Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048701.t1 | XP_003600716.2 | 95.9 | 491 | 20 | 0 | 1 | 491 | 1 | 491 | 3.70E-270 | 940.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048701.t1 | Q9C7U5 | 67.3 | 477 | 149 | 2 | 18 | 488 | 26 | 501 | 1.6e-189 | 663.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048701.t1 | G7J9D2 | 95.9 | 491 | 20 | 0 | 1 | 491 | 1 | 491 | 2.7e-270 | 940.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene048701 | MS.gene049885 | PPI |
MS.gene048701 | MS.gene045397 | PPI |
MS.gene048701 | MS.gene08924 | PPI |
MS.gene048701 | MS.gene08923 | PPI |
MS.gene048701 | MS.gene08772 | PPI |
MS.gene79856 | MS.gene048701 | PPI |
MS.gene048701 | MS.gene77492 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048701.t1 | MTR_3g065460 | 95.927 | 491 | 20 | 0 | 1 | 491 | 1 | 491 | 0.0 | 971 |
MS.gene048701.t1 | MTR_5g078200 | 76.939 | 490 | 105 | 3 | 1 | 483 | 1 | 489 | 0.0 | 792 |
MS.gene048701.t1 | MTR_5g078200 | 77.193 | 456 | 97 | 2 | 35 | 483 | 1 | 456 | 0.0 | 746 |
MS.gene048701.t1 | MTR_1g031900 | 68.000 | 450 | 144 | 0 | 1 | 450 | 1 | 450 | 0.0 | 657 |
MS.gene048701.t1 | MTR_1g031900 | 68.009 | 447 | 143 | 0 | 1 | 447 | 1 | 447 | 0.0 | 653 |
MS.gene048701.t1 | MTR_4g132280 | 54.008 | 474 | 213 | 2 | 19 | 490 | 40 | 510 | 0.0 | 525 |
MS.gene048701.t1 | MTR_8g085720 | 50.511 | 489 | 232 | 3 | 8 | 486 | 10 | 498 | 2.60e-170 | 489 |
MS.gene048701.t1 | MTR_3g083580 | 50.224 | 446 | 219 | 2 | 8 | 452 | 10 | 453 | 6.23e-168 | 483 |
MS.gene048701.t1 | MTR_6g088885 | 41.667 | 432 | 240 | 4 | 23 | 445 | 26 | 454 | 1.39e-119 | 360 |
MS.gene048701.t1 | MTR_5g085580 | 41.031 | 446 | 237 | 3 | 24 | 446 | 25 | 467 | 2.07e-116 | 351 |
MS.gene048701.t1 | MTR_1g056640 | 39.479 | 461 | 242 | 3 | 20 | 446 | 34 | 491 | 2.38e-111 | 338 |
MS.gene048701.t1 | MTR_8g102340 | 40.879 | 455 | 222 | 6 | 1 | 445 | 1 | 418 | 2.37e-110 | 335 |
MS.gene048701.t1 | MTR_4g069940 | 36.484 | 455 | 273 | 4 | 5 | 446 | 9 | 460 | 6.41e-99 | 306 |
MS.gene048701.t1 | MTR_8g012400 | 36.819 | 459 | 272 | 8 | 1 | 446 | 6 | 459 | 1.67e-97 | 302 |
MS.gene048701.t1 | MTR_4g088155 | 36.761 | 457 | 266 | 8 | 7 | 446 | 8 | 458 | 8.96e-97 | 300 |
MS.gene048701.t1 | MTR_3g116510 | 36.203 | 453 | 275 | 5 | 5 | 447 | 8 | 456 | 6.34e-94 | 293 |
MS.gene048701.t1 | MTR_7g053500 | 36.009 | 436 | 262 | 6 | 25 | 446 | 27 | 459 | 2.10e-93 | 291 |
MS.gene048701.t1 | MTR_1g022160 | 35.000 | 460 | 262 | 6 | 21 | 447 | 21 | 476 | 9.95e-89 | 280 |
MS.gene048701.t1 | MTR_1g022160 | 34.934 | 458 | 261 | 6 | 21 | 445 | 21 | 474 | 7.33e-87 | 275 |
MS.gene048701.t1 | MTR_4g083500 | 36.089 | 496 | 280 | 13 | 24 | 490 | 44 | 531 | 4.39e-85 | 272 |
MS.gene048701.t1 | MTR_3g080410 | 42.813 | 327 | 183 | 2 | 24 | 349 | 26 | 349 | 6.64e-85 | 266 |
MS.gene048701.t1 | MTR_1g022160 | 34.590 | 451 | 258 | 6 | 21 | 438 | 21 | 467 | 2.81e-84 | 268 |
MS.gene048701.t1 | MTR_7g026340 | 36.281 | 441 | 243 | 11 | 24 | 443 | 23 | 446 | 5.79e-84 | 266 |
MS.gene048701.t1 | MTR_7g053500 | 36.979 | 384 | 225 | 6 | 77 | 446 | 2 | 382 | 1.60e-82 | 261 |
MS.gene048701.t1 | MTR_8g012400 | 36.745 | 381 | 227 | 6 | 77 | 446 | 2 | 379 | 1.87e-80 | 255 |
MS.gene048701.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 5.48e-75 | 241 |
MS.gene048701.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 5.78e-75 | 240 |
MS.gene048701.t1 | MTR_4g010200 | 38.841 | 345 | 204 | 3 | 7 | 347 | 13 | 354 | 6.03e-75 | 241 |
MS.gene048701.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 1.64e-74 | 240 |
MS.gene048701.t1 | MTR_4g052970 | 38.226 | 327 | 193 | 4 | 24 | 347 | 29 | 349 | 1.06e-71 | 233 |
MS.gene048701.t1 | MTR_1g077990 | 38.272 | 324 | 194 | 4 | 24 | 346 | 31 | 349 | 6.70e-69 | 226 |
MS.gene048701.t1 | MTR_4g084480 | 35.549 | 346 | 218 | 3 | 2 | 346 | 3 | 344 | 4.91e-68 | 223 |
MS.gene048701.t1 | MTR_4g084480 | 36.228 | 334 | 208 | 3 | 2 | 334 | 10 | 339 | 5.93e-68 | 223 |
MS.gene048701.t1 | MTR_4g084480 | 36.228 | 334 | 208 | 3 | 2 | 334 | 10 | 339 | 8.08e-68 | 223 |
MS.gene048701.t1 | MTR_1g022160 | 38.390 | 323 | 194 | 3 | 21 | 341 | 21 | 340 | 8.54e-68 | 223 |
MS.gene048701.t1 | MTR_1g007810 | 39.564 | 321 | 183 | 6 | 24 | 341 | 16 | 328 | 7.47e-67 | 219 |
MS.gene048701.t1 | MTR_2g086530 | 38.080 | 323 | 193 | 3 | 24 | 345 | 8 | 324 | 1.01e-65 | 216 |
MS.gene048701.t1 | MTR_2g086530 | 38.080 | 323 | 193 | 3 | 24 | 345 | 29 | 345 | 1.60e-65 | 216 |
MS.gene048701.t1 | MTR_4g076490 | 37.117 | 326 | 186 | 6 | 24 | 347 | 97 | 405 | 7.82e-65 | 216 |
MS.gene048701.t1 | MTR_4g076255 | 38.199 | 322 | 183 | 6 | 24 | 345 | 25 | 330 | 3.71e-64 | 211 |
MS.gene048701.t1 | MTR_4g076500 | 36.391 | 327 | 196 | 3 | 20 | 345 | 74 | 389 | 4.18e-64 | 213 |
MS.gene048701.t1 | MTR_2g019345 | 35.503 | 338 | 204 | 4 | 1 | 333 | 1 | 329 | 4.32e-64 | 213 |
MS.gene048701.t1 | MTR_3g116510 | 35.802 | 324 | 196 | 3 | 132 | 447 | 3 | 322 | 5.43e-63 | 208 |
MS.gene048701.t1 | MTR_4g076470 | 37.463 | 339 | 185 | 9 | 1 | 334 | 1 | 317 | 5.77e-63 | 208 |
MS.gene048701.t1 | MTR_4g076440 | 35.777 | 341 | 202 | 7 | 1 | 341 | 1 | 324 | 4.86e-62 | 206 |
MS.gene048701.t1 | MTR_1g053320 | 31.808 | 459 | 284 | 15 | 5 | 446 | 11 | 457 | 2.00e-61 | 209 |
MS.gene048701.t1 | MTR_4g076430 | 35.159 | 347 | 204 | 8 | 1 | 345 | 1 | 328 | 1.11e-59 | 199 |
MS.gene048701.t1 | MTR_7g081350 | 36.137 | 321 | 192 | 7 | 24 | 343 | 27 | 335 | 8.66e-59 | 197 |
MS.gene048701.t1 | MTR_4g076570 | 36.452 | 310 | 188 | 3 | 24 | 333 | 22 | 322 | 2.10e-58 | 197 |
MS.gene048701.t1 | MTR_1g010120 | 31.602 | 462 | 276 | 17 | 3 | 445 | 8 | 448 | 2.70e-58 | 200 |
MS.gene048701.t1 | MTR_4g112025 | 30.736 | 462 | 288 | 17 | 4 | 446 | 9 | 457 | 7.27e-58 | 200 |
MS.gene048701.t1 | MTR_2g027560 | 32.420 | 438 | 271 | 13 | 21 | 445 | 25 | 450 | 8.71e-58 | 199 |
MS.gene048701.t1 | MTR_1g052430 | 37.097 | 310 | 186 | 4 | 24 | 333 | 32 | 332 | 3.25e-57 | 195 |
MS.gene048701.t1 | MTR_2g034470 | 37.615 | 327 | 191 | 7 | 24 | 348 | 30 | 345 | 1.01e-55 | 190 |
MS.gene048701.t1 | MTR_2g034440 | 37.778 | 315 | 183 | 7 | 24 | 336 | 22 | 325 | 3.81e-55 | 187 |
MS.gene048701.t1 | MTR_2g034470 | 37.421 | 318 | 186 | 7 | 33 | 348 | 4 | 310 | 6.41e-55 | 187 |
MS.gene048701.t1 | MTR_8g092070 | 30.385 | 441 | 277 | 16 | 22 | 446 | 32 | 458 | 6.89e-55 | 193 |
MS.gene048701.t1 | MTR_3g031770 | 31.403 | 449 | 267 | 14 | 24 | 453 | 27 | 453 | 2.51e-54 | 190 |
