAGATTGGGATTATGGA+AGG | - | chr3.4:78958782-78958801 | MS.gene045357:intron | 40.0% | |
| CTATACTCTTGCAGGCAATA+AGG | - | chr3.4:78959443-78959462 | MS.gene045357:CDS | 40.0% | |
| CTATTAGGTCGTGGATTTCT+GGG | + | chr3.4:78958255-78958274 | None:intergenic | 40.0% | |
| CTCACCAACAAATATTCCGA+AGG | - | chr3.4:78958367-78958386 | MS.gene045357:CDS | 40.0% | |
| CTTCCATAATCCCAATCTCT+AGG | + | chr3.4:78958784-78958803 | None:intergenic | 40.0% | |
| TCAGCATCATTTGATATGCC+TGG | - | chr3.4:78959929-78959948 | MS.gene045357:CDS | 40.0% | |
| TCTATTAGGTCGTGGATTTC+TGG | + | chr3.4:78958256-78958275 | None:intergenic | 40.0% | |
| TGACATGAGCTTCTGTTAAC+AGG | - | chr3.4:78959719-78959738 | MS.gene045357:CDS | 40.0% | |
| TTGTTGCTGCTCAGGTATTA+TGG | - | chr3.4:78958869-78958888 | MS.gene045357:CDS | 40.0% | |
| ! | CCAAAGTTGATCATTTGTGG+TGG | - | chr3.4:78958748-78958767 | MS.gene045357:intron | 40.0% |
| ! | CTTCGGAATATTTGTTGGTG+AGG | + | chr3.4:78958369-78958388 | None:intergenic | 40.0% |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | - | chr3.4:78958663-78958682 | MS.gene045357:CDS | 40.0% |
| ! | GAAGGAGGTGAAATTTTCTG+AGG | + | chr3.4:78958320-78958339 | None:intergenic | 40.0% |
| ! | GAAGTGCTTATCCTAGAGAT+TGG | - | chr3.4:78958770-78958789 | MS.gene045357:intron | 40.0% |
| ! | GAGCTTGAGTTACGTTTTTG+TGG | - | chr3.4:78958941-78958960 | MS.gene045357:CDS | 40.0% |
| ! | TGTACTTTAGCTCAGACACT+AGG | + | chr3.4:78959958-78959977 | None:intergenic | 40.0% |
| !! | GACTTCCAATATTGGCTTTC+TGG | + | chr3.4:78959634-78959653 | None:intergenic | 40.0% |
| !! | TCTTGCTGTTGCTTTGAAAC+AGG | - | chr3.4:78959185-78959204 | MS.gene045357:CDS | 40.0% |
| AGTCCCATGATCCTATCATG+AGG | + | chr3.4:78958565-78958584 | None:intergenic | 45.0% | |
| ATAAGAGTTTAAGGGGTCCC+AGG | - | chr3.4:78959019-78959038 | MS.gene045357:CDS | 45.0% | |
| ATTGAGAACGGCAGTGTAAG+CGG | + | chr3.4:78958542-78958561 | None:intergenic | 45.0% | |
| CATGGTTACTATACTTCCGG+TGG | - | chr3.4:78958613-78958632 | MS.gene045357:intron | 45.0% | |
| CCGTTCTCAATCCTCATGAT+AGG | - | chr3.4:78958551-78958570 | MS.gene045357:intron | 45.0% | |
| CTAGTGTGAGAGTTACTGCA+CGG | + | chr3.4:78959811-78959830 | None:intergenic | 45.0% | |
| GACGATGTCACAGAACTCAA+AGG | + | chr3.4:78958986-78959005 | None:intergenic | 45.0% | |
| GGGACCCCTTAAACTCTTAT+GGG | + | chr3.4:78959019-78959038 | None:intergenic | 45.0% | |
| GGTATGATCTTCTACCGGAA+GGG | - | chr3.4:78959045-78959064 | MS.gene045357:CDS | 45.0% | |
| GTCAACGTTCAACCTTACTC+CGG | - | chr3.4:78958499-78958518 | MS.gene045357:intron | 45.0% | |
