Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049463.t1 | XP_003599292.2 | 96.6 | 437 | 15 | 0 | 1 | 437 | 1 | 437 | 6.50E-232 | 813.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049463.t1 | P51398 | 23.9 | 376 | 220 | 12 | 90 | 431 | 44 | 387 | 1.8e-17 | 92.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049463.t1 | G7J0M5 | 96.6 | 437 | 15 | 0 | 1 | 437 | 1 | 437 | 4.7e-232 | 813.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049463 | MS.gene051008 | 0.8087 | 2.72E-50 | -1.69E-46 |
| MS.gene049463 | MS.gene065379 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene049463 | MS.gene40160 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene049463 | MS.gene73008 | 0.814735 | 1.32E-51 | -1.69E-46 |
| MS.gene049463 | MS.gene77531 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene049463 | MS.gene81051 | 0.818131 | 2.30E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049463.t1 | MTR_3g031280 | 96.110 | 437 | 17 | 0 | 1 | 437 | 1 | 437 | 0.0 | 873 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049463.t1 | AT1G16870 | 67.822 | 404 | 124 | 2 | 39 | 436 | 70 | 473 | 0.0 | 575 |
Find 110 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTTGTCATTATTATTTA+AGG | 0.114353 | 3.2:+56637590 | MS.gene049463:CDS |
| ATGGGATTGGATCAAATATT+TGG | 0.190552 | 3.2:-56636789 | None:intergenic |
| GGGTATGGAGAAGGAGTTTA+AGG | 0.205373 | 3.2:+56634747 | MS.gene049463:CDS |
| GTGGCTGCGGTGGCGGTGGC+AGG | 0.226477 | 3.2:-56634385 | None:intergenic |
| GTACAATGAATCCTACTTAA+AGG | 0.259888 | 3.2:+56636756 | MS.gene049463:CDS |
| AAGCATTCACAGAAGATAAT+TGG | 0.280842 | 3.2:+56638198 | MS.gene049463:CDS |
| GGTGGCGGTGGCAGGGGTTT+TGG | 0.281153 | 3.2:-56634377 | None:intergenic |
| ACTCCAGCACCCTCACCTAA+TGG | 0.332107 | 3.2:-56636808 | None:intergenic |
| CTGTTACAATTCGTTCTTGT+CGG | 0.347934 | 3.2:+56637150 | MS.gene049463:CDS |
| CCTGTCTCCAGTATAATAAC+TGG | 0.349768 | 3.2:+56637102 | MS.gene049463:intron |
| TGTTGGCTTTGTTGGAGATT+TGG | 0.350001 | 3.2:-56634335 | None:intergenic |
| GGCTGCGGTGGCGGTGGCAG+GGG | 0.353298 | 3.2:-56634383 | None:intergenic |
| GTGAAGAGGCGTCGGCCATT+GGG | 0.360543 | 3.2:-56634487 | None:intergenic |
| GTTTCCTCGATACAGTTTAG+AGG | 0.363867 | 3.2:+56637558 | MS.gene049463:CDS |
| ATCGGCGGTGGCTGCGGTGG+CGG | 0.369999 | 3.2:-56634392 | None:intergenic |
| TGTTCCAGTGGTAGTGATTA+CGG | 0.385826 | 3.2:+56638786 | MS.gene049463:intron |