MS.gene048701.t1 | MTR_2g034480 | 34.582 | 347 | 211 | 9 | 5 | 348 | 9 | 342 | 5.38e-54 | 186 |
MS.gene048701.t1 | MTR_4g124440 | 30.303 | 462 | 281 | 21 | 5 | 445 | 10 | 451 | 1.31e-52 | 185 |
MS.gene048701.t1 | MTR_7g085390 | 30.023 | 443 | 271 | 16 | 24 | 445 | 26 | 450 | 2.83e-52 | 184 |
MS.gene048701.t1 | MTR_3g108600 | 31.293 | 441 | 248 | 17 | 24 | 445 | 31 | 435 | 5.54e-52 | 183 |
MS.gene048701.t1 | MTR_3g095050 | 29.336 | 467 | 296 | 17 | 7 | 454 | 13 | 464 | 8.58e-52 | 183 |
MS.gene048701.t1 | MTR_6g032820 | 29.953 | 424 | 263 | 17 | 24 | 427 | 26 | 435 | 3.95e-47 | 169 |
MS.gene048701.t1 | MTR_7g081370 | 31.953 | 338 | 202 | 9 | 7 | 343 | 13 | 323 | 3.23e-46 | 164 |
MS.gene048701.t1 | MTR_5g081720 | 33.882 | 304 | 191 | 7 | 40 | 341 | 53 | 348 | 1.83e-41 | 152 |
MS.gene048701.t1 | MTR_4g134280 | 29.630 | 324 | 198 | 13 | 136 | 445 | 29 | 336 | 1.75e-32 | 127 |
MS.gene048701.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 34 | 152 | 2.71e-26 | 104 |
MS.gene048701.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 54 | 172 | 6.25e-26 | 104 |
MS.gene048701.t1 | MTR_4g079530 | 39.437 | 142 | 74 | 3 | 357 | 488 | 33 | 172 | 1.25e-25 | 103 |
MS.gene048701.t1 | MTR_4g079530 | 45.745 | 94 | 51 | 0 | 357 | 450 | 33 | 126 | 8.95e-24 | 96.7 |
MS.gene048701.t1 | MTR_8g085390 | 37.815 | 119 | 71 | 2 | 339 | 455 | 6 | 123 | 2.36e-20 | 89.0 |
MS.gene048701.t1 | MTR_4g083070 | 42.202 | 109 | 53 | 3 | 343 | 450 | 11 | 110 | 3.07e-20 | 89.0 |
MS.gene048701.t1 | MTR_8g085440 | 38.889 | 90 | 54 | 1 | 357 | 446 | 28 | 116 | 5.46e-20 | 85.9 |
MS.gene048701.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 2.34e-19 | 88.2 |
MS.gene048701.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 3.57e-19 | 88.6 |
MS.gene048701.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 3.90e-19 | 88.6 |
MS.gene048701.t1 | MTR_4g109490 | 48.235 | 85 | 42 | 2 | 361 | 445 | 24 | 106 | 8.98e-19 | 85.5 |
MS.gene048701.t1 | MTR_5g097420 | 42.353 | 85 | 49 | 0 | 359 | 443 | 28 | 112 | 1.74e-18 | 81.6 |
MS.gene048701.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.24e-17 | 81.6 |
MS.gene048701.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.41e-17 | 83.2 |
MS.gene048701.t1 | MTR_5g044530 | 40.404 | 99 | 56 | 2 | 352 | 448 | 13 | 110 | 1.50e-17 | 82.8 |
MS.gene048701.t1 | MTR_4g133735 | 48.837 | 86 | 42 | 2 | 361 | 445 | 28 | 112 | 1.86e-17 | 78.6 |
MS.gene048701.t1 | MTR_8g085420 | 37.647 | 85 | 52 | 1 | 357 | 441 | 28 | 111 | 2.80e-17 | 79.0 |
MS.gene048701.t1 | MTR_4g133730 | 42.353 | 85 | 49 | 0 | 361 | 445 | 28 | 112 | 7.20e-17 | 77.0 |
MS.gene048701.t1 | MTR_2g049670 | 45.263 | 95 | 50 | 2 | 361 | 455 | 158 | 250 | 2.18e-16 | 80.5 |
MS.gene048701.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 353 | 441 | 412 | 498 | 4.29e-16 | 81.3 |
MS.gene048701.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 353 | 441 | 412 | 498 | 5.24e-16 | 81.3 |
MS.gene048701.t1 | MTR_3g048280 | 38.889 | 90 | 54 | 1 | 356 | 445 | 107 | 195 | 1.75e-15 | 75.5 |
MS.gene048701.t1 | MTR_5g015720 | 42.529 | 87 | 47 | 2 | 361 | 445 | 329 | 414 | 2.60e-14 | 75.1 |
MS.gene048701.t1 | MTR_2g072500 | 36.782 | 87 | 53 | 1 | 359 | 445 | 6 | 90 | 1.12e-13 | 67.0 |
MS.gene048701.t1 | MTR_4g036775 | 27.473 | 182 | 120 | 5 | 202 | 381 | 41 | 212 | 3.32e-13 | 69.3 |
MS.gene048701.t1 | MTR_4g036680 | 27.473 | 182 | 120 | 5 | 202 | 381 | 41 | 212 | 1.48e-12 | 67.4 |
MS.gene048701.t1 | MTR_1g116870 | 36.471 | 85 | 53 | 1 | 361 | 445 | 276 | 359 | 1.75e-12 | 69.3 |
MS.gene048701.t1 | MTR_8g085400 | 39.506 | 81 | 45 | 2 | 359 | 439 | 31 | 107 | 2.55e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048701.t1 | AT1G66250 | 67.296 | 477 | 149 | 2 | 18 | 488 | 26 | 501 | 0.0 | 681 |
MS.gene048701.t1 | AT2G01630 | 66.593 | 455 | 142 | 3 | 20 | 465 | 19 | 472 | 0.0 | 648 |
MS.gene048701.t1 | AT2G01630 | 68.333 | 420 | 133 | 0 | 20 | 439 | 19 | 438 | 0.0 | 631 |
MS.gene048701.t1 | AT2G01630 | 69.086 | 372 | 115 | 0 | 20 | 391 | 19 | 390 | 0.0 | 556 |
MS.gene048701.t1 | AT1G11820 | 56.322 | 435 | 190 | 0 | 19 | 453 | 39 | 473 | 0.0 | 538 |
MS.gene048701.t1 | AT1G11820 | 55.819 | 421 | 186 | 0 | 19 | 439 | 39 | 459 | 1.03e-180 | 515 |
MS.gene048701.t1 | AT3G13560 | 51.835 | 436 | 209 | 1 | 14 | 449 | 16 | 450 | 1.66e-158 | 459 |
MS.gene048701.t1 | AT3G13560 | 51.835 | 436 | 209 | 1 | 14 | 449 | 16 | 450 | 1.66e-158 | 459 |
MS.gene048701.t1 | AT3G13560 | 51.835 | 436 | 209 | 1 | 14 | 449 | 16 | 450 | 1.66e-158 | 459 |
MS.gene048701.t1 | AT3G13560 | 51.835 | 436 | 209 | 1 | 14 | 449 | 16 | 450 | 1.66e-158 | 459 |
MS.gene048701.t1 | AT3G13560 | 51.835 | 436 | 209 | 1 | 14 | 449 | 16 | 450 | 1.66e-158 | 459 |
MS.gene048701.t1 | AT1G11820 | 56.495 | 331 | 144 | 0 | 19 | 349 | 39 | 369 | 1.72e-136 | 399 |
MS.gene048701.t1 | AT2G05790 | 41.518 | 448 | 234 | 3 | 24 | 446 | 25 | 469 | 4.84e-121 | 363 |
MS.gene048701.t1 | AT4G26830 | 39.912 | 456 | 260 | 5 | 1 | 446 | 1 | 452 | 1.42e-115 | 348 |
MS.gene048701.t1 | AT4G26830 | 40.000 | 460 | 253 | 5 | 6 | 446 | 1 | 456 | 3.22e-115 | 347 |
MS.gene048701.t1 | AT4G29360 | 39.485 | 466 | 246 | 3 | 24 | 456 | 27 | 489 | 1.63e-114 | 348 |
MS.gene048701.t1 | AT4G29360 | 39.485 | 466 | 246 | 3 | 24 | 456 | 37 | 499 | 2.83e-114 | 348 |
MS.gene048701.t1 | AT5G55180 | 41.514 | 436 | 239 | 4 | 23 | 446 | 26 | 457 | 6.99e-114 | 344 |
MS.gene048701.t1 | AT5G56590 | 40.046 | 432 | 245 | 5 | 24 | 445 | 26 | 453 | 3.66e-111 | 338 |
MS.gene048701.t1 | AT5G55180 | 41.395 | 430 | 236 | 4 | 23 | 440 | 26 | 451 | 2.78e-110 | 335 |
MS.gene048701.t1 | AT4G34480 | 37.969 | 453 | 261 | 6 | 3 | 446 | 7 | 448 | 2.71e-96 | 300 |
MS.gene048701.t1 | AT2G16230 | 37.156 | 436 | 263 | 4 | 18 | 446 | 19 | 450 | 1.76e-94 | 295 |
MS.gene048701.t1 | AT3G23770 | 36.591 | 440 | 258 | 6 | 24 | 446 | 37 | 472 | 4.13e-94 | 293 |
MS.gene048701.t1 | AT5G24318 | 36.601 | 459 | 265 | 11 | 2 | 443 | 4 | 453 | 9.28e-92 | 287 |
MS.gene048701.t1 | AT3G07320 | 36.322 | 435 | 260 | 8 | 25 | 446 | 26 | 456 | 2.72e-91 | 286 |
MS.gene048701.t1 | AT5G24318 | 36.484 | 455 | 263 | 11 | 2 | 439 | 4 | 449 | 3.10e-89 | 280 |
MS.gene048701.t1 | AT4G14080 | 34.325 | 437 | 269 | 6 | 24 | 446 | 42 | 474 | 7.84e-89 | 280 |
MS.gene048701.t1 | AT3G55430 | 36.175 | 434 | 252 | 12 | 24 | 445 | 29 | 449 | 1.44e-80 | 258 |
MS.gene048701.t1 | AT3G15800 | 39.077 | 325 | 193 | 3 | 25 | 347 | 44 | 365 | 1.58e-74 | 240 |
