Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046976.t1 | XP_003621262.1 | 97.9 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 1.60E-282 | 981.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046976.t1 | P58223 | 30.6 | 533 | 303 | 16 | 25 | 511 | 13 | 524 | 2.8e-49 | 198.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046976.t1 | G7L217 | 97.9 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 1.2e-282 | 981.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36348 | MS.gene046976 | PPI |
| MS.gene72664 | MS.gene046976 | PPI |
| MS.gene85146 | MS.gene046976 | PPI |
| MS.gene79559 | MS.gene046976 | PPI |
| MS.gene046976 | MS.gene86539 | PPI |
| MS.gene046976 | MS.gene76530 | PPI |
| MS.gene021743 | MS.gene046976 | PPI |
| MS.gene65337 | MS.gene046976 | PPI |
| MS.gene64896 | MS.gene046976 | PPI |
| MS.gene046976 | MS.gene045052 | PPI |
| MS.gene85145 | MS.gene046976 | PPI |
| MS.gene86533 | MS.gene046976 | PPI |
| MS.gene069865 | MS.gene046976 | PPI |
| MS.gene36347 | MS.gene046976 | PPI |
| MS.gene070627 | MS.gene046976 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046976.t1 | MTR_7g011080 | 97.806 | 547 | 12 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1079 |
| MS.gene046976.t1 | MTR_6g012630 | 69.455 | 550 | 150 | 9 | 1 | 546 | 1 | 536 | 0.0 | 679 |
| MS.gene046976.t1 | MTR_6g012630 | 69.455 | 550 | 150 | 9 | 1 | 546 | 1 | 536 | 0.0 | 679 |
| MS.gene046976.t1 | MTR_6g012630 | 70.387 | 439 | 114 | 7 | 1 | 435 | 1 | 427 | 0.0 | 566 |
| MS.gene046976.t1 | MTR_6g012630 | 30.851 | 188 | 113 | 3 | 299 | 472 | 50 | 234 | 7.50e-21 | 95.9 |
| MS.gene046976.t1 | MTR_2g019090 | 32.787 | 549 | 301 | 16 | 21 | 524 | 22 | 547 | 1.14e-73 | 246 |
| MS.gene046976.t1 | MTR_2g019090 | 27.184 | 309 | 167 | 8 | 47 | 325 | 311 | 591 | 9.01e-24 | 105 |
| MS.gene046976.t1 | MTR_2g019090 | 32.605 | 549 | 301 | 17 | 21 | 524 | 22 | 546 | 9.43e-72 | 241 |
| MS.gene046976.t1 | MTR_2g019090 | 26.437 | 348 | 198 | 8 | 47 | 364 | 310 | 629 | 1.08e-26 | 114 |
| MS.gene046976.t1 | MTR_3g110650 | 34.623 | 491 | 232 | 11 | 27 | 459 | 15 | 474 | 3.08e-68 | 233 |
| MS.gene046976.t1 | MTR_4g093650 | 34.505 | 455 | 248 | 12 | 32 | 459 | 4 | 435 | 7.77e-65 | 222 |
| MS.gene046976.t1 | MTR_4g093650 | 29.394 | 330 | 171 | 10 | 46 | 329 | 263 | 576 | 1.71e-26 | 114 |
| MS.gene046976.t1 | MTR_4g008080 | 31.333 | 450 | 240 | 13 | 24 | 464 | 3 | 392 | 3.53e-54 | 193 |
| MS.gene046976.t1 | MTR_3g091800 | 28.571 | 434 | 279 | 9 | 49 | 459 | 63 | 488 | 1.10e-45 | 170 |
| MS.gene046976.t1 | MTR_3g091800 | 25.485 | 361 | 220 | 10 | 3 | 346 | 293 | 621 | 2.41e-20 | 95.1 |
| MS.gene046976.t1 | MTR_3g091800 | 35.263 | 190 | 98 | 6 | 288 | 455 | 53 | 239 | 3.39e-19 | 91.7 |
| MS.gene046976.t1 | MTR_2g009650 | 29.505 | 505 | 255 | 16 | 25 | 459 | 27 | 500 | 5.85e-45 | 169 |
| MS.gene046976.t1 | MTR_5g031720 | 29.505 | 444 | 285 | 10 | 39 | 471 | 29 | 455 | 1.77e-40 | 155 |
| MS.gene046976.t1 | MTR_7g082290 | 50.888 | 169 | 48 | 5 | 358 | 526 | 12 | 145 | 1.19e-32 | 124 |
| MS.gene046976.t1 | MTR_7g080630 | 28.621 | 290 | 150 | 9 | 48 | 331 | 99 | 337 | 5.09e-26 | 110 |
| MS.gene046976.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 9.93e-14 | 73.6 |
| MS.gene046976.t1 | MTR_7g080630 | 32.979 | 188 | 109 | 4 | 48 | 231 | 99 | 273 | 4.41e-25 | 105 |
| MS.gene046976.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 1.07e-13 | 72.4 |
| MS.gene046976.t1 | MTR_7g080630 | 32.979 | 188 | 109 | 4 | 48 | 231 | 99 | 273 | 1.08e-24 | 105 |
| MS.gene046976.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 1.58e-13 | 72.0 |
| MS.gene046976.t1 | MTR_1g070380 | 35.955 | 178 | 101 | 3 | 48 | 225 | 164 | 328 | 6.74e-23 | 102 |
| MS.gene046976.t1 | MTR_1g070380 | 30.508 | 177 | 116 | 2 | 291 | 461 | 160 | 335 | 3.53e-15 | 79.0 |
| MS.gene046976.t1 | MTR_7g115340 | 33.708 | 178 | 101 | 4 | 48 | 225 | 46 | 206 | 5.22e-22 | 99.4 |
| MS.gene046976.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 285 | 461 | 36 | 213 | 8.94e-16 | 80.1 |
| MS.gene046976.t1 | MTR_7g115340 | 25.816 | 337 | 177 | 10 | 48 | 334 | 114 | 427 | 9.03e-22 | 99.0 |
| MS.gene046976.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 285 | 461 | 104 | 281 | 1.45e-15 | 79.7 |
| MS.gene046976.t1 | MTR_1g070380 | 35.754 | 179 | 101 | 4 | 48 | 225 | 164 | 329 | 1.52e-21 | 98.6 |
| MS.gene046976.t1 | MTR_1g070380 | 30.899 | 178 | 115 | 3 | 291 | 461 | 160 | 336 | 2.53e-14 | 76.3 |
| MS.gene046976.t1 | MTR_2g038020 | 33.520 | 179 | 107 | 2 | 48 | 226 | 69 | 235 | 1.11e-20 | 95.5 |