| GTGTTTCCCCATTCACTAAC+TGG | + | chr3.4:78958214-78958233 | None:intergenic | 45.0% | |
| TAAGAGTTTAAGGGGTCCCA+GGG | - | chr3.4:78959020-78959039 | MS.gene045357:CDS | 45.0% | |
| TACTCTTGCAGGCAATAAGG+TGG | - | chr3.4:78959446-78959465 | MS.gene045357:CDS | 45.0% | |
| TAGAAGATCATACCAGCCCT+GGG | + | chr3.4:78959039-78959058 | None:intergenic | 45.0% | |
| TCATGATAGGATCATGGGAC+TGG | - | chr3.4:78958564-78958583 | MS.gene045357:intron | 45.0% | |
| TCTGGGTCTACGGTTACTAA+TGG | + | chr3.4:78958238-78958257 | None:intergenic | 45.0% | |
| TGAGTCAAATGTCCACCAGA+AGG | + | chr3.4:78958595-78958614 | None:intergenic | 45.0% | |
| TGGGACCCCTTAAACTCTTA+TGG | + | chr3.4:78959020-78959039 | None:intergenic | 45.0% | |
| TGGTATGATCTTCTACCGGA+AGG | - | chr3.4:78959044-78959063 | MS.gene045357:CDS | 45.0% | |
| TTACCAATCCTTACTCCTCC+AGG | + | chr3.4:78959543-78959562 | None:intergenic | 45.0% | |
| TTCCGGTGGGAAGAAGATTT+CGG | - | chr3.4:78958627-78958646 | MS.gene045357:intron | 45.0% | |
| ! | AAATATTCCGAAGGCATGCC+CGG | - | chr3.4:78958376-78958395 | MS.gene045357:CDS | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | - | chr3.4:78959285-78959304 | MS.gene045357:intron | 45.0% |
| ! | AGCGGCAAATGTTTTCGATC+TGG | + | chr3.4:78958435-78958454 | None:intergenic | 45.0% |
| ! | TAGGTTGGAGGAGAAAGCTT+TGG | - | chr3.4:78958717-78958736 | MS.gene045357:intron | 45.0% |
| ! | TCTGGTGGACATTTGACTCA+TGG | - | chr3.4:78958595-78958614 | MS.gene045357:intron | 45.0% |
| !! | TGCATTGGCCTTAACTTGCT+TGG | + | chr3.4:78959238-78959257 | None:intergenic | 45.0% |
| AAGGCCAATGCAGTTGCACT+TGG | - | chr3.4:78959246-78959265 | MS.gene045357:intron | 50.0% | |
| AGCCGAAATCTTCTTCCCAC+CGG | + | chr3.4:78958632-78958651 | None:intergenic | 50.0% | |
| AGCTCAGACACTAGGAATCC+AGG | + | chr3.4:78959950-78959969 | None:intergenic | 50.0% | |
| AGGCAATGAGTTCGATTCCG+CGG | + | chr3.4:78958300-78958319 | None:intergenic | 50.0% | |
| AGTTTACCGGTCAAGCCAAG+AGG | + | chr3.4:78959348-78959367 | None:intergenic | 50.0% | |
| ATGCCCGGTAACCGTTACTA+CGG | - | chr3.4:78958391-78958410 | MS.gene045357:CDS | 50.0% | |
| ATGGGACTGGATCTACCTTC+TGG | - | chr3.4:78958577-78958596 | MS.gene045357:intron | 50.0% | |
| ATTCGTTGCCGCCGTAGTAA+CGG | + | chr3.4:78958405-78958424 | None:intergenic | 50.0% | |
| ATTCTCAGGCTGACCCTTCT+TGG | + | chr3.4:78959082-78959101 | None:intergenic | 50.0% | |
| GGCCTATGCCAAGCAAGTTA+AGG | - | chr3.4:78959227-78959246 | MS.gene045357:intron | 50.0% | |
| GTAGAAGATCATACCAGCCC+TGG | + | chr3.4:78959040-78959059 | None:intergenic | 50.0% | |
| GTTTACCGGTCAAGCCAAGA+GGG | + | chr3.4:78959347-78959366 | None:intergenic | 50.0% | |