MS.gene048701.t1 | AT2G26600 | 37.283 | 346 | 207 | 4 | 25 | 364 | 35 | 376 | 3.39e-71 | 231 |
MS.gene048701.t1 | AT4G18340 | 36.592 | 358 | 214 | 4 | 2 | 354 | 12 | 361 | 7.67e-71 | 230 |
MS.gene048701.t1 | AT4G18340 | 36.592 | 358 | 214 | 4 | 2 | 354 | 12 | 361 | 2.23e-70 | 229 |
MS.gene048701.t1 | AT2G39640 | 33.698 | 457 | 271 | 16 | 1 | 446 | 8 | 443 | 7.56e-69 | 230 |
MS.gene048701.t1 | AT2G39640 | 35.106 | 94 | 60 | 1 | 356 | 449 | 455 | 547 | 1.38e-15 | 79.7 |
MS.gene048701.t1 | AT4G34480 | 38.663 | 344 | 193 | 5 | 112 | 446 | 3 | 337 | 1.20e-68 | 225 |
MS.gene048701.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 24 | 347 | 29 | 350 | 4.12e-68 | 223 |
MS.gene048701.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 24 | 347 | 29 | 350 | 4.98e-68 | 223 |
MS.gene048701.t1 | AT5G42720 | 36.443 | 343 | 213 | 3 | 6 | 346 | 8 | 347 | 6.03e-68 | 224 |
MS.gene048701.t1 | AT4G16260 | 37.356 | 348 | 207 | 6 | 1 | 348 | 1 | 337 | 8.33e-68 | 221 |
MS.gene048701.t1 | AT4G34480 | 37.752 | 347 | 210 | 3 | 3 | 348 | 7 | 348 | 1.01e-67 | 221 |
MS.gene048701.t1 | AT1G32860 | 38.080 | 323 | 193 | 4 | 24 | 343 | 29 | 347 | 1.37e-67 | 223 |
MS.gene048701.t1 | AT5G42100 | 38.529 | 340 | 197 | 6 | 10 | 345 | 17 | 348 | 1.39e-67 | 223 |
MS.gene048701.t1 | AT5G42100 | 38.529 | 340 | 197 | 6 | 10 | 345 | 17 | 348 | 1.88e-67 | 223 |
MS.gene048701.t1 | AT5G24318 | 38.318 | 321 | 179 | 7 | 136 | 445 | 4 | 316 | 3.68e-67 | 219 |
MS.gene048701.t1 | AT3G61810 | 36.310 | 336 | 203 | 4 | 14 | 346 | 45 | 372 | 1.49e-66 | 219 |
MS.gene048701.t1 | AT1G30080 | 36.364 | 341 | 212 | 3 | 2 | 341 | 14 | 350 | 3.93e-66 | 218 |
MS.gene048701.t1 | AT5G24318 | 36.599 | 347 | 205 | 7 | 2 | 341 | 4 | 342 | 4.08e-66 | 218 |
MS.gene048701.t1 | AT1G30080 | 36.364 | 341 | 212 | 3 | 2 | 341 | 14 | 350 | 8.17e-66 | 218 |
MS.gene048701.t1 | AT3G57270 | 38.871 | 319 | 184 | 5 | 24 | 341 | 27 | 335 | 9.49e-65 | 213 |
MS.gene048701.t1 | AT4G16260 | 38.291 | 316 | 184 | 6 | 33 | 348 | 4 | 308 | 1.52e-64 | 212 |
MS.gene048701.t1 | AT5G58090 | 31.973 | 441 | 266 | 17 | 24 | 446 | 22 | 446 | 3.61e-60 | 205 |
MS.gene048701.t1 | AT3G57260 | 37.742 | 310 | 178 | 6 | 24 | 333 | 32 | 326 | 4.90e-59 | 198 |
MS.gene048701.t1 | AT3G24330 | 33.258 | 442 | 261 | 17 | 24 | 446 | 39 | 465 | 6.08e-59 | 202 |
MS.gene048701.t1 | AT3G57260 | 37.742 | 310 | 178 | 6 | 24 | 333 | 48 | 342 | 8.95e-59 | 198 |
MS.gene048701.t1 | AT4G31140 | 31.373 | 459 | 284 | 17 | 1 | 445 | 7 | 448 | 1.85e-58 | 201 |
MS.gene048701.t1 | AT5G18220 | 28.879 | 464 | 294 | 15 | 7 | 450 | 13 | 460 | 1.86e-56 | 196 |
MS.gene048701.t1 | AT2G27500 | 36.727 | 275 | 170 | 2 | 74 | 347 | 1 | 272 | 1.97e-56 | 191 |
MS.gene048701.t1 | AT3G04010 | 29.140 | 477 | 300 | 18 | 24 | 481 | 33 | 490 | 4.05e-56 | 194 |
MS.gene048701.t1 | AT5G20870 | 32.522 | 452 | 255 | 20 | 24 | 446 | 30 | 460 | 1.08e-54 | 191 |
MS.gene048701.t1 | AT2G26600 | 37.993 | 279 | 163 | 4 | 92 | 364 | 8 | 282 | 1.50e-54 | 185 |
MS.gene048701.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 5.43e-54 | 189 |
MS.gene048701.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 5.43e-54 | 189 |
MS.gene048701.t1 | AT1G77780 | 32.258 | 341 | 218 | 7 | 3 | 341 | 1 | 330 | 1.25e-53 | 184 |
MS.gene048701.t1 | AT5G58480 | 31.637 | 452 | 280 | 14 | 24 | 462 | 26 | 461 | 1.07e-52 | 185 |
MS.gene048701.t1 | AT4G17180 | 31.749 | 463 | 262 | 18 | 8 | 445 | 7 | 440 | 5.02e-52 | 183 |
MS.gene048701.t1 | AT3G55780 | 34.700 | 317 | 198 | 7 | 38 | 351 | 49 | 359 | 1.21e-51 | 180 |
MS.gene048701.t1 | AT5G20340 | 34.769 | 325 | 193 | 8 | 24 | 343 | 43 | 353 | 1.56e-51 | 179 |
MS.gene048701.t1 | AT3G57240 | 35.604 | 323 | 190 | 8 | 24 | 345 | 35 | 340 | 6.47e-51 | 177 |
MS.gene048701.t1 | AT5G20330 | 34.877 | 324 | 194 | 7 | 24 | 343 | 34 | 344 | 9.80e-51 | 176 |
MS.gene048701.t1 | AT1G64760 | 30.248 | 443 | 271 | 18 | 24 | 446 | 25 | 449 | 2.10e-50 | 179 |
MS.gene048701.t1 | AT1G64760 | 30.248 | 443 | 271 | 18 | 24 | 446 | 25 | 449 | 2.10e-50 | 179 |
MS.gene048701.t1 | AT5G20390 | 33.537 | 328 | 193 | 8 | 24 | 343 | 33 | 343 | 2.09e-49 | 173 |
MS.gene048701.t1 | AT3G46570 | 36.842 | 323 | 190 | 9 | 24 | 341 | 27 | 340 | 2.65e-49 | 173 |
MS.gene048701.t1 | AT1G33220 | 33.117 | 308 | 191 | 5 | 24 | 328 | 34 | 329 | 1.47e-48 | 170 |
MS.gene048701.t1 | AT1G77790 | 32.174 | 345 | 219 | 8 | 1 | 343 | 10 | 341 | 1.18e-45 | 163 |
MS.gene048701.t1 | AT5G64790 | 27.335 | 439 | 289 | 15 | 24 | 446 | 28 | 452 | 2.26e-44 | 163 |
MS.gene048701.t1 | AT5G20560 | 33.333 | 315 | 193 | 6 | 24 | 334 | 34 | 335 | 1.19e-43 | 157 |
MS.gene048701.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 39 | 134 | 9.30e-26 | 103 |
MS.gene048701.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 115 | 210 | 3.02e-25 | 104 |
MS.gene048701.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 19 | 110 | 2.28e-24 | 99.0 |
MS.gene048701.t1 | AT1G66870 | 44.318 | 88 | 49 | 0 | 358 | 445 | 50 | 137 | 5.70e-24 | 97.8 |
MS.gene048701.t1 | AT1G66870 | 43.820 | 89 | 50 | 0 | 357 | 445 | 22 | 110 | 8.04e-24 | 96.7 |
MS.gene048701.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 44 | 135 | 1.13e-23 | 97.8 |
MS.gene048701.t1 | AT1G66852 | 46.067 | 89 | 47 | 1 | 357 | 445 | 22 | 109 | 2.73e-23 | 95.1 |
MS.gene048701.t1 | AT5G63240 | 45.263 | 95 | 49 | 2 | 353 | 445 | 33 | 126 | 1.61e-22 | 93.6 |
MS.gene048701.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 351 | 448 | 12 | 107 | 4.62e-22 | 92.0 |
MS.gene048701.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 351 | 448 | 12 | 107 | 1.10e-21 | 92.8 |
MS.gene048701.t1 | AT4G05430 | 45.783 | 83 | 45 | 0 | 357 | 439 | 44 | 126 | 1.25e-21 | 90.9 |
MS.gene048701.t1 | AT5G35740 | 39.785 | 93 | 55 | 1 | 354 | 445 | 23 | 115 | 2.52e-20 | 87.0 |
MS.gene048701.t1 | AT5G61130 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 4.80e-20 | 88.6 |
MS.gene048701.t1 | AT1G29380 | 44.444 | 90 | 49 | 1 | 361 | 450 | 148 | 236 | 6.84e-20 | 89.7 |
MS.gene048701.t1 | AT1G29380 | 44.706 | 85 | 46 | 1 | 361 | 445 | 148 | 231 | 1.87e-19 | 89.7 |
MS.gene048701.t1 | AT1G66855 | 40.909 | 88 | 52 | 0 | 358 | 445 | 23 | 110 | 2.28e-19 | 84.0 |
MS.gene048701.t1 | AT5G08000 | 46.067 | 89 | 47 | 1 | 358 | 446 | 37 | 124 | 2.47e-19 | 87.0 |
MS.gene048701.t1 | AT4G13600 | 41.573 | 89 | 51 | 1 | 361 | 449 | 61 | 148 | 5.24e-19 | 86.7 |
MS.gene048701.t1 | AT2G30933 | 43.333 | 90 | 50 | 1 | 359 | 448 | 80 | 168 | 6.52e-19 | 86.3 |