| MS.gene046976.t1 | MTR_2g038020 | 30.729 | 192 | 122 | 2 | 285 | 470 | 59 | 245 | 1.46e-17 | 85.9 |
| MS.gene046976.t1 | MTR_4g127380 | 34.518 | 197 | 116 | 3 | 30 | 226 | 26 | 209 | 2.34e-20 | 94.0 |
| MS.gene046976.t1 | MTR_4g127380 | 31.217 | 189 | 119 | 2 | 288 | 470 | 36 | 219 | 4.13e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046976.t1 | AT5G15270 | 60.111 | 539 | 190 | 12 | 11 | 547 | 17 | 532 | 0.0 | 619 |
| MS.gene046976.t1 | AT5G15270 | 60.227 | 528 | 185 | 12 | 11 | 536 | 17 | 521 | 0.0 | 608 |
| MS.gene046976.t1 | AT5G15270 | 60.227 | 528 | 185 | 12 | 11 | 536 | 17 | 521 | 0.0 | 608 |
| MS.gene046976.t1 | AT1G14170 | 51.812 | 469 | 194 | 9 | 26 | 492 | 25 | 463 | 4.91e-141 | 416 |
| MS.gene046976.t1 | AT1G14170 | 52.106 | 451 | 188 | 7 | 44 | 492 | 14 | 438 | 9.30e-140 | 412 |
| MS.gene046976.t1 | AT1G14170 | 52.349 | 447 | 185 | 7 | 48 | 492 | 10 | 430 | 5.48e-139 | 410 |
| MS.gene046976.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 8.65e-72 | 242 |
| MS.gene046976.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.41e-26 | 112 |
| MS.gene046976.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 8.65e-72 | 242 |
| MS.gene046976.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.41e-26 | 112 |
| MS.gene046976.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 8.65e-72 | 242 |
| MS.gene046976.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.41e-26 | 112 |
| MS.gene046976.t1 | AT5G46190 | 35.408 | 466 | 245 | 13 | 46 | 471 | 39 | 488 | 3.63e-71 | 241 |
| MS.gene046976.t1 | AT5G46190 | 28.254 | 315 | 150 | 10 | 52 | 323 | 320 | 601 | 1.65e-23 | 105 |
| MS.gene046976.t1 | AT4G18375 | 30.796 | 565 | 300 | 21 | 23 | 537 | 7 | 530 | 1.82e-64 | 219 |
| MS.gene046976.t1 | AT4G18375 | 31.327 | 565 | 297 | 22 | 23 | 537 | 7 | 530 | 1.61e-63 | 219 |
| MS.gene046976.t1 | AT4G18375 | 27.640 | 322 | 166 | 10 | 47 | 346 | 310 | 586 | 2.10e-24 | 107 |
| MS.gene046976.t1 | AT1G51580 | 31.798 | 456 | 256 | 13 | 36 | 459 | 5 | 437 | 1.44e-55 | 197 |
| MS.gene046976.t1 | AT1G51580 | 28.283 | 198 | 121 | 5 | 30 | 227 | 258 | 434 | 3.48e-21 | 97.8 |
| MS.gene046976.t1 | AT5G53060 | 30.684 | 453 | 263 | 12 | 38 | 461 | 57 | 487 | 4.70e-52 | 187 |
| MS.gene046976.t1 | AT5G53060 | 29.612 | 206 | 121 | 6 | 23 | 225 | 296 | 480 | 4.22e-17 | 85.1 |
| MS.gene046976.t1 | AT5G53060 | 30.684 | 453 | 263 | 12 | 38 | 461 | 57 | 487 | 3.13e-51 | 186 |
| MS.gene046976.t1 | AT5G53060 | 24.507 | 355 | 214 | 12 | 23 | 346 | 296 | 627 | 4.73e-17 | 85.1 |
| MS.gene046976.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.21e-39 | 140 |
| MS.gene046976.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.21e-39 | 140 |
| MS.gene046976.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.21e-39 | 140 |
| MS.gene046976.t1 | AT2G22600 | 27.897 | 466 | 286 | 14 | 26 | 462 | 2 | 446 | 4.25e-33 | 134 |
| MS.gene046976.t1 | AT4G18375 | 33.688 | 282 | 130 | 11 | 264 | 537 | 85 | 317 | 1.31e-29 | 120 |
| MS.gene046976.t1 | AT4G18375 | 27.794 | 349 | 170 | 13 | 47 | 373 | 97 | 385 | 1.54e-25 | 108 |
| MS.gene046976.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 6.75e-27 | 116 |
| MS.gene046976.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.35e-26 | 114 |
| MS.gene046976.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.06e-23 | 103 |
| MS.gene046976.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 3.67e-14 | 76.3 |
| MS.gene046976.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 7.06e-27 | 115 |
| MS.gene046976.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.41e-26 | 114 |
| MS.gene046976.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.61e-23 | 103 |
| MS.gene046976.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 4.10e-14 | 75.9 |
| MS.gene046976.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 8.07e-27 | 115 |
| MS.gene046976.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.43e-26 | 114 |
| MS.gene046976.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.53e-23 | 103 |
| MS.gene046976.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 4.13e-14 | 75.9 |
| MS.gene046976.t1 | AT5G09560 | 25.878 | 541 | 291 | 20 | 51 | 509 | 32 | 544 | 1.80e-24 | 107 |
| MS.gene046976.t1 | AT5G09560 | 27.982 | 218 | 125 | 6 | 16 | 228 | 279 | 469 | 5.31e-16 | 81.6 |
| MS.gene046976.t1 | AT3G04610 | 33.146 | 178 | 105 | 2 | 48 | 225 | 162 | 325 | 9.41e-24 | 105 |
| MS.gene046976.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 155 | 332 | 1.06e-16 | 83.6 |
| MS.gene046976.t1 | AT3G04610 | 33.146 | 178 | 105 | 2 | 48 | 225 | 162 | 325 | 9.41e-24 | 105 |