| TAGGGCTTCAATGACTGCGA+AGG | + | chr3.4:78958338-78958357 | None:intergenic | 50.0% | |
| TGAGAGTTACTGCACGGTGA+AGG | + | chr3.4:78959805-78959824 | None:intergenic | 50.0% | |
| TTCGCAGTCATTGAAGCCCT+AGG | - | chr3.4:78958337-78958356 | MS.gene045357:CDS | 50.0% | |
| TTCTCAGGCTGACCCTTCTT+GGG | + | chr3.4:78959081-78959100 | None:intergenic | 50.0% | |
| TTTCGGTGATAGCAGTGCCT+TGG | - | chr3.4:78959515-78959534 | MS.gene045357:CDS | 50.0% | |
| ! | GGATACAGTCTTGTCACTGG+AGG | - | chr3.4:78959288-78959307 | MS.gene045357:intron | 50.0% |
| ! | GGGCTGGTATGATCTTCTAC+CGG | - | chr3.4:78959040-78959059 | MS.gene045357:CDS | 50.0% |
| ! | GTCGTGGATTTCTGGGTCTA+CGG | + | chr3.4:78958248-78958267 | None:intergenic | 50.0% |
| !! | CAACAGCAAGAGCACCAATC+TGG | + | chr3.4:78959176-78959195 | None:intergenic | 50.0% |
| !! | GGCCTTAACTTGCTTGGCAT+AGG | + | chr3.4:78959232-78959251 | None:intergenic | 50.0% |
| ACCCCTGGAAGTCATAGCTG+GGG | + | chr3.4:78959747-78959766 | None:intergenic | 55.0% | |
| AGACCCCTGGAAGTCATAGC+TGG | + | chr3.4:78959749-78959768 | None:intergenic | 55.0% | |
| AGCTATGACTTCCAGGGGTC+TGG | - | chr3.4:78959748-78959767 | MS.gene045357:CDS | 55.0% | |
| AGGTTGAACGTTGACACCCC+AGG | + | chr3.4:78958494-78958513 | None:intergenic | 55.0% | |
| ATAGGCCTTGAACCCTGGTG+TGG | + | chr3.4:78959214-78959233 | None:intergenic | 55.0% | |
| GAAAAACGCCGTCAATGCCG+CGG | - | chr3.4:78958280-78958299 | MS.gene045357:CDS | 55.0% | |
| GACCCCTGGAAGTCATAGCT+GGG | + | chr3.4:78959748-78959767 | None:intergenic | 55.0% | |
| GCACCAATCTGGTGGTTGTG+AGG | + | chr3.4:78959165-78959184 | None:intergenic | 55.0% | |
| GCACCTGGAGGAGTAAGGAT+TGG | - | chr3.4:78959537-78959556 | MS.gene045357:CDS | 55.0% | |
| GGACCTAAGCCACCCAAGAA+GGG | - | chr3.4:78959066-78959085 | MS.gene045357:CDS | 55.0% | |
| GGACTGGATCTACCTTCTGG+TGG | - | chr3.4:78958580-78958599 | MS.gene045357:intron | 55.0% | |
| GGCTTCAATGACTGCGAAGG+AGG | + | chr3.4:78958335-78958354 | None:intergenic | 55.0% | |
| GGTCCTCACAACCACCAGAT+TGG | - | chr3.4:78959159-78959178 | MS.gene045357:CDS | 55.0% | |
| GTGTAAGCGGCGAAATTCGC+CGG | + | chr3.4:78958529-78958548 | None:intergenic | 55.0% | |
| GTTGTGAGGACCACCCTGAA+GGG | + | chr3.4:78959151-78959170 | None:intergenic | 55.0% | |
| TCAACCTTACTCCGGCTCAC+CGG | - | chr3.4:78958507-78958526 | MS.gene045357:intron | 55.0% | |
| TGAAACAGGCCACCACACCA+GGG | - | chr3.4:78959199-78959218 | MS.gene045357:CDS | 55.0% | |
| TGACCCTTCTTGGGTGGCTT+AGG | + | chr3.4:78959072-78959091 | None:intergenic | 55.0% | |
| TGCCCCAGCTATGACTTCCA+GGG | - | chr3.4:78959742-78959761 | MS.gene045357:CDS | 55.0% | |