MS.gene048701.t1 | AT2G04910 | 42.353 | 85 | 49 | 0 | 361 | 445 | 15 | 99 | 2.28e-18 | 80.9 |
MS.gene048701.t1 | AT5G67460 | 23.560 | 382 | 220 | 11 | 79 | 445 | 53 | 377 | 2.42e-18 | 87.0 |
MS.gene048701.t1 | AT5G08000 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 3.20e-18 | 83.2 |
MS.gene048701.t1 | AT4G09462 | 32.710 | 107 | 71 | 1 | 339 | 445 | 7 | 112 | 4.52e-18 | 80.5 |
MS.gene048701.t1 | AT2G03505 | 40.426 | 94 | 53 | 2 | 360 | 451 | 20 | 112 | 6.30e-18 | 80.1 |
MS.gene048701.t1 | AT2G43670 | 37.895 | 95 | 57 | 1 | 351 | 445 | 25 | 117 | 6.44e-18 | 80.1 |
MS.gene048701.t1 | AT1G78520 | 39.560 | 91 | 53 | 1 | 355 | 445 | 26 | 114 | 8.84e-18 | 79.7 |
MS.gene048701.t1 | AT4G09467 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.73e-18 | 79.3 |
MS.gene048701.t1 | AT4G09464 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.73e-18 | 79.3 |
MS.gene048701.t1 | AT4G09465 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 1.41e-17 | 79.0 |
MS.gene048701.t1 | AT1G09460 | 44.944 | 89 | 46 | 2 | 357 | 445 | 133 | 218 | 2.47e-17 | 83.6 |
MS.gene048701.t1 | AT5G63250 | 40.230 | 87 | 50 | 1 | 361 | 445 | 42 | 128 | 4.59e-17 | 78.2 |
MS.gene048701.t1 | AT4G16165 | 33.019 | 106 | 68 | 1 | 340 | 445 | 8 | 110 | 5.22e-17 | 77.4 |
MS.gene048701.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 7.19e-17 | 80.1 |
MS.gene048701.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 7.19e-17 | 80.1 |
MS.gene048701.t1 | AT4G09090 | 37.234 | 94 | 55 | 2 | 352 | 445 | 25 | 114 | 8.15e-17 | 77.0 |
MS.gene048701.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.14e-16 | 78.2 |
MS.gene048701.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.14e-16 | 78.2 |
MS.gene048701.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.14e-16 | 78.2 |
MS.gene048701.t1 | AT5G63225 | 39.080 | 87 | 52 | 1 | 359 | 445 | 23 | 108 | 3.24e-16 | 75.1 |
MS.gene048701.t1 | AT5G67460 | 23.404 | 376 | 216 | 11 | 79 | 439 | 53 | 371 | 4.98e-16 | 80.1 |
MS.gene048701.t1 | AT2G04910 | 40.000 | 80 | 48 | 0 | 361 | 440 | 15 | 94 | 9.90e-16 | 73.9 |
MS.gene048701.t1 | AT4G09466 | 34.483 | 87 | 56 | 1 | 359 | 445 | 29 | 114 | 1.21e-15 | 73.6 |
MS.gene048701.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.64e-15 | 74.3 |
MS.gene048701.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.64e-15 | 74.3 |
MS.gene048701.t1 | AT5G63230 | 37.931 | 87 | 53 | 1 | 359 | 445 | 24 | 109 | 2.67e-15 | 72.4 |
MS.gene048701.t1 | AT5G53610 | 36.782 | 87 | 53 | 1 | 359 | 445 | 26 | 110 | 4.76e-15 | 71.6 |
MS.gene048701.t1 | AT5G53600 | 37.778 | 90 | 54 | 1 | 356 | 445 | 24 | 111 | 2.00e-14 | 70.1 |
MS.gene048701.t1 | AT1G13830 | 36.667 | 90 | 54 | 2 | 358 | 445 | 32 | 120 | 1.97e-12 | 67.0 |
MS.gene048701.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 21 | 100 | 2.91e-12 | 66.6 |
MS.gene048701.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 17 | 96 | 3.49e-12 | 66.2 |
MS.gene048701.t1 | AT2G29735 | 32.584 | 89 | 57 | 2 | 359 | 445 | 29 | 116 | 4.85e-12 | 63.2 |
MS.gene048701.t1 | AT1G13830 | 36.782 | 87 | 52 | 2 | 361 | 445 | 21 | 106 | 9.76e-12 | 64.7 |
MS.gene048701.t1 | AT2G43660 | 30.000 | 110 | 74 | 1 | 339 | 445 | 9 | 118 | 1.02e-11 | 62.4 |
MS.gene048701.t1 | AT2G43660 | 33.721 | 86 | 57 | 0 | 360 | 445 | 34 | 119 | 2.58e-11 | 61.2 |
MS.gene048701.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 311 | 394 | 3.62e-11 | 65.5 |
MS.gene048701.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 310 | 393 | 4.12e-11 | 65.1 |
Find 99 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAATTCCACAGCTTCAAAT+TGG | 0.180168 | 3.2:+60917716 | MS.gene048701:CDS |
TGCATTGCAGAACCATTTAT+TGG | 0.207713 | 3.2:+60917505 | MS.gene048701:intron |
CCCGGGGCGCTTTGGAGTTC+CGG | 0.235746 | 3.2:-60918346 | None:intergenic |
GATTCTTTGTTTGGTGGAAT+TGG | 0.284643 | 3.2:-60918108 | None:intergenic |
GACAGGTTCAGGTGCAGTTT+TGG | 0.297814 | 3.2:+60918488 | MS.gene048701:CDS |
ATTCCGGCCTGCAGCATCTT+TGG | 0.306131 | 3.2:-60918561 | None:intergenic |
CCAATGTTCACCCCAATAAA+TGG | 0.317808 | 3.2:-60917517 | None:intergenic |
ATTGCTAGAAGCTCTTCATT+AGG | 0.318741 | 3.2:-60917685 | None:intergenic |
TGTGATAGGACTTCTAATAT+TGG | 0.322418 | 3.2:+60919449 | MS.gene048701:CDS |
GCATTGCAGAACCATTTATT+GGG | 0.336407 | 3.2:+60917506 | MS.gene048701:intron |
GCATGAGCAACAACATTATC+AGG | 0.341654 | 3.2:-60918651 | None:intergenic |
GAATCAATAGATTCTTTGTT+TGG | 0.344151 | 3.2:-60918117 | None:intergenic |
AGTGTTGCATTAGGCTCATT+AGG | 0.359603 | 3.2:-60918270 | None:intergenic |
CATTTATTGGGGTGAACATT+GGG | 0.360165 | 3.2:+60917518 | MS.gene048701:CDS |
CACGGTTCTTGTATATTTCC+AGG | 0.363901 | 3.2:+60919234 | MS.gene048701:CDS |
TTGCTAGAAGCTCTTCATTA+GGG | 0.364621 | 3.2:-60917684 | None:intergenic |
CTCAAATGGTATAATCCCTT+TGG | 0.365063 | 3.2:+60918068 | MS.gene048701:CDS |
CCCGTGGTGGTGACCGAAAC+CGG | 0.365853 | 3.2:+60918228 | MS.gene048701:CDS |
AAATGTGATGGTGCAGGGGC+AGG | 0.372606 | 3.2:-60919375 | None:intergenic |
AGAAGCCTTCTAATTGTGAT+AGG | 0.384591 | 3.2:+60919435 | MS.gene048701:CDS |
TGATGCTTATTATCATAAGA+TGG | 0.388926 | 3.2:+60918686 | MS.gene048701:CDS |
ACACCAATCCCGGGGCGCTT+TGG | 0.391176 | 3.2:-60918354 | None:intergenic |
TGCTGCAGGCCGGAATAGAT+TGG | 0.408046 | 3.2:+60918568 | MS.gene048701:CDS |
ATGTGATGGTGCAGGGGCAG+GGG | 0.412267 | 3.2:-60919373 | None:intergenic |
TCCACAAGCCCAATCTATTC+CGG | 0.415626 | 3.2:-60918577 | None:intergenic |
GGATTGTTCTCCATTGTTGC+AGG | 0.417343 | 3.2:+60918611 | MS.gene048701:CDS |
GTCAATTGCAAAACATAAAC+AGG | 0.426258 | 3.2:-60918468 | None:intergenic |
GAAGTCCTATCACAATTAGA+AGG | 0.426705 | 3.2:-60919440 | None:intergenic |
CTAACAGCACTATCAAAATC+AGG | 0.428623 | 3.2:+60917640 | MS.gene048701:CDS |
AATGAAGAGCTTCTAGCAAT+TGG | 0.431558 | 3.2:+60917688 | MS.gene048701:CDS |
AATGTGATGGTGCAGGGGCA+GGG | 0.433832 | 3.2:-60919374 | None:intergenic |
GAATCAAGTATGATGGTAGA+AGG | 0.444776 | 3.2:-60917919 | None:intergenic |
GAGTCCATGTAGTCATAGTA+AGG | 0.444995 | 3.2:-60918048 | None:intergenic |
TACAACGAGGACAAACAGCC+AGG | 0.445369 | 3.2:+60918399 | MS.gene048701:CDS |
CCATTTATTGGGGTGAACAT+TGG | 0.447812 | 3.2:+60917517 | MS.gene048701:CDS |
TGATTCATTTCCACCTTCAC+AGG | 0.448300 | 3.2:+60917936 | MS.gene048701:CDS |
AAGCATGTGTTGAATAAAAC+CGG | 0.449451 | 3.2:+60918327 | MS.gene048701:CDS |
GCATTGACAAGTGTTGCATT+AGG | 0.454856 | 3.2:-60918279 | None:intergenic |
ATAGATTGGGCTTGTGGACC+TGG | 0.458565 | 3.2:+60918582 | MS.gene048701:CDS |