| MS.gene046976.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 155 | 332 | 1.06e-16 | 83.6 |
| MS.gene046976.t1 | AT3G04610 | 34.270 | 178 | 103 | 3 | 48 | 225 | 186 | 349 | 1.02e-23 | 105 |
| MS.gene046976.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 179 | 356 | 1.19e-16 | 83.6 |
| MS.gene046976.t1 | AT3G04610 | 34.270 | 178 | 103 | 3 | 48 | 225 | 186 | 349 | 1.02e-23 | 105 |
| MS.gene046976.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 179 | 356 | 1.19e-16 | 83.6 |
| MS.gene046976.t1 | AT4G26000 | 32.022 | 178 | 109 | 2 | 48 | 225 | 73 | 238 | 1.05e-21 | 99.0 |
| MS.gene046976.t1 | AT4G26000 | 32.222 | 180 | 114 | 3 | 288 | 460 | 66 | 244 | 3.64e-15 | 78.6 |
| MS.gene046976.t1 | AT5G04430 | 26.299 | 308 | 168 | 12 | 28 | 331 | 17 | 269 | 5.68e-12 | 67.4 |
| MS.gene046976.t1 | AT5G04430 | 26.688 | 311 | 184 | 14 | 28 | 331 | 17 | 290 | 4.31e-11 | 65.1 |
Find 0 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAAAAAAATTAATTTT+TGG | + | 51522:8726-8745 | MS.gene046976:intron | 0.0% |
| !! | AAAGAATATGATATAATATT+TGG | + | 51522:8995-9014 | MS.gene046976:intron | 10.0% |
| !! | AATAAAAAAAATCACTTGTT+AGG | - | 51522:9642-9661 | MS.gene046976:intergenic | 15.0% |
| !! | TTATTCAATGAATCTAAAAA+TGG | - | 51522:9568-9587 | MS.gene046976:intergenic | 15.0% |
| !! | TTTAATTATTGTTTCATATG+CGG | + | 51522:12242-12261 | MS.gene046976:intron | 15.0% |
| !!! | AAGCTAATATTTTCAAATAA+CGG | + | 51522:10287-10306 | MS.gene046976:intron | 15.0% |
| !!! | ATGTATCTAAAGTATATTAT+AGG | - | 51522:9604-9623 | MS.gene046976:intergenic | 15.0% |
| !!! | TTTTTTTTTGCTTATAATAG+TGG | - | 51522:9297-9316 | MS.gene046976:intergenic | 15.0% |
| !! | ACAAAATATCAGAAAGATTA+GGG | - | 51522:9736-9755 | MS.gene046976:intergenic | 20.0% |
| !! | GTGGTATAATAAATCAAATT+AGG | + | 51522:11297-11316 | MS.gene046976:CDS | 20.0% |
| !! | TAAAATCCTGGAAAAATTAA+TGG | - | 51522:12174-12193 | MS.gene046976:intergenic | 20.0% |
| !! | TATAATAAATCAAATTAGGC+AGG | + | 51522:11301-11320 | MS.gene046976:CDS | 20.0% |
| !! | TGAATCACAAGTAATAATAT+TGG | + | 51522:9449-9468 | MS.gene046976:intron | 20.0% |
| !!! | AATCAATTTGTTTTGTCATA+TGG | + | 51522:11435-11454 | MS.gene046976:intron | 20.0% |
| !!! | ATCAATTTGTTTTGTCATAT+GGG | + | 51522:11436-11455 | MS.gene046976:intron | 20.0% |
| !!! | ATTTTATGAGTTATGCTATT+GGG | + | 51522:8855-8874 | MS.gene046976:intron | 20.0% |
| !!! | TATTTTATGAGTTATGCTAT+TGG | + | 51522:8854-8873 | MS.gene046976:intron | 20.0% |
| ! | AATATTTGGTATTATCGAGT+CGG | + | 51522:9009-9028 | MS.gene046976:intron | 25.0% |
| ! | ACATACAACAATTTCTCATT+CGG | - | 51522:10926-10945 | MS.gene046976:intergenic | 25.0% |
| ! | ATAGCAAAGTAGAATTTGAA+CGG | + | 51522:10469-10488 | MS.gene046976:intron | 25.0% |
| ! | CACAAAATATCAGAAAGATT+AGG | - | 51522:9737-9756 | MS.gene046976:intergenic | 25.0% |
| ! | TTATTATAATAGTGACCAGA+GGG | + | 51522:9657-9676 | MS.gene046976:intron | 25.0% |
| ! | TTTATTATAATAGTGACCAG+AGG | + | 51522:9656-9675 | MS.gene046976:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAG+TGG | - | 51522:10092-10111 | MS.gene046976:intergenic | 25.0% |
| !! | TTACAACCATTAATTTTTCC+AGG | + | 51522:12165-12184 | MS.gene046976:intron | 25.0% |
| !! | TTCTCAATGCTTTTAGATTT+CGG | + | 51522:11868-11887 | MS.gene046976:intron | 25.0% |
| !! | TTGTGATGAACCTTTTTAAT+TGG | + | 51522:9966-9985 | MS.gene046976:intron | 25.0% |
| !!! | AAATATCAAGGTTGATAGTT+CGG | + | 51522:11334-11353 | MS.gene046976:CDS | 25.0% |
| !!! | TCAAATGATTTTGAAGATTC+TGG | + | 51522:8588-8607 | MS.gene046976:CDS | 25.0% |
| !!! | TGGTTTTTTGCTTATAATAG+TGG | - | 51522:9548-9567 | MS.gene046976:intergenic | 25.0% |
| !!! | TGTGATGAACCTTTTTAATT+GGG | + | 51522:9967-9986 | MS.gene046976:intron | 25.0% |
| AATCTACAGCCCAATTAAAA+AGG | - | 51522:9979-9998 | MS.gene046976:intergenic | 30.0% | |
| ATATTGATCATGATCCACTT+TGG | + | 51522:10075-10094 | MS.gene046976:intron | 30.0% | |
| ATATTTGGTATTATCGAGTC+GGG | + | 51522:9010-9029 | MS.gene046976:intron | 30.0% | |
| ATTAGAGTTTCTCAGTGTAT+GGG | + | 51522:8755-8774 | MS.gene046976:intron | 30.0% | |
| GCGTAATTCTTTAAGCTATT+TGG | + | 51522:8904-8923 | MS.gene046976:intron | 30.0% | |
| GTATTAAATAGCATCCACAT+GGG | - | 51522:10500-10519 | MS.gene046976:intergenic | 30.0% | |
| TACGAAAACAACTTACTGTT+CGG | - | 51522:10677-10696 | MS.gene046976:intergenic | 30.0% | |
| TATAGAGCCTCTATTTGAAT+CGG | - | 51522:10759-10778 | MS.gene046976:intergenic | 30.0% | |
| TATTAGAGTTTCTCAGTGTA+TGG | + | 51522:8754-8773 | MS.gene046976:intron | 30.0% | |
| TATTCTTATTCTGATGGCTA+TGG | + | 51522:12079-12098 | MS.gene046976:CDS | 30.0% | |