| TTCCAGGGGTCTGGTTGAGA+AGG | - | chr3.4:78959757-78959776 | MS.gene045357:CDS | 55.0% | |
| TTGAAACAGGCCACCACACC+AGG | - | chr3.4:78959198-78959217 | MS.gene045357:CDS | 55.0% | |
| TTGAACGTTGACACCCCAGG+TGG | + | chr3.4:78958491-78958510 | None:intergenic | 55.0% | |
| TTGGCATAGGCCTTGAACCC+TGG | + | chr3.4:78959219-78959238 | None:intergenic | 55.0% | |
| ! | GTTCGATTCCGCGGCATTGA+CGG | + | chr3.4:78958291-78958310 | None:intergenic | 55.0% |
| !! | CAGCAAGAGCACCAATCTGG+TGG | + | chr3.4:78959173-78959192 | None:intergenic | 55.0% |
| !! | GCTGTTTTCCCCTCCCTTCA+GGG | - | chr3.4:78959135-78959154 | MS.gene045357:CDS | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | - | chr3.4:78958861-78958880 | MS.gene045357:CDS | 55.0% |
| !!! | TGCTGTTTTCCCCTCCCTTC+AGG | - | chr3.4:78959134-78959153 | MS.gene045357:CDS | 55.0% |
| AACGTTGACACCCCAGGTGG+CGG | + | chr3.4:78958488-78958507 | None:intergenic | 60.0% | |
| ACGGTTACCGGGCATGCCTT+CGG | + | chr3.4:78958386-78958405 | None:intergenic | 60.0% | |
| AGTTTAAGGGGTCCCAGGGC+TGG | - | chr3.4:78959024-78959043 | MS.gene045357:CDS | 60.0% | |
| CCCGGTAACCGTTACTACGG+CGG | - | chr3.4:78958394-78958413 | MS.gene045357:CDS | 60.0% | |
| CCGCCGTAGTAACGGTTACC+GGG | + | chr3.4:78958397-78958416 | None:intergenic | 60.0% | |
| CCTTACTCCTCCAGGTGCCA+AGG | + | chr3.4:78959535-78959554 | None:intergenic | 60.0% | |
| CCTTGGCACCTGGAGGAGTA+AGG | - | chr3.4:78959532-78959551 | MS.gene045357:CDS | 60.0% | |
| GATAGCAGTGCCTTGGCACC+TGG | - | chr3.4:78959522-78959541 | MS.gene045357:CDS | 60.0% | |
| GCCCCAGCTATGACTTCCAG+GGG | - | chr3.4:78959743-78959762 | MS.gene045357:CDS | 60.0% | |
| GCCGCCGTAGTAACGGTTAC+CGG | + | chr3.4:78958398-78958417 | None:intergenic | 60.0% | |
| GGGACCTAAGCCACCCAAGA+AGG | - | chr3.4:78959065-78959084 | MS.gene045357:CDS | 60.0% | |
| GGTTGTGAGGACCACCCTGA+AGG | + | chr3.4:78959152-78959171 | None:intergenic | 60.0% | |
| GTCCTTCTCAACCAGACCCC+TGG | + | chr3.4:78959762-78959781 | None:intergenic | 60.0% | |
| GTGCCCCAGCTATGACTTCC+AGG | - | chr3.4:78959741-78959760 | MS.gene045357:CDS | 60.0% | |
| TACCGGTCAAGCCAAGAGGG+CGG | + | chr3.4:78959344-78959363 | None:intergenic | 60.0% | |
| TCAGGCTGACCCTTCTTGGG+TGG | + | chr3.4:78959078-78959097 | None:intergenic | 60.0% | |
| TGAGGACCACCCTGAAGGGA+GGG | + | chr3.4:78959147-78959166 | None:intergenic | 60.0% | |
| TGGGTGGCTTAGGTCCCTTC+CGG | + | chr3.4:78959062-78959081 | None:intergenic | 60.0% | |
| TTGTGGGATCTCCGCCCTCT+TGG | - | chr3.4:78959330-78959349 | MS.gene045357:CDS | 60.0% | |
| ! | GTTTTCCCCTCCCTTCAGGG+TGG | - | chr3.4:78959138-78959157 | MS.gene045357:CDS | 60.0% |