CCGGAACTCCAAAGCGCCCC+GGG | 0.463307 | 3.2:+60918346 | MS.gene048701:CDS |
ACTCCAAAGCGCCCCGGGAT+TGG | 0.468053 | 3.2:+60918351 | MS.gene048701:CDS |
ATAGTGCTGTTAGCATAGCT+TGG | 0.468643 | 3.2:-60917630 | None:intergenic |
GAATTCCACAGCTTCAAATT+GGG | 0.472855 | 3.2:+60917717 | MS.gene048701:CDS |
AGCAATCTGTGTTGGTTCTG+AGG | 0.477136 | 3.2:+60917783 | MS.gene048701:CDS |
GATGCTTATTATCATAAGAT+GGG | 0.483558 | 3.2:+60918687 | MS.gene048701:CDS |
CCGGTTTCGGTCACCACCAC+GGG | 0.484683 | 3.2:-60918228 | None:intergenic |
ATTCAGTGATGTGTTAAAGA+AGG | 0.489701 | 3.2:-60917959 | None:intergenic |
TATGACTACATGGACTCAAA+TGG | 0.493197 | 3.2:+60918054 | MS.gene048701:CDS |
AGGACTTCTAATATTGGAAG+TGG | 0.502042 | 3.2:+60919455 | MS.gene048701:CDS |
ATTGCTGTGATATTTGTGTC+TGG | 0.511110 | 3.2:-60917766 | None:intergenic |
GCTGCAGGCCGGAATAGATT+GGG | 0.515672 | 3.2:+60918569 | MS.gene048701:CDS |
GCCGGAATAGATTGGGCTTG+TGG | 0.517366 | 3.2:+60918576 | MS.gene048701:CDS |
ACCGGAACTCCAAAGCGCCC+CGG | 0.518430 | 3.2:+60918345 | MS.gene048701:CDS |
TGGTGGTGACCGAAACCGGC+TGG | 0.522429 | 3.2:+60918232 | MS.gene048701:CDS |
TGGAAATGAATCAAGTATGA+TGG | 0.522752 | 3.2:-60917926 | None:intergenic |
TCAATAGATTCTTTGTTTGG+TGG | 0.525317 | 3.2:-60918114 | None:intergenic |
ATAAGTACTAACACCAATCC+CGG | 0.532396 | 3.2:-60918364 | None:intergenic |
TCTACTGTTGTGGCTGATGA+AGG | 0.533308 | 3.2:+60916141 | MS.gene048701:CDS |
GGCTTGTGGACCTGGAAAAG+TGG | 0.537036 | 3.2:+60918590 | MS.gene048701:CDS |
TGAAGAGTGCATAATCCAAA+GGG | 0.538133 | 3.2:-60918083 | None:intergenic |
TTACCCTTACTATGACTACA+TGG | 0.538605 | 3.2:+60918044 | MS.gene048701:CDS |
GTGAGGCATGTCTGAGAGAT+CGG | 0.540893 | 3.2:-60917542 | None:intergenic |
TGGGGACTATTTGATTCGAA+TGG | 0.540995 | 3.2:+60918441 | MS.gene048701:CDS |
TTGGGTTTCTCGCAATGTGT+TGG | 0.542236 | 3.2:+60917735 | MS.gene048701:CDS |
ACTTACTGTGTTGCTAAAGA+TGG | 0.553819 | 3.2:+60918531 | MS.gene048701:CDS |
GAAACCGGCTGGCCTTCAAA+AGG | 0.554209 | 3.2:+60918243 | MS.gene048701:CDS |
GATTGTTCTCCATTGTTGCA+GGG | 0.554686 | 3.2:+60918612 | MS.gene048701:CDS |
GTTCTTGTATATTTCCAGGA+AGG | 0.555329 | 3.2:+60919238 | MS.gene048701:CDS |
TGAGTAATGAAGAAGTGTGT+TGG | 0.555345 | 3.2:-60918139 | None:intergenic |
GATTGCAAGAAATCAAGCAT+TGG | 0.564353 | 3.2:-60917994 | None:intergenic |
AGAAACCCAATTTGAAGCTG+TGG | 0.569539 | 3.2:-60917722 | None:intergenic |
AGCAGTGCTACTACTTGAGT+AGG | 0.573355 | 3.2:-60917565 | None:intergenic |
GGTCACCACCACGGGAATGT+TGG | 0.573862 | 3.2:-60918220 | None:intergenic |
TAAGTACTAACACCAATCCC+GGG | 0.577513 | 3.2:-60918363 | None:intergenic |
TGACTTACTTGGATCTGAAG+TGG | 0.578075 | 3.2:-60918754 | None:intergenic |
GATCCAAAGATGCTGCAGGC+CGG | 0.581893 | 3.2:+60918558 | MS.gene048701:CDS |
ACCGGCTGGCCTTCAAAAGG+TGG | 0.585432 | 3.2:+60918246 | MS.gene048701:CDS |
TTGAAGAGTGCATAATCCAA+AGG | 0.590631 | 3.2:-60918084 | None:intergenic |
GATCAATATTCGATGCGACA+AGG | 0.591217 | 3.2:-60917870 | None:intergenic |
CATTGCAGAACCATTTATTG+GGG | 0.592068 | 3.2:+60917507 | MS.gene048701:intron |
TGCTGATCCAAAGATGCTGC+AGG | 0.594791 | 3.2:+60918554 | MS.gene048701:CDS |
GCCGGTTTCGGTCACCACCA+CGG | 0.596875 | 3.2:-60918229 | None:intergenic |
AATATCACAGCAATCTGTGT+TGG | 0.603144 | 3.2:+60917775 | MS.gene048701:CDS |
ATCAATATTCGATGCGACAA+GGG | 0.606226 | 3.2:-60917869 | None:intergenic |
TTAAAGAAGGCCTGTGAAGG+TGG | 0.612595 | 3.2:-60917946 | None:intergenic |
GCAGTGCTACTACTTGAGTA+GGG | 0.617916 | 3.2:-60917564 | None:intergenic |
GCTACTACTTGAGTAGGGTG+AGG | 0.620961 | 3.2:-60917559 | None:intergenic |
ACATTATCAGGATCATAGCA+TGG | 0.626154 | 3.2:-60918639 | None:intergenic |
AGTCCATGTAGTCATAGTAA+GGG | 0.626629 | 3.2:-60918047 | None:intergenic |
AAGCATGAGATAAGATTGAG+TGG | 0.629287 | 3.2:-60918016 | None:intergenic |
ACAACGAGGACAAACAGCCA+GGG | 0.633838 | 3.2:+60918400 | MS.gene048701:CDS |
AAGAAGAAAATGCATAACCA+TGG | 0.646101 | 3.2:-60916100 | None:intergenic |
AGTATGATGGTAGAAGGAAG+CGG | 0.649247 | 3.2:-60917913 | None:intergenic |
GTGTTAAAGAAGGCCTGTGA+AGG | 0.655577 | 3.2:-60917949 | None:intergenic |
CAACGAGGACAAACAGCCAG+GGG | 0.691863 | 3.2:+60918401 | MS.gene048701:CDS |
TTACACCAACATTCCCGTGG+TGG | 0.695713 | 3.2:+60918215 | MS.gene048701:CDS |
AAATTACACCAACATTCCCG+TGG | 0.711078 | 3.2:+60918212 | MS.gene048701:CDS |
AAGTACTAACACCAATCCCG+GGG | 0.721527 | 3.2:-60918362 | None:intergenic |
TATCTACGAGCTCTACAACG+AGG | 0.790392 | 3.2:+60918386 | MS.gene048701:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTATTAAATATGATGATA+AGG | + | chr3.2:60916951-60916970 | MS.gene048701:intron | 15.0% |
!! | GTATCAAAATAAAACTATTT+AGG | - | chr3.2:60918969-60918988 | None:intergenic | 15.0% |
!! | TCTATTAAATATGATGATAA+GGG | + | chr3.2:60916952-60916971 | MS.gene048701:intron | 15.0% |
!!! | AATAAAACATGTTTATGTTT+TGG | + | chr3.2:60916249-60916268 | MS.gene048701:intron | 15.0% |
!!! | TTTTTGAGAATTTTTTAACT+CGG | + | chr3.2:60918884-60918903 | MS.gene048701:intron | 15.0% |
!! | ATGTGAGTATTTGAAAAATA+TGG | - | chr3.2:60917135-60917154 | None:intergenic | 20.0% |
!! | CTAAAATAGCTCAAAAAAAT+TGG | + | chr3.2:60916770-60916789 | MS.gene048701:intron | 20.0% |
!! | GAAAGAAAATTCGATAAAAA+AGG | + | chr3.2:60916370-60916389 | MS.gene048701:intron | 20.0% |
!! | TATTCTTGATAAATTATTGC+AGG | + | chr3.2:60917090-60917109 | MS.gene048701:intron | 20.0% |
!! | TATTTGAAAAATATGGTTGA+AGG | - | chr3.2:60917128-60917147 | None:intergenic | 20.0% |
!!! | TTCAAATATAGTCAAGTTTT+CGG | - | chr3.2:60917446-60917465 | None:intergenic | 20.0% |
!!! | TTTTGTTCTTAAATGTGTAA+AGG | + | chr3.2:60917219-60917238 | MS.gene048701:intron | 20.0% |
! | AAAATCCTACAAAAAAAGGT+GGG | - | chr3.2:60916447-60916466 | None:intergenic | 25.0% |
! | AAACATGCTTTCTAACAAAA+GGG | - | chr3.2:60916320-60916339 | None:intergenic | 25.0% |
! | AAGTAAAGTTGAAATGAAGA+TGG | + | chr3.2:60916866-60916885 | MS.gene048701:intron | 25.0% |
! | ACTAATGAAAGATACATTTG+AGG | - | chr3.2:60917352-60917371 | None:intergenic | 25.0% |
! | AGAAAATTCGATAAAAAAGG+AGG | + | chr3.2:60916373-60916392 | MS.gene048701:intron | 25.0% |
! | AGTAAAGTTGAAATGAAGAT+GGG | + | chr3.2:60916867-60916886 | MS.gene048701:intron | 25.0% |
! | ATCCAATTCATATGTATTGT+CGG | - | chr3.2:60919129-60919148 | None:intergenic | 25.0% |
! | ATTAAATATGATGATAAGGG+TGG | + | chr3.2:60916955-60916974 | MS.gene048701:intron | 25.0% |
! | CCAACAAGGAATAATATATA+TGG | - | chr3.2:60916191-60916210 | None:intergenic | 25.0% |