| TTGTGATCTCTAATGTTATC+AGG | + | 51522:9752-9771 | MS.gene046976:intron | 30.0% | |
| ! | ATCAAATTTTATGCCGTGTT+TGG | + | 51522:9414-9433 | MS.gene046976:intron | 30.0% |
| ! | CATCTTCAGTTGCAATTTTA+GGG | - | 51522:11744-11763 | MS.gene046976:intergenic | 30.0% |
| ! | GAGAGCAAATCTTTTTGATA+AGG | + | 51522:11940-11959 | MS.gene046976:CDS | 30.0% |
| ! | TCATCTTCAGTTGCAATTTT+AGG | - | 51522:11745-11764 | MS.gene046976:intergenic | 30.0% |
| ! | TCTCAATGCTTTTAGATTTC+GGG | + | 51522:11869-11888 | MS.gene046976:intron | 30.0% |
| ! | TTTTTGCTTATAATAGTGGC+CGG | - | 51522:9293-9312 | MS.gene046976:intergenic | 30.0% |
| !! | TTTTTCCAGGATTTTAAGTG+CGG | + | 51522:12178-12197 | MS.gene046976:intron | 30.0% |
| !!! | AGATTGACAACATTTTTTCC+TGG | + | 51522:10593-10612 | MS.gene046976:intron | 30.0% |
| !!! | TGATGTCTTTTTTGGGAAAT+CGG | + | 51522:11806-11825 | MS.gene046976:intron | 30.0% |
| AAATTACTAGTTACACCCTC+TGG | - | 51522:9675-9694 | MS.gene046975:intergenic | 35.0% | |
| AATCAAATTAGGCAGGATTC+TGG | + | 51522:11308-11327 | MS.gene046976:CDS | 35.0% | |
| AATGTTGTCAATCCAGATCA+CGG | - | 51522:10332-10351 | MS.gene046976:intergenic | 35.0% | |
| ACCATCTTTGCTTACAATAG+TGG | + | 51522:9325-9344 | MS.gene046976:intron | 35.0% | |
| ACGAAAACAACTTACTGTTC+GGG | - | 51522:10676-10695 | MS.gene046976:intergenic | 35.0% | |
| AGCTTATGGAAGTTATGCTA+CGG | + | 51522:12291-12310 | MS.gene046976:CDS | 35.0% | |
| ATCAAATTAGGCAGGATTCT+GGG | + | 51522:11309-11328 | MS.gene046976:CDS | 35.0% | |
| ATGAGTGTTTGTGTCATGTT+TGG | + | 51522:9155-9174 | MS.gene046976:intron | 35.0% | |
| CAATCATTACTGAGATGAGA+AGG | + | 51522:11677-11696 | MS.gene046976:CDS | 35.0% | |
| CCTGAATCAATGTTGTCAAA+TGG | + | 51522:10247-10266 | MS.gene046976:intron | 35.0% | |
| CGTATTAAATAGCATCCACA+TGG | - | 51522:10501-10520 | MS.gene046976:intergenic | 35.0% | |
| CTTCATTTGTGAAACTGTTC+AGG | - | 51522:10706-10725 | MS.gene046976:intergenic | 35.0% | |
| GAATCAATGTTGTCAAATGG+CGG | + | 51522:10250-10269 | MS.gene046976:intron | 35.0% | |
| GAGAAAGTTGAAAGAGATTC+TGG | + | 51522:11583-11602 | MS.gene046976:CDS | 35.0% | |
| GCTATTGAGATTGTTGAATC+TGG | + | 51522:9234-9253 | MS.gene046976:intron | 35.0% | |
| GGATTATTCAGTGTCATATC+TGG | + | 51522:8876-8895 | MS.gene046976:intron | 35.0% | |
| GGCAGATTGTTCAGAATATA+AGG | + | 51522:9850-9869 | MS.gene046976:CDS | 35.0% | |
| GGGCATAAGAAATGATTGAA+TGG | + | 51522:11456-11475 | MS.gene046976:intron | 35.0% | |
| GTTATGTGAAATGTGTCTCT+TGG | - | 51522:8390-8409 | MS.gene046976:intergenic | 35.0% | |
| GTTCAACCACTCATGTAAAA+TGG | - | 51522:10555-10574 | MS.gene046976:intergenic | 35.0% | |
| TAACTTCCATAAGCTCCATA+AGG | - | 51522:12286-12305 | MS.gene046976:intergenic | 35.0% | |
| TAGCAGTTGGACAAACAAAT+CGG | - | 51522:11250-11269 | MS.gene046976:intergenic | 35.0% | |
| TGAAGATGAAGACGTTGATA+TGG | + | 51522:8686-8705 | MS.gene046976:CDS | 35.0% | |
| TGACTGCTTAATAGCCATTT+CGG | + | 51522:11370-11389 | MS.gene046976:CDS | 35.0% | |
| TGATCTCTAATGTTATCAGG+TGG | + | 51522:9755-9774 | MS.gene046976:intron | 35.0% | |
| TGCAACTGAAGATGATGAAA+TGG | + | 51522:11750-11769 | MS.gene046976:CDS | 35.0% | |
| TGCTTATAATAGTGGCCATA+GGG | - | 51522:9289-9308 | MS.gene046976:intergenic | 35.0% | |
| TGTGTTTATGCAGTTCTTTG+AGG | + | 51522:11507-11526 | MS.gene046976:intron | 35.0% | |
| TTAGGATTCTTAAGGATGAC+CGG | + | 51522:9892-9911 | MS.gene046976:CDS | 35.0% | |
| TTATAATTCACTCACAGACG+CGG | - | 51522:9184-9203 | MS.gene046976:intergenic | 35.0% | |
| TTCAACTATGAAGGTAGAGA+TGG | + | 51522:12034-12053 | MS.gene046976:CDS | 35.0% | |
| TTGATCCTCCTTTACCAATA+AGG | - | 51522:11660-11679 | MS.gene046976:intergenic | 35.0% | |
| TTGCTTATAATAGTGGCCAT+AGG | - | 51522:9290-9309 | MS.gene046976:intergenic | 35.0% | |
| ! | AAACCACCATTTTACATGAG+TGG | + | 51522:10546-10565 | MS.gene046976:intron | 35.0% |
| ! | AAATGAGCCGATTCAAATAG+AGG | + | 51522:10749-10768 | MS.gene046976:intron | 35.0% |
| ! | ACATTTTCCTGGAGAGTTTA+TGG | + | 51522:10347-10366 | MS.gene046976:intron | 35.0% |
| ! | ATTGGTTGCCTTATTGGTAA+AGG | + | 51522:11649-11668 | MS.gene046976:CDS | 35.0% |
| ! | CTCAATGCTTTTAGATTTCG+GGG | + | 51522:11870-11889 | MS.gene046976:intron | 35.0% |
| ! | GTTCTTTGAGGATTCATTCT+CGG | + | 51522:11519-11538 | MS.gene046976:intron | 35.0% |
| ! | TCAATGCTTTTAGATTTCGG+GGG | + | 51522:11871-11890 | MS.gene046976:intron | 35.0% |
| ! | TGAGATTGCTGTTGTGAAAA+AGG | + | 51522:10980-10999 | MS.gene046976:CDS | 35.0% |
| !! | ATTGGAGGTGTTATAGGTAA+GGG | + | 51522:11272-11291 | MS.gene046976:CDS | 35.0% |
| !! | CCATTTGACAACATTGATTC+AGG | - | 51522:10250-10269 | MS.gene046976:intergenic | 35.0% |
| !! | GTTGTTTTCATAAGTTGTCC+TGG | + | 51522:10400-10419 | MS.gene046976:intron | 35.0% |
| !!! | CATTTTTTCCTGGAGAGTTA+TGG | + | 51522:10603-10622 | MS.gene046976:intron | 35.0% |
| !!! | GCTTGAGTGATGTCTTTTTT+GGG | + | 51522:11799-11818 | MS.gene046976:intron | 35.0% |
| !!! | TGCTTGAGTGATGTCTTTTT+TGG | + | 51522:11798-11817 | MS.gene046976:intron | 35.0% |
| AATCGGACTGAAAACTCCAT+CGG | - | 51522:11233-11252 | MS.gene046976:intergenic | 40.0% | |
| AATGTTATCAGGTGGATGGA+GGG | + | 51522:9763-9782 | MS.gene046976:intron | 40.0% | |
| ACAGACATGAACACCAAACA+CGG | - | 51522:9430-9449 | MS.gene046976:intergenic | 40.0% | |
| ACTTACTTCCATAACTCTCC+AGG | - | 51522:10614-10633 | MS.gene046976:intergenic | 40.0% | |
| AGCAAATGTTGAGTACGTGA+AGG | - | 51522:11041-11060 | MS.gene046976:intergenic | 40.0% | |
| ATCAGATTGGGTGTGTGATT+GGG | + | 51522:9820-9839 | MS.gene046976:CDS | 40.0% | |
| ATGGAAGTTATGCTACGGAA+CGG | + | 51522:12296-12315 | MS.gene046976:CDS | 40.0% | |
| CAACCACTCATGTAAAATGG+TGG | - | 51522:10552-10571 | MS.gene046976:intergenic | 40.0% | |
| CAGAATATAAGGAGTGAGAC+TGG | + | 51522:9861-9880 | MS.gene046976:CDS | 40.0% | |
| CCAGATGGTTTCAACTATGA+AGG | + | 51522:12025-12044 | MS.gene046976:CDS | 40.0% | |
| CCTTCATAGTTGAAACCATC+TGG | - | 51522:12028-12047 | MS.gene046976:intergenic | 40.0% | |
| CTCTAATGTTATCAGGTGGA+TGG | + | 51522:9759-9778 | MS.gene046976:intron | 40.0% | |
| CTTACTTCCATAAACTCTCC+AGG | - | 51522:10357-10376 | MS.gene046976:intergenic | 40.0% | |
| GAGATTGTTGAATCTGGTGT+CGG | + | 51522:9240-9259 | MS.gene046976:intron | 40.0% | |
| GCAAATGTTGAGTACGTGAA+GGG | - | 51522:11040-11059 | MS.gene046976:intergenic | 40.0% | |
| GCCACTATTGTAAGCAAAGA+TGG | - | 51522:9329-9348 | MS.gene046976:intergenic | 40.0% | |
| GGATTATTGTCTGTGTGATG+AGG | + | 51522:8925-8944 | MS.gene046976:intron | 40.0% | |
| GGTGGCTATTCTTATTCTGA+TGG | + | 51522:12073-12092 | MS.gene046976:CDS | 40.0% | |
| GTATTCTCTCTTTCACTAGC+CGG | + | 51522:11605-11624 | MS.gene046976:CDS | 40.0% | |
| GTTGTCAATCTCACCCAAAA+TGG | - | 51522:10584-10603 | MS.gene046976:intergenic | 40.0% | |
| GTTTGTCCAACTGCTAACAT+TGG | + | 51522:11254-11273 | MS.gene046976:CDS | 40.0% | |
| TAACATCCGCATCCTATCTA+AGG | + | 51522:11711-11730 | MS.gene046976:CDS | 40.0% | |
| TAATGTTATCAGGTGGATGG+AGG | + | 51522:9762-9781 | MS.gene046976:intron | 40.0% | |
| TCAAATTAGGCAGGATTCTG+GGG | + | 51522:11310-11329 | MS.gene046976:CDS | 40.0% | |
| TCAATCCAGATCACGGAAAA+TGG | - | 51522:10325-10344 | MS.gene046976:intergenic | 40.0% | |
| TCTCGAATTGGTTGCCTTAT+TGG | + | 51522:11643-11662 | MS.gene046976:CDS | 40.0% | |
| TCTTATTCTGATGGCTATGG+AGG | + | 51522:12082-12101 | MS.gene046976:CDS | 40.0% | |
| TGAAGACGTTGATATGGAGA+AGG | + | 51522:8692-8711 | MS.gene046976:CDS | 40.0% | |
| TGAAGATGATGAAATGGTGC+AGG | + | 51522:11756-11775 | MS.gene046976:CDS | 40.0% | |
| TGAGTTTATGTGTCCTGCTA+TGG | + | 51522:8611-8630 | MS.gene046976:CDS | 40.0% | |
| TGCGCAGATTAGGATTCTTA+AGG | + | 51522:9884-9903 | MS.gene046976:CDS | 40.0% | |
| TGCTTACAATAGTGGCTGTA+GGG | + | 51522:9333-9352 | MS.gene046976:intron | 40.0% | |
| TGGAAACTATGGAAGTTCAC+AGG | + | 51522:12135-12154 | MS.gene046976:CDS | 40.0% | |
| TTGCTTACAATAGTGGCTGT+AGG | + | 51522:9332-9351 | MS.gene046976:intron | 40.0% | |
| TTTCAACTTTCTCACTGCAC+CGG | - | 51522:11576-11595 | MS.gene046976:intergenic | 40.0% | |
| ! | AAAAAGATTTGCTCTCAGCC+GGG | - | 51522:11936-11955 | MS.gene046976:intergenic | 40.0% |
| ! | CAAAAAGATTTGCTCTCAGC+CGG | - | 51522:11937-11956 | MS.gene046976:intergenic | 40.0% |
| ! | CTGGATTGACAACATTTTCC+TGG | + | 51522:10336-10355 | MS.gene046976:intron | 40.0% |
| ! | TGATGATGTTGACATGTCGA+AGG | + | 51522:8965-8984 | MS.gene046976:intron | 40.0% |
| ! | TGTGAAAAAGGCTCTGATTC+AGG | + | 51522:10992-11011 | MS.gene046976:CDS | 40.0% |
| ! | TTGTGATGAGCGTGTTGTTA+CGG | + | 51522:8545-8564 | MS.gene046976:CDS | 40.0% |
| !! | CATTGGAGGTGTTATAGGTA+AGG | + | 51522:11271-11290 | MS.gene046976:CDS | 40.0% |
| !! | GCTAACATTGGAGGTGTTAT+AGG | + | 51522:11266-11285 | MS.gene046976:CDS | 40.0% |
| !! | GTTGAACAAACCGCCATTTT+GGG | + | 51522:10568-10587 | MS.gene046976:intron | 40.0% |
| !! | TACGAAGTGTTGTCAAACAG+TGG | + | 51522:10517-10536 | MS.gene046976:intron | 40.0% |
| AATAGTGGCTGTAGGGTGTA+TGG | + | 51522:9340-9359 | MS.gene046976:intron | 45.0% | |
| ACAACTCCGTCTTGATACGA+AGG | + | 51522:8491-8510 | MS.gene046976:CDS | 45.0% | |
| ACACCTCCAATGTTAGCAGT+TGG | - | 51522:11263-11282 | MS.gene046976:intergenic | 45.0% | |