| !! | GTTGGTGAGGGCGCTTCCTA+GGG | + | chr3.4:78958356-78958375 | None:intergenic | 60.0% |
| !! | TGTTGGTGAGGGCGCTTCCT+AGG | + | chr3.4:78958357-78958376 | None:intergenic | 60.0% |
| AGCAGTGCCTTGGCACCTGG+AGG | - | chr3.4:78959525-78959544 | MS.gene045357:CDS | 65.0% | |
| GAGGACCACCCTGAAGGGAG+GGG | + | chr3.4:78959146-78959165 | None:intergenic | 65.0% | |
| GGCCACCACACCAGGGTTCA+AGG | - | chr3.4:78959206-78959225 | MS.gene045357:intron | 65.0% | |
| GGCCTTGAACCCTGGTGTGG+TGG | + | chr3.4:78959211-78959230 | None:intergenic | 65.0% | |
| GGCGAAATTCGCCGGTGAGC+CGG | + | chr3.4:78958521-78958540 | None:intergenic | 65.0% | |
| GTGAGGACCACCCTGAAGGG+AGG | + | chr3.4:78959148-78959167 | None:intergenic | 65.0% | |
| TTCGCCGGTGAGCCGGAGTA+AGG | + | chr3.4:78958514-78958533 | None:intergenic | 65.0% | |
| ! | CTCCGCCCTCTTGGCTTGAC+CGG | - | chr3.4:78959339-78959358 | MS.gene045357:CDS | 65.0% |
| CATCTCGACGCCGCCACCTG+GGG | - | chr3.4:78958475-78958494 | MS.gene045357:intron | 70.0% | |
| CCATCTCGACGCCGCCACCT+GGG | - | chr3.4:78958474-78958493 | MS.gene045357:intron | 70.0% | |
| TCCATCTCGACGCCGCCACC+TGG | - | chr3.4:78958473-78958492 | MS.gene045357:intron | 70.0% | |
| ! | AGGCGGTGAGAGCGCGTGAG+CGG | + | chr3.4:78958453-78958472 | None:intergenic | 70.0% |
| ! | GGCGGCGTCGAGATGGAAGG+CGG | + | chr3.4:78958470-78958489 | None:intergenic | 70.0% |
| ! | GGTGGCGGCGTCGAGATGGA+AGG | + | chr3.4:78958473-78958492 | None:intergenic | 70.0% |
| ! | CCCAGGTGGCGGCGTCGAGA+TGG | + | chr3.4:78958477-78958496 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 78958205 | 78959985 | 78958205 | ID=MS.gene045357 |
| chr3.4 | mRNA | 78958205 | 78959985 | 78958205 | ID=MS.gene045357.t1;Parent=MS.gene045357 |
| chr3.4 | exon | 78959308 | 78959985 | 78959308 | ID=MS.gene045357.t1.exon1;Parent=MS.gene045357.t1 |
| chr3.4 | CDS | 78959308 | 78959985 | 78959308 | ID=cds.MS.gene045357.t1;Parent=MS.gene045357.t1 |
| chr3.4 | exon | 78958830 | 78959220 | 78958830 | ID=MS.gene045357.t1.exon2;Parent=MS.gene045357.t1 |
| chr3.4 | CDS | 78958830 | 78959220 | 78958830 | ID=cds.MS.gene045357.t1;Parent=MS.gene045357.t1 |
| chr3.4 | exon | 78958632 | 78958733 | 78958632 | ID=MS.gene045357.t1.exon3;Parent=MS.gene045357.t1 |
| chr3.4 | CDS | 78958632 | 78958733 | 78958632 | ID=cds.MS.gene045357.t1;Parent=MS.gene045357.t1 |
| chr3.4 | exon | 78958205 | 78958449 | 78958205 | ID=MS.gene045357.t1.exon4;Parent=MS.gene045357.t1 |
| chr3.4 | CDS | 78958205 | 78958449 | 78958205 | ID=cds.MS.gene045357.t1;Parent=MS.gene045357.t1 |
| Gene Sequence |
| Protein sequence |