! | CCATATATATTATTCCTTGT+TGG | + | chr3.2:60916188-60916207 | MS.gene048701:intron | 25.0% |
! | GAATCAATAGATTCTTTGTT+TGG | - | chr3.2:60918120-60918139 | None:intergenic | 25.0% |
! | GATGCTTATTATCATAAGAT+GGG | + | chr3.2:60918687-60918706 | MS.gene048701:CDS | 25.0% |
! | TAAACATGCTTTCTAACAAA+AGG | - | chr3.2:60916321-60916340 | None:intergenic | 25.0% |
! | TGATGCTTATTATCATAAGA+TGG | + | chr3.2:60918686-60918705 | MS.gene048701:CDS | 25.0% |
! | TTTCGTAATATCAAAGTGAA+AGG | - | chr3.2:60918780-60918799 | None:intergenic | 25.0% |
!! | AAAGTTTGAAACCCTAATTA+GGG | + | chr3.2:60916583-60916602 | MS.gene048701:intron | 25.0% |
!! | AATGATTTATCGATTGTGAT+TGG | + | chr3.2:60919079-60919098 | MS.gene048701:intron | 25.0% |
!! | AGATGCATTTATGTATGTTT+TGG | - | chr3.2:60917280-60917299 | None:intergenic | 25.0% |
!! | CAAGTTTTCGGTAAAATATA+TGG | - | chr3.2:60917434-60917453 | None:intergenic | 25.0% |
!! | TTCTTTCTTTATTGCACTTT+TGG | - | chr3.2:60916827-60916846 | None:intergenic | 25.0% |
!!! | AAATTTTGGAGAAAATTGGT+AGG | + | chr3.2:60916711-60916730 | MS.gene048701:intron | 25.0% |
!!! | AATTTTGGAGAAAATTGGTA+GGG | + | chr3.2:60916712-60916731 | MS.gene048701:intron | 25.0% |
!!! | GTGTAAATTTTGGAGAAAAT+TGG | + | chr3.2:60916707-60916726 | MS.gene048701:intron | 25.0% |
AAATCCTACAAAAAAAGGTG+GGG | - | chr3.2:60916446-60916465 | None:intergenic | 30.0% | |
AACATGCTTTCTAACAAAAG+GGG | - | chr3.2:60916319-60916338 | None:intergenic | 30.0% | |
AAGCATGTGTTGAATAAAAC+CGG | + | chr3.2:60918327-60918346 | MS.gene048701:CDS | 30.0% | |
AATAGATCTAAATACTGCAG+TGG | - | chr3.2:60916938-60916957 | None:intergenic | 30.0% | |
ACTACATATATCAAACTGTG+AGG | - | chr3.2:60917006-60917025 | None:intergenic | 30.0% | |
AGGATATTCTGAATGATTGT+AGG | + | chr3.2:60919210-60919229 | MS.gene048701:intron | 30.0% | |
ATCACAAAGAGAAAAACACA+AGG | - | chr3.2:60916473-60916492 | None:intergenic | 30.0% | |
ATTCAGTGATGTGTTAAAGA+AGG | - | chr3.2:60917962-60917981 | None:intergenic | 30.0% | |
CAAAATCCTACAAAAAAAGG+TGG | - | chr3.2:60916448-60916467 | None:intergenic | 30.0% | |
CACTTTGATATTACGAAAGA+GGG | + | chr3.2:60918782-60918801 | MS.gene048701:intron | 30.0% | |
CTAATTAGGGTTTCAAACTT+TGG | - | chr3.2:60916584-60916603 | None:intergenic | 30.0% | |
CTACATATATCAAACTGTGA+GGG | - | chr3.2:60917005-60917024 | None:intergenic | 30.0% | |
GGTCAAAATCCTACAAAAAA+AGG | - | chr3.2:60916451-60916470 | None:intergenic | 30.0% | |
GTAAAGTTGAAATGAAGATG+GGG | + | chr3.2:60916868-60916887 | MS.gene048701:intron | 30.0% | |
GTCAATAAATTACACCATCT+CGG | + | chr3.2:60916685-60916704 | MS.gene048701:intron | 30.0% | |
GTCAATTGCAAAACATAAAC+AGG | - | chr3.2:60918471-60918490 | None:intergenic | 30.0% | |
TCACAAAGAGAAAAACACAA+GGG | - | chr3.2:60916472-60916491 | None:intergenic | 30.0% | |
TCACTTTGATATTACGAAAG+AGG | + | chr3.2:60918781-60918800 | MS.gene048701:intron | 30.0% | |
TGGAAATGAATCAAGTATGA+TGG | - | chr3.2:60917929-60917948 | None:intergenic | 30.0% | |
TGTGATAGGACTTCTAATAT+TGG | + | chr3.2:60919449-60919468 | MS.gene048701:CDS | 30.0% | |
! | AAGGAGGTTAATTGTGTTTT+TGG | + | chr3.2:60916389-60916408 | MS.gene048701:intron | 30.0% |
! | ACTAAGACTTTTGCTACATT+TGG | - | chr3.2:60917823-60917842 | None:intergenic | 30.0% |
! | CAAAGTTTGAAACCCTAATT+AGG | + | chr3.2:60916582-60916601 | MS.gene048701:intron | 30.0% |
! | CTAAGACTTTTGCTACATTT+GGG | - | chr3.2:60917822-60917841 | None:intergenic | 30.0% |
! | GTTTATGTTTTGCAATTGAC+AGG | + | chr3.2:60918471-60918490 | MS.gene048701:CDS | 30.0% |
! | TCAATAGATTCTTTGTTTGG+TGG | - | chr3.2:60918117-60918136 | None:intergenic | 30.0% |
! | TGCGTCTTTTATAGTTAGTT+TGG | + | chr3.2:60917325-60917344 | MS.gene048701:intron | 30.0% |
!! | ATTTTGGAGAAAATTGGTAG+GGG | + | chr3.2:60916713-60916732 | MS.gene048701:intron | 30.0% |
!! | GAAAAATGTTTTTACCTTCC+TGG | - | chr3.2:60919255-60919274 | None:intergenic | 30.0% |
!!! | CATGTTTATGTTTTGGTGTT+TGG | + | chr3.2:60916256-60916275 | MS.gene048701:intron | 30.0% |
!!! | GTTTTGGCTAATGATACAAA+AGG | + | chr3.2:60918504-60918523 | MS.gene048701:CDS | 30.0% |
!!! | TCAGAAAAGCTTACTTTTTG+AGG | + | chr3.2:60917057-60917076 | MS.gene048701:intron | 30.0% |
AAAGTGAAAGGTGACTTACT+TGG | - | chr3.2:60918768-60918787 | None:intergenic | 35.0% | |
AACGATGTCAAGCACAAATT+TGG | - | chr3.2:60916516-60916535 | None:intergenic | 35.0% | |
AACTCGATAGAAAAGCTGTT+TGG | - | chr3.2:60916553-60916572 | None:intergenic | 35.0% | |
AAGCATGAGATAAGATTGAG+TGG | - | chr3.2:60918019-60918038 | None:intergenic | 35.0% | |
AATATCACAGCAATCTGTGT+TGG | + | chr3.2:60917775-60917794 | MS.gene048701:CDS | 35.0% | |
AATCGCACAATTGTGATACT+TGG | + | chr3.2:60916799-60916818 | MS.gene048701:intron | 35.0% | |
AATGAAGAGCTTCTAGCAAT+TGG | + | chr3.2:60917688-60917707 | MS.gene048701:CDS | 35.0% | |
AATTAGGGATTTCGCTTTCA+TGG | + | chr3.2:60916598-60916617 | MS.gene048701:intron | 35.0% | |
ACAGAAAAAACACACCAACA+AGG | - | chr3.2:60916205-60916224 | None:intergenic | 35.0% | |
ACATTATCAGGATCATAGCA+TGG | - | chr3.2:60918642-60918661 | None:intergenic | 35.0% | |
ACGATGTCAAGCACAAATTT+GGG | - | chr3.2:60916515-60916534 | None:intergenic | 35.0% | |
ACGCTTGTAAGCGAAAATAT+TGG | - | chr3.2:60919315-60919334 | None:intergenic | 35.0% | |
ACTCGATAGAAAAGCTGTTT+GGG | - | chr3.2:60916552-60916571 | None:intergenic | 35.0% | |
AGAAGCCTTCTAATTGTGAT+AGG | + | chr3.2:60919435-60919454 | MS.gene048701:CDS | 35.0% | |
AGGACTTCTAATATTGGAAG+TGG | + | chr3.2:60919455-60919474 | MS.gene048701:CDS | 35.0% | |
AGGGGACTACAAAATTACAA+AGG | + | chr3.2:60916731-60916750 | MS.gene048701:intron | 35.0% | |
AGTCCATGTAGTCATAGTAA+GGG | - | chr3.2:60918050-60918069 | None:intergenic | 35.0% | |
ATAAGTACTAACACCAATCC+CGG | - | chr3.2:60918367-60918386 | None:intergenic | 35.0% | |
ATCAATATTCGATGCGACAA+GGG | - | chr3.2:60917872-60917891 | None:intergenic | 35.0% | |
ATCGCACAATTGTGATACTT+GGG | + | chr3.2:60916800-60916819 | MS.gene048701:intron | 35.0% | |
ATTAGGGATTTCGCTTTCAT+GGG | + | chr3.2:60916599-60916618 | MS.gene048701:intron | 35.0% | |
ATTGCTAGAAGCTCTTCATT+AGG | - | chr3.2:60917688-60917707 | None:intergenic | 35.0% | |
ATTGCTGTGATATTTGTGTC+TGG | - | chr3.2:60917769-60917788 | None:intergenic | 35.0% | |
CATTGCAGAACCATTTATTG+GGG | + | chr3.2:60917507-60917526 | MS.gene048701:intron | 35.0% | |
CATTTATTGGGGTGAACATT+GGG | + | chr3.2:60917518-60917537 | MS.gene048701:CDS | 35.0% | |
CTAACAGCACTATCAAAATC+AGG | + | chr3.2:60917640-60917659 | MS.gene048701:CDS | 35.0% | |
CTAGTATCATAGTCTGACTA+AGG | + | chr3.2:60919190-60919209 | MS.gene048701:intron | 35.0% | |
CTCAAATGGTATAATCCCTT+TGG | + | chr3.2:60918068-60918087 | MS.gene048701:CDS | 35.0% | |
CTCCGACAATACATATGAAT+TGG | + | chr3.2:60919124-60919143 | MS.gene048701:intron | 35.0% | |
GAAAGCGAAATCCCTAATTA+GGG | - | chr3.2:60916597-60916616 | None:intergenic | 35.0% | |
GAAGTCCTATCACAATTAGA+AGG | - | chr3.2:60919443-60919462 | None:intergenic | 35.0% | |
GAATCAAGTATGATGGTAGA+AGG | - | chr3.2:60917922-60917941 | None:intergenic | 35.0% | |
GAATTCCACAGCTTCAAATT+GGG | + | chr3.2:60917717-60917736 | MS.gene048701:CDS | 35.0% | |
GATTGCAAGAAATCAAGCAT+TGG | - | chr3.2:60917997-60918016 | None:intergenic | 35.0% | |
GCATCTTTCGTTAGTCAATT+TGG | + | chr3.2:60917294-60917313 | MS.gene048701:intron | 35.0% | |
GCATTGCAGAACCATTTATT+GGG | + | chr3.2:60917506-60917525 | MS.gene048701:intron | 35.0% | |
GCATTGTCAGAGAAAAATTG+GGG | + | chr3.2:60918423-60918442 | MS.gene048701:CDS | 35.0% | |
GGCATTGTCAGAGAAAAATT+GGG | + | chr3.2:60918422-60918441 | MS.gene048701:CDS | 35.0% | |
GGGACTACAAAATTACAAAG+GGG | + | chr3.2:60916733-60916752 | MS.gene048701:intron | 35.0% | |
GGGGACTACAAAATTACAAA+GGG | + | chr3.2:60916732-60916751 | MS.gene048701:intron | 35.0% | |
GTTCTTGTATATTTCCAGGA+AGG | + | chr3.2:60919238-60919257 | MS.gene048701:CDS | 35.0% | |
TATGACTACATGGACTCAAA+TGG | + | chr3.2:60918054-60918073 | MS.gene048701:CDS | 35.0% | |
TCGGTAAAATATATGGAACG+AGG | - | chr3.2:60917427-60917446 | None:intergenic | 35.0% | |
TGAAAGCGAAATCCCTAATT+AGG | - | chr3.2:60916598-60916617 | None:intergenic | 35.0% | |
TGCATTGCAGAACCATTTAT+TGG | + | chr3.2:60917505-60917524 | MS.gene048701:intron | 35.0% | |
TGGTGTTTGGATATTGCATT+AGG | + | chr3.2:60916269-60916288 | MS.gene048701:intron | 35.0% | |
TTACCCTTACTATGACTACA+TGG | + | chr3.2:60918044-60918063 | MS.gene048701:CDS | 35.0% | |
TTCTGAATGATTGTAGGTCA+CGG | + | chr3.2:60919216-60919235 | MS.gene048701:intron | 35.0% | |
TTGCTAGAAGCTCTTCATTA+GGG | - | chr3.2:60917687-60917706 | None:intergenic | 35.0% | |
TTTAGGCAAAATTGCACTTG+CGG | - | chr3.2:60918952-60918971 | None:intergenic | 35.0% | |
! | ACTTACTGTGTTGCTAAAGA+TGG | + | chr3.2:60918531-60918550 | MS.gene048701:CDS | 35.0% |
! | ATAAATGGTTCTGCAATGCA+AGG | - | chr3.2:60917505-60917524 | None:intergenic | 35.0% |
! | GATTCTTTGTTTGGTGGAAT+TGG | - | chr3.2:60918111-60918130 | None:intergenic | 35.0% |
! | TGAAGAGTGCATAATCCAAA+GGG | - | chr3.2:60918086-60918105 | None:intergenic | 35.0% |
! | TGAGTAATGAAGAAGTGTGT+TGG | - | chr3.2:60918142-60918161 | None:intergenic | 35.0% |
! | TTGAAGAGTGCATAATCCAA+AGG | - | chr3.2:60918087-60918106 | None:intergenic | 35.0% |
! | TTTTGCAGTATCTACTGTTG+TGG | + | chr3.2:60916131-60916150 | MS.gene048701:CDS | 35.0% |
! | TTTTGCTACATTTGGGAGTA+TGG | - | chr3.2:60917815-60917834 | None:intergenic | 35.0% |
!! | CGGTCACATTAGTGTTTTTA+AGG | + | chr3.2:60918904-60918923 | MS.gene048701:intron | 35.0% |
AAATTACACCAACATTCCCG+TGG | + | chr3.2:60918212-60918231 | MS.gene048701:CDS | 40.0% | |
AGTATGATGGTAGAAGGAAG+CGG | - | chr3.2:60917916-60917935 | None:intergenic | 40.0% | |
AGTGTTGCATTAGGCTCATT+AGG | - | chr3.2:60918273-60918292 | None:intergenic | 40.0% | |
ATTCAGCGTCTCACACATTT+GGG | + | chr3.2:60917384-60917403 | MS.gene048701:intron | 40.0% | |
CACGGTTCTTGTATATTTCC+AGG | + | chr3.2:60919234-60919253 | MS.gene048701:CDS | 40.0% | |
CCAATGTTCACCCCAATAAA+TGG | - | chr3.2:60917520-60917539 | None:intergenic | 40.0% | |
CCATTTATTGGGGTGAACAT+TGG | + | chr3.2:60917517-60917536 | MS.gene048701:CDS | 40.0% | |
CGAATTCCACAGCTTCAAAT+TGG | + | chr3.2:60917716-60917735 | MS.gene048701:CDS | 40.0% | |
CGATGTCAAGCACAAATTTG+GGG | - | chr3.2:60916514-60916533 | None:intergenic | 40.0% | |
CTCCAAAATTTACACCGAGA+TGG | - | chr3.2:60916702-60916721 | None:intergenic | 40.0% | |
GACTTTCTTGAATAGCACTG+AGG | + | chr3.2:60916911-60916930 | MS.gene048701:intron | 40.0% | |
GAGTCCATGTAGTCATAGTA+AGG | - | chr3.2:60918051-60918070 | None:intergenic | 40.0% | |
GATCAATATTCGATGCGACA+AGG | - | chr3.2:60917873-60917892 | None:intergenic | 40.0% | |
GATGTCAAGCACAAATTTGG+GGG | - | chr3.2:60916513-60916532 | None:intergenic | 40.0% | |
GATTGTTCTCCATTGTTGCA+GGG | + | chr3.2:60918612-60918631 | MS.gene048701:CDS | 40.0% | |
GCATGAGCAACAACATTATC+AGG | - | chr3.2:60918654-60918673 | None:intergenic | 40.0% | |
TAAGTACTAACACCAATCCC+GGG | - | chr3.2:60918366-60918385 | None:intergenic | 40.0% | |
TACAAAGGGGAAAAACACGA+GGG | + | chr3.2:60916746-60916765 | MS.gene048701:intron | 40.0% | |
TCGCACAATTGTGATACTTG+GGG | + | chr3.2:60916801-60916820 | MS.gene048701:intron | 40.0% | |
TGACTTACTTGGATCTGAAG+TGG | - | chr3.2:60918757-60918776 | None:intergenic | 40.0% | |
TGATTCATTTCCACCTTCAC+AGG | + | chr3.2:60917936-60917955 | MS.gene048701:CDS | 40.0% | |
TTACAAAGGGGAAAAACACG+AGG | + | chr3.2:60916745-60916764 | MS.gene048701:intron | 40.0% | |
TTGCACCCAGAAAAATGTGA+TGG | - | chr3.2:60919390-60919409 | None:intergenic | 40.0% | |
TTTGTGGTTATGTGCAGTCT+CGG | + | chr3.2:60919339-60919358 | MS.gene048701:intron | 40.0% | |
! | AGAAAAATGTGATGGTGCAG+GGG | - | chr3.2:60919382-60919401 | None:intergenic | 40.0% |
! | AGAAACCCAATTTGAAGCTG+TGG | - | chr3.2:60917725-60917744 | None:intergenic | 40.0% |
! | ATAGTGCTGTTAGCATAGCT+TGG | - | chr3.2:60917633-60917652 | None:intergenic | 40.0% |
! | CAGAAAAATGTGATGGTGCA+GGG | - | chr3.2:60919383-60919402 | None:intergenic | 40.0% |
! | CTGCACCATCACATTTTTCT+GGG | + | chr3.2:60919382-60919401 | MS.gene048701:CDS | 40.0% |
! | GCATTGACAAGTGTTGCATT+AGG | - | chr3.2:60918282-60918301 | None:intergenic | 40.0% |
! | GCTTGATCGTTTTCCAGTAT+TGG | + | chr3.2:60918830-60918849 | MS.gene048701:intron | 40.0% |
! | GGGCATTGTCAGAGAAAAAT+TGG | + | chr3.2:60918421-60918440 | MS.gene048701:CDS | 40.0% |
! | GTTTTGCAATTGACAGGTTC+AGG | + | chr3.2:60918477-60918496 | MS.gene048701:CDS | 40.0% |
! | TCATTAGGACCACCTTTTGA+AGG | - | chr3.2:60918258-60918277 | None:intergenic | 40.0% |
! | TGGGGACTATTTGATTCGAA+TGG | + | chr3.2:60918441-60918460 | MS.gene048701:CDS | 40.0% |
!! | CACCATCTCGGTGTAAATTT+TGG | + | chr3.2:60916697-60916716 | MS.gene048701:intron | 40.0% |
!! | GCTTACAAGCGTTTGATTTG+TGG | + | chr3.2:60919323-60919342 | MS.gene048701:intron | 40.0% |
!!! | CGCTTTCATGGGTGATTTTT+TGG | + | chr3.2:60916610-60916629 | MS.gene048701:intron | 40.0% |
