Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048741.t1 | XP_003600716.2 | 96.3 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 1.30E-270 | 941.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048741.t1 | Q9C7U5 | 67.5 | 477 | 148 | 2 | 18 | 488 | 26 | 501 | 2.7e-189 | 662.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048741.t1 | G7J9D2 | 96.3 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 9.2e-271 | 941.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene048741 | MS.gene08923 | PPI |
MS.gene048741 | MS.gene77492 | PPI |
MS.gene79856 | MS.gene048741 | PPI |
MS.gene048741 | MS.gene049885 | PPI |
MS.gene048741 | MS.gene045397 | PPI |
MS.gene08772 | MS.gene048741 | PPI |
MS.gene08924 | MS.gene048741 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048741.t1 | MTR_3g065460 | 96.334 | 491 | 18 | 0 | 1 | 491 | 1 | 491 | 0.0 | 974 |
MS.gene048741.t1 | MTR_5g078200 | 77.143 | 490 | 104 | 3 | 1 | 483 | 1 | 489 | 0.0 | 792 |
MS.gene048741.t1 | MTR_5g078200 | 77.412 | 456 | 96 | 2 | 35 | 483 | 1 | 456 | 0.0 | 746 |
MS.gene048741.t1 | MTR_1g031900 | 68.222 | 450 | 143 | 0 | 1 | 450 | 1 | 450 | 0.0 | 657 |
MS.gene048741.t1 | MTR_1g031900 | 68.233 | 447 | 142 | 0 | 1 | 447 | 1 | 447 | 0.0 | 653 |
MS.gene048741.t1 | MTR_4g132280 | 54.219 | 474 | 212 | 2 | 19 | 490 | 40 | 510 | 0.0 | 525 |
MS.gene048741.t1 | MTR_8g085720 | 50.307 | 489 | 233 | 3 | 8 | 486 | 10 | 498 | 5.28e-170 | 489 |
MS.gene048741.t1 | MTR_3g083580 | 50.000 | 446 | 220 | 2 | 8 | 452 | 10 | 453 | 1.02e-167 | 483 |
MS.gene048741.t1 | MTR_6g088885 | 41.667 | 432 | 240 | 4 | 23 | 445 | 26 | 454 | 1.23e-119 | 360 |
MS.gene048741.t1 | MTR_5g085580 | 41.256 | 446 | 236 | 3 | 24 | 446 | 25 | 467 | 1.37e-116 | 351 |
MS.gene048741.t1 | MTR_1g056640 | 39.479 | 461 | 242 | 3 | 20 | 446 | 34 | 491 | 2.01e-111 | 339 |
MS.gene048741.t1 | MTR_8g102340 | 40.879 | 455 | 222 | 6 | 1 | 445 | 1 | 418 | 2.12e-110 | 336 |
MS.gene048741.t1 | MTR_4g069940 | 36.484 | 455 | 273 | 4 | 5 | 446 | 9 | 460 | 6.41e-99 | 306 |
MS.gene048741.t1 | MTR_8g012400 | 36.819 | 459 | 272 | 8 | 1 | 446 | 6 | 459 | 1.26e-97 | 302 |
MS.gene048741.t1 | MTR_4g088155 | 36.761 | 457 | 266 | 8 | 7 | 446 | 8 | 458 | 5.83e-97 | 300 |
MS.gene048741.t1 | MTR_3g116510 | 36.203 | 453 | 275 | 5 | 5 | 447 | 8 | 456 | 5.57e-94 | 293 |
MS.gene048741.t1 | MTR_7g053500 | 36.009 | 436 | 262 | 6 | 25 | 446 | 27 | 459 | 1.68e-93 | 291 |
MS.gene048741.t1 | MTR_1g022160 | 35.000 | 460 | 262 | 6 | 21 | 447 | 21 | 476 | 7.45e-89 | 280 |
MS.gene048741.t1 | MTR_1g022160 | 34.934 | 458 | 261 | 6 | 21 | 445 | 21 | 474 | 6.11e-87 | 275 |
MS.gene048741.t1 | MTR_4g083500 | 36.089 | 496 | 280 | 13 | 24 | 490 | 44 | 531 | 4.03e-85 | 272 |
MS.gene048741.t1 | MTR_3g080410 | 43.119 | 327 | 182 | 2 | 24 | 349 | 26 | 349 | 4.46e-85 | 266 |
MS.gene048741.t1 | MTR_1g022160 | 34.590 | 451 | 258 | 6 | 21 | 438 | 21 | 467 | 2.32e-84 | 268 |
MS.gene048741.t1 | MTR_7g026340 | 36.281 | 441 | 243 | 11 | 24 | 443 | 23 | 446 | 4.48e-84 | 267 |
MS.gene048741.t1 | MTR_7g053500 | 36.979 | 384 | 225 | 6 | 77 | 446 | 2 | 382 | 1.11e-82 | 261 |
MS.gene048741.t1 | MTR_8g012400 | 36.745 | 381 | 227 | 6 | 77 | 446 | 2 | 379 | 1.39e-80 | 256 |
MS.gene048741.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 5.03e-75 | 241 |
MS.gene048741.t1 | MTR_4g010200 | 38.841 | 345 | 204 | 3 | 7 | 347 | 13 | 354 | 5.59e-75 | 241 |
MS.gene048741.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 6.37e-75 | 240 |
MS.gene048741.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 25 | 350 | 27 | 350 | 1.34e-74 | 240 |
MS.gene048741.t1 | MTR_4g052970 | 38.226 | 327 | 193 | 4 | 24 | 347 | 29 | 349 | 7.48e-72 | 233 |
MS.gene048741.t1 | MTR_1g077990 | 38.272 | 324 | 194 | 4 | 24 | 346 | 31 | 349 | 4.87e-69 | 226 |
MS.gene048741.t1 | MTR_4g084480 | 36.228 | 334 | 208 | 3 | 2 | 334 | 3 | 332 | 3.77e-68 | 223 |
MS.gene048741.t1 | MTR_4g084480 | 36.228 | 334 | 208 | 3 | 2 | 334 | 10 | 339 | 5.17e-68 | 223 |
MS.gene048741.t1 | MTR_4g084480 | 36.228 | 334 | 208 | 3 | 2 | 334 | 10 | 339 | 6.40e-68 | 223 |
MS.gene048741.t1 | MTR_1g022160 | 38.390 | 323 | 194 | 3 | 21 | 341 | 21 | 340 | 6.98e-68 | 224 |
MS.gene048741.t1 | MTR_1g007810 | 39.564 | 321 | 183 | 6 | 24 | 341 | 16 | 328 | 6.37e-67 | 219 |
MS.gene048741.t1 | MTR_2g086530 | 38.080 | 323 | 193 | 3 | 24 | 345 | 8 | 324 | 9.49e-66 | 216 |
MS.gene048741.t1 | MTR_2g086530 | 38.080 | 323 | 193 | 3 | 24 | 345 | 29 | 345 | 1.42e-65 | 217 |
MS.gene048741.t1 | MTR_4g076490 | 37.117 | 326 | 186 | 6 | 24 | 347 | 97 | 405 | 6.74e-65 | 216 |
MS.gene048741.t1 | MTR_4g076255 | 38.199 | 322 | 183 | 6 | 24 | 345 | 25 | 330 | 2.73e-64 | 211 |
MS.gene048741.t1 | MTR_4g076500 | 36.391 | 327 | 196 | 3 | 20 | 345 | 74 | 389 | 3.25e-64 | 213 |
MS.gene048741.t1 | MTR_2g019345 | 35.503 | 338 | 204 | 4 | 1 | 333 | 1 | 329 | 3.35e-64 | 213 |
MS.gene048741.t1 | MTR_4g076470 | 37.463 | 339 | 185 | 9 | 1 | 334 | 1 | 317 | 4.57e-63 | 208 |
MS.gene048741.t1 | MTR_3g116510 | 35.802 | 324 | 196 | 3 | 132 | 447 | 3 | 322 | 5.37e-63 | 208 |
MS.gene048741.t1 | MTR_4g076440 | 35.777 | 341 | 202 | 7 | 1 | 341 | 1 | 324 | 3.85e-62 | 206 |
MS.gene048741.t1 | MTR_1g053320 | 31.808 | 459 | 284 | 15 | 5 | 446 | 11 | 457 | 1.48e-61 | 209 |
MS.gene048741.t1 | MTR_4g076430 | 35.159 | 347 | 204 | 8 | 1 | 345 | 1 | 328 | 1.04e-59 | 199 |
MS.gene048741.t1 | MTR_7g081350 | 36.137 | 321 | 192 | 7 | 24 | 343 | 27 | 335 | 9.42e-59 | 197 |
MS.gene048741.t1 | MTR_4g076570 | 36.452 | 310 | 188 | 3 | 24 | 333 | 22 | 322 | 2.14e-58 | 197 |
MS.gene048741.t1 | MTR_1g010120 | 31.602 | 462 | 276 | 17 | 3 | 445 | 8 | 448 | 2.20e-58 | 200 |
MS.gene048741.t1 | MTR_4g112025 | 30.736 | 462 | 288 | 17 | 4 | 446 | 9 | 457 | 4.90e-58 | 200 |
MS.gene048741.t1 | MTR_2g027560 | 32.420 | 438 | 271 | 13 | 21 | 445 | 25 | 450 | 8.27e-58 | 199 |
MS.gene048741.t1 | MTR_1g052430 | 37.097 | 310 | 186 | 4 | 24 | 333 | 32 | 332 | 2.63e-57 | 196 |
MS.gene048741.t1 | MTR_2g034470 | 37.615 | 327 | 191 | 7 | 24 | 348 | 30 | 345 | 1.02e-55 | 190 |
MS.gene048741.t1 | MTR_2g034440 | 37.778 | 315 | 183 | 7 | 24 | 336 | 22 | 325 | 3.46e-55 | 188 |
MS.gene048741.t1 | MTR_2g034470 | 37.421 | 318 | 186 | 7 | 33 | 348 | 4 | 310 | 5.95e-55 | 187 |
MS.gene048741.t1 | MTR_8g092070 | 30.385 | 441 | 277 | 16 | 22 | 446 | 32 | 458 | 6.68e-55 | 193 |
MS.gene048741.t1 | MTR_3g031770 | 31.403 | 449 | 267 | 14 | 24 | 453 | 27 | 453 | 2.34e-54 | 190 |
MS.gene048741.t1 | MTR_2g034480 | 34.582 | 347 | 211 | 9 | 5 | 348 | 9 | 342 | 5.26e-54 | 186 |
MS.gene048741.t1 | MTR_4g124440 | 30.303 | 462 | 281 | 21 | 5 | 445 | 10 | 451 | 1.12e-52 | 185 |
MS.gene048741.t1 | MTR_7g085390 | 30.023 | 443 | 271 | 16 | 24 | 445 | 26 | 450 | 2.53e-52 | 184 |
MS.gene048741.t1 | MTR_3g108600 | 31.293 | 441 | 248 | 17 | 24 | 445 | 31 | 435 | 5.32e-52 | 183 |
MS.gene048741.t1 | MTR_3g095050 | 29.336 | 467 | 296 | 17 | 7 | 454 | 13 | 464 | 7.43e-52 | 183 |
MS.gene048741.t1 | MTR_6g032820 | 29.953 | 424 | 263 | 17 | 24 | 427 | 26 | 435 | 3.39e-47 | 169 |
MS.gene048741.t1 | MTR_7g081370 | 31.579 | 342 | 206 | 9 | 3 | 343 | 9 | 323 | 3.34e-46 | 164 |
MS.gene048741.t1 | MTR_5g081720 | 33.882 | 304 | 191 | 7 | 40 | 341 | 53 | 348 | 1.35e-41 | 152 |
MS.gene048741.t1 | MTR_4g134280 | 29.630 | 324 | 198 | 13 | 136 | 445 | 29 | 336 | 1.32e-32 | 128 |
MS.gene048741.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 34 | 152 | 2.91e-26 | 104 |
MS.gene048741.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 358 | 479 | 54 | 172 | 6.77e-26 | 104 |
MS.gene048741.t1 | MTR_4g079530 | 39.437 | 142 | 74 | 3 | 357 | 488 | 33 | 172 | 1.01e-25 | 103 |
MS.gene048741.t1 | MTR_4g079530 | 45.745 | 94 | 51 | 0 | 357 | 450 | 33 | 126 | 7.05e-24 | 97.1 |
MS.gene048741.t1 | MTR_8g085390 | 37.815 | 119 | 71 | 2 | 339 | 455 | 6 | 123 | 2.76e-20 | 89.0 |
MS.gene048741.t1 | MTR_4g083070 | 42.202 | 109 | 53 | 3 | 343 | 450 | 11 | 110 | 2.78e-20 | 89.0 |
MS.gene048741.t1 | MTR_8g085440 | 38.889 | 90 | 54 | 1 | 357 | 446 | 28 | 116 | 5.46e-20 | 85.9 |
MS.gene048741.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 4.11e-19 | 87.4 |
MS.gene048741.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 6.40e-19 | 87.8 |
MS.gene048741.t1 | MTR_7g111600 | 46.512 | 86 | 45 | 1 | 361 | 446 | 160 | 244 | 6.60e-19 | 87.8 |
MS.gene048741.t1 | MTR_4g109490 | 48.235 | 85 | 42 | 2 | 361 | 445 | 24 | 106 | 9.70e-19 | 85.5 |
MS.gene048741.t1 | MTR_5g097420 | 42.353 | 85 | 49 | 0 | 359 | 443 | 28 | 112 | 1.77e-18 | 81.6 |
MS.gene048741.t1 | MTR_5g044530 | 41.414 | 99 | 55 | 2 | 352 | 448 | 13 | 110 | 3.92e-18 | 84.3 |
MS.gene048741.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.12e-17 | 81.6 |
MS.gene048741.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 356 | 448 | 103 | 194 | 1.29e-17 | 83.2 |
MS.gene048741.t1 | MTR_4g133735 | 48.837 | 86 | 42 | 2 | 361 | 445 | 28 | 112 | 1.70e-17 | 79.0 |
MS.gene048741.t1 | MTR_8g085420 | 37.647 | 85 | 52 | 1 | 357 | 441 | 28 | 111 | 2.74e-17 | 79.0 |
MS.gene048741.t1 | MTR_4g133730 | 42.353 | 85 | 49 | 0 | 361 | 445 | 28 | 112 | 7.27e-17 | 77.0 |
MS.gene048741.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 353 | 441 | 412 | 498 | 3.79e-16 | 81.6 |
MS.gene048741.t1 | MTR_2g049670 | 45.263 | 95 | 50 | 2 | 361 | 455 | 158 | 250 | 4.56e-16 | 79.7 |
MS.gene048741.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 353 | 441 | 412 | 498 | 4.67e-16 | 81.3 |
MS.gene048741.t1 | MTR_3g048280 | 38.889 | 90 | 54 | 1 | 356 | 445 | 107 | 195 | 1.23e-15 | 76.3 |
MS.gene048741.t1 | MTR_5g015720 | 42.529 | 87 | 47 | 2 | 361 | 445 | 329 | 414 | 2.57e-14 | 75.1 |
MS.gene048741.t1 | MTR_2g072500 | 36.782 | 87 | 53 | 1 | 359 | 445 | 6 | 90 | 9.53e-14 | 67.4 |
MS.gene048741.t1 | MTR_4g036775 | 26.923 | 182 | 121 | 5 | 202 | 381 | 41 | 212 | 5.48e-13 | 68.6 |
MS.gene048741.t1 | MTR_1g116870 | 36.471 | 85 | 53 | 1 | 361 | 445 | 276 | 359 | 1.68e-12 | 69.3 |
MS.gene048741.t1 | MTR_8g085400 | 39.506 | 81 | 45 | 2 | 359 | 439 | 31 | 107 | 2.00e-12 | 64.3 |
MS.gene048741.t1 | MTR_4g036680 | 26.923 | 182 | 121 | 5 | 202 | 381 | 41 | 212 | 2.31e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048741.t1 | AT1G66250 | 67.505 | 477 | 148 | 2 | 18 | 488 | 26 | 501 | 0.0 | 680 |
MS.gene048741.t1 | AT2G01630 | 66.813 | 455 | 141 | 3 | 20 | 465 | 19 | 472 | 0.0 | 648 |
MS.gene048741.t1 | AT2G01630 | 68.571 | 420 | 132 | 0 | 20 | 439 | 19 | 438 | 0.0 | 631 |
MS.gene048741.t1 | AT2G01630 | 69.355 | 372 | 114 | 0 | 20 | 391 | 19 | 390 | 0.0 | 557 |
MS.gene048741.t1 | AT1G11820 | 56.552 | 435 | 189 | 0 | 19 | 453 | 39 | 473 | 0.0 | 538 |
MS.gene048741.t1 | AT1G11820 | 56.057 | 421 | 185 | 0 | 19 | 439 | 39 | 459 | 1.50e-180 | 514 |
MS.gene048741.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 2.77e-158 | 459 |
MS.gene048741.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 2.77e-158 | 459 |
MS.gene048741.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 2.77e-158 | 459 |
MS.gene048741.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 2.77e-158 | 459 |
MS.gene048741.t1 | AT3G13560 | 51.606 | 436 | 210 | 1 | 14 | 449 | 16 | 450 | 2.77e-158 | 459 |
MS.gene048741.t1 | AT1G11820 | 56.798 | 331 | 143 | 0 | 19 | 349 | 39 | 369 | 1.11e-136 | 399 |
MS.gene048741.t1 | AT2G05790 | 41.741 | 448 | 233 | 3 | 24 | 446 | 25 | 469 | 2.85e-121 | 363 |
MS.gene048741.t1 | AT4G26830 | 39.912 | 456 | 260 | 5 | 1 | 446 | 1 | 452 | 1.04e-115 | 348 |
MS.gene048741.t1 | AT4G26830 | 40.000 | 460 | 253 | 5 | 6 | 446 | 1 | 456 | 3.01e-115 | 347 |
MS.gene048741.t1 | AT4G29360 | 39.485 | 466 | 246 | 3 | 24 | 456 | 27 | 489 | 1.14e-114 | 348 |
MS.gene048741.t1 | AT4G29360 | 39.485 | 466 | 246 | 3 | 24 | 456 | 37 | 499 | 2.18e-114 | 348 |
MS.gene048741.t1 | AT5G55180 | 41.514 | 436 | 239 | 4 | 23 | 446 | 26 | 457 | 4.64e-114 | 344 |
MS.gene048741.t1 | AT5G56590 | 40.046 | 432 | 245 | 5 | 24 | 445 | 26 | 453 | 2.62e-111 | 339 |
MS.gene048741.t1 | AT5G55180 | 41.395 | 430 | 236 | 4 | 23 | 440 | 26 | 451 | 2.12e-110 | 335 |
MS.gene048741.t1 | AT4G34480 | 37.969 | 453 | 261 | 6 | 3 | 446 | 7 | 448 | 2.25e-96 | 300 |
MS.gene048741.t1 | AT2G16230 | 37.156 | 436 | 263 | 4 | 18 | 446 | 19 | 450 | 1.36e-94 | 296 |
MS.gene048741.t1 | AT3G23770 | 36.591 | 440 | 258 | 6 | 24 | 446 | 37 | 472 | 2.90e-94 | 294 |
MS.gene048741.t1 | AT5G24318 | 36.383 | 459 | 266 | 11 | 2 | 443 | 4 | 453 | 1.50e-91 | 286 |
MS.gene048741.t1 | AT3G07320 | 36.322 | 435 | 260 | 8 | 25 | 446 | 26 | 456 | 1.95e-91 | 286 |
MS.gene048741.t1 | AT5G24318 | 36.264 | 455 | 264 | 11 | 2 | 439 | 4 | 449 | 4.32e-89 | 280 |
MS.gene048741.t1 | AT4G14080 | 34.325 | 437 | 269 | 6 | 24 | 446 | 42 | 474 | 5.51e-89 | 280 |
MS.gene048741.t1 | AT3G55430 | 36.175 | 434 | 252 | 12 | 24 | 445 | 29 | 449 | 1.32e-80 | 258 |
MS.gene048741.t1 | AT3G15800 | 39.077 | 325 | 193 | 3 | 25 | 347 | 44 | 365 | 1.28e-74 | 241 |
MS.gene048741.t1 | AT2G26600 | 37.283 | 346 | 207 | 4 | 25 | 364 | 35 | 376 | 2.38e-71 | 232 |
MS.gene048741.t1 | AT4G18340 | 36.592 | 358 | 214 | 4 | 2 | 354 | 12 | 361 | 5.23e-71 | 231 |
MS.gene048741.t1 | AT4G18340 | 36.592 | 358 | 214 | 4 | 2 | 354 | 12 | 361 | 1.66e-70 | 230 |
MS.gene048741.t1 | AT2G39640 | 33.917 | 457 | 270 | 16 | 1 | 446 | 8 | 443 | 4.47e-69 | 230 |
MS.gene048741.t1 | AT2G39640 | 35.106 | 94 | 60 | 1 | 356 | 449 | 455 | 547 | 1.07e-15 | 80.1 |
MS.gene048741.t1 | AT4G34480 | 38.663 | 344 | 193 | 5 | 112 | 446 | 3 | 337 | 1.15e-68 | 225 |
MS.gene048741.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 24 | 347 | 29 | 350 | 3.29e-68 | 223 |
MS.gene048741.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 24 | 347 | 29 | 350 | 3.78e-68 | 224 |
MS.gene048741.t1 | AT5G42720 | 36.443 | 343 | 213 | 3 | 6 | 346 | 8 | 347 | 4.73e-68 | 225 |
MS.gene048741.t1 | AT1G32860 | 38.080 | 323 | 193 | 4 | 24 | 343 | 29 | 347 | 9.47e-68 | 224 |
MS.gene048741.t1 | AT4G16260 | 37.356 | 348 | 207 | 6 | 1 | 348 | 1 | 337 | 9.66e-68 | 221 |
MS.gene048741.t1 | AT4G34480 | 37.752 | 347 | 210 | 3 | 3 | 348 | 7 | 348 | 1.03e-67 | 221 |
MS.gene048741.t1 | AT5G42100 | 38.529 | 340 | 197 | 6 | 10 | 345 | 17 | 348 | 1.39e-67 | 223 |
MS.gene048741.t1 | AT5G42100 | 38.529 | 340 | 197 | 6 | 10 | 345 | 17 | 348 | 1.82e-67 | 223 |
MS.gene048741.t1 | AT5G24318 | 38.006 | 321 | 180 | 7 | 136 | 445 | 4 | 316 | 5.88e-67 | 218 |
MS.gene048741.t1 | AT3G61810 | 36.310 | 336 | 203 | 4 | 14 | 346 | 45 | 372 | 1.24e-66 | 219 |
MS.gene048741.t1 | AT1G30080 | 36.364 | 341 | 212 | 3 | 2 | 341 | 14 | 350 | 3.39e-66 | 218 |
MS.gene048741.t1 | AT5G24318 | 36.311 | 347 | 206 | 7 | 2 | 341 | 4 | 342 | 5.85e-66 | 217 |
MS.gene048741.t1 | AT1G30080 | 36.364 | 341 | 212 | 3 | 2 | 341 | 14 | 350 | 7.75e-66 | 218 |
MS.gene048741.t1 | AT3G57270 | 38.871 | 319 | 184 | 5 | 24 | 341 | 27 | 335 | 7.84e-65 | 213 |
MS.gene048741.t1 | AT4G16260 | 38.291 | 316 | 184 | 6 | 33 | 348 | 4 | 308 | 1.65e-64 | 212 |
MS.gene048741.t1 | AT5G58090 | 31.746 | 441 | 267 | 17 | 24 | 446 | 22 | 446 | 1.13e-59 | 204 |
MS.gene048741.t1 | AT3G57260 | 37.742 | 310 | 178 | 6 | 24 | 333 | 32 | 326 | 4.85e-59 | 198 |
MS.gene048741.t1 | AT3G24330 | 33.258 | 442 | 261 | 17 | 24 | 446 | 39 | 465 | 6.21e-59 | 202 |
MS.gene048741.t1 | AT3G57260 | 37.742 | 310 | 178 | 6 | 24 | 333 | 48 | 342 | 7.88e-59 | 198 |
MS.gene048741.t1 | AT4G31140 | 31.373 | 459 | 284 | 17 | 1 | 445 | 7 | 448 | 1.55e-58 | 201 |
MS.gene048741.t1 | AT2G27500 | 36.727 | 275 | 170 | 2 | 74 | 347 | 1 | 272 | 1.52e-56 | 191 |
MS.gene048741.t1 | AT5G18220 | 28.879 | 464 | 294 | 15 | 7 | 450 | 13 | 460 | 1.59e-56 | 196 |
MS.gene048741.t1 | AT3G04010 | 29.140 | 477 | 300 | 18 | 24 | 481 | 33 | 490 | 4.05e-56 | 194 |
MS.gene048741.t1 | AT5G20870 | 32.522 | 452 | 255 | 20 | 24 | 446 | 30 | 460 | 7.90e-55 | 191 |
MS.gene048741.t1 | AT2G26600 | 37.993 | 279 | 163 | 4 | 92 | 364 | 8 | 282 | 1.07e-54 | 185 |
MS.gene048741.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 5.37e-54 | 189 |
MS.gene048741.t1 | AT2G19440 | 31.222 | 442 | 268 | 17 | 24 | 446 | 21 | 445 | 5.37e-54 | 189 |
MS.gene048741.t1 | AT1G77780 | 32.258 | 341 | 218 | 7 | 3 | 341 | 1 | 330 | 1.27e-53 | 184 |
MS.gene048741.t1 | AT5G58480 | 31.637 | 452 | 280 | 14 | 24 | 462 | 26 | 461 | 7.99e-53 | 186 |
MS.gene048741.t1 | AT4G17180 | 31.749 | 463 | 262 | 18 | 8 | 445 | 7 | 440 | 5.40e-52 | 183 |
MS.gene048741.t1 | AT3G55780 | 34.700 | 317 | 198 | 7 | 38 | 351 | 49 | 359 | 1.09e-51 | 180 |
MS.gene048741.t1 | AT5G20340 | 34.769 | 325 | 193 | 8 | 24 | 343 | 43 | 353 | 1.17e-51 | 179 |
MS.gene048741.t1 | AT3G57240 | 35.604 | 323 | 190 | 8 | 24 | 345 | 35 | 340 | 6.27e-51 | 177 |
MS.gene048741.t1 | AT5G20330 | 34.877 | 324 | 194 | 7 | 24 | 343 | 34 | 344 | 8.29e-51 | 177 |
MS.gene048741.t1 | AT1G64760 | 30.248 | 443 | 271 | 18 | 24 | 446 | 25 | 449 | 1.73e-50 | 179 |
MS.gene048741.t1 | AT1G64760 | 30.248 | 443 | 271 | 18 | 24 | 446 | 25 | 449 | 1.73e-50 | 179 |
MS.gene048741.t1 | AT5G20390 | 33.537 | 328 | 193 | 8 | 24 | 343 | 33 | 343 | 1.85e-49 | 173 |
MS.gene048741.t1 | AT3G46570 | 36.842 | 323 | 190 | 9 | 24 | 341 | 27 | 340 | 2.65e-49 | 173 |
MS.gene048741.t1 | AT1G33220 | 33.117 | 308 | 191 | 5 | 24 | 328 | 34 | 329 | 1.41e-48 | 170 |
MS.gene048741.t1 | AT1G77790 | 32.174 | 345 | 219 | 8 | 1 | 343 | 10 | 341 | 1.08e-45 | 163 |
MS.gene048741.t1 | AT5G64790 | 27.335 | 439 | 289 | 15 | 24 | 446 | 28 | 452 | 2.21e-44 | 163 |
MS.gene048741.t1 | AT5G20560 | 33.333 | 315 | 193 | 6 | 24 | 334 | 34 | 335 | 1.06e-43 | 157 |
MS.gene048741.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 39 | 134 | 8.01e-26 | 104 |
MS.gene048741.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 359 | 454 | 115 | 210 | 2.43e-25 | 105 |
MS.gene048741.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 19 | 110 | 2.24e-24 | 99.0 |
MS.gene048741.t1 | AT1G66870 | 44.318 | 88 | 49 | 0 | 358 | 445 | 50 | 137 | 5.06e-24 | 97.8 |
MS.gene048741.t1 | AT1G66870 | 43.820 | 89 | 50 | 0 | 357 | 445 | 22 | 110 | 8.12e-24 | 96.3 |
MS.gene048741.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 357 | 448 | 44 | 135 | 1.10e-23 | 97.8 |
MS.gene048741.t1 | AT1G66852 | 46.067 | 89 | 47 | 1 | 357 | 445 | 22 | 109 | 2.59e-23 | 95.1 |
MS.gene048741.t1 | AT5G63240 | 45.263 | 95 | 49 | 2 | 353 | 445 | 33 | 126 | 1.66e-22 | 93.6 |
MS.gene048741.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 351 | 448 | 12 | 107 | 5.35e-22 | 92.0 |
MS.gene048741.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 351 | 448 | 12 | 107 | 1.16e-21 | 92.8 |
MS.gene048741.t1 | AT4G05430 | 45.783 | 83 | 45 | 0 | 357 | 439 | 44 | 126 | 1.22e-21 | 90.9 |
MS.gene048741.t1 | AT5G35740 | 39.785 | 93 | 55 | 1 | 354 | 445 | 23 | 115 | 2.47e-20 | 87.0 |
MS.gene048741.t1 | AT5G61130 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 5.29e-20 | 88.6 |
MS.gene048741.t1 | AT1G29380 | 44.444 | 90 | 49 | 1 | 361 | 450 | 148 | 236 | 6.33e-20 | 89.7 |
MS.gene048741.t1 | AT1G29380 | 44.706 | 85 | 46 | 1 | 361 | 445 | 148 | 231 | 1.80e-19 | 89.7 |
MS.gene048741.t1 | AT1G66855 | 40.909 | 88 | 52 | 0 | 358 | 445 | 23 | 110 | 2.09e-19 | 84.0 |
MS.gene048741.t1 | AT5G08000 | 46.067 | 89 | 47 | 1 | 358 | 446 | 37 | 124 | 2.42e-19 | 87.0 |
MS.gene048741.t1 | AT4G13600 | 41.573 | 89 | 51 | 1 | 361 | 449 | 61 | 148 | 5.76e-19 | 86.3 |
MS.gene048741.t1 | AT2G30933 | 43.333 | 90 | 50 | 1 | 359 | 448 | 80 | 168 | 6.03e-19 | 86.3 |
MS.gene048741.t1 | AT5G67460 | 23.698 | 384 | 217 | 11 | 79 | 445 | 53 | 377 | 1.90e-18 | 87.4 |
MS.gene048741.t1 | AT2G04910 | 42.353 | 85 | 49 | 0 | 361 | 445 | 15 | 99 | 2.13e-18 | 80.9 |
MS.gene048741.t1 | AT5G08000 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 3.20e-18 | 83.2 |
MS.gene048741.t1 | AT4G09462 | 32.710 | 107 | 71 | 1 | 339 | 445 | 7 | 112 | 4.61e-18 | 80.5 |
MS.gene048741.t1 | AT2G43670 | 37.895 | 95 | 57 | 1 | 351 | 445 | 25 | 117 | 4.80e-18 | 80.5 |
MS.gene048741.t1 | AT2G03505 | 40.426 | 94 | 53 | 2 | 360 | 451 | 20 | 112 | 5.83e-18 | 80.1 |
MS.gene048741.t1 | AT1G78520 | 39.560 | 91 | 53 | 1 | 355 | 445 | 26 | 114 | 6.53e-18 | 80.1 |
MS.gene048741.t1 | AT4G09467 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.82e-18 | 79.3 |
MS.gene048741.t1 | AT4G09464 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 9.82e-18 | 79.3 |
MS.gene048741.t1 | AT4G09465 | 36.782 | 87 | 54 | 1 | 359 | 445 | 29 | 114 | 1.40e-17 | 79.0 |
MS.gene048741.t1 | AT1G09460 | 44.944 | 89 | 46 | 2 | 357 | 445 | 133 | 218 | 2.31e-17 | 83.6 |
MS.gene048741.t1 | AT5G63250 | 40.230 | 87 | 50 | 1 | 361 | 445 | 42 | 128 | 3.78e-17 | 78.2 |
MS.gene048741.t1 | AT4G16165 | 33.019 | 106 | 68 | 1 | 340 | 445 | 8 | 110 | 3.97e-17 | 77.8 |
MS.gene048741.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 6.79e-17 | 80.5 |
MS.gene048741.t1 | AT1G29380 | 42.683 | 82 | 46 | 1 | 361 | 442 | 148 | 228 | 6.79e-17 | 80.5 |
MS.gene048741.t1 | AT4G09090 | 37.234 | 94 | 55 | 2 | 352 | 445 | 25 | 114 | 8.15e-17 | 77.0 |
MS.gene048741.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.09e-16 | 78.2 |
MS.gene048741.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.09e-16 | 78.2 |
MS.gene048741.t1 | AT2G03505 | 40.659 | 91 | 51 | 2 | 360 | 448 | 20 | 109 | 1.09e-16 | 78.2 |
MS.gene048741.t1 | AT5G67460 | 23.545 | 378 | 213 | 11 | 79 | 439 | 53 | 371 | 1.25e-16 | 82.0 |
MS.gene048741.t1 | AT5G63225 | 39.080 | 87 | 52 | 1 | 359 | 445 | 23 | 108 | 3.50e-16 | 74.7 |
MS.gene048741.t1 | AT2G04910 | 40.000 | 80 | 48 | 0 | 361 | 440 | 15 | 94 | 9.62e-16 | 73.9 |
MS.gene048741.t1 | AT4G09466 | 34.483 | 87 | 56 | 1 | 359 | 445 | 29 | 114 | 1.18e-15 | 73.6 |
MS.gene048741.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.56e-15 | 74.7 |
MS.gene048741.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 359 | 439 | 80 | 159 | 1.56e-15 | 74.7 |
MS.gene048741.t1 | AT5G63230 | 37.931 | 87 | 53 | 1 | 359 | 445 | 24 | 109 | 2.10e-15 | 72.8 |
MS.gene048741.t1 | AT5G53610 | 36.782 | 87 | 53 | 1 | 359 | 445 | 26 | 110 | 5.00e-15 | 71.6 |
MS.gene048741.t1 | AT5G53600 | 37.778 | 90 | 54 | 1 | 356 | 445 | 24 | 111 | 2.10e-14 | 69.7 |
MS.gene048741.t1 | AT1G13830 | 36.667 | 90 | 54 | 2 | 358 | 445 | 32 | 120 | 1.92e-12 | 67.0 |
MS.gene048741.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 21 | 100 | 2.91e-12 | 66.6 |
MS.gene048741.t1 | AT1G69295 | 40.244 | 82 | 47 | 2 | 361 | 442 | 17 | 96 | 3.26e-12 | 66.2 |
MS.gene048741.t1 | AT2G29735 | 32.584 | 89 | 57 | 2 | 359 | 445 | 29 | 116 | 4.44e-12 | 63.5 |
MS.gene048741.t1 | AT2G43660 | 30.000 | 110 | 74 | 1 | 339 | 445 | 9 | 118 | 7.41e-12 | 62.8 |
MS.gene048741.t1 | AT1G13830 | 36.782 | 87 | 52 | 2 | 361 | 445 | 21 | 106 | 9.22e-12 | 64.7 |
MS.gene048741.t1 | AT2G43660 | 33.721 | 86 | 57 | 0 | 360 | 445 | 34 | 119 | 1.83e-11 | 62.0 |
MS.gene048741.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 311 | 394 | 4.03e-11 | 65.1 |
MS.gene048741.t1 | AT1G79480 | 32.941 | 85 | 56 | 1 | 361 | 445 | 310 | 393 | 4.27e-11 | 65.1 |
Find 99 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAATTCCACAGCTTCAAAT+TGG | 0.180168 | 3.4:+66792555 | MS.gene048741:CDS |
TGCATTGCAGAACCATTTAT+TGG | 0.207713 | 3.4:+66792344 | MS.gene048741:intron |
CCCGGGGCGCTTTGGAGTTC+CGG | 0.235746 | 3.4:-66793185 | None:intergenic |
GATTCTTTGTTTGGTGGAAT+TGG | 0.284643 | 3.4:-66792947 | None:intergenic |
GACAGGTTCAGGTGCAGTTT+TGG | 0.297814 | 3.4:+66793327 | MS.gene048741:CDS |
ATTCCGGCCTGCAGCATCTT+TGG | 0.306131 | 3.4:-66793400 | None:intergenic |
CCAATGTTCACCCCAATAAA+TGG | 0.315368 | 3.4:-66792356 | None:intergenic |
ATTGCTAGAAGCTCTTCATT+AGG | 0.318741 | 3.4:-66792524 | None:intergenic |
TGTGATAGGACTTCTAATAT+TGG | 0.322418 | 3.4:+66794288 | MS.gene048741:CDS |
GCATTGCAGAACCATTTATT+GGG | 0.336407 | 3.4:+66792345 | MS.gene048741:intron |
GCATGAGCAACAACATTATC+AGG | 0.341654 | 3.4:-66793490 | None:intergenic |
GAATCAATAGATTCTTTGTT+TGG | 0.344151 | 3.4:-66792956 | None:intergenic |
AGTGTTGCATTAGGCTCATT+AGG | 0.359603 | 3.4:-66793109 | None:intergenic |
CACGGTTCTTGTATATTTCC+AGG | 0.363901 | 3.4:+66794073 | MS.gene048741:CDS |
TTGCTAGAAGCTCTTCATTA+GGG | 0.364621 | 3.4:-66792523 | None:intergenic |
CCCGTGGTGGTGACCGAAAC+CGG | 0.365853 | 3.4:+66793067 | MS.gene048741:CDS |
AAATGTGATGGTGCAGGGGC+AGG | 0.372606 | 3.4:-66794214 | None:intergenic |
CTCAAATGGTGTAATCCCTT+TGG | 0.373818 | 3.4:+66792907 | MS.gene048741:CDS |
AGAAGCCTTCTAATTGTGAT+AGG | 0.384591 | 3.4:+66794274 | MS.gene048741:CDS |
TGATGCTTATTATCATAAGA+TGG | 0.388926 | 3.4:+66793525 | MS.gene048741:CDS |
ACACCAATCCCGGGGCGCTT+TGG | 0.391176 | 3.4:-66793193 | None:intergenic |
TGCTGCAGGCCGGAATAGAT+TGG | 0.408046 | 3.4:+66793407 | MS.gene048741:CDS |
ATGTGATGGTGCAGGGGCAG+GGG | 0.412267 | 3.4:-66794212 | None:intergenic |
TCCACAAGCCCAATCTATTC+CGG | 0.415626 | 3.4:-66793416 | None:intergenic |
GGATTGTTCTCCATTGTTGC+AGG | 0.417343 | 3.4:+66793450 | MS.gene048741:CDS |
GTCAATTGCAAAACATAAAC+AGG | 0.426258 | 3.4:-66793307 | None:intergenic |
GAAGTCCTATCACAATTAGA+AGG | 0.426705 | 3.4:-66794279 | None:intergenic |
CTAACAGCACTATCAAAATC+AGG | 0.428623 | 3.4:+66792479 | MS.gene048741:CDS |
AATGAAGAGCTTCTAGCAAT+TGG | 0.431558 | 3.4:+66792527 | MS.gene048741:CDS |
AATGTGATGGTGCAGGGGCA+GGG | 0.433832 | 3.4:-66794213 | None:intergenic |
GAATCAAGTATGATGGTAGA+AGG | 0.444776 | 3.4:-66792758 | None:intergenic |
GAGTCCATGTAGTCATAGTA+AGG | 0.444995 | 3.4:-66792887 | None:intergenic |
TACAACGAGGACAAACAGCC+AGG | 0.445369 | 3.4:+66793238 | MS.gene048741:CDS |
TGATTCATTTCCACCTTCAC+AGG | 0.448300 | 3.4:+66792775 | MS.gene048741:CDS |
AAGCATGTGTTGAATAAAAC+CGG | 0.449451 | 3.4:+66793166 | MS.gene048741:CDS |
GCATTGACAAGTGTTGCATT+AGG | 0.454856 | 3.4:-66793118 | None:intergenic |
ATAGATTGGGCTTGTGGACC+TGG | 0.458565 | 3.4:+66793421 | MS.gene048741:CDS |
CCGGAACTCCAAAGCGCCCC+GGG | 0.463307 | 3.4:+66793185 | MS.gene048741:CDS |
ACTCCAAAGCGCCCCGGGAT+TGG | 0.468053 | 3.4:+66793190 | MS.gene048741:CDS |
ATAGTGCTGTTAGCATAGCT+TGG | 0.468643 | 3.4:-66792469 | None:intergenic |
GAATTCCACAGCTTCAAATT+GGG | 0.472855 | 3.4:+66792556 | MS.gene048741:CDS |
AGCAATCTGTGTTGGTTCTG+AGG | 0.477136 | 3.4:+66792622 | MS.gene048741:CDS |
GATGCTTATTATCATAAGAT+GGG | 0.483558 | 3.4:+66793526 | MS.gene048741:CDS |
CCGGTTTCGGTCACCACCAC+GGG | 0.484683 | 3.4:-66793067 | None:intergenic |
ATTCAGTGATGTGTTAAAGA+AGG | 0.489701 | 3.4:-66792798 | None:intergenic |
TATGACTACATGGACTCAAA+TGG | 0.493197 | 3.4:+66792893 | MS.gene048741:CDS |
CCATTTATTGGGGTGAACAT+TGG | 0.494081 | 3.4:+66792356 | MS.gene048741:CDS |
AGGACTTCTAATATTGGAAG+TGG | 0.502042 | 3.4:+66794294 | MS.gene048741:CDS |
ATTGCTGTGATATTTGTGTC+TGG | 0.511110 | 3.4:-66792605 | None:intergenic |
GCTGCAGGCCGGAATAGATT+GGG | 0.515672 | 3.4:+66793408 | MS.gene048741:CDS |
GCCGGAATAGATTGGGCTTG+TGG | 0.517366 | 3.4:+66793415 | MS.gene048741:CDS |
ACCGGAACTCCAAAGCGCCC+CGG | 0.518430 | 3.4:+66793184 | MS.gene048741:CDS |
TGGTGGTGACCGAAACCGGC+TGG | 0.522429 | 3.4:+66793071 | MS.gene048741:CDS |
TGGAAATGAATCAAGTATGA+TGG | 0.522752 | 3.4:-66792765 | None:intergenic |
TCAATAGATTCTTTGTTTGG+TGG | 0.525317 | 3.4:-66792953 | None:intergenic |
ATAAGTACTAACACCAATCC+CGG | 0.532396 | 3.4:-66793203 | None:intergenic |
TCTACTGTTGTGGCTGATGA+AGG | 0.533308 | 3.4:+66790998 | MS.gene048741:CDS |
GGCTTGTGGACCTGGAAAAG+TGG | 0.537036 | 3.4:+66793429 | MS.gene048741:CDS |
TGAAGAGTGCATAATCCAAA+GGG | 0.538133 | 3.4:-66792922 | None:intergenic |
TTACCCTTACTATGACTACA+TGG | 0.538605 | 3.4:+66792883 | MS.gene048741:CDS |
GTGAGGCATGTCTGAGAGAT+CGG | 0.540893 | 3.4:-66792381 | None:intergenic |
TGGGGACTATTTGATTCGAA+TGG | 0.540995 | 3.4:+66793280 | MS.gene048741:CDS |
TTGGGTTTCTCGCAATGTGT+TGG | 0.542236 | 3.4:+66792574 | MS.gene048741:CDS |
ACTTACTGTGTTGCTAAAGA+TGG | 0.553819 | 3.4:+66793370 | MS.gene048741:CDS |
GAAACCGGCTGGCCTTCAAA+AGG | 0.554209 | 3.4:+66793082 | MS.gene048741:CDS |
GATTGTTCTCCATTGTTGCA+GGG | 0.554686 | 3.4:+66793451 | MS.gene048741:CDS |
GTTCTTGTATATTTCCAGGA+AGG | 0.555329 | 3.4:+66794077 | MS.gene048741:CDS |
TGAGTAATGAAGAAGTGTGT+TGG | 0.555345 | 3.4:-66792978 | None:intergenic |
GATTGCAAGAAATCAAGCAT+TGG | 0.564353 | 3.4:-66792833 | None:intergenic |
AGAAACCCAATTTGAAGCTG+TGG | 0.569539 | 3.4:-66792561 | None:intergenic |
AGCAGTGCTACTACTTGAGT+AGG | 0.573355 | 3.4:-66792404 | None:intergenic |
GGTCACCACCACGGGAATGT+TGG | 0.573862 | 3.4:-66793059 | None:intergenic |
TAAGTACTAACACCAATCCC+GGG | 0.577513 | 3.4:-66793202 | None:intergenic |
TGACTTACTTGGATCTGAAG+TGG | 0.578075 | 3.4:-66793593 | None:intergenic |
GATCCAAAGATGCTGCAGGC+CGG | 0.581893 | 3.4:+66793397 | MS.gene048741:CDS |
ACCGGCTGGCCTTCAAAAGG+TGG | 0.585432 | 3.4:+66793085 | MS.gene048741:CDS |
TTGAAGAGTGCATAATCCAA+AGG | 0.590631 | 3.4:-66792923 | None:intergenic |
GATCAATATTCGATGCGACA+AGG | 0.591217 | 3.4:-66792709 | None:intergenic |
CATTGCAGAACCATTTATTG+GGG | 0.592068 | 3.4:+66792346 | MS.gene048741:intron |
TGCTGATCCAAAGATGCTGC+AGG | 0.594791 | 3.4:+66793393 | MS.gene048741:CDS |
GCCGGTTTCGGTCACCACCA+CGG | 0.596875 | 3.4:-66793068 | None:intergenic |
AATATCACAGCAATCTGTGT+TGG | 0.603144 | 3.4:+66792614 | MS.gene048741:CDS |
ATCAATATTCGATGCGACAA+GGG | 0.606226 | 3.4:-66792708 | None:intergenic |
TTAAAGAAGGCCTGTGAAGG+TGG | 0.612595 | 3.4:-66792785 | None:intergenic |
GCAGTGCTACTACTTGAGTA+GGG | 0.617916 | 3.4:-66792403 | None:intergenic |
GCTACTACTTGAGTAGGGTG+AGG | 0.620961 | 3.4:-66792398 | None:intergenic |
ACATTATCAGGATCATAGCA+TGG | 0.626154 | 3.4:-66793478 | None:intergenic |
AGTCCATGTAGTCATAGTAA+GGG | 0.626629 | 3.4:-66792886 | None:intergenic |
AAGCATGAGATAAGATTGAG+TGG | 0.629287 | 3.4:-66792855 | None:intergenic |
ACAACGAGGACAAACAGCCA+GGG | 0.633838 | 3.4:+66793239 | MS.gene048741:CDS |
GTCATGTAACTTCAATGACA+TGG | 0.644238 | 3.4:+66793561 | MS.gene048741:CDS |
AAGAAGAAAATGCATAACCA+TGG | 0.646101 | 3.4:-66790957 | None:intergenic |
AGTATGATGGTAGAAGGAAG+CGG | 0.649247 | 3.4:-66792752 | None:intergenic |
GTGTTAAAGAAGGCCTGTGA+AGG | 0.655577 | 3.4:-66792788 | None:intergenic |
CAACGAGGACAAACAGCCAG+GGG | 0.691863 | 3.4:+66793240 | MS.gene048741:CDS |
TTACACCAACATTCCCGTGG+TGG | 0.695713 | 3.4:+66793054 | MS.gene048741:CDS |
AAATTACACCAACATTCCCG+TGG | 0.711078 | 3.4:+66793051 | MS.gene048741:CDS |
AAGTACTAACACCAATCCCG+GGG | 0.721527 | 3.4:-66793201 | None:intergenic |
TATCTACGAGCTCTACAACG+AGG | 0.790392 | 3.4:+66793225 | MS.gene048741:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAATTCGATAAAAAA+AGG | + | chr3.4:66791228-66791247 | MS.gene048741:intron | 15.0% |
!! | AAGAAAATTCGATAAAAAAA+GGG | + | chr3.4:66791229-66791248 | MS.gene048741:intron | 15.0% |
!! | ATCTATTAAATATGATGATA+GGG | + | chr3.4:66791791-66791810 | MS.gene048741:intron | 15.0% |
!! | GTATCAAAATAAAACTATTT+AGG | - | chr3.4:66793808-66793827 | None:intergenic | 15.0% |
!!! | AATAAAACATGTTTATGTTT+TGG | + | chr3.4:66791106-66791125 | MS.gene048741:intron | 15.0% |
!!! | TTTTTGAGAATTTTTTAACT+CGG | + | chr3.4:66793723-66793742 | MS.gene048741:intron | 15.0% |
!! | AGAAAATTCGATAAAAAAAG+GGG | + | chr3.4:66791230-66791249 | MS.gene048741:intron | 20.0% |
!! | ATGTGAGTATTTGAAAAATA+TGG | - | chr3.4:66791974-66791993 | None:intergenic | 20.0% |
!! | CTAAAATAGCTCAAAAAAAT+TGG | + | chr3.4:66791610-66791629 | MS.gene048741:intron | 20.0% |
!! | GATCTATTAAATATGATGAT+AGG | + | chr3.4:66791790-66791809 | MS.gene048741:intron | 20.0% |
!! | TATTCTTGATAAATTATTGC+AGG | + | chr3.4:66791929-66791948 | MS.gene048741:intron | 20.0% |
!! | TATTTGAAAAATATGGTTGA+AGG | - | chr3.4:66791967-66791986 | None:intergenic | 20.0% |
!!! | TTCAAATATAGTCAAGTTTT+CGG | - | chr3.4:66792285-66792304 | None:intergenic | 20.0% |
!!! | TTTTGTTCTTAAATGTGTAA+AGG | + | chr3.4:66792058-66792077 | MS.gene048741:intron | 20.0% |
! | AAAATCCTACAAAAAAAGGT+GGG | - | chr3.4:66791304-66791323 | None:intergenic | 25.0% |
! | AAACATGCTTTCTAACAAAA+GGG | - | chr3.4:66791177-66791196 | None:intergenic | 25.0% |
! | AAGTAAAGTTGAAATGAAGA+TGG | + | chr3.4:66791706-66791725 | MS.gene048741:intron | 25.0% |
! | ACTAATGAAAGATACATTTG+AGG | - | chr3.4:66792191-66792210 | None:intergenic | 25.0% |
! | AGTAAAGTTGAAATGAAGAT+GGG | + | chr3.4:66791707-66791726 | MS.gene048741:intron | 25.0% |
! | ATCCAATTCATATGTATTGT+CGG | - | chr3.4:66793968-66793987 | None:intergenic | 25.0% |
! | CCAACAAGGAATAATATATA+TGG | - | chr3.4:66791048-66791067 | None:intergenic | 25.0% |
! | CCATATATATTATTCCTTGT+TGG | + | chr3.4:66791045-66791064 | MS.gene048741:intron | 25.0% |
! | GAATCAATAGATTCTTTGTT+TGG | - | chr3.4:66792959-66792978 | None:intergenic | 25.0% |
! | GATGCTTATTATCATAAGAT+GGG | + | chr3.4:66793526-66793545 | MS.gene048741:CDS | 25.0% |
! | TAAACATGCTTTCTAACAAA+AGG | - | chr3.4:66791178-66791197 | None:intergenic | 25.0% |
! | TATTAAATATGATGATAGGG+TGG | + | chr3.4:66791794-66791813 | MS.gene048741:intron | 25.0% |
! | TGATGCTTATTATCATAAGA+TGG | + | chr3.4:66793525-66793544 | MS.gene048741:CDS | 25.0% |
! | TTTCGTAATATCAAAGTGAA+AGG | - | chr3.4:66793619-66793638 | None:intergenic | 25.0% |
!! | AAAGTTTGAAACCCTAATTA+GGG | + | chr3.4:66791423-66791442 | MS.gene048741:intron | 25.0% |
!! | AATGATTTATCGATTGTGAT+TGG | + | chr3.4:66793918-66793937 | MS.gene048741:intron | 25.0% |
!! | AGATGCATTTATGTATGTTT+TGG | - | chr3.4:66792119-66792138 | None:intergenic | 25.0% |
!! | TTCTTTCTTTATTGCACTTT+TGG | - | chr3.4:66791667-66791686 | None:intergenic | 25.0% |
!!! | AAATTTTGGAGAAAATTGGT+AGG | + | chr3.4:66791551-66791570 | MS.gene048741:intron | 25.0% |
!!! | AATTTTGGAGAAAATTGGTA+GGG | + | chr3.4:66791552-66791571 | MS.gene048741:intron | 25.0% |
!!! | GTGTAAATTTTGGAGAAAAT+TGG | + | chr3.4:66791547-66791566 | MS.gene048741:intron | 25.0% |
AAATCCTACAAAAAAAGGTG+GGG | - | chr3.4:66791303-66791322 | None:intergenic | 30.0% | |
AACATGCTTTCTAACAAAAG+GGG | - | chr3.4:66791176-66791195 | None:intergenic | 30.0% | |
AACGATGTCAAGCATAAATT+TGG | - | chr3.4:66791373-66791392 | None:intergenic | 30.0% | |
AAGCATGTGTTGAATAAAAC+CGG | + | chr3.4:66793166-66793185 | MS.gene048741:CDS | 30.0% | |
AATAGATCTAAATACTGCAG+TGG | - | chr3.4:66791778-66791797 | None:intergenic | 30.0% | |
ACGATGTCAAGCATAAATTT+GGG | - | chr3.4:66791372-66791391 | None:intergenic | 30.0% | |
ACTACATATATCAAACTGTG+AGG | - | chr3.4:66791845-66791864 | None:intergenic | 30.0% | |
AGGATATTCTGAATGATTGT+AGG | + | chr3.4:66794049-66794068 | MS.gene048741:intron | 30.0% | |
ATTCAGTGATGTGTTAAAGA+AGG | - | chr3.4:66792801-66792820 | None:intergenic | 30.0% | |
CAAAATCCTACAAAAAAAGG+TGG | - | chr3.4:66791305-66791324 | None:intergenic | 30.0% | |
CACTTTGATATTACGAAAGA+GGG | + | chr3.4:66793621-66793640 | MS.gene048741:intron | 30.0% | |
CTACATATATCAAACTGTGA+GGG | - | chr3.4:66791844-66791863 | None:intergenic | 30.0% | |
GGTCAAAATCCTACAAAAAA+AGG | - | chr3.4:66791308-66791327 | None:intergenic | 30.0% | |
GTAAAGTTGAAATGAAGATG+GGG | + | chr3.4:66791708-66791727 | MS.gene048741:intron | 30.0% | |
GTCAATAAATTACACCATCT+CGG | + | chr3.4:66791525-66791544 | MS.gene048741:intron | 30.0% | |
GTCAATTGCAAAACATAAAC+AGG | - | chr3.4:66793310-66793329 | None:intergenic | 30.0% | |
TCACTTTGATATTACGAAAG+AGG | + | chr3.4:66793620-66793639 | MS.gene048741:intron | 30.0% | |
TCGGTAAAATATATGTAACG+AGG | - | chr3.4:66792266-66792285 | None:intergenic | 30.0% | |
TGGAAATGAATCAAGTATGA+TGG | - | chr3.4:66792768-66792787 | None:intergenic | 30.0% | |
TGTGATAGGACTTCTAATAT+TGG | + | chr3.4:66794288-66794307 | MS.gene048741:CDS | 30.0% | |
! | AAACTTTGAGAAAAGCTGTT+TGG | - | chr3.4:66791410-66791429 | None:intergenic | 30.0% |
! | AACTTTGAGAAAAGCTGTTT+GGG | - | chr3.4:66791409-66791428 | None:intergenic | 30.0% |
! | ACTAAGACTTTTGCTACATT+TGG | - | chr3.4:66792662-66792681 | None:intergenic | 30.0% |
! | CAAAGTTTGAAACCCTAATT+AGG | + | chr3.4:66791422-66791441 | MS.gene048741:intron | 30.0% |
! | CTAAGACTTTTGCTACATTT+GGG | - | chr3.4:66792661-66792680 | None:intergenic | 30.0% |
! | GTTTATGTTTTGCAATTGAC+AGG | + | chr3.4:66793310-66793329 | MS.gene048741:CDS | 30.0% |
! | TCAATAGATTCTTTGTTTGG+TGG | - | chr3.4:66792956-66792975 | None:intergenic | 30.0% |
! | TGCGTCTTTTATAGTTAGTT+TGG | + | chr3.4:66792164-66792183 | MS.gene048741:intron | 30.0% |
!! | ATTTTGGAGAAAATTGGTAG+GGG | + | chr3.4:66791553-66791572 | MS.gene048741:intron | 30.0% |
!! | GAAAAATGTTTTTACCTTCC+TGG | - | chr3.4:66794094-66794113 | None:intergenic | 30.0% |
!!! | CATGTTTATGTTTTGGTGTT+TGG | + | chr3.4:66791113-66791132 | MS.gene048741:intron | 30.0% |
!!! | GTTTTGGCTAATGATACAAA+AGG | + | chr3.4:66793343-66793362 | MS.gene048741:CDS | 30.0% |
!!! | TCAGAAAAGCTTACTTTTTG+AGG | + | chr3.4:66791896-66791915 | MS.gene048741:intron | 30.0% |
AAAGTGAAAGGTGACTTACT+TGG | - | chr3.4:66793607-66793626 | None:intergenic | 35.0% | |
AAGCATGAGATAAGATTGAG+TGG | - | chr3.4:66792858-66792877 | None:intergenic | 35.0% | |
AATATCACAGCAATCTGTGT+TGG | + | chr3.4:66792614-66792633 | MS.gene048741:CDS | 35.0% | |
AATCGCACAATTGTGATACT+TGG | + | chr3.4:66791639-66791658 | MS.gene048741:intron | 35.0% | |
AATGAAGAGCTTCTAGCAAT+TGG | + | chr3.4:66792527-66792546 | MS.gene048741:CDS | 35.0% | |
AATTAGGGATTTCGCTTTCA+TGG | + | chr3.4:66791438-66791457 | MS.gene048741:intron | 35.0% | |
ACAGAAAAAACACACCAACA+AGG | - | chr3.4:66791062-66791081 | None:intergenic | 35.0% | |
ACATTATCAGGATCATAGCA+TGG | - | chr3.4:66793481-66793500 | None:intergenic | 35.0% | |
ACGCTTGTAAGCGAAAATAT+TGG | - | chr3.4:66794154-66794173 | None:intergenic | 35.0% | |
AGAAGCCTTCTAATTGTGAT+AGG | + | chr3.4:66794274-66794293 | MS.gene048741:CDS | 35.0% | |
AGGACTTCTAATATTGGAAG+TGG | + | chr3.4:66794294-66794313 | MS.gene048741:CDS | 35.0% | |
AGGGGACTACAAAATTACAA+AGG | + | chr3.4:66791571-66791590 | MS.gene048741:intron | 35.0% | |
AGTCCATGTAGTCATAGTAA+GGG | - | chr3.4:66792889-66792908 | None:intergenic | 35.0% | |
ATAAGTACTAACACCAATCC+CGG | - | chr3.4:66793206-66793225 | None:intergenic | 35.0% | |
ATCAATATTCGATGCGACAA+GGG | - | chr3.4:66792711-66792730 | None:intergenic | 35.0% | |
ATCACGAAGAGAAAAACACT+AGG | - | chr3.4:66791330-66791349 | None:intergenic | 35.0% | |
ATCGCACAATTGTGATACTT+GGG | + | chr3.4:66791640-66791659 | MS.gene048741:intron | 35.0% | |
ATTAGGGATTTCGCTTTCAT+GGG | + | chr3.4:66791439-66791458 | MS.gene048741:intron | 35.0% | |
ATTGCTAGAAGCTCTTCATT+AGG | - | chr3.4:66792527-66792546 | None:intergenic | 35.0% | |
ATTGCTGTGATATTTGTGTC+TGG | - | chr3.4:66792608-66792627 | None:intergenic | 35.0% | |
CATTGCAGAACCATTTATTG+GGG | + | chr3.4:66792346-66792365 | MS.gene048741:intron | 35.0% | |
CGATGTCAAGCATAAATTTG+GGG | - | chr3.4:66791371-66791390 | None:intergenic | 35.0% | |
CGTTACTACTTTCAAAGTCA+CGG | - | chr3.4:66793880-66793899 | None:intergenic | 35.0% | |
CTAACAGCACTATCAAAATC+AGG | + | chr3.4:66792479-66792498 | MS.gene048741:CDS | 35.0% | |
CTAGTATCATAGTCTGACTA+AGG | + | chr3.4:66794029-66794048 | MS.gene048741:intron | 35.0% | |
CTCCGACAATACATATGAAT+TGG | + | chr3.4:66793963-66793982 | MS.gene048741:intron | 35.0% | |
GAAAGCGAAATCCCTAATTA+GGG | - | chr3.4:66791437-66791456 | None:intergenic | 35.0% | |
GAAGTCCTATCACAATTAGA+AGG | - | chr3.4:66794282-66794301 | None:intergenic | 35.0% | |
GAATCAAGTATGATGGTAGA+AGG | - | chr3.4:66792761-66792780 | None:intergenic | 35.0% | |
GAATTCCACAGCTTCAAATT+GGG | + | chr3.4:66792556-66792575 | MS.gene048741:CDS | 35.0% | |
GATGTCAAGCATAAATTTGG+GGG | - | chr3.4:66791370-66791389 | None:intergenic | 35.0% | |
GATTGCAAGAAATCAAGCAT+TGG | - | chr3.4:66792836-66792855 | None:intergenic | 35.0% | |
GCATCTTTCGTTAGTCAATT+TGG | + | chr3.4:66792133-66792152 | MS.gene048741:intron | 35.0% | |
GCATTGCAGAACCATTTATT+GGG | + | chr3.4:66792345-66792364 | MS.gene048741:intron | 35.0% | |
GCATTGTCAGAGAAAAATTG+GGG | + | chr3.4:66793262-66793281 | MS.gene048741:CDS | 35.0% | |
GGCATTGTCAGAGAAAAATT+GGG | + | chr3.4:66793261-66793280 | MS.gene048741:CDS | 35.0% | |
GGGACTACAAAATTACAAAG+GGG | + | chr3.4:66791573-66791592 | MS.gene048741:intron | 35.0% | |
GGGGACTACAAAATTACAAA+GGG | + | chr3.4:66791572-66791591 | MS.gene048741:intron | 35.0% | |
GTCATGTAACTTCAATGACA+TGG | + | chr3.4:66793561-66793580 | MS.gene048741:CDS | 35.0% | |
GTTCTTGTATATTTCCAGGA+AGG | + | chr3.4:66794077-66794096 | MS.gene048741:CDS | 35.0% | |
TATGACTACATGGACTCAAA+TGG | + | chr3.4:66792893-66792912 | MS.gene048741:CDS | 35.0% | |
TCACGAAGAGAAAAACACTA+GGG | - | chr3.4:66791329-66791348 | None:intergenic | 35.0% | |
TGAAAGCGAAATCCCTAATT+AGG | - | chr3.4:66791438-66791457 | None:intergenic | 35.0% | |
TGCATTGCAGAACCATTTAT+TGG | + | chr3.4:66792344-66792363 | MS.gene048741:intron | 35.0% | |
TGGTGTTTGGATATTGCATT+AGG | + | chr3.4:66791126-66791145 | MS.gene048741:intron | 35.0% | |
TTACCCTTACTATGACTACA+TGG | + | chr3.4:66792883-66792902 | MS.gene048741:CDS | 35.0% | |
TTCTGAATGATTGTAGGTCA+CGG | + | chr3.4:66794055-66794074 | MS.gene048741:intron | 35.0% | |
TTGCTAGAAGCTCTTCATTA+GGG | - | chr3.4:66792526-66792545 | None:intergenic | 35.0% | |
TTTAGGCAAAATTGCACTTG+CGG | - | chr3.4:66793791-66793810 | None:intergenic | 35.0% | |
! | AAAGGGGTTCATTGTGTTTT+TGG | + | chr3.4:66791246-66791265 | MS.gene048741:intron | 35.0% |
! | ACTTACTGTGTTGCTAAAGA+TGG | + | chr3.4:66793370-66793389 | MS.gene048741:CDS | 35.0% |
! | ATAAATGGTTCTGCAATGCA+AGG | - | chr3.4:66792344-66792363 | None:intergenic | 35.0% |
! | GATTCTTTGTTTGGTGGAAT+TGG | - | chr3.4:66792950-66792969 | None:intergenic | 35.0% |
! | TGAAGAGTGCATAATCCAAA+GGG | - | chr3.4:66792925-66792944 | None:intergenic | 35.0% |
! | TGAGTAATGAAGAAGTGTGT+TGG | - | chr3.4:66792981-66793000 | None:intergenic | 35.0% |
! | TTGAAGAGTGCATAATCCAA+AGG | - | chr3.4:66792926-66792945 | None:intergenic | 35.0% |
! | TTTTGCAGTATCTACTGTTG+TGG | + | chr3.4:66790988-66791007 | MS.gene048741:CDS | 35.0% |
! | TTTTGCTACATTTGGGAGTA+TGG | - | chr3.4:66792654-66792673 | None:intergenic | 35.0% |
!! | CGGTCACATTAGTGTTTTTA+AGG | + | chr3.4:66793743-66793762 | MS.gene048741:intron | 35.0% |
AAATTACACCAACATTCCCG+TGG | + | chr3.4:66793051-66793070 | MS.gene048741:CDS | 40.0% | |
AGTATGATGGTAGAAGGAAG+CGG | - | chr3.4:66792755-66792774 | None:intergenic | 40.0% | |
AGTGTTGCATTAGGCTCATT+AGG | - | chr3.4:66793112-66793131 | None:intergenic | 40.0% | |
ATTCAGCGTCTCACACATTT+GGG | + | chr3.4:66792223-66792242 | MS.gene048741:intron | 40.0% | |
CACGGTTCTTGTATATTTCC+AGG | + | chr3.4:66794073-66794092 | MS.gene048741:CDS | 40.0% | |
CCAATGTTCACCCCAATAAA+TGG | - | chr3.4:66792359-66792378 | None:intergenic | 40.0% | |
CCATTTATTGGGGTGAACAT+TGG | + | chr3.4:66792356-66792375 | MS.gene048741:CDS | 40.0% | |
CGAATTCCACAGCTTCAAAT+TGG | + | chr3.4:66792555-66792574 | MS.gene048741:CDS | 40.0% | |
CTCAAATGGTGTAATCCCTT+TGG | + | chr3.4:66792907-66792926 | MS.gene048741:CDS | 40.0% | |
CTCCAAAATTTACACCGAGA+TGG | - | chr3.4:66791542-66791561 | None:intergenic | 40.0% | |
GACTTTCTTGAATAGCACTG+AGG | + | chr3.4:66791751-66791770 | MS.gene048741:intron | 40.0% | |
GAGTCCATGTAGTCATAGTA+AGG | - | chr3.4:66792890-66792909 | None:intergenic | 40.0% | |
GATCAATATTCGATGCGACA+AGG | - | chr3.4:66792712-66792731 | None:intergenic | 40.0% | |
GATTGTTCTCCATTGTTGCA+GGG | + | chr3.4:66793451-66793470 | MS.gene048741:CDS | 40.0% | |
GCATGAGCAACAACATTATC+AGG | - | chr3.4:66793493-66793512 | None:intergenic | 40.0% | |
TAAGTACTAACACCAATCCC+GGG | - | chr3.4:66793205-66793224 | None:intergenic | 40.0% | |
TACAAAGGGGAAAAACACGA+GGG | + | chr3.4:66791586-66791605 | MS.gene048741:intron | 40.0% | |
TCGCACAATTGTGATACTTG+GGG | + | chr3.4:66791641-66791660 | MS.gene048741:intron | 40.0% | |
TGACTTACTTGGATCTGAAG+TGG | - | chr3.4:66793596-66793615 | None:intergenic | 40.0% | |
TGATTCATTTCCACCTTCAC+AGG | + | chr3.4:66792775-66792794 | MS.gene048741:CDS | 40.0% | |
TTACAAAGGGGAAAAACACG+AGG | + | chr3.4:66791585-66791604 | MS.gene048741:intron | 40.0% | |
TTGCACCCAGAAAAATGTGA+TGG | - | chr3.4:66794229-66794248 | None:intergenic | 40.0% | |
TTTGTGGTTATGTGCAGTCT+CGG | + | chr3.4:66794178-66794197 | MS.gene048741:intron | 40.0% | |
! | AGAAAAATGTGATGGTGCAG+GGG | - | chr3.4:66794221-66794240 | None:intergenic | 40.0% |
! | AGAAACCCAATTTGAAGCTG+TGG | - | chr3.4:66792564-66792583 | None:intergenic | 40.0% |
! | ATAGTGCTGTTAGCATAGCT+TGG | - | chr3.4:66792472-66792491 | None:intergenic | 40.0% |
! | CAGAAAAATGTGATGGTGCA+GGG | - | chr3.4:66794222-66794241 | None:intergenic | 40.0% |
! | CTGCACCATCACATTTTTCT+GGG | + | chr3.4:66794221-66794240 | MS.gene048741:CDS | 40.0% |
! | GCATTGACAAGTGTTGCATT+AGG | - | chr3.4:66793121-66793140 | None:intergenic | 40.0% |
! | GCTTGATCGTTTTCCAGTAT+TGG | + | chr3.4:66793669-66793688 | MS.gene048741:intron | 40.0% |
! | GGGCATTGTCAGAGAAAAAT+TGG | + | chr3.4:66793260-66793279 | MS.gene048741:CDS | 40.0% |
! | GTTTTGCAATTGACAGGTTC+AGG | + | chr3.4:66793316-66793335 | MS.gene048741:CDS | 40.0% |
! | TCATTAGGACCACCTTTTGA+AGG | - | chr3.4:66793097-66793116 | None:intergenic | 40.0% |
! | TGGGGACTATTTGATTCGAA+TGG | + | chr3.4:66793280-66793299 | MS.gene048741:CDS | 40.0% |
!! | CACCATCTCGGTGTAAATTT+TGG | + | chr3.4:66791537-66791556 | MS.gene048741:intron | 40.0% |
!! | GCTTACAAGCGTTTGATTTG+TGG | + | chr3.4:66794162-66794181 | MS.gene048741:intron | 40.0% |
!!! | CGCTTTCATGGGTGATTTTT+TGG | + | chr3.4:66791450-66791469 | MS.gene048741:intron | 40.0% |
!!! | TTAGCCCCACCTTTTTTTGT+AGG | + | chr3.4:66791296-66791315 | MS.gene048741:intron | 40.0% |
AAGTACTAACACCAATCCCG+GGG | - | chr3.4:66793204-66793223 | None:intergenic | 45.0% | |
ACAAAGGGGAAAAACACGAG+GGG | + | chr3.4:66791587-66791606 | MS.gene048741:intron | 45.0% | |
ACACAATCGCGATACTTGAG+GGG | - | chr3.4:66791272-66791291 | None:intergenic | 45.0% | |
CACACAATCGCGATACTTGA+GGG | - | chr3.4:66791273-66791292 | None:intergenic | 45.0% | |
CATTCAGCGTCTCACACATT+TGG | + | chr3.4:66792222-66792241 | MS.gene048741:intron | 45.0% | |
GAAATGAAGATGGGGCAGAT+AGG | + | chr3.4:66791716-66791735 | MS.gene048741:intron | 45.0% | |
GAGACTTCAAGGACCAATAC+TGG | - | chr3.4:66793685-66793704 | None:intergenic | 45.0% | |
GGATACATTGACGTACCTGA+AGG | + | chr3.4:66793764-66793783 | MS.gene048741:intron | 45.0% | |
GGATTGTTCTCCATTGTTGC+AGG | + | chr3.4:66793450-66793469 | MS.gene048741:CDS | 45.0% | |
GTGTTAAAGAAGGCCTGTGA+AGG | - | chr3.4:66792791-66792810 | None:intergenic | 45.0% | |
TATCTACGAGCTCTACAACG+AGG | + | chr3.4:66793225-66793244 | MS.gene048741:CDS | 45.0% | |
TCACACAATCGCGATACTTG+AGG | - | chr3.4:66791274-66791293 | None:intergenic | 45.0% | |
TCCACAAGCCCAATCTATTC+CGG | - | chr3.4:66793419-66793438 | None:intergenic | 45.0% | |
TCTACTGTTGTGGCTGATGA+AGG | + | chr3.4:66790998-66791017 | MS.gene048741:CDS | 45.0% | |
TTAAAGAAGGCCTGTGAAGG+TGG | - | chr3.4:66792788-66792807 | None:intergenic | 45.0% | |
TTCAGCGTCTCACACATTTG+GGG | + | chr3.4:66792224-66792243 | MS.gene048741:intron | 45.0% | |
TTGGGTTTCTCGCAATGTGT+TGG | + | chr3.4:66792574-66792593 | MS.gene048741:CDS | 45.0% | |
! | AGCAGTGCTACTACTTGAGT+AGG | - | chr3.4:66792407-66792426 | None:intergenic | 45.0% |
! | CATGGTTTTCCCTGCAACAA+TGG | - | chr3.4:66793463-66793482 | None:intergenic | 45.0% |
! | CCAGAAAAATGTGATGGTGC+AGG | - | chr3.4:66794223-66794242 | None:intergenic | 45.0% |
! | CCTGCACCATCACATTTTTC+TGG | + | chr3.4:66794220-66794239 | MS.gene048741:CDS | 45.0% |
! | GCAGTGCTACTACTTGAGTA+GGG | - | chr3.4:66792406-66792425 | None:intergenic | 45.0% |
! | TTTTTCTCTGACAATGCCCC+TGG | - | chr3.4:66793259-66793278 | None:intergenic | 45.0% |
!! | AGCAATCTGTGTTGGTTCTG+AGG | + | chr3.4:66792622-66792641 | MS.gene048741:CDS | 45.0% |
!! | GGAGAACAATCCACTTTTCC+AGG | - | chr3.4:66793442-66793461 | None:intergenic | 45.0% |
!!! | GTGCACGTTTTGAGACTTCA+AGG | - | chr3.4:66793696-66793715 | None:intergenic | 45.0% |
AATTGCACTTGCGGTCCTTC+AGG | - | chr3.4:66793782-66793801 | None:intergenic | 50.0% | |
ACAACGAGGACAAACAGCCA+GGG | + | chr3.4:66793239-66793258 | MS.gene048741:CDS | 50.0% | |
ATAGATTGGGCTTGTGGACC+TGG | + | chr3.4:66793421-66793440 | MS.gene048741:CDS | 50.0% | |
GCTACTACTTGAGTAGGGTG+AGG | - | chr3.4:66792401-66792420 | None:intergenic | 50.0% | |
GTGAGGCATGTCTGAGAGAT+CGG | - | chr3.4:66792384-66792403 | None:intergenic | 50.0% | |
TACAACGAGGACAAACAGCC+AGG | + | chr3.4:66793238-66793257 | MS.gene048741:CDS | 50.0% | |
TGCTGATCCAAAGATGCTGC+AGG | + | chr3.4:66793393-66793412 | MS.gene048741:CDS | 50.0% | |
TTACACCAACATTCCCGTGG+TGG | + | chr3.4:66793054-66793073 | MS.gene048741:CDS | 50.0% | |
! | GACAGGTTCAGGTGCAGTTT+TGG | + | chr3.4:66793327-66793346 | MS.gene048741:CDS | 50.0% |
!! | TTTTGAAGGCCAGCCGGTTT+CGG | - | chr3.4:66793083-66793102 | None:intergenic | 50.0% |
ATTCCGGCCTGCAGCATCTT+TGG | - | chr3.4:66793403-66793422 | None:intergenic | 55.0% | |
CAACGAGGACAAACAGCCAG+GGG | + | chr3.4:66793240-66793259 | MS.gene048741:CDS | 55.0% | |
GATCCAAAGATGCTGCAGGC+CGG | + | chr3.4:66793397-66793416 | MS.gene048741:CDS | 55.0% | |
GCCGGAATAGATTGGGCTTG+TGG | + | chr3.4:66793415-66793434 | MS.gene048741:CDS | 55.0% | |
GCTGCAGGCCGGAATAGATT+GGG | + | chr3.4:66793408-66793427 | MS.gene048741:CDS | 55.0% | |
GGCTTGTGGACCTGGAAAAG+TGG | + | chr3.4:66793429-66793448 | MS.gene048741:CDS | 55.0% | |
TGCTGCAGGCCGGAATAGAT+TGG | + | chr3.4:66793407-66793426 | MS.gene048741:CDS | 55.0% | |
! | AAATGTGATGGTGCAGGGGC+AGG | - | chr3.4:66794217-66794236 | None:intergenic | 55.0% |
! | AATGTGATGGTGCAGGGGCA+GGG | - | chr3.4:66794216-66794235 | None:intergenic | 55.0% |
!! | ACCACCTTTTGAAGGCCAGC+CGG | - | chr3.4:66793089-66793108 | None:intergenic | 55.0% |
!! | GAAACCGGCTGGCCTTCAAA+AGG | + | chr3.4:66793082-66793101 | MS.gene048741:CDS | 55.0% |
GGTCACCACCACGGGAATGT+TGG | - | chr3.4:66793062-66793081 | None:intergenic | 60.0% | |
! | ATGTGATGGTGCAGGGGCAG+GGG | - | chr3.4:66794215-66794234 | None:intergenic | 60.0% |
!! | ACCGGCTGGCCTTCAAAAGG+TGG | + | chr3.4:66793085-66793104 | MS.gene048741:CDS | 60.0% |
CCGGTTTCGGTCACCACCAC+GGG | - | chr3.4:66793070-66793089 | None:intergenic | 65.0% | |
! | ACACCAATCCCGGGGCGCTT+TGG | - | chr3.4:66793196-66793215 | None:intergenic | 65.0% |
! | ACCGGAACTCCAAAGCGCCC+CGG | + | chr3.4:66793184-66793203 | MS.gene048741:CDS | 65.0% |
! | ACTCCAAAGCGCCCCGGGAT+TGG | + | chr3.4:66793190-66793209 | MS.gene048741:CDS | 65.0% |
! | CCCGTGGTGGTGACCGAAAC+CGG | + | chr3.4:66793067-66793086 | MS.gene048741:CDS | 65.0% |
! | GCCGGTTTCGGTCACCACCA+CGG | - | chr3.4:66793071-66793090 | None:intergenic | 65.0% |
! | TGGTGGTGACCGAAACCGGC+TGG | + | chr3.4:66793071-66793090 | MS.gene048741:CDS | 65.0% |
! | CCGGAACTCCAAAGCGCCCC+GGG | + | chr3.4:66793185-66793204 | MS.gene048741:CDS | 70.0% |
!! | CCCGGGGCGCTTTGGAGTTC+CGG | - | chr3.4:66793188-66793207 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 66790959 | 66794327 | 66790959 | ID=MS.gene048741 |
chr3.4 | mRNA | 66790959 | 66794327 | 66790959 | ID=MS.gene048741.t1;Parent=MS.gene048741 |
chr3.4 | exon | 66790959 | 66791019 | 66790959 | ID=MS.gene048741.t1.exon1;Parent=MS.gene048741.t1 |
chr3.4 | CDS | 66790959 | 66791019 | 66790959 | ID=cds.MS.gene048741.t1;Parent=MS.gene048741.t1 |
chr3.4 | exon | 66792354 | 66793607 | 66792354 | ID=MS.gene048741.t1.exon2;Parent=MS.gene048741.t1 |
chr3.4 | CDS | 66792354 | 66793607 | 66792354 | ID=cds.MS.gene048741.t1;Parent=MS.gene048741.t1 |
chr3.4 | exon | 66794071 | 66794098 | 66794071 | ID=MS.gene048741.t1.exon3;Parent=MS.gene048741.t1 |
chr3.4 | CDS | 66794071 | 66794098 | 66794071 | ID=cds.MS.gene048741.t1;Parent=MS.gene048741.t1 |
chr3.4 | exon | 66794195 | 66794327 | 66794195 | ID=MS.gene048741.t1.exon4;Parent=MS.gene048741.t1 |
chr3.4 | CDS | 66794195 | 66794327 | 66794195 | ID=cds.MS.gene048741.t1;Parent=MS.gene048741.t1 |
Gene Sequence |
Protein sequence |