| ACGAAGGCGAAGATTCGAAT+CGG | + | 51522:8507-8526 | MS.gene046976:CDS | 45.0% | |
| ATCGGAGCCATTCCCATAAT+TGG | - | 51522:11128-11147 | MS.gene046976:intergenic | 45.0% | |
| ATGATGAAATGGTGCAGGTG+AGG | + | 51522:11761-11780 | MS.gene046976:intron | 45.0% | |
| ATGTTATCAGGTGGATGGAG+GGG | + | 51522:9764-9783 | MS.gene046976:intron | 45.0% | |
| ATTATGGGAATGGCTCCGAT+TGG | + | 51522:11128-11147 | MS.gene046976:CDS | 45.0% | |
| ATTGGGTGTGTGATTGGGAA+AGG | + | 51522:9825-9844 | MS.gene046976:CDS | 45.0% | |
| CGTTTACCGTTACCTTTGTC+CGG | + | 51522:8422-8441 | MS.gene046976:CDS | 45.0% | |
| CTCATCCGCACTTAAAATCC+TGG | - | 51522:12186-12205 | MS.gene046976:intergenic | 45.0% | |
| CTCTTGTGCAAGTACTTACC+CGG | + | 51522:11915-11934 | MS.gene046976:CDS | 45.0% | |
| GATCAGATTGGGTGTGTGAT+TGG | + | 51522:9819-9838 | MS.gene046976:CDS | 45.0% | |
| GATCCTCCTTAGATAGGATG+CGG | - | 51522:11720-11739 | MS.gene046976:intergenic | 45.0% | |
| GATGAGGATGATGTGTGATG+AGG | + | 51522:8941-8960 | MS.gene046976:intron | 45.0% | |
| GCAGGAAGATATGCAAGTAC+TGG | - | 51522:11992-12011 | MS.gene046976:intergenic | 45.0% | |
| GCTGGTCAAAGAACATCCTA+CGG | + | 51522:8279-8298 | MS.gene046976:CDS | 45.0% | |
| GCTTGTCAGGATTCATCAGA+AGG | + | 51522:8638-8657 | MS.gene046976:CDS | 45.0% | |
| GTCAATCTCACCCAAAATGG+CGG | - | 51522:10581-10600 | MS.gene046976:intergenic | 45.0% | |
| GTCTCTTGGAGTAGTTTCGT+CGG | - | 51522:8376-8395 | MS.gene046976:intergenic | 45.0% | |
| GTGATGTTGGAGACTATCCA+CGG | + | 51522:11174-11193 | MS.gene046976:CDS | 45.0% | |
| TAGGGAGATCCTCCTTAGAT+AGG | - | 51522:11726-11745 | MS.gene046976:intergenic | 45.0% | |
| TCAGAGTTCAAAGCGCAAAG+CGG | - | 51522:9921-9940 | MS.gene046976:intergenic | 45.0% | |
| TCATCAGAAGGTGATTGCTG+AGG | + | 51522:8650-8669 | MS.gene046976:CDS | 45.0% | |
| TCTGCTGTCTGTGTCTGTAA+CGG | + | 51522:9503-9522 | MS.gene046976:intron | 45.0% | |
| TCTTCGCCTTCGTATCAAGA+CGG | - | 51522:8500-8519 | MS.gene046976:intergenic | 45.0% | |
| TGATGTTGACATGTCGAAGG+TGG | + | 51522:8968-8987 | MS.gene046976:intron | 45.0% | |
| TGCTTACTTCTGCAGTTCCT+GGG | + | 51522:11057-11076 | MS.gene046976:CDS | 45.0% | |
| TGTCCAACTGCTAACATTGG+AGG | + | 51522:11257-11276 | MS.gene046976:CDS | 45.0% | |
| TTCAACTTTCTCACTGCACC+GGG | - | 51522:11575-11594 | MS.gene046976:intergenic | 45.0% | |
| TTGAAACCATCTGGTCCTTC+TGG | - | 51522:12019-12038 | MS.gene046976:intergenic | 45.0% | |
| TTGCTTACTTCTGCAGTTCC+TGG | + | 51522:11056-11075 | MS.gene046976:CDS | 45.0% | |
| TTGCTTATAATAGTGGCCGG+AGG | - | 51522:9541-9560 | MS.gene046976:intergenic | 45.0% | |
| TTGTCAAATGGCGGCTATTG+CGG | + | 51522:10259-10278 | MS.gene046976:intron | 45.0% | |
| TTGTGGCGTCTGATCAGATT+GGG | + | 51522:9808-9827 | MS.gene046976:CDS | 45.0% | |
| TTGTTTCATATGCGGCAGCT+TGG | + | 51522:12250-12269 | MS.gene046976:intron | 45.0% | |
| ! | AGTGATTTTGCATCTGGCGA+CGG | + | 51522:12109-12128 | MS.gene046976:CDS | 45.0% |
| ! | CGGACAAAGGTAACGGTAAA+CGG | - | 51522:8424-8443 | MS.gene046976:intergenic | 45.0% |
| ! | CTTTGTCCGGTTCGCAAAAT+CGG | + | 51522:8435-8454 | MS.gene046976:CDS | 45.0% |
| ! | GGCTCAAGTGATTTTGCATC+TGG | + | 51522:12103-12122 | MS.gene046976:CDS | 45.0% |
| ! | GGTTGAACAAACCGCCATTT+TGG | + | 51522:10567-10586 | MS.gene046976:intron | 45.0% |
| ! | GGTTGCCTTATTGGTAAAGG+AGG | + | 51522:11652-11671 | MS.gene046976:CDS | 45.0% |
| !! | AAAGGCTCTGATTCAGGTTG+CGG | + | 51522:10998-11017 | MS.gene046976:CDS | 45.0% |
| !! | GAGTAGTTTCGTCGGTGTTA+GGG | - | 51522:8368-8387 | MS.gene046976:intergenic | 45.0% |
| !! | GGAAGATATGCAAGTACTGG+TGG | - | 51522:11989-12008 | MS.gene046976:intergenic | 45.0% |
| !! | GGATTCTGGGGCAAATATCA+AGG | + | 51522:11322-11341 | MS.gene046976:CDS | 45.0% |
| !! | GTTGATAGTTCGGCAACTGA+AGG | + | 51522:11344-11363 | MS.gene046976:CDS | 45.0% |
| !! | TTTCGTCGGTGTTAGGGTTA+CGG | - | 51522:8362-8381 | MS.gene046976:intergenic | 45.0% |
| !! | TTTGAACGGATTGTCCCATG+TGG | + | 51522:10483-10502 | MS.gene046976:intron | 45.0% |
| !!! | AACTGCCATTTTCCGTGATC+TGG | + | 51522:10317-10336 | MS.gene046976:intron | 45.0% |
| AAGGGATGAAGGTTCTCCGA+TGG | + | 51522:11214-11233 | MS.gene046976:CDS | 50.0% | |
| AATAGCCATTTCGGCGAGAG+AGG | + | 51522:11379-11398 | MS.gene046976:CDS | 50.0% | |
| ACAACACGCTCATCACAACC+AGG | - | 51522:8543-8562 | MS.gene046976:intergenic | 50.0% | |
| ACGGTGATTCGTACACCCTA+TGG | + | 51522:9271-9290 | MS.gene046976:intron | 50.0% | |
| ACGGTGGTTCATACATCCTC+CGG | + | 51522:9522-9541 | MS.gene046976:intron | 50.0% | |
| AGAACCCACCATTGAACCAC+CGG | - | 51522:11093-11112 | MS.gene046976:intergenic | 50.0% | |
| ATTGCTGAGGATTTGCGTGG+TGG | + | 51522:8663-8682 | MS.gene046976:CDS | 50.0% | |
| CATCCGCATCCTATCTAAGG+AGG | + | 51522:11714-11733 | MS.gene046976:CDS | 50.0% | |
| CCACGACACAGACACAAACA+CGG | - | 51522:8794-8813 | MS.gene046976:intergenic | 50.0% | |
| CGAATCGGTGAAACTGTTCC+TGG | + | 51522:8522-8541 | MS.gene046976:CDS | 50.0% | |
| CGCAAAATCGGCAGCATCAT+TGG | + | 51522:8447-8466 | MS.gene046976:CDS | 50.0% | |
| CGTGTTTGTGTCTGTGTCGT+GGG | + | 51522:8792-8811 | MS.gene046976:intron | 50.0% | |
| CTATCCACGGTCCATGTATC+CGG | + | 51522:11187-11206 | MS.gene046976:CDS | 50.0% | |
| CTCAGTGTATGGGTCGTGTT+TGG | + | 51522:8765-8784 | MS.gene046976:intron | 50.0% | |
| CTCTTTCACTAGCCGGTTAC+TGG | + | 51522:11612-11631 | MS.gene046976:CDS | 50.0% | |
| CTTGTGGCGTCTGATCAGAT+TGG | + | 51522:9807-9826 | MS.gene046976:CDS | 50.0% | |
| GAGAGCTTGACACCAGTAAC+CGG | - | 51522:11627-11646 | MS.gene046976:intergenic | 50.0% | |
| GCTTACTTCTGCAGTTCCTG+GGG | + | 51522:11058-11077 | MS.gene046976:CDS | 50.0% | |
| GCTTGACAACACTAAGCTCC+AGG | - | 51522:10421-10440 | MS.gene046976:intergenic | 50.0% | |
| GGCGACGGTTATGGAAACTA+TGG | + | 51522:12124-12143 | MS.gene046976:CDS | 50.0% | |
| GGGGGAACTAGATATTGCCA+AGG | + | 51522:11889-11908 | MS.gene046976:CDS | 50.0% | |
| GGTAGAGATGGAAGACGACA+TGG | + | 51522:12046-12065 | MS.gene046976:CDS | 50.0% | |
| GGTGGTCCTTATGGAGCTTA+TGG | + | 51522:12277-12296 | MS.gene046976:CDS | 50.0% | |
| GGTGTGTGATTGGGAAAGGT+GGG | + | 51522:9829-9848 | MS.gene046976:CDS | 50.0% | |
| GGTTACGGCGAAATTGCTTG+TGG | + | 51522:9791-9810 | MS.gene046976:CDS | 50.0% | |
| GTGATTGCTGAGGATTTGCG+TGG | + | 51522:8660-8679 | MS.gene046976:CDS | 50.0% | |
| TATCCACGGTCCATGTATCC+GGG | + | 51522:11188-11207 | MS.gene046976:CDS | 50.0% | |
| TATCTTCCTGCTTCGCCAGA+AGG | + | 51522:12001-12020 | MS.gene046976:CDS | 50.0% | |
| TCAACTTTCTCACTGCACCG+GGG | - | 51522:11574-11593 | MS.gene046976:intergenic | 50.0% | |
| TCGCTGAATCTGCAGATCTC+TGG | + | 51522:10957-10976 | MS.gene046976:intron | 50.0% | |
| TGCGAACCGGACAAAGGTAA+CGG | - | 51522:8431-8450 | MS.gene046976:intergenic | 50.0% | |
| TGGGGCTCCAATTATGGGAA+TGG | + | 51522:11118-11137 | MS.gene046976:CDS | 50.0% | |
| TTCTACCTCTCTCGCCGAAA+TGG | - | 51522:11387-11406 | MS.gene046976:intergenic | 50.0% | |
| TTTGCATCTGGCGACGGTTA+TGG | + | 51522:12115-12134 | MS.gene046976:CDS | 50.0% | |
| ! | ATCAGTGCTGCTGACGTGTT+CGG | + | 51522:9064-9083 | MS.gene046976:intron | 50.0% |
| ! | CATGGTGGGGCTCCAATTAT+GGG | + | 51522:11113-11132 | MS.gene046976:CDS | 50.0% |
| ! | CGATTTTGCGAACCGGACAA+AGG | - | 51522:8437-8456 | MS.gene046976:intergenic | 50.0% |
| ! | CTGGTGTCAAGCTCTCGAAT+TGG | + | 51522:11631-11650 | MS.gene046976:CDS | 50.0% |
| ! | GAACTCTGACGAGCTTGTTC+AGG | + | 51522:9932-9951 | MS.gene046976:CDS | 50.0% |
| ! | GGAGTAGTTTCGTCGGTGTT+AGG | - | 51522:8369-8388 | MS.gene046976:intergenic | 50.0% |
| ! | GGATGGAGGGGATTTGGTTA+CGG | + | 51522:9776-9795 | MS.gene046976:CDS | 50.0% |
| ! | GGGGGGTATAAAGGTGATGT+TGG | + | 51522:11161-11180 | MS.gene046976:CDS | 50.0% |
| ! | GGTGGTTATGGGGGGTATAA+AGG | + | 51522:11152-11171 | MS.gene046976:CDS | 50.0% |
| ! | GTGTGAACGTTTGTTGCCGT+AGG | - | 51522:8298-8317 | MS.gene046976:intergenic | 50.0% |
| ! | TCATGGTGGGGCTCCAATTA+TGG | + | 51522:11112-11131 | MS.gene046976:CDS | 50.0% |
| !! | AACGGTAAACGGTGTCGTCT+TGG | - | 51522:8413-8432 | MS.gene046976:intergenic | 50.0% |
| !! | AATGGTGGGTTCTCATGGTG+GGG | + | 51522:11100-11119 | MS.gene046976:CDS | 50.0% |
| !! | ACGGAACGGACTAGTACTTC+TGG | + | 51522:12310-12329 | MS.gene046976:CDS | 50.0% |
| !! | ACGGTAAACGGTGTCGTCTT+GGG | - | 51522:8412-8431 | MS.gene046976:intergenic | 50.0% |
| !! | AGGGTTACGGCGTTTGTTGT+TGG | - | 51522:8349-8368 | MS.gene046976:intergenic | 50.0% |
| !! | CAATGGTGGGTTCTCATGGT+GGG | + | 51522:11099-11118 | MS.gene046976:CDS | 50.0% |
| !! | CTCCGATTGGTGGTGGTTAT+GGG | + | 51522:11141-11160 | MS.gene046976:CDS | 50.0% |
| !! | GAACGGACTAGTACTTCTGG+AGG | + | 51522:12313-12332 | MS.gene046976:CDS | 50.0% |
| !! | GGAGGTGTTATAGGTAAGGG+CGG | + | 51522:11275-11294 | MS.gene046976:CDS | 50.0% |
| !! | GGTTCAATGGTGGGTTCTCA+TGG | + | 51522:11095-11114 | MS.gene046976:CDS | 50.0% |
| !! | TACTTGCACAAGAGCGTCCT+TGG | - | 51522:11909-11928 | MS.gene046976:intergenic | 50.0% |
| !! | TCAATGGTGGGTTCTCATGG+TGG | + | 51522:11098-11117 | MS.gene046976:CDS | 50.0% |
| !! | TCCGATTGGTGGTGGTTATG+GGG | + | 51522:11142-11161 | MS.gene046976:CDS | 50.0% |
| !! | TCTGGTGTCGGTGTTTGTGA+CGG | + | 51522:9252-9271 | MS.gene046976:intron | 50.0% |
| !!! | ATGCTGCCGATTTTGCGAAC+CGG | - | 51522:8444-8463 | MS.gene046976:intergenic | 50.0% |
| ATCCCTTGAGCCCGGATACA+TGG | - | 51522:11201-11220 | MS.gene046976:intergenic | 55.0% | |
| ATGGGAATGGCTCCGATTGG+TGG | + | 51522:11131-11150 | MS.gene046976:CDS | 55.0% | |
| CCCCCATAACCACCACCAAT+CGG | - | 51522:11146-11165 | MS.gene046976:intergenic | 55.0% | |
| CCGTGTTTGTGTCTGTGTCG+TGG | + | 51522:8791-8810 | MS.gene046976:intron | 55.0% | |
| CTGACAAGCGCATCCATAGC+AGG | - | 51522:8627-8646 | MS.gene046976:intergenic | 55.0% | |
| CTGCTATGGATGCGCTTGTC+AGG | + | 51522:8625-8644 | MS.gene046976:CDS | 55.0% | |
| GAACCTTCATCCCTTGAGCC+CGG | - | 51522:11209-11228 | MS.gene046976:intergenic | 55.0% | |
| GATGGAAGACGACATGGACG+TGG | + | 51522:12052-12071 | MS.gene046976:CDS | 55.0% | |
| GCTGTCTGTGTCTGTAACGG+TGG | + | 51522:9506-9525 | MS.gene046976:intron | 55.0% | |
| GGGTGTGTGATTGGGAAAGG+TGG | + | 51522:9828-9847 | MS.gene046976:CDS | 55.0% | |
| GTCCATGTATCCGGGCTCAA+GGG | + | 51522:11196-11215 | MS.gene046976:CDS | 55.0% | |
| GTGAGACTGGTGCGCAGATT+AGG | + | 51522:9874-9893 | MS.gene046976:CDS | 55.0% | |
| TATCCGGGCTCAAGGGATGA+AGG | + | 51522:11203-11222 | MS.gene046976:CDS | 55.0% | |
| TCAGGTGGATGGAGGGGATT+TGG | + | 51522:9770-9789 | MS.gene046976:intron | 55.0% | |
| TGCAGTTCCTGGGGTGTATG+CGG | + | 51522:11067-11086 | MS.gene046976:CDS | 55.0% | |
| ! | CAGCTGTGCTTTTGCAACCC+CGG | + | 51522:11554-11573 | MS.gene046976:CDS | 55.0% |
| ! | GGTGTTATAGGTAAGGGCGG+TGG | + | 51522:11278-11297 | MS.gene046976:CDS | 55.0% |
| !! | CCGATTGGTGGTGGTTATGG+GGG | + | 51522:11143-11162 | MS.gene046976:CDS | 55.0% |
| !! | CGATTGGTGGTGGTTATGGG+GGG | + | 51522:11144-11163 | MS.gene046976:CDS | 55.0% |
| !! | CTCTGATTCAGGTTGCGGCA+CGG | + | 51522:11003-11022 | MS.gene046976:CDS | 55.0% |
| !! | GCTCCGATTGGTGGTGGTTA+TGG | + | 51522:11140-11159 | MS.gene046976:CDS | 55.0% |
| ATCGGCAGCATCATTGGCCG+CGG | + | 51522:8453-8472 | MS.gene046976:CDS | 60.0% | |
| GCTTCGCCAGAAGGACCAGA+TGG | + | 51522:12010-12029 | MS.gene046976:CDS | 60.0% | |
| GGAAGACGACATGGACGTGG+TGG | + | 51522:12055-12074 | MS.gene046976:CDS | 60.0% | |
| GGAATGGCTCCGATTGGTGG+TGG | + | 51522:11134-11153 | MS.gene046976:CDS | 60.0% | |
| GGTCCATGTATCCGGGCTCA+AGG | + | 51522:11195-11214 | MS.gene046976:CDS | 60.0% | |
| GTATGCGGCCGGTGGTTCAA+TGG | + | 51522:11082-11101 | MS.gene046976:CDS | 60.0% | |
| TCAAAGCGCAAAGCGGCAGC+CGG | - | 51522:9914-9933 | MS.gene046976:intergenic | 60.0% | |
| TCTGGTCCTTCTGGCGAAGC+AGG | - | 51522:12010-12029 | MS.gene046976:intergenic | 60.0% | |
| TCTGTGTCGTGGGTCGTGCT+CGG | + | 51522:8802-8821 | MS.gene046976:intron | 60.0% | |
| GAGCCCGGATACATGGACCG+TGG | - | 51522:11194-11213 | MS.gene046976:intergenic | 65.0% | |
| GCGGCCGGTGGTTCAATGGT+GGG | + | 51522:11086-11105 | MS.gene046976:CDS | 65.0% | |
| GTTCCTGGGGTGTATGCGGC+CGG | + | 51522:11071-11090 | MS.gene046976:CDS | 65.0% | |
| GTTTCACGATCTCGCCGCCG+CGG | - | 51522:8473-8492 | MS.gene046976:intergenic | 65.0% | |
| TGCGGCCGGTGGTTCAATGG+TGG | + | 51522:11085-11104 | MS.gene046976:CDS | 65.0% | |
| GGCAGCATCATTGGCCGCGG+CGG | + | 51522:8456-8475 | MS.gene046976:CDS | 70.0% | |
| CCACCGGCCGCATACACCCC+AGG | - | 51522:11077-11096 | MS.gene046976:intergenic | 75.0% | |
| CCTGGGGTGTATGCGGCCGG+TGG | + | 51522:11074-11093 | MS.gene046976:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51522 | gene | 8276 | 12332 | 8276 | ID=MS.gene046976 |
| 51522 | mRNA | 8276 | 12332 | 8276 | ID=MS.gene046976.t1;Parent=MS.gene046976 |
| 51522 | exon | 8276 | 8713 | 8276 | ID=MS.gene046976.t1.exon1;Parent=MS.gene046976.t1 |
| 51522 | CDS | 8276 | 8713 | 8276 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| 51522 | exon | 9774 | 9953 | 9774 | ID=MS.gene046976.t1.exon2;Parent=MS.gene046976.t1 |
| 51522 | CDS | 9774 | 9953 | 9774 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| 51522 | exon | 10972 | 11400 | 10972 | ID=MS.gene046976.t1.exon3;Parent=MS.gene046976.t1 |
| 51522 | CDS | 10972 | 11400 | 10972 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| 51522 | exon | 11520 | 11777 | 11520 | ID=MS.gene046976.t1.exon4;Parent=MS.gene046976.t1 |
| 51522 | CDS | 11520 | 11777 | 11520 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| 51522 | exon | 11884 | 12156 | 11884 | ID=MS.gene046976.t1.exon5;Parent=MS.gene046976.t1 |
| 51522 | CDS | 11884 | 12156 | 11884 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| 51522 | exon | 12268 | 12332 | 12268 | ID=MS.gene046976.t1.exon6;Parent=MS.gene046976.t1 |
| 51522 | CDS | 12268 | 12332 | 12268 | ID=cds.MS.gene046976.t1;Parent=MS.gene046976.t1 |
| Gene Sequence |
| Protein sequence |