!!! | TTAGCCCCACCTTTTTTTGT+AGG | + | chr3.2:60916439-60916458 | MS.gene048701:intron | 40.0% |
AAGTACTAACACCAATCCCG+GGG | - | chr3.2:60918365-60918384 | None:intergenic | 45.0% | |
ACAAAGGGGAAAAACACGAG+GGG | + | chr3.2:60916747-60916766 | MS.gene048701:intron | 45.0% | |
ACACAATCGCGATACTTGAG+GGG | - | chr3.2:60916415-60916434 | None:intergenic | 45.0% | |
CACACAATCGCGATACTTGA+GGG | - | chr3.2:60916416-60916435 | None:intergenic | 45.0% | |
CATTCAGCGTCTCACACATT+TGG | + | chr3.2:60917383-60917402 | MS.gene048701:intron | 45.0% | |
GAAATGAAGATGGGGCAGAT+AGG | + | chr3.2:60916876-60916895 | MS.gene048701:intron | 45.0% | |
GAGACTTCAAGGACCAATAC+TGG | - | chr3.2:60918846-60918865 | None:intergenic | 45.0% | |
GGATACATTGTCGTACCTGA+AGG | + | chr3.2:60918925-60918944 | MS.gene048701:intron | 45.0% | |
GGATTGTTCTCCATTGTTGC+AGG | + | chr3.2:60918611-60918630 | MS.gene048701:CDS | 45.0% | |
GTGTTAAAGAAGGCCTGTGA+AGG | - | chr3.2:60917952-60917971 | None:intergenic | 45.0% | |
TATCTACGAGCTCTACAACG+AGG | + | chr3.2:60918386-60918405 | MS.gene048701:CDS | 45.0% | |
TCACACAATCGCGATACTTG+AGG | - | chr3.2:60916417-60916436 | None:intergenic | 45.0% | |
TCCACAAGCCCAATCTATTC+CGG | - | chr3.2:60918580-60918599 | None:intergenic | 45.0% | |
TCTACTGTTGTGGCTGATGA+AGG | + | chr3.2:60916141-60916160 | MS.gene048701:CDS | 45.0% | |
TTAAAGAAGGCCTGTGAAGG+TGG | - | chr3.2:60917949-60917968 | None:intergenic | 45.0% | |
TTCAGCGTCTCACACATTTG+GGG | + | chr3.2:60917385-60917404 | MS.gene048701:intron | 45.0% | |
TTGGGTTTCTCGCAATGTGT+TGG | + | chr3.2:60917735-60917754 | MS.gene048701:CDS | 45.0% | |
! | AGCAGTGCTACTACTTGAGT+AGG | - | chr3.2:60917568-60917587 | None:intergenic | 45.0% |
! | CATGGTTTTCCCTGCAACAA+TGG | - | chr3.2:60918624-60918643 | None:intergenic | 45.0% |
! | CCAGAAAAATGTGATGGTGC+AGG | - | chr3.2:60919384-60919403 | None:intergenic | 45.0% |
! | CCTGCACCATCACATTTTTC+TGG | + | chr3.2:60919381-60919400 | MS.gene048701:CDS | 45.0% |
! | GACGTGTTACTCAACTCTCA+TGG | - | chr3.2:60916668-60916687 | None:intergenic | 45.0% |
! | GCAGTGCTACTACTTGAGTA+GGG | - | chr3.2:60917567-60917586 | None:intergenic | 45.0% |
! | TTTTTCTCTGACAATGCCCC+TGG | - | chr3.2:60918420-60918439 | None:intergenic | 45.0% |
!! | AGCAATCTGTGTTGGTTCTG+AGG | + | chr3.2:60917783-60917802 | MS.gene048701:CDS | 45.0% |
!! | GGAGAACAATCCACTTTTCC+AGG | - | chr3.2:60918603-60918622 | None:intergenic | 45.0% |
!!! | GTGCACGTTTTGAGACTTCA+AGG | - | chr3.2:60918857-60918876 | None:intergenic | 45.0% |
AATTGCACTTGCGGTCCTTC+AGG | - | chr3.2:60918943-60918962 | None:intergenic | 50.0% | |
ACAACGAGGACAAACAGCCA+GGG | + | chr3.2:60918400-60918419 | MS.gene048701:CDS | 50.0% | |
ATAGATTGGGCTTGTGGACC+TGG | + | chr3.2:60918582-60918601 | MS.gene048701:CDS | 50.0% | |
GCTACTACTTGAGTAGGGTG+AGG | - | chr3.2:60917562-60917581 | None:intergenic | 50.0% | |
GTGAGGCATGTCTGAGAGAT+CGG | - | chr3.2:60917545-60917564 | None:intergenic | 50.0% | |
TACAACGAGGACAAACAGCC+AGG | + | chr3.2:60918399-60918418 | MS.gene048701:CDS | 50.0% | |
TGCTGATCCAAAGATGCTGC+AGG | + | chr3.2:60918554-60918573 | MS.gene048701:CDS | 50.0% | |
TTACACCAACATTCCCGTGG+TGG | + | chr3.2:60918215-60918234 | MS.gene048701:CDS | 50.0% | |
! | GACAGGTTCAGGTGCAGTTT+TGG | + | chr3.2:60918488-60918507 | MS.gene048701:CDS | 50.0% |
!! | TTTTGAAGGCCAGCCGGTTT+CGG | - | chr3.2:60918244-60918263 | None:intergenic | 50.0% |
ATTCCGGCCTGCAGCATCTT+TGG | - | chr3.2:60918564-60918583 | None:intergenic | 55.0% | |
CAACGAGGACAAACAGCCAG+GGG | + | chr3.2:60918401-60918420 | MS.gene048701:CDS | 55.0% | |
GATCCAAAGATGCTGCAGGC+CGG | + | chr3.2:60918558-60918577 | MS.gene048701:CDS | 55.0% | |
GCCGGAATAGATTGGGCTTG+TGG | + | chr3.2:60918576-60918595 | MS.gene048701:CDS | 55.0% | |
GCTGCAGGCCGGAATAGATT+GGG | + | chr3.2:60918569-60918588 | MS.gene048701:CDS | 55.0% | |
GGCTTGTGGACCTGGAAAAG+TGG | + | chr3.2:60918590-60918609 | MS.gene048701:CDS | 55.0% | |
TGCTGCAGGCCGGAATAGAT+TGG | + | chr3.2:60918568-60918587 | MS.gene048701:CDS | 55.0% | |
! | AAATGTGATGGTGCAGGGGC+AGG | - | chr3.2:60919378-60919397 | None:intergenic | 55.0% |
! | AATGTGATGGTGCAGGGGCA+GGG | - | chr3.2:60919377-60919396 | None:intergenic | 55.0% |
!! | ACCACCTTTTGAAGGCCAGC+CGG | - | chr3.2:60918250-60918269 | None:intergenic | 55.0% |
!! | GAAACCGGCTGGCCTTCAAA+AGG | + | chr3.2:60918243-60918262 | MS.gene048701:CDS | 55.0% |
GGTCACCACCACGGGAATGT+TGG | - | chr3.2:60918223-60918242 | None:intergenic | 60.0% | |
! | ATGTGATGGTGCAGGGGCAG+GGG | - | chr3.2:60919376-60919395 | None:intergenic | 60.0% |
!! | ACCGGCTGGCCTTCAAAAGG+TGG | + | chr3.2:60918246-60918265 | MS.gene048701:CDS | 60.0% |
CCGGTTTCGGTCACCACCAC+GGG | - | chr3.2:60918231-60918250 | None:intergenic | 65.0% | |
! | ACACCAATCCCGGGGCGCTT+TGG | - | chr3.2:60918357-60918376 | None:intergenic | 65.0% |
! | ACCGGAACTCCAAAGCGCCC+CGG | + | chr3.2:60918345-60918364 | MS.gene048701:CDS | 65.0% |
! | ACTCCAAAGCGCCCCGGGAT+TGG | + | chr3.2:60918351-60918370 | MS.gene048701:CDS | 65.0% |
! | CCCGTGGTGGTGACCGAAAC+CGG | + | chr3.2:60918228-60918247 | MS.gene048701:CDS | 65.0% |
! | GCCGGTTTCGGTCACCACCA+CGG | - | chr3.2:60918232-60918251 | None:intergenic | 65.0% |
! | TGGTGGTGACCGAAACCGGC+TGG | + | chr3.2:60918232-60918251 | MS.gene048701:CDS | 65.0% |
! | CCGGAACTCCAAAGCGCCCC+GGG | + | chr3.2:60918346-60918365 | MS.gene048701:CDS | 70.0% |
!! | CCCGGGGCGCTTTGGAGTTC+CGG | - | chr3.2:60918349-60918368 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 60916102 | 60919488 | 60916102 | ID=MS.gene048701 |
chr3.2 | mRNA | 60916102 | 60919488 | 60916102 | ID=MS.gene048701.t1;Parent=MS.gene048701 |
chr3.2 | exon | 60916102 | 60916162 | 60916102 | ID=MS.gene048701.t1.exon1;Parent=MS.gene048701.t1 |
chr3.2 | CDS | 60916102 | 60916162 | 60916102 | ID=cds.MS.gene048701.t1;Parent=MS.gene048701.t1 |
chr3.2 | exon | 60917515 | 60918768 | 60917515 | ID=MS.gene048701.t1.exon2;Parent=MS.gene048701.t1 |
chr3.2 | CDS | 60917515 | 60918768 | 60917515 | ID=cds.MS.gene048701.t1;Parent=MS.gene048701.t1 |
chr3.2 | exon | 60919232 | 60919259 | 60919232 | ID=MS.gene048701.t1.exon3;Parent=MS.gene048701.t1 |
chr3.2 | CDS | 60919232 | 60919259 | 60919232 | ID=cds.MS.gene048701.t1;Parent=MS.gene048701.t1 |
chr3.2 | exon | 60919356 | 60919488 | 60919356 | ID=MS.gene048701.t1.exon4;Parent=MS.gene048701.t1 |
chr3.2 | CDS | 60919356 | 60919488 | 60919356 | ID=cds.MS.gene048701.t1;Parent=MS.gene048701.t1 |
Gene Sequence |
Protein sequence |