| GTAAGTTCTTTAGCATGTAT+TGG | 0.392858 | 3.2:-56637173 | None:intergenic |
| TGGCTGCGGTGGCGGTGGCA+GGG | 0.393191 | 3.2:-56634384 | None:intergenic |
| AAAGCTTCGTAAAGACTTAC+CGG | 0.396657 | 3.2:+56637510 | MS.gene049463:CDS |
| ATATTTGATCCAATCCCATT+AGG | 0.398910 | 3.2:+56636793 | MS.gene049463:CDS |
| ATGCTCTTCCCACAACTAAC+AGG | 0.405346 | 3.2:-56635792 | None:intergenic |
| CTCCAGCACCCTCACCTAAT+GGG | 0.410782 | 3.2:-56636807 | None:intergenic |
| AGTGAAGAGGCGTCGGCCAT+TGG | 0.420429 | 3.2:-56634488 | None:intergenic |
| CGACAAGAACGAATTGTAAC+AGG | 0.422331 | 3.2:-56637149 | None:intergenic |
| GAATGTCTACGAATAGTTGC+AGG | 0.429235 | 3.2:+56638808 | MS.gene049463:CDS |
| TTGGAGTGGTAGTTCGTTTG+AGG | 0.435531 | 3.2:+56636926 | MS.gene049463:CDS |
| GTTGAAAGATGTTGATTCAA+TGG | 0.436711 | 3.2:+56636837 | MS.gene049463:CDS |
| TAGTTTAGAGATGAGATTGT+TGG | 0.439195 | 3.2:-56634307 | None:intergenic |
| GGCTAGAGAAGAAGGTTGGT+TGG | 0.444143 | 3.2:+56635839 | MS.gene049463:CDS |
| TGGGGCCGACGTTGAGTGAT+GGG | 0.447063 | 3.2:-56634468 | None:intergenic |
| GTGAGGGTGCTGGAGTTGGT+TGG | 0.448655 | 3.2:+56636815 | MS.gene049463:CDS |
| GGCGGTGGCTGCGGTGGCGG+TGG | 0.448885 | 3.2:-56634389 | None:intergenic |
| TATCTTCTGTGAATGCTTCA+CGG | 0.451514 | 3.2:-56638193 | None:intergenic |
| TTGGGGCCGACGTTGAGTGA+TGG | 0.453507 | 3.2:-56634469 | None:intergenic |
| ATACCCATTGGCAACCCTTC+AGG | 0.454274 | 3.2:-56634730 | None:intergenic |
| GTTCAGTGGGCTAGAGAAGA+AGG | 0.458017 | 3.2:+56635831 | MS.gene049463:CDS |
| TAGATGGTCCTGTTAGTTGT+GGG | 0.458076 | 3.2:+56635784 | MS.gene049463:CDS |
| TGATCAATTGCAATAAGAAC+AGG | 0.464590 | 3.2:-56636976 | None:intergenic |
| TCATATAACATTGTACCTTC+AGG | 0.465490 | 3.2:-56636865 | None:intergenic |
| CGCTTGCAATGCTTGTTCAG+TGG | 0.466093 | 3.2:+56635817 | MS.gene049463:CDS |
| TTTCGTCGGCGGTGAGGTTG+CGG | 0.467640 | 3.2:-56634441 | None:intergenic |
| TTGTTCGTCGAAGAAGATAT+CGG | 0.472433 | 3.2:-56634410 | None:intergenic |
| GTTTACATTCAGTGAGTATG+AGG | 0.478979 | 3.2:+56637124 | MS.gene049463:CDS |
| GAAGATATCGGCGGTGGCTG+CGG | 0.488158 | 3.2:-56634398 | None:intergenic |
| GCACCCTCACCTAATGGGAT+TGG | 0.488190 | 3.2:-56636802 | None:intergenic |
| AGGACATTCTCAGCCTGGAC+AGG | 0.493448 | 3.2:-56635942 | None:intergenic |
| CTTTGAGGACATTCTCAGCC+TGG | 0.500631 | 3.2:-56635947 | None:intergenic |
| GTAAGTGCAGGTATCGTTGT+TGG | 0.502261 | 3.2:-56634536 | None:intergenic |
| ATGTTCCTAGCGCAAAAGAA+TGG | 0.502917 | 3.2:+56635868 | MS.gene049463:CDS |
| TGAAGGGTTGCCAATGGGTA+TGG | 0.506428 | 3.2:+56634732 | MS.gene049463:CDS |
| AGCATCCGCAAACAGAGCTA+TGG | 0.506948 | 3.2:+56635913 | MS.gene049463:CDS |
| GCTTGCAATGCTTGTTCAGT+GGG | 0.509576 | 3.2:+56635818 | MS.gene049463:CDS |
| GTTGTTGGTGAGCTTAGATA+AGG | 0.511417 | 3.2:-56634521 | None:intergenic |
| ATCCCATTAGGTGAGGGTGC+TGG | 0.514336 | 3.2:+56636805 | MS.gene049463:CDS |
| ATGTGGTCGCCTCATGGTAA+AGG | 0.516349 | 3.2:+56634850 | MS.gene049463:CDS |
| TTGCCTGAAGGGTTGCCAAT+GGG | 0.516362 | 3.2:+56634727 | MS.gene049463:CDS |
| TCACTCAACGTCGGCCCCAA+TGG | 0.516467 | 3.2:+56634472 | MS.gene049463:CDS |
| GATATCGGCGGTGGCTGCGG+TGG | 0.519148 | 3.2:-56634395 | None:intergenic |
| GCATGGCAGTTCCTTTAAGT+AGG | 0.520686 | 3.2:-56636767 | None:intergenic |
| TTAGGTGAGGGTGCTGGAGT+TGG | 0.522232 | 3.2:+56636811 | MS.gene049463:CDS |
| CCGCCAATGTGGTCGCCTCA+TGG | 0.524636 | 3.2:+56634844 | MS.gene049463:CDS |
| TTAGATGGTCCTGTTAGTTG+TGG | 0.530984 | 3.2:+56635783 | MS.gene049463:CDS |
| AACTCCTTCTCCATACCCAT+TGG | 0.538826 | 3.2:-56634742 | None:intergenic |
| TGCATGATGATATGATGGTA+GGG | 0.542729 | 3.2:+56637461 | MS.gene049463:CDS |
| GCATCCGCAAACAGAGCTAT+GGG | 0.545282 | 3.2:+56635914 | MS.gene049463:CDS |
| TTCTCTCATTCAACAGCTGT+AGG | 0.545667 | 3.2:+56637487 | MS.gene049463:CDS |
| TTATATGAGCTGGTGAAGAC+TGG | 0.546286 | 3.2:+56636880 | MS.gene049463:CDS |
| CCATGAGGCGACCACATTGG+CGG | 0.548600 | 3.2:-56634844 | None:intergenic |
| CGTGAGGTTAAAGTAAGTGC+AGG | 0.548871 | 3.2:-56634548 | None:intergenic |
| GCTATGGGATACACCTGTCC+AGG | 0.548901 | 3.2:+56635929 | MS.gene049463:CDS |
| GTATCCCATAGCTCTGTTTG+CGG | 0.550833 | 3.2:-56635918 | None:intergenic |
| TTTGCCTGAAGGGTTGCCAA+TGG | 0.554252 | 3.2:+56634726 | MS.gene049463:CDS |
| AGCGCAAAAGAATGGACTCA+TGG | 0.561206 | 3.2:+56635876 | MS.gene049463:CDS |
| AATGATGCATGATGATATGA+TGG | 0.562422 | 3.2:+56637456 | MS.gene049463:CDS |
| CGAGCATCTACCGGTACATC+CGG | 0.564569 | 3.2:-56637529 | None:intergenic |
| TGAAGAGGCGTCGGCCATTG+GGG | 0.565973 | 3.2:-56634486 | None:intergenic |
| ATGGGAATGGAACAGAAATG+AGG | 0.568750 | 3.2:+56638243 | MS.gene049463:CDS |
| GAACAAACACATGCAGCTGT+TGG | 0.571799 | 3.2:+56636907 | MS.gene049463:CDS |
| TGAAATTGAGATATATGAGA+AGG | 0.572412 | 3.2:+56638833 | MS.gene049463:CDS |
| AGGAAGAAGCGGAAGTGAAG+AGG | 0.574555 | 3.2:-56634501 | None:intergenic |
| AACATAGCACGAGCATCTAC+CGG | 0.574696 | 3.2:-56637538 | None:intergenic |
| GAAGGCAAAAGCTTGGTGGT+TGG | 0.575180 | 3.2:+56638851 | MS.gene049463:CDS |
| TAAAGACTTACCGGATGTAC+CGG | 0.575503 | 3.2:+56637519 | MS.gene049463:CDS |
| ATGAGAAGGCAAAAGCTTGG+TGG | 0.575942 | 3.2:+56638847 | MS.gene049463:CDS |
| ATTGGATCAAATATTTGGCA+TGG | 0.576246 | 3.2:-56636784 | None:intergenic |
| ATGCATGATGATATGATGGT+AGG | 0.579098 | 3.2:+56637460 | MS.gene049463:CDS |
| GTCGAAGAAGATATCGGCGG+TGG | 0.584859 | 3.2:-56634404 | None:intergenic |
| ATAATAATGACAAACAGTCT+CGG | 0.588365 | 3.2:-56637584 | None:intergenic |
| TATATGAGAAGGCAAAAGCT+TGG | 0.588706 | 3.2:+56638844 | MS.gene049463:CDS |
| AGTGGGCTAGAGAAGAAGGT+TGG | 0.589906 | 3.2:+56635835 | MS.gene049463:CDS |
| TGGGAATGGAACAGAAATGA+GGG | 0.590727 | 3.2:+56638244 | MS.gene049463:CDS |
| TGATCCAATCCCATTAGGTG+AGG | 0.592137 | 3.2:+56636798 | MS.gene049463:CDS |
| GAGCTTAGATAAGGAAGAAG+CGG | 0.593215 | 3.2:-56634512 | None:intergenic |
| GTTGCCAATGGGTATGGAGA+AGG | 0.594421 | 3.2:+56634738 | MS.gene049463:CDS |
| GATTCAATGGCAATTCCTGA+AGG | 0.594538 | 3.2:+56636850 | MS.gene049463:CDS |
| AAGCGGAAGTGAAGAGGCGT+CGG | 0.595716 | 3.2:-56634495 | None:intergenic |
| AGGTACAATGTTATATGAGC+TGG | 0.596373 | 3.2:+56636870 | MS.gene049463:CDS |
| GATCCAATCCCATTAGGTGA+GGG | 0.607998 | 3.2:+56636799 | MS.gene049463:CDS |
| AACACATGCAGCTGTTGGAG+TGG | 0.617662 | 3.2:+56636912 | MS.gene049463:CDS |
| GGGAATGGAACAGAAATGAG+GGG | 0.638982 | 3.2:+56638245 | MS.gene049463:CDS |
| TTACCATGAGGCGACCACAT+TGG | 0.642549 | 3.2:-56634847 | None:intergenic |
| AATGTCTACGAATAGTTGCA+GGG | 0.646363 | 3.2:+56638809 | MS.gene049463:CDS |
| ACATGCTAAAGAACTTACAA+TGG | 0.647929 | 3.2:+56637178 | MS.gene049463:CDS |
| GCATGATGATATGATGGTAG+GGG | 0.656006 | 3.2:+56637462 | MS.gene049463:CDS |
| GGAATGGAACAGAAATGAGG+GGG | 0.689590 | 3.2:+56638246 | MS.gene049463:CDS |
| GCTTCCTCTAAACTGTATCG+AGG | 0.702408 | 3.2:-56637562 | None:intergenic |
| GCAAAAGAATGGACTCATGG+AGG | 0.714182 | 3.2:+56635879 | MS.gene049463:CDS |
| TTCGTCGAAGAAGATATCGG+CGG | 0.736759 | 3.2:-56634407 | None:intergenic |
| GTGTTGTTGATCCGCCAATG+TGG | 0.743316 | 3.2:+56634833 | MS.gene049463:CDS |
| AAAACCGCACCTTTACCATG+AGG | 0.745583 | 3.2:-56634859 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATATACAAATAAGT+AGG | - | chr3.2:56636598-56636617 | None:intergenic | 10.0% |
| !! | TTTATCAATAAAAAATGTAT+AGG | - | chr3.2:56637241-56637260 | None:intergenic | 10.0% |
| !!! | AATCTTTTTTAAATTTTGTA+GGG | + | chr3.2:56635736-56635755 | MS.gene049463:intron | 10.0% |
| !! | AAAATTAATACTTCTACTTA+AGG | - | chr3.2:56637905-56637924 | None:intergenic | 15.0% |
| !! | AAGAAACATCAATATTATTA+TGG | - | chr3.2:56638353-56638372 | None:intergenic | 15.0% |
| !! | ATATTCTTTCAAAAGATATT+AGG | - | chr3.2:56638056-56638075 | None:intergenic | 15.0% |
| !! | GAAAAAGATATAAATATACA+AGG | - | chr3.2:56637878-56637897 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTAAATTTTGTAG+GGG | + | chr3.2:56635737-56635756 | MS.gene049463:intron | 15.0% |
| !!! | GAATCTTTTTTAAATTTTGT+AGG | + | chr3.2:56635735-56635754 | MS.gene049463:intron | 15.0% |
| !!! | TATTTTTTACTATGATAACT+AGG | + | chr3.2:56637988-56638007 | MS.gene049463:intron | 15.0% |
| !!! | TCAATTTTTGACTTTTTTTT+GGG | + | chr3.2:56634650-56634669 | MS.gene049463:intron | 15.0% |
| !!! | TTCAATTTTTGACTTTTTTT+TGG | + | chr3.2:56634649-56634668 | MS.gene049463:intron | 15.0% |
| !! | AACAATGATACATTACAAAT+AGG | - | chr3.2:56637752-56637771 | None:intergenic | 20.0% |
| !! | CTGTTTGTCATTATTATTTA+AGG | + | chr3.2:56637590-56637609 | MS.gene049463:CDS | 20.0% |
| !! | CTTAGAAATGAACTATATTT+AGG | + | chr3.2:56636259-56636278 | MS.gene049463:intron | 20.0% |
| !! | TATAAAAACACAAGAAAATC+AGG | - | chr3.2:56638150-56638169 | None:intergenic | 20.0% |
| !! | TATTAGAGAAACTATCAAAA+AGG | + | chr3.2:56635193-56635212 | MS.gene049463:intron | 20.0% |
| !! | TTATAGAAATATACCATGTT+TGG | - | chr3.2:56635517-56635536 | None:intergenic | 20.0% |
| !! | TTTCAGTATCAATCAAAAAA+GGG | - | chr3.2:56638087-56638106 | None:intergenic | 20.0% |
| !!! | AAAGTTATTTCTATAGCAAA+AGG | - | chr3.2:56635429-56635448 | None:intergenic | 20.0% |
| !!! | AAGTTAACTTTTCTCAAAAT+TGG | + | chr3.2:56637044-56637063 | MS.gene049463:intron | 20.0% |
| !!! | AATATGAAACACAATTTTCA+AGG | - | chr3.2:56638127-56638146 | None:intergenic | 20.0% |
| !!! | AGTTAACTTTTCTCAAAATT+GGG | + | chr3.2:56637045-56637064 | MS.gene049463:intron | 20.0% |
| !!! | ATTCATTTTGATCAAGTAAA+GGG | - | chr3.2:56638613-56638632 | None:intergenic | 20.0% |
| !!! | GTGAATTGTTTTACTTTTAT+CGG | - | chr3.2:56638656-56638675 | None:intergenic | 20.0% |
| !!! | TATTCATTTTