Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049145.t1 | XP_013447342.1 | 64 | 389 | 78 | 7 | 1 | 345 | 1 | 371 | 1.30E-123 | 453 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049145.t1 | Q8RXA7 | 51.1 | 378 | 144 | 8 | 1 | 345 | 1 | 370 | 1.6e-90 | 334.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049145.t1 | A0A072TV61 | 64.0 | 389 | 78 | 7 | 1 | 345 | 1 | 371 | 9.1e-124 | 453.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049145 | MS.gene063176 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene049145 | MS.gene26731 | 0.817226 | 3.68E-52 | -1.69E-46 |
| MS.gene049145 | MS.gene28612 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene049145 | MS.gene33526 | 0.821723 | 3.47E-53 | -1.69E-46 |
| MS.gene049145 | MS.gene61873 | 0.800411 | 1.46E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049145.t1 | MTR_8g104010 | 63.990 | 386 | 83 | 6 | 1 | 345 | 1 | 371 | 7.72e-141 | 429 |
| MS.gene049145.t1 | MTR_8g104010 | 98.901 | 91 | 1 | 0 | 255 | 345 | 1 | 91 | 4.00e-54 | 191 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049145.t1 | AT1G49040 | 50.639 | 391 | 126 | 11 | 1 | 345 | 1 | 370 | 8.01e-99 | 312 |
| MS.gene049145.t1 | AT1G49040 | 50.639 | 391 | 126 | 11 | 1 | 345 | 1 | 370 | 8.01e-99 | 312 |
| MS.gene049145.t1 | AT1G49040 | 50.639 | 391 | 126 | 11 | 1 | 345 | 1 | 370 | 3.16e-98 | 313 |
| MS.gene049145.t1 | AT1G49040 | 50.639 | 391 | 126 | 11 | 1 | 345 | 1 | 370 | 1.88e-97 | 313 |
Find 103 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTACATCCCAACGTAAT+TGG | 0.225939 | 4.4:+2705510 | MS.gene049145:CDS |
| GCAATAGAAGCTGTAGAAAT+AGG | 0.244433 | 4.4:+2701887 | MS.gene049145:CDS |
| GGTGTTGAGTTCCATGCTTC+AGG | 0.272181 | 4.4:+2701054 | MS.gene049145:CDS |
| GCAATCAGTCATAACATTAA+AGG | 0.312802 | 4.4:-2703757 | None:intergenic |
| AACAGAACTCGCTCCTTTCC+AGG | 0.317466 | 4.4:-2702850 | None:intergenic |
| GTAGCCTTTGTTTCCATCAA+TGG | 0.340755 | 4.4:-2700845 | None:intergenic |
| CCATTGCTTAGCACTAAGTT+TGG | 0.344474 | 4.4:-2705580 | None:intergenic |
| GAATGAAGTCCCATCATATA+TGG | 0.351168 | 4.4:-2704103 | None:intergenic |
| TATATGATGGGACTTCATTC+AGG | 0.362663 | 4.4:+2704106 | MS.gene049145:CDS |
| TACTTCGTTGTATGCGGAAT+CGG | 0.376277 | 4.4:+2700808 | MS.gene049145:CDS |
| CTTAATTCTGGCTCAGGAAT+AGG | 0.384374 | 4.4:-2705462 | None:intergenic |
| GGAAGCTGAGGAGGTGGAGG+AGG | 0.386527 | 4.4:-2700937 | None:intergenic |
| GGATAGAGAGAGTGAGTAGA+AGG | 0.391615 | 4.4:-2700916 | None:intergenic |
| GTTCTATGTTTCTCCCCAAC+TGG | 0.401299 | 4.4:+2702420 | MS.gene049145:CDS |
| TTGATTGTAGTGTGTTCTTC+CGG | 0.410835 | 4.4:+2701029 | MS.gene049145:intron |
| CCATCAATGGATCGAATCTC+AGG | 0.413858 | 4.4:-2700832 | None:intergenic |
| CATTGCTTAGCACTAAGTTT+GGG | 0.415456 | 4.4:-2705579 | None:intergenic |
| TTCACTTCTGTACTCCAGTC+TGG | 0.418429 | 4.4:+2703699 | MS.gene049145:CDS |
| ACACTTACCTACTTCCAGTT+GGG | 0.421558 | 4.4:-2702434 | None:intergenic |
| GGAAATTGATCGAGAAGAAA+AGG | 0.439027 | 4.4:-2700892 | None:intergenic |
| CCTGAGATTCGATCCATTGA+TGG | 0.439225 | 4.4:+2700832 | MS.gene049145:CDS |
| CAAACTTAGTGCTAAGCAAT+GGG | 0.449164 | 4.4:+2705581 | MS.gene049145:CDS |
| GGCATGAACAAAGCTTATCC+TGG | 0.453159 | 4.4:+2701908 | MS.gene049145:CDS |
| AGCATACCGGTCAAAACAAT+AGG | 0.455811 | 4.4:-2701117 | None:intergenic |
| TGCTCCTACACCATATATGA+TGG | 0.467981 | 4.4:+2704093 | MS.gene049145:CDS |
| TAGAGAGAGTGAGTAGAAGG+TGG | 0.471027 | 4.4:-2700913 | None:intergenic |
| TCATCAATTCCAATTACGTT+GGG | 0.473388 | 4.4:-2705519 | None:intergenic |
| GGGGAAGTCCACAGTTTGGT+GGG | 0.476300 | 4.4:-2702906 | None:intergenic |
| AATGTACCTTTGCCTACTCC+TGG | 0.479501 | 4.4:+2702832 | MS.gene049145:CDS |
| ACATGGGGAAGTCCACAGTT+TGG | 0.485287 | 4.4:-2702910 | None:intergenic |
| GAATTGTCTGCTTTCTGTAG+AGG | 0.485414 | 4.4:+2702882 | MS.gene049145:CDS |
| AAGGAGCGGTTCACAAATAG+AGG | 0.499596 | 4.4:+2701934 | MS.gene049145:CDS |
| GGAATTGATGAAATGAAGGC+TGG | 0.500310 | 4.4:+2705531 | MS.gene049145:CDS |
| TGGATAGATTAGGTGACAAA+TGG | 0.500700 | 4.4:-2703653 | None:intergenic |
| AGGGAACTGGAACTCCAGAC+TGG | 0.501664 | 4.4:-2703713 | None:intergenic |
| TACACTTACCTACTTCCAGT+TGG | 0.502099 | 4.4:-2702435 | None:intergenic |
| TTCATCAATTCCAATTACGT+TGG | 0.507088 | 4.4:-2705520 | None:intergenic |
| TGTGAACCGCTCCTTTCCCC+AGG | 0.508103 | 4.4:-2701926 | None:intergenic |
| GTTGGAAGCTGAGGAGGTGG+AGG | 0.510342 | 4.4:-2700940 | None:intergenic |
| GTGCTAAGGAGTACCCTTTG+AGG | 0.515736 | 4.4:+2702389 | MS.gene049145:CDS |
| TTGTAGTGTGTTCTTCCGGC+TGG | 0.518134 | 4.4:+2701033 | MS.gene049145:intron |
| AGAACAAACAGTTCCTCAAA+GGG | 0.520007 | 4.4:-2702402 | None:intergenic |
| ACAGTTGGAAGCTGAGGAGG+TGG | 0.522549 | 4.4:-2700943 | None:intergenic |
| CGCCGTGTTTCAGTGTGCTA+AGG | 0.522656 | 4.4:+2702375 | MS.gene049145:intron |
| AATCTATCCATTCCGATGGC+AGG | 0.525905 | 4.4:+2703666 | MS.gene049145:CDS |
| GGAAACGTGGAAGGATCGTT+CGG | 0.526572 | 4.4:-2701084 | None:intergenic |
| AACAAAGGCTACCATGGCCC+TGG | 0.531218 | 4.4:+2700856 | MS.gene049145:CDS |
| GCATGAACAAAGCTTATCCT+GGG | 0.534521 | 4.4:+2701909 | MS.gene049145:CDS |
| ACTTCTAACTCTTGCATCAG+AGG | 0.535914 | 4.4:+2703630 | MS.gene049145:CDS |
| ATGTTATGACTGATTGCTCA+TGG | 0.537472 | 4.4:+2703763 | MS.gene049145:CDS |
| CGATCCATTGATGGAAACAA+AGG | 0.538031 | 4.4:+2700841 | MS.gene049145:CDS |
| AGGATAACTCCGCGGAAACG+TGG | 0.541226 | 4.4:-2701097 | None:intergenic |
| TGGGGAAGTCCACAGTTTGG+TGG | 0.541714 | 4.4:-2702907 | None:intergenic |
| CATTCAGGTGTTGATACCAC+TGG | 0.544826 | 4.4:+2704121 | MS.gene049145:CDS |
| TAACTCCGCGGAAACGTGGA+AGG | 0.546490 | 4.4:-2701093 | None:intergenic |
| GCCATCGGAATGGATAGATT+AGG | 0.548771 | 4.4:-2703663 | None:intergenic |
| AGGAGTAGGCAAAGGTACAT+TGG | 0.549021 | 4.4:-2702830 | None:intergenic |
| AATTGGAATTGATGAAATGA+AGG | 0.556284 | 4.4:+2705527 | MS.gene049145:CDS |
| AAGGCTACCATGGCCCTGGT+TGG | 0.557571 | 4.4:+2700860 | MS.gene049145:CDS |
| CCAAACTTAGTGCTAAGCAA+TGG | 0.557658 | 4.4:+2705580 | MS.gene049145:CDS |
| TAGAACAAACAGTTCCTCAA+AGG | 0.559179 | 4.4:-2702403 | None:intergenic |
| CCTCATGTAGGTAGTTGTTG+TGG | 0.559958 | 4.4:+2705398 | MS.gene049145:intron |
| CACTTACCTACTTCCAGTTG+GGG | 0.564927 | 4.4:-2702433 | None:intergenic |
| GTTTCTCCCCAACTGGAAGT+AGG | 0.566442 | 4.4:+2702427 | MS.gene049145:CDS |
| TTGAATACCTGCCATCGGAA+TGG | 0.566666 | 4.4:-2703673 | None:intergenic |
| ATGTTTACAGTTGGAAGCTG+AGG | 0.567473 | 4.4:-2700949 | None:intergenic |
| GCATGGAACTCAACACCAGC+CGG | 0.568215 | 4.4:-2701048 | None:intergenic |
| ATGGGATATTATAGCACATA+CGG | 0.570044 | 4.4:+2702804 | MS.gene049145:intron |
| TTTACAGTTGGAAGCTGAGG+AGG | 0.574396 | 4.4:-2700946 | None:intergenic |
| GCTCCTACACCATATATGAT+GGG | 0.576246 | 4.4:+2704094 | MS.gene049145:CDS |
| GATACATCCAACCAGGGCCA+TGG | 0.577194 | 4.4:-2700867 | None:intergenic |
| TTTGAATACTTCGTTGTATG+CGG | 0.582756 | 4.4:+2700802 | MS.gene049145:CDS |
| GGGAAGTCCACAGTTTGGTG+GGG | 0.588065 | 4.4:-2702905 | None:intergenic |
| ACCTTTGCCTACTCCTGGAA+AGG | 0.589840 | 4.4:+2702837 | MS.gene049145:CDS |
| TCGTGATACGATTATACTCA+AGG | 0.591719 | 4.4:-2705422 | None:intergenic |
| ACCTAATCTATCCATTCCGA+TGG | 0.592111 | 4.4:+2703662 | MS.gene049145:CDS |
| TCGGATCAAATCCTGAAGCA+TGG | 0.594826 | 4.4:-2701065 | None:intergenic |
| TCCTTTCCAGGAGTAGGCAA+AGG | 0.596453 | 4.4:-2702838 | None:intergenic |
| GATGGAAACAAAGGCTACCA+TGG | 0.600245 | 4.4:+2700850 | MS.gene049145:CDS |
| ACAAAGCTTATCCTGGGGAA+AGG | 0.603691 | 4.4:+2701915 | MS.gene049145:CDS |
| AGACTGGAGTACAGAAGTGA+AGG | 0.610231 | 4.4:-2703697 | None:intergenic |
| ACGATCCTTCCACGTTTCCG+CGG | 0.610593 | 4.4:+2701088 | MS.gene049145:CDS |
| ATCAGTCATAACATTAAAGG+TGG | 0.611480 | 4.4:-2703754 | None:intergenic |
| AGTCCCATCATATATGGTGT+AGG | 0.611787 | 4.4:-2704097 | None:intergenic |
| CCAAACATCACCTTAGCTGA+AGG | 0.612496 | 4.4:-2705617 | None:intergenic |
| AAGATCACGACCTTCAGCTA+AGG | 0.614927 | 4.4:+2705607 | MS.gene049145:CDS |
| ACTCGCTCCTTTCCAGGAGT+AGG | 0.616308 | 4.4:-2702844 | None:intergenic |
| AAAGGAAGATACATCCAACC+AGG | 0.623596 | 4.4:-2700874 | None:intergenic |
| AATTCTGGCTCAGGAATAGG+TGG | 0.623661 | 4.4:-2705459 | None:intergenic |
| ACCATCCATTGTTAGACCAG+TGG | 0.627513 | 4.4:-2704137 | None:intergenic |
| AGGAGACCATACATCAACAT+GGG | 0.627641 | 4.4:-2702926 | None:intergenic |
| ACCACTGGTCTAACAATGGA+TGG | 0.631289 | 4.4:+2704136 | MS.gene049145:CDS |
| AAGGATTGAATACCTGCCAT+CGG | 0.635108 | 4.4:-2703678 | None:intergenic |
| GTAGAGGCCCCACCAAACTG+TGG | 0.643742 | 4.4:+2702898 | MS.gene049145:CDS |
| TAGGAGACCATACATCAACA+TGG | 0.644182 | 4.4:-2702927 | None:intergenic |
| TAATCGTATCACGACATCAG+AGG | 0.644786 | 4.4:+2705431 | MS.gene049145:CDS |
| GCTTATCCTGGGGAAAGGAG+CGG | 0.646827 | 4.4:+2701920 | MS.gene049145:CDS |
| TGATACCACTGGTCTAACAA+TGG | 0.655150 | 4.4:+2704132 | MS.gene049145:CDS |
| AAGGAAGATACATCCAACCA+GGG | 0.698693 | 4.4:-2700873 | None:intergenic |
| AAACTTAGTGCTAAGCAATG+GGG | 0.704785 | 4.4:+2705582 | MS.gene049145:CDS |
| CATGAACAAAGCTTATCCTG+GGG | 0.713268 | 4.4:+2701910 | MS.gene049145:CDS |
| GGAGACCATACATCAACATG+GGG | 0.715399 | 4.4:-2702925 | None:intergenic |
| AAAACAATAGGATAACTCCG+CGG | 0.808041 | 4.4:-2701105 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCATTGTATATTATAT+AGG | + | chr4.4:2703218-2703237 | MS.gene049145:intron | 10.0% |
| !!! | GAAAAAAAATCTAATTTTTT+TGG | - | chr4.4:2704653-2704672 | None:intergenic | 10.0% |
| !! | AAATTTAGAAATGTGAAATA+GGG | + | chr4.4:2705227-2705246 | MS.gene049145:intron | 15.0% |
| !! | TTAAATGGTTTAAATAACTT+TGG | + | chr4.4:2701232-2701251 | MS.gene049145:intron | 15.0% |
| !!! | CAACTTAATAAATCTTTTTA+CGG | + | chr4.4:2703061-2703080 | MS.gene049145:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | chr4.4:2704851-2704870 | MS.gene049145:intron | 15.0% |
| !!! | TTCATATTTAATTCATGTTT+TGG | - | chr4.4:2704675-2704694 | None:intergenic | 15.0% |
| !! | AAAATATTATGCAGATTTGA+AGG | - | chr4.4:2702059-2702078 | None:intergenic | 20.0% |
| !! | AAACATAAATATCTTGAGAA+AGG | + | chr4.4:2702022-2702041 | MS.gene049145:intron | 20.0% |
| !! | AACATAAATATCTTGAGAAA+GGG | + | chr4.4:2702023-2702042 | MS.gene049145:intron | 20.0% |
| !! | AATTTAGAAATGTGAAATAG+GGG | + | chr4.4:2705228-2705247 | MS.gene049145:intron | 20.0% |
| !! | AGCTATATGTTTATTTCAAA+AGG | - | chr4.4:2702654-2702673 | None:intergenic | 20.0% |
| !! | ATGATATCTGCATAAAATTT+AGG | - | chr4.4:2703010-2703029 | None:intergenic | 20.0% |
| !! | CAAATTTAGAAATGTGAAAT+AGG | + | chr4.4:2705226-2705245 | MS.gene049145:intron | 20.0% |
| !! | CCAAAATTTACTTAAAAAGT+TGG | + | chr4.4:2704820-2704839 | MS.gene049145:intron | 20.0% |
| !! | CGAGAATAAAATACAAAATA+GGG | - | chr4.4:2704954-2704973 | None:intergenic | 20.0% |
| !! | CTAATAGTCATAAATAAGAA+AGG | - | chr4.4:2703130-2703149 | None:intergenic | 20.0% |
| !! | CTAGACTACATAAATATTAA+CGG | - | chr4.4:2703299-2703318 | None:intergenic | 20.0% |
| !! | GCTATATGTTTATTTCAAAA+GGG | - | chr4.4:2702653-2702672 | None:intergenic | 20.0% |
| !! | TAATGATTTCCTATTTGTAT+TGG | + | chr4.4:2704330-2704349 | MS.gene049145:intron | 20.0% |
| !! | TACATATGAGTTTACTTTAA+AGG | - | chr4.4:2704571-2704590 | None:intergenic | 20.0% |
| !! | TAGACTACATAAATATTAAC+GGG | - | chr4.4:2703298-2703317 | None:intergenic | 20.0% |
| !! | TAGTTAGATATAGTGATTAA+AGG | - | chr4.4:2703802-2703821 | None:intergenic | 20.0% |
| !! | TCGAGAATAAAATACAAAAT+AGG | - | chr4.4:2704955-2704974 | None:intergenic | 20.0% |
| !!! | AAAAATCTAATTTTTTTGGG+AGG | - | chr4.4:2704649-2704668 | None:intergenic | 20.0% |
| !!! | AAAATCTAATTTTTTTGGGA+GGG | - | chr4.4:2704648-2704667 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr4.4:2704847-2704866 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGAAAATTTTTAG+AGG | - | chr4.4:2704508-2704527 | None:intergenic | 20.0% |
| !!! | AATAGGGTTAATTATGTTTT+TGG | - | chr4.4:2704938-2704957 | None:intergenic | 20.0% |
| !!! | AGTTGAAGAAAATTTTTAGA+GGG | - | chr4.4:2704507-2704526 | None:intergenic | 20.0% |
| !!! | ATTTCTTGCATGATTATTTT+TGG | + | chr4.4:2703441-2703460 | MS.gene049145:intron | 20.0% |
| !!! | ATTTTATTGTGTTAAGTTCT+CGG | + | chr4.4:2705273-2705292 | MS.gene049145:intron | 20.0% |
| !!! | CCAACTTTTTAAGTAAATTT+TGG | - | chr4.4:2704823-2704842 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr4.4:2704850-2704869 | MS.gene049145:intron | 20.0% |
| !!! | GTATTTCAATAAGTTTGTTT+TGG | + | chr4.4:2702144-2702163 | MS.gene049145:intron | 20.0% |
| !!! | TTTAGTTTATCTTCAATACA+TGG | - | chr4.4:2705133-2705152 | None:intergenic | 20.0% |
| !!! | TTTCTTGCATGATTATTTTT+GGG | + | chr4.4:2703442-2703461 | MS.gene049145:intron | 20.0% |
| ! | AAAAAACTAACATTAGAAGC+AGG | - | chr4.4:2704011-2704030 | None:intergenic | 25.0% |
| ! | AACAACTGAGATAAAATTGA+GGG | - | chr4.4:2703529-2703548 | None:intergenic | 25.0% |
| ! | AATACATGGAGTAAAACAAT+TGG | - | chr4.4:2705119-2705138 | None:intergenic | 25.0% |
| ! | AATTGGAATTGATGAAATGA+AGG | + | chr4.4:2705527-2705546 | MS.gene049145:CDS | 25.0% |
| ! | ACTGTATAGAACATACAAAA+AGG | - | chr4.4:2702562-2702581 | None:intergenic | 25.0% |
| ! | ACTTAAAAGTTTGATACAGA+GGG | + | chr4.4:2702227-2702246 | MS.gene049145:intron | 25.0% |
| ! | AGCTAATAAAATCCGAAAAA+GGG | - | chr4.4:2702956-2702975 | None:intergenic | 25.0% |
| ! | AGTAAAGTACAACTTATGAA+AGG | + | chr4.4:2701744-2701763 | MS.gene049145:intron | 25.0% |
| ! | ATAAAAAATTTACTGGGGAA+GGG | - | chr4.4:2703866-2703885 | None:intergenic | 25.0% |
| ! | CAAGATATTTATGTTTCGTA+AGG | - | chr4.4:2702018-2702037 | None:intergenic | 25.0% |
| ! | CATAATTTATCTATTTGAGG+AGG | - | chr4.4:2703839-2703858 | None:intergenic | 25.0% |
| ! | CGTTAATATTTATGTAGTCT+AGG | + | chr4.4:2703297-2703316 | MS.gene049145:intron | 25.0% |
| ! | CTACTTAGCTTATAAGATAT+TGG | - | chr4.4:2701356-2701375 | None:intergenic | 25.0% |
| ! | CTATAAGCACTTAATTAAGT+TGG | - | chr4.4:2701279-2701298 | None:intergenic | 25.0% |
| ! | CTCCTCAAATAGATAAATTA+TGG | + | chr4.4:2703837-2703856 | MS.gene049145:intron | 25.0% |
| ! | CTTATTGAAATACCAAATCA+TGG | - | chr4.4:2702137-2702156 | None:intergenic | 25.0% |
| ! | GTTGTGTATAACATAAACAA+AGG | - | chr4.4:2702528-2702547 | None:intergenic | 25.0% |
| ! | GTTTCCTAATATGCAAAAAT+TGG | - | chr4.4:2701843-2701862 | None:intergenic | 25.0% |
| ! | TATCTGCATAAAATTTAGGA+CGG | - | chr4.4:2703006-2703025 | None:intergenic | 25.0% |
| ! | TTTAGACGAAAATGATCTAT+AGG | + | chr4.4:2705068-2705087 | MS.gene049145:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr4.4:2704879-2704898 | MS.gene049145:intron | 25.0% |
| !! | ACAGCTTCATAATATTTTGT+AGG | + | chr4.4:2704432-2704451 | MS.gene049145:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr4.4:2704880-2704899 | MS.gene049145:intron | 25.0% |
| !! | ATATGAGTTTACTTTAAAGG+AGG | - | chr4.4:2704568-2704587 | None:intergenic | 25.0% |
| !! | CACTTTAGGTTAAAATAATC+AGG | + | chr4.4:2701628-2701647 | MS.gene049145:intron | 25.0% |
| !! | CAGCTTCATAATATTTTGTA+GGG | + | chr4.4:2704433-2704452 | MS.gene049145:intron | 25.0% |
| !! | CTTAATAAATCTTTTTACGG+TGG | + | chr4.4:2703064-2703083 | MS.gene049145:intron | 25.0% |
| !! | GAAAAGCGTACATATTTATA+GGG | - | chr4.4:2704476-2704495 | None:intergenic | 25.0% |
| !! | TATGAGTTTACTTTAAAGGA+GGG | - | chr4.4:2704567-2704586 | None:intergenic | 25.0% |
| !! | TATGCTCAAGATTTCTTTTA+AGG | - | chr4.4:2701867-2701886 | None:intergenic | 25.0% |
| !! | TCAATTTTATCTCAGTTGTT+CGG | + | chr4.4:2703529-2703548 | MS.gene049145:intron | 25.0% |
| !! | TCTTCCAATTTTTGCATATT+AGG | + | chr4.4:2701836-2701855 | MS.gene049145:intron | 25.0% |
| !! | TGACGATGAAAAAATTTTAG+AGG | - | chr4.4:2704536-2704555 | None:intergenic | 25.0% |
| !! | TGTAGGGTTAAATATGTTTT+TGG | + | chr4.4:2704449-2704468 | MS.gene049145:intron | 25.0% |
| !!! | AATTTTTTCATCGTCACTTT+TGG | + | chr4.4:2704540-2704559 | MS.gene049145:intron | 25.0% |
| !!! | ATAAGTTTGTTTTGGTTGAT+TGG | + | chr4.4:2702152-2702171 | MS.gene049145:intron | 25.0% |
| !!! | CGGAATAGAAAATTTTAAGT+GGG | - | chr4.4:2703916-2703935 | None:intergenic | 25.0% |
| !!! | CTTAAATTGCTACTTGATTT+TGG | + | chr4.4:2701164-2701183 | MS.gene049145:intron | 25.0% |
| !!! | CTTATTTCTATAAAAACTCC+AGG | - | chr4.4:2701396-2701415 | None:intergenic | 25.0% |
| !!! | TGTGTTGATATTTTAATGAG+TGG | - | chr4.4:2702609-2702628 | None:intergenic | 25.0% |
| !!! | TTCTTGCATGATTATTTTTG+GGG | + | chr4.4:2703443-2703462 | MS.gene049145:intron | 25.0% |
| !!! | TTGTTATTTAACCACTTATC+TGG | + | chr4.4:2703359-2703378 | MS.gene049145:intron | 25.0% |
| !!! | TTTTAGAATAAGTGTGTCAA+TGG | - | chr4.4:2704193-2704212 | None:intergenic | 25.0% |
| AAAACTTAACCAGCTTCTTA+TGG | + | chr4.4:2702475-2702494 | MS.gene049145:intron | 30.0% | |
| ACAACTGAGATAAAATTGAG+GGG | - | chr4.4:2703528-2703547 | None:intergenic | 30.0% | |
| ACGCGATAAAAAATTTACTG+GGG | - | chr4.4:2703871-2703890 | None:intergenic | 30.0% | |
| AGCTTTCTGCATAGATTAAA+TGG | + | chr4.4:2701217-2701236 | MS.gene049145:intron | 30.0% | |
| ATCAATAACAACACACTTCA+TGG | - | chr4.4:2701701-2701720 | None:intergenic | 30.0% | |
| ATCAGTCATAACATTAAAGG+TGG | - | chr4.4:2703757-2703776 | None:intergenic | 30.0% | |
| ATGAAGCATAGAGAAAATAC+AGG | - | chr4.4:2703249-2703268 | None:intergenic | 30.0% | |
| ATGCTTCATACTGATGAAAT+GGG | + | chr4.4:2703260-2703279 | MS.gene049145:intron | 30.0% | |
| ATGGGATATTATAGCACATA+CGG | + | chr4.4:2702804-2702823 | MS.gene049145:intron | 30.0% | |
| ATGTGATATGCATAAAGAAG+CGG | - | chr4.4:2703936-2703955 | None:intergenic | 30.0% | |
| CAAATCATGGCTTAAAATGA+GGG | - | chr4.4:2702124-2702143 | None:intergenic | 30.0% | |
| CACGCGATAAAAAATTTACT+GGG | - | chr4.4:2703872-2703891 | None:intergenic | 30.0% | |
| CAGCTAATAAAATCCGAAAA+AGG | - | chr4.4:2702957-2702976 | None:intergenic | 30.0% | |
| GAACAACTGAGATAAAATTG+AGG | - | chr4.4:2703530-2703549 | None:intergenic | 30.0% | |
| GACTTAAAAGTTTGATACAG+AGG | + | chr4.4:2702226-2702245 | MS.gene049145:intron | 30.0% | |
| GATAAAAAATTTACTGGGGA+AGG | - | chr4.4:2703867-2703886 | None:intergenic | 30.0% | |
| GCAATCAGTCATAACATTAA+AGG | - | chr4.4:2703760-2703779 | None:intergenic | 30.0% | |
| GCAATGGAAACACAAAATAA+TGG | - | chr4.4:2702743-2702762 | None:intergenic | 30.0% | |
| GCGTAGTGTATAATATAAGA+GGG | - | chr4.4:2703323-2703342 | None:intergenic | 30.0% | |
| GCTGAAATTGTTATAGAGTT+GGG | - | chr4.4:2702776-2702795 | None:intergenic | 30.0% | |
| GGCCATAATTTATCTATTTG+AGG | - | chr4.4:2703842-2703861 | None:intergenic | 30.0% | |
| GTATCAAATACATAACAACG+AGG | - | chr4.4:2704242-2704261 | None:intergenic | 30.0% | |
| TAAAAAATTTACTGGGGAAG+GGG | - | chr4.4:2703865-2703884 | None:intergenic | 30.0% | |
| TAAAGTAACAACCAGATAAG+TGG | - | chr4.4:2703373-2703392 | None:intergenic | 30.0% | |
| TAAGTTCTCGGTAATTGATT+TGG | + | chr4.4:2705285-2705304 | MS.gene049145:intron | 30.0% | |
| TACAGTTGTTGAATACTAGT+TGG | + | chr4.4:2704259-2704278 | MS.gene049145:intron | 30.0% | |
| TAGAACATACAAAAAGGCTT+TGG | - | chr4.4:2702556-2702575 | None:intergenic | 30.0% | |
| TATGCTTCATACTGATGAAA+TGG | + | chr4.4:2703259-2703278 | MS.gene049145:intron | 30.0% | |
| TCAAACTCTGTTTCAAATGA+TGG | + | chr4.4:2705345-2705364 | MS.gene049145:intron | 30.0% | |
| TCATCAATTCCAATTACGTT+GGG | - | chr4.4:2705522-2705541 | None:intergenic | 30.0% | |
| TGAATTACTTGGTAAGAAAC+TGG | - | chr4.4:2704219-2704238 | None:intergenic | 30.0% | |
| TGCGTAGTGTATAATATAAG+AGG | - | chr4.4:2703324-2703343 | None:intergenic | 30.0% | |
| TGCTGAAATTGTTATAGAGT+TGG | - | chr4.4:2702777-2702796 | None:intergenic | 30.0% | |
| TGTTTGTGAAGATGTTATAG+AGG | + | chr4.4:2702295-2702314 | MS.gene049145:intron | 30.0% | |
| TTAGTTGACATGTTCACTTT+AGG | + | chr4.4:2701614-2701633 | MS.gene049145:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | + | chr4.4:2704866-2704885 | MS.gene049145:intron | 30.0% | |
| TTATTACATCCCAACGTAAT+TGG | + | chr4.4:2705510-2705529 | MS.gene049145:CDS | 30.0% | |
| TTCATCAATTCCAATTACGT+TGG | - | chr4.4:2705523-2705542 | None:intergenic | 30.0% | |
| TTTGAATACTTCGTTGTATG+CGG | + | chr4.4:2700802-2700821 | MS.gene049145:CDS | 30.0% | |
| ! | AATATGTACGCTTTTCGTTT+TGG | + | chr4.4:2704480-2704499 | MS.gene049145:intron | 30.0% |
| ! | ATGAAGTGTGTTGTTATTGA+TGG | + | chr4.4:2701700-2701719 | MS.gene049145:intron | 30.0% |
| ! | CGAAAAGCGTACATATTTAT+AGG | - | chr4.4:2704477-2704496 | None:intergenic | 30.0% |
| ! | GCGGAATAGAAAATTTTAAG+TGG | - | chr4.4:2703917-2703936 | None:intergenic | 30.0% |
| ! | GGATTTTCACGATTTAACTA+AGG | - | chr4.4:2702722-2702741 | None:intergenic | 30.0% |
| ! | GTACTTTACTAATTTTCCTC+TGG | - | chr4.4:2701734-2701753 | None:intergenic | 30.0% |
| ! | TGAAGTGTGTTGTTATTGAT+GGG | + | chr4.4:2701701-2701720 | MS.gene049145:intron | 30.0% |
| ! | TTGAGAGAAGGATTTTACTT+CGG | + | chr4.4:2703093-2703112 | MS.gene049145:intron | 30.0% |
| ! | TTTGTCTTTTAACCTCATGT+AGG | + | chr4.4:2705386-2705405 | MS.gene049145:intron | 30.0% |
| !! | GTTGTTTTCATAAGTTATCC+TGG | + | chr4.4:2701375-2701394 | MS.gene049145:intron | 30.0% |
| !!! | AGTTATCCTATTGTTTTGAC+CGG | + | chr4.4:2701111-2701130 | MS.gene049145:CDS | 30.0% |
| !!! | CAGTAAATTTTTTATCGCGT+GGG | + | chr4.4:2703871-2703890 | MS.gene049145:intron | 30.0% |
| !!! | TACTTTTTCTCTGTCATCAA+TGG | + | chr4.4:2705318-2705337 | MS.gene049145:intron | 30.0% |
| !!! | TGGTTAAGTTTTTTCCATCA+TGG | - | chr4.4:2702467-2702486 | None:intergenic | 30.0% |
| AAAAAATTTACTGGGGAAGG+GGG | - | chr4.4:2703864-2703883 | None:intergenic | 35.0% | |
| AAAACAATAGGATAACTCCG+CGG | - | chr4.4:2701108-2701127 | None:intergenic | 35.0% | |
| AAAATCCGAAAAAGGGTTCT+AGG | - | chr4.4:2702949-2702968 | None:intergenic | 35.0% | |
| AAACTTAGTGCTAAGCAATG+GGG | + | chr4.4:2705582-2705601 | MS.gene049145:CDS | 35.0% | |
| AAGCATAGAGAAAATACAGG+TGG | - | chr4.4:2703246-2703265 | None:intergenic | 35.0% | |
| ACAGATGCATTTATCAGCAT+AGG | - | chr4.4:2702342-2702361 | None:intergenic | 35.0% | |
| AGAAACTGTTCCAAAGTGAA+TGG | + | chr4.4:2701985-2702004 | MS.gene049145:intron | 35.0% | |
| AGAACAAACAGTTCCTCAAA+GGG | - | chr4.4:2702405-2702424 | None:intergenic | 35.0% | |
| AGGAAGAAGATGTTTACAGT+TGG | - | chr4.4:2700961-2700980 | None:intergenic | 35.0% | |
| AGGACGGTTGTTAATTAATG+AGG | - | chr4.4:2702990-2703009 | None:intergenic | 35.0% | |
| AGGTATGAATCCATTCACTT+TGG | - | chr4.4:2701998-2702017 | None:intergenic | 35.0% | |
| AGTAACCTAAGAACCTTCAA+CGG | - | chr4.4:2704372-2704391 | None:intergenic | 35.0% | |
| ATCTTGAGAAAGGGTAATGT+TGG | + | chr4.4:2702032-2702051 | MS.gene049145:intron | 35.0% | |
| ATGTTATGACTGATTGCTCA+TGG | + | chr4.4:2703763-2703782 | MS.gene049145:CDS | 35.0% | |
| ATTAGAAGCAGGTCAACAAA+AGG | - | chr4.4:2704000-2704019 | None:intergenic | 35.0% | |
| CAAACTTAGTGCTAAGCAAT+GGG | + | chr4.4:2705581-2705600 | MS.gene049145:CDS | 35.0% | |
| CACACTTCTCAGTATAAGAA+TGG | - | chr4.4:2701591-2701610 | None:intergenic | 35.0% | |
| CATCGGTATCCAATACAAAT+AGG | - | chr4.4:2704342-2704361 | None:intergenic | 35.0% | |
| CATTCTTATACTGAGAAGTG+TGG | + | chr4.4:2701589-2701608 | MS.gene049145:intron | 35.0% | |
| CATTGCTTAGCACTAAGTTT+GGG | - | chr4.4:2705582-2705601 | None:intergenic | 35.0% | |
| CCAAATCATGGCTTAAAATG+AGG | - | chr4.4:2702125-2702144 | None:intergenic | 35.0% | |
| CCACGCGATAAAAAATTTAC+TGG | - | chr4.4:2703873-2703892 | None:intergenic | 35.0% | |
| GAATGAAGTCCCATCATATA+TGG | - | chr4.4:2704106-2704125 | None:intergenic | 35.0% | |
| GCAATAGAAGCTGTAGAAAT+AGG | + | chr4.4:2701887-2701906 | MS.gene049145:CDS | 35.0% | |
| GCTGTAAAATTTACTGCATC+TGG | - | chr4.4:2703493-2703512 | None:intergenic | 35.0% | |
| GGAAATTGATCGAGAAGAAA+AGG | - | chr4.4:2700895-2700914 | None:intergenic | 35.0% | |
| GGTTATCCATAATCCAGATA+GGG | - | chr4.4:2701258-2701277 | None:intergenic | 35.0% | |
| GTGTCTGTTACATTGAGATT+TGG | + | chr4.4:2703400-2703419 | MS.gene049145:intron | 35.0% | |
| GTTGGGAACATTAAAAGCAA+TGG | - | chr4.4:2702759-2702778 | None:intergenic | 35.0% | |
| TAAATAACTTTGGCCCTATC+TGG | + | chr4.4:2701242-2701261 | MS.gene049145:intron | 35.0% | |
| TAACAACGAGGTGAATTACT+TGG | - | chr4.4:2704230-2704249 | None:intergenic | 35.0% | |
| TAAGTGTAAGTGTTCCATGA+TGG | + | chr4.4:2702450-2702469 | MS.gene049145:intron | 35.0% | |
| TAGAACAAACAGTTCCTCAA+AGG | - | chr4.4:2702406-2702425 | None:intergenic | 35.0% | |
| TCGTGATACGATTATACTCA+AGG | - | chr4.4:2705425-2705444 | None:intergenic | 35.0% | |
| TGGATAGATTAGGTGACAAA+TGG | - | chr4.4:2703656-2703675 | None:intergenic | 35.0% | |
| TGGTTATCCATAATCCAGAT+AGG | - | chr4.4:2701259-2701278 | None:intergenic | 35.0% | |
| TGTGCTATAATATCCCATAG+TGG | - | chr4.4:2702802-2702821 | None:intergenic | 35.0% | |
| TTATTAGCAGCATAGAGTCA+GGG | + | chr4.4:2704994-2705013 | MS.gene049145:intron | 35.0% | |
| TTGATTGTAGTGTGTTCTTC+CGG | + | chr4.4:2701029-2701048 | MS.gene049145:intron | 35.0% | |
| TTTATTAGCAGCATAGAGTC+AGG | + | chr4.4:2704993-2705012 | MS.gene049145:intron | 35.0% | |
| ! | ACTCGAAAAAGTGAAAGCAT+AGG | - | chr4.4:2700981-2701000 | None:intergenic | 35.0% |
| ! | ATTGATGGGAATTTTACCAG+AGG | + | chr4.4:2701715-2701734 | MS.gene049145:intron | 35.0% |
| ! | CCTCATTTTAAGCCATGATT+TGG | + | chr4.4:2702122-2702141 | MS.gene049145:intron | 35.0% |
| ! | GTTTCGTCTGTATTTTCTTG+TGG | + | chr4.4:2703598-2703617 | MS.gene049145:intron | 35.0% |
| ! | TATATGATGGGACTTCATTC+AGG | + | chr4.4:2704106-2704125 | MS.gene049145:CDS | 35.0% |
| ! | TGAGAGAAGGATTTTACTTC+GGG | + | chr4.4:2703094-2703113 | MS.gene049145:intron | 35.0% |
| !! | AAAAAGCTTAATTCTGGCTC+AGG | - | chr4.4:2705471-2705490 | None:intergenic | 35.0% |
| !! | CTACTTGATTTTGGTGTATG+TGG | + | chr4.4:2701173-2701192 | MS.gene049145:intron | 35.0% |
| !! | GATCATTTTCGTCTAAAGTC+AGG | - | chr4.4:2705065-2705084 | None:intergenic | 35.0% |
| !!! | ACAAAAGGTGTCAGCATTTT+AGG | - | chr4.4:2703985-2704004 | None:intergenic | 35.0% |
| !!! | ATTCCATTGCTGTTTTACAG+TGG | + | chr4.4:2704055-2704074 | MS.gene049145:intron | 35.0% |
| !!! | CCAGTAAATTTTTTATCGCG+TGG | + | chr4.4:2703870-2703889 | MS.gene049145:intron | 35.0% |
| AAAAATTTACTGGGGAAGGG+GGG | - | chr4.4:2703863-2703882 | None:intergenic | 40.0% | |
| AAAGGAAGATACATCCAACC+AGG | - | chr4.4:2700877-2700896 | None:intergenic | 40.0% | |
| AACTAGGTGTCTGCTTGAAT+TGG | - | chr4.4:2701494-2701513 | None:intergenic | 40.0% | |
| AAGATGTTATAGAGGCCTAC+AGG | + | chr4.4:2702303-2702322 | MS.gene049145:intron | 40.0% | |
| AAGGAAGATACATCCAACCA+GGG | - | chr4.4:2700876-2700895 | None:intergenic | 40.0% | |
| AAGGATTGAATACCTGCCAT+CGG | - | chr4.4:2703681-2703700 | None:intergenic | 40.0% | |
| AAGTTTGATACAGAGGGTGA+TGG | + | chr4.4:2702233-2702252 | MS.gene049145:intron | 40.0% | |
| ACAATTTCAGCAAGCCACTA+TGG | + | chr4.4:2702785-2702804 | MS.gene049145:intron | 40.0% | |
| ACACTTACCTACTTCCAGTT+GGG | - | chr4.4:2702437-2702456 | None:intergenic | 40.0% | |
| ACAGGCTACAGAATGTAGAA+AGG | - | chr4.4:2705027-2705046 | None:intergenic | 40.0% | |
| ACATCTAAACACTGTACCAG+AGG | - | chr4.4:2703038-2703057 | None:intergenic | 40.0% | |
| ACCCACGCTAGAAGATATAA+CGG | - | chr4.4:2702186-2702205 | None:intergenic | 40.0% | |
| ACCTAATCTATCCATTCCGA+TGG | + | chr4.4:2703662-2703681 | MS.gene049145:CDS | 40.0% | |
| ACGTTAGCTGCATTTCTTTC+CGG | + | chr4.4:2702267-2702286 | MS.gene049145:intron | 40.0% | |
| ACTAACCGTTGAAGGTTCTT+AGG | + | chr4.4:2704364-2704383 | MS.gene049145:intron | 40.0% | |
| ACTCCACTGTAAAACAGCAA+TGG | - | chr4.4:2704061-2704080 | None:intergenic | 40.0% | |
| ACTTCTAACTCTTGCATCAG+AGG | + | chr4.4:2703630-2703649 | MS.gene049145:CDS | 40.0% | |
| AGCATACCGGTCAAAACAAT+AGG | - | chr4.4:2701120-2701139 | None:intergenic | 40.0% | |
| AGGAGACCATACATCAACAT+GGG | - | chr4.4:2702929-2702948 | None:intergenic | 40.0% | |
| AGTCCCATCATATATGGTGT+AGG | - | chr4.4:2704100-2704119 | None:intergenic | 40.0% | |
| ATCCGTTATATCTTCTAGCG+TGG | + | chr4.4:2702181-2702200 | MS.gene049145:intron | 40.0% | |
| ATGTTTACAGTTGGAAGCTG+AGG | - | chr4.4:2700952-2700971 | None:intergenic | 40.0% | |
| CAATTTCAGCAAGCCACTAT+GGG | + | chr4.4:2702786-2702805 | MS.gene049145:intron | 40.0% | |
| CATCTTCACAAACATGATCC+CGG | - | chr4.4:2702289-2702308 | None:intergenic | 40.0% | |
| CATGAACAAAGCTTATCCTG+GGG | + | chr4.4:2701910-2701929 | MS.gene049145:CDS | 40.0% | |
| CCAAACTTAGTGCTAAGCAA+TGG | + | chr4.4:2705580-2705599 | MS.gene049145:CDS | 40.0% | |
| CCACGCAAAAAGCTTAATTC+TGG | - | chr4.4:2705477-2705496 | None:intergenic | 40.0% | |
| CCATTGCTTAGCACTAAGTT+TGG | - | chr4.4:2705583-2705602 | None:intergenic | 40.0% | |
| CCTTCAACGGTTAGTATCAT+CGG | - | chr4.4:2704359-2704378 | None:intergenic | 40.0% | |
| CGATCCATTGATGGAAACAA+AGG | + | chr4.4:2700841-2700860 | MS.gene049145:CDS | 40.0% | |
| GAATTGTCTGCTTTCTGTAG+AGG | + | chr4.4:2702882-2702901 | MS.gene049145:CDS | 40.0% | |
| GCATGAACAAAGCTTATCCT+GGG | + | chr4.4:2701909-2701928 | MS.gene049145:CDS | 40.0% | |
| GCTCCTACACCATATATGAT+GGG | + | chr4.4:2704094-2704113 | MS.gene049145:CDS | 40.0% | |
| GGAATTGATGAAATGAAGGC+TGG | + | chr4.4:2705531-2705550 | MS.gene049145:CDS | 40.0% | |
| GTCACAATCTCAATAGCTGT+TGG | - | chr4.4:2702503-2702522 | None:intergenic | 40.0% | |
| TAATCGTATCACGACATCAG+AGG | + | chr4.4:2705431-2705450 | MS.gene049145:CDS | 40.0% | |
| TACACTTACCTACTTCCAGT+TGG | - | chr4.4:2702438-2702457 | None:intergenic | 40.0% | |
| TACTTCGTTGTATGCGGAAT+CGG | + | chr4.4:2700808-2700827 | MS.gene049145:CDS | 40.0% | |
| TAGGAGACCATACATCAACA+TGG | - | chr4.4:2702930-2702949 | None:intergenic | 40.0% | |
| TCCGTTATATCTTCTAGCGT+GGG | + | chr4.4:2702182-2702201 | MS.gene049145:intron | 40.0% | |
| TGCTCCTACACCATATATGA+TGG | + | chr4.4:2704093-2704112 | MS.gene049145:CDS | 40.0% | |
| TTCCAGTAGTGATAGTCTCT+TGG | + | chr4.4:2701777-2701796 | MS.gene049145:intron | 40.0% | |
| ! | ATGCAAGTACAGAAGCATAC+CGG | - | chr4.4:2701133-2701152 | None:intergenic | 40.0% |
| ! | CCAGAATTAAGCTTTTTGCG+TGG | + | chr4.4:2705474-2705493 | MS.gene049145:CDS | 40.0% |
| ! | GTAGCCTTTGTTTCCATCAA+TGG | - | chr4.4:2700848-2700867 | None:intergenic | 40.0% |
| ! | GTCTGCTTGAATTGGCTTAT+TGG | - | chr4.4:2701486-2701505 | None:intergenic | 40.0% |
| ! | TAAGTGTGTCAATGGTGATG+AGG | - | chr4.4:2704185-2704204 | None:intergenic | 40.0% |
| ! | TGATACCACTGGTCTAACAA+TGG | + | chr4.4:2704132-2704151 | MS.gene049145:CDS | 40.0% |
| !! | CTTAATTCTGGCTCAGGAAT+AGG | - | chr4.4:2705465-2705484 | None:intergenic | 40.0% |
| !! | CTTGGTGTTACTGCTTCTTT+GGG | + | chr4.4:2701795-2701814 | MS.gene049145:intron | 40.0% |
| !! | TCTTGGTGTTACTGCTTCTT+TGG | + | chr4.4:2701794-2701813 | MS.gene049145:intron | 40.0% |
| AAACCAGATCATTGCCACTG+GGG | - | chr4.4:2703173-2703192 | None:intergenic | 45.0% | |
| AAGATCACGACCTTCAGCTA+AGG | + | chr4.4:2705607-2705626 | MS.gene049145:CDS | 45.0% | |
| AAGGAGCGGTTCACAAATAG+AGG | + | chr4.4:2701934-2701953 | MS.gene049145:CDS | 45.0% | |
| AATCTATCCATTCCGATGGC+AGG | + | chr4.4:2703666-2703685 | MS.gene049145:CDS | 45.0% | |
| AATGTACCTTTGCCTACTCC+TGG | + | chr4.4:2702832-2702851 | MS.gene049145:CDS | 45.0% | |
| ACAAAGCTTATCCTGGGGAA+AGG | + | chr4.4:2701915-2701934 | MS.gene049145:CDS | 45.0% | |
| ACCATCCATTGTTAGACCAG+TGG | - | chr4.4:2704140-2704159 | None:intergenic | 45.0% | |
| AGAAACCAGATCATTGCCAC+TGG | - | chr4.4:2703175-2703194 | None:intergenic | 45.0% | |
| AGACTGGAGTACAGAAGTGA+AGG | - | chr4.4:2703700-2703719 | None:intergenic | 45.0% | |
| ATAGAGGCCTACAGGATACA+GGG | + | chr4.4:2702311-2702330 | MS.gene049145:intron | 45.0% | |
| CAAGCAGACACCTAGTTACT+TGG | + | chr4.4:2701497-2701516 | MS.gene049145:intron | 45.0% | |
| CACCAAGAGACTATCACTAC+TGG | - | chr4.4:2701782-2701801 | None:intergenic | 45.0% | |
| CACTTACCTACTTCCAGTTG+GGG | - | chr4.4:2702436-2702455 | None:intergenic | 45.0% | |
| CCACAACAACTACCTACATG+AGG | - | chr4.4:2705401-2705420 | None:intergenic | 45.0% | |
| CCATCAATGGATCGAATCTC+AGG | - | chr4.4:2700835-2700854 | None:intergenic | 45.0% | |
| CCGATGATACTAACCGTTGA+AGG | + | chr4.4:2704356-2704375 | MS.gene049145:intron | 45.0% | |
| CCTCATGTAGGTAGTTGTTG+TGG | + | chr4.4:2705398-2705417 | MS.gene049145:intron | 45.0% | |
| CCTGAGATTCGATCCATTGA+TGG | + | chr4.4:2700832-2700851 | MS.gene049145:CDS | 45.0% | |
| CGATAAAAACAGGAGGGAAC+TGG | - | chr4.4:2703729-2703748 | None:intergenic | 45.0% | |
| CGTTAGCTGCATTTCTTTCC+GGG | + | chr4.4:2702268-2702287 | MS.gene049145:intron | 45.0% | |
| CTCCTTAGCACACTGAAACA+CGG | - | chr4.4:2702380-2702399 | None:intergenic | 45.0% | |
| CTGTTGGATCCATAAGAAGC+TGG | - | chr4.4:2702487-2702506 | None:intergenic | 45.0% | |
| CTTTGGCCCTATCTGGATTA+TGG | + | chr4.4:2701249-2701268 | MS.gene049145:intron | 45.0% | |
| GAAACCAGATCATTGCCACT+GGG | - | chr4.4:2703174-2703193 | None:intergenic | 45.0% | |
| GACTTCCCCATGTTGATGTA+TGG | + | chr4.4:2702920-2702939 | MS.gene049145:intron | 45.0% | |
| GATGGAAACAAAGGCTACCA+TGG | + | chr4.4:2700850-2700869 | MS.gene049145:CDS | 45.0% | |
| GCCATCGGAATGGATAGATT+AGG | - | chr4.4:2703666-2703685 | None:intergenic | 45.0% | |
| GCTTATTGGAGCTTATCTGC+TGG | - | chr4.4:2701472-2701491 | None:intergenic | 45.0% | |
| GGAATTTCCCTGTATCCTGT+AGG | - | chr4.4:2702321-2702340 | None:intergenic | 45.0% | |
| GGAGACCATACATCAACATG+GGG | - | chr4.4:2702928-2702947 | None:intergenic | 45.0% | |
| GGATAGAGAGAGTGAGTAGA+AGG | - | chr4.4:2700919-2700938 | None:intergenic | 45.0% | |
| GGCATGAACAAAGCTTATCC+TGG | + | chr4.4:2701908-2701927 | MS.gene049145:CDS | 45.0% | |
| GTGCTGCGATAAAAACAGGA+GGG | - | chr4.4:2703735-2703754 | None:intergenic | 45.0% | |
| GTTACTTGGTCGTGAACCAT+AGG | + | chr4.4:2701511-2701530 | MS.gene049145:intron | 45.0% | |
| GTTCTATGTTTCTCCCCAAC+TGG | + | chr4.4:2702420-2702439 | MS.gene049145:CDS | 45.0% | |
| TAGAGAGAGTGAGTAGAAGG+TGG | - | chr4.4:2700916-2700935 | None:intergenic | 45.0% | |
| TAGCCTGTATGTCCACAATG+AGG | + | chr4.4:2705039-2705058 | MS.gene049145:intron | 45.0% | |
| TATAGAGGCCTACAGGATAC+AGG | + | chr4.4:2702310-2702329 | MS.gene049145:intron | 45.0% | |
| TCGGATCAAATCCTGAAGCA+TGG | - | chr4.4:2701068-2701087 | None:intergenic | 45.0% | |
| TGGTTCACGACCAAGTAACT+AGG | - | chr4.4:2701510-2701529 | None:intergenic | 45.0% | |
| TTCACTTCTGTACTCCAGTC+TGG | + | chr4.4:2703699-2703718 | MS.gene049145:CDS | 45.0% | |
| TTGAATACCTGCCATCGGAA+TGG | - | chr4.4:2703676-2703695 | None:intergenic | 45.0% | |
| TTTACAGTTGGAAGCTGAGG+AGG | - | chr4.4:2700949-2700968 | None:intergenic | 45.0% | |
| ! | ACCACTGGTCTAACAATGGA+TGG | + | chr4.4:2704136-2704155 | MS.gene049145:CDS | 45.0% |
| ! | AGGAGTAGGCAAAGGTACAT+TGG | - | chr4.4:2702833-2702852 | None:intergenic | 45.0% |
| ! | CGTCTGTATTTTCTTGTGGC+AGG | + | chr4.4:2703602-2703621 | MS.gene049145:intron | 45.0% |
| ! | GGTCTCCTAGAACCCTTTTT+CGG | + | chr4.4:2702941-2702960 | MS.gene049145:intron | 45.0% |
| ! | TCTAAAGTCAGGCCTCATTG+TGG | - | chr4.4:2705054-2705073 | None:intergenic | 45.0% |
| !! | AATTCTGGCTCAGGAATAGG+TGG | - | chr4.4:2705462-2705481 | None:intergenic | 45.0% |
| !! | CATTCAGGTGTTGATACCAC+TGG | + | chr4.4:2704121-2704140 | MS.gene049145:CDS | 45.0% |
| !! | GAAAAATTTATAATATTATA+AGG | + | chr4.4:2704620-2704639 | MS.gene049145:intron | 5.0% |
| !!! | AAAAAAAATCTAATTTTTTT+GGG | - | chr4.4:2704652-2704671 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+GGG | + | chr4.4:2704742-2704761 | MS.gene049145:intron | 5.0% |
| !!! | TTAAAAAATTCTAATTTTTT+TGG | + | chr4.4:2704741-2704760 | MS.gene049145:intron | 5.0% |
| AACAGAACTCGCTCCTTTCC+AGG | - | chr4.4:2702853-2702872 | None:intergenic | 50.0% | |
| ACACCATGACCTCGTTCCTA+TGG | - | chr4.4:2701530-2701549 | None:intergenic | 50.0% | |
| ACATGGGGAAGTCCACAGTT+TGG | - | chr4.4:2702913-2702932 | None:intergenic | 50.0% | |
| ACCTTTGCCTACTCCTGGAA+AGG | + | chr4.4:2702837-2702856 | MS.gene049145:CDS | 50.0% | |
| AGGAACGAGGTCATGGTGTA+CGG | + | chr4.4:2701531-2701550 | MS.gene049145:intron | 50.0% | |
| AGGCCTCATTGTGGACATAC+AGG | - | chr4.4:2705045-2705064 | None:intergenic | 50.0% | |
| AGTCACATTGACATCCCCAG+TGG | + | chr4.4:2703156-2703175 | MS.gene049145:intron | 50.0% | |
| CTAAACACTGTACCAGAGGC+TGG | - | chr4.4:2703034-2703053 | None:intergenic | 50.0% | |
| CTGAAGACGCACTGAAGATC+AGG | - | chr4.4:2704399-2704418 | None:intergenic | 50.0% | |
| GAACCATAGGAACGAGGTCA+TGG | + | chr4.4:2701524-2701543 | MS.gene049145:intron | 50.0% | |
| GCAGATATCATTCCAGCCTC+TGG | + | chr4.4:2703019-2703038 | MS.gene049145:intron | 50.0% | |
| GGAAACGTGGAAGGATCGTT+CGG | - | chr4.4:2701087-2701106 | None:intergenic | 50.0% | |
| GTTTCTCCCCAACTGGAAGT+AGG | + | chr4.4:2702427-2702446 | MS.gene049145:CDS | 50.0% | |
| TCCTTTCCAGGAGTAGGCAA+AGG | - | chr4.4:2702841-2702860 | None:intergenic | 50.0% | |
| TTGTAGTGTGTTCTTCCGGC+TGG | + | chr4.4:2701033-2701052 | MS.gene049145:intron | 50.0% | |
| ! | GGTGCTGCGATAAAAACAGG+AGG | - | chr4.4:2703736-2703755 | None:intergenic | 50.0% |
| ! | GGTGTTGAGTTCCATGCTTC+AGG | + | chr4.4:2701054-2701073 | MS.gene049145:CDS | 50.0% |
| !! | GGTGGTGCTGCGATAAAAAC+AGG | - | chr4.4:2703739-2703758 | None:intergenic | 50.0% |
| !! | GTGCTAAGGAGTACCCTTTG+AGG | + | chr4.4:2702389-2702408 | MS.gene049145:CDS | 50.0% |
| AACAAAGGCTACCATGGCCC+TGG | + | chr4.4:2700856-2700875 | MS.gene049145:CDS | 55.0% | |
| ACAGTTGGAAGCTGAGGAGG+TGG | - | chr4.4:2700946-2700965 | None:intergenic | 55.0% | |
| ACGATCCTTCCACGTTTCCG+CGG | + | chr4.4:2701088-2701107 | MS.gene049145:CDS | 55.0% | |
| ACTCGCTCCTTTCCAGGAGT+AGG | - | chr4.4:2702847-2702866 | None:intergenic | 55.0% | |
| AGGATAACTCCGCGGAAACG+TGG | - | chr4.4:2701100-2701119 | None:intergenic | 55.0% | |
| AGGGAACTGGAACTCCAGAC+TGG | - | chr4.4:2703716-2703735 | None:intergenic | 55.0% | |
| CATCCCCAGTGGCAATGATC+TGG | + | chr4.4:2703167-2703186 | MS.gene049145:intron | 55.0% | |
| CGCCGTGTTTCAGTGTGCTA+AGG | + | chr4.4:2702375-2702394 | MS.gene049145:intron | 55.0% | |
| GATACATCCAACCAGGGCCA+TGG | - | chr4.4:2700870-2700889 | None:intergenic | 55.0% | |
| GCATGGAACTCAACACCAGC+CGG | - | chr4.4:2701051-2701070 | None:intergenic | 55.0% | |
| GCTTATCCTGGGGAAAGGAG+CGG | + | chr4.4:2701920-2701939 | MS.gene049145:CDS | 55.0% | |
| GGGGAAGTCCACAGTTTGGT+GGG | - | chr4.4:2702909-2702928 | None:intergenic | 55.0% | |
| GGTCGTGAACCATAGGAACG+AGG | + | chr4.4:2701518-2701537 | MS.gene049145:intron | 55.0% | |
| TAACTCCGCGGAAACGTGGA+AGG | - | chr4.4:2701096-2701115 | None:intergenic | 55.0% | |
| TGGGGAAGTCCACAGTTTGG+TGG | - | chr4.4:2702910-2702929 | None:intergenic | 55.0% | |
| ! | GGGAAGTCCACAGTTTGGTG+GGG | - | chr4.4:2702908-2702927 | None:intergenic | 55.0% |
| AAGGCTACCATGGCCCTGGT+TGG | + | chr4.4:2700860-2700879 | MS.gene049145:CDS | 60.0% | |
| GTAGAGGCCCCACCAAACTG+TGG | + | chr4.4:2702898-2702917 | MS.gene049145:CDS | 60.0% | |
| GTTGGAAGCTGAGGAGGTGG+AGG | - | chr4.4:2700943-2700962 | None:intergenic | 60.0% | |
| TGTGAACCGCTCCTTTCCCC+AGG | - | chr4.4:2701929-2701948 | None:intergenic | 60.0% | |
| !! | CGGTGGTGCTGCTTGAGAGA+AGG | + | chr4.4:2703081-2703100 | MS.gene049145:intron | 60.0% |
| GGAAGCTGAGGAGGTGGAGG+AGG | - | chr4.4:2700940-2700959 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 2700790 | 2705632 | 2700790 | ID=MS.gene049145 |
| chr4.4 | mRNA | 2700790 | 2705632 | 2700790 | ID=MS.gene049145.t1;Parent=MS.gene049145 |
| chr4.4 | exon | 2700790 | 2700963 | 2700790 | ID=MS.gene049145.t1.exon1;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2700790 | 2700963 | 2700790 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2701039 | 2701132 | 2701039 | ID=MS.gene049145.t1.exon2;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2701039 | 2701132 | 2701039 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2701858 | 2701976 | 2701858 | ID=MS.gene049145.t1.exon3;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2701858 | 2701976 | 2701858 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2702388 | 2702448 | 2702388 | ID=MS.gene049145.t1.exon4;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2702388 | 2702448 | 2702388 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2702818 | 2702936 | 2702818 | ID=MS.gene049145.t1.exon5;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2702818 | 2702936 | 2702818 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2703624 | 2703784 | 2703624 | ID=MS.gene049145.t1.exon6;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2703624 | 2703784 | 2703624 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2704075 | 2704159 | 2704075 | ID=MS.gene049145.t1.exon7;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2704075 | 2704159 | 2704075 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| chr4.4 | exon | 2705408 | 2705632 | 2705408 | ID=MS.gene049145.t1.exon8;Parent=MS.gene049145.t1 |
| chr4.4 | CDS | 2705408 | 2705632 | 2705408 | ID=cds.MS.gene049145.t1;Parent=MS.gene049145.t1 |
| Gene Sequence |
| Protein sequence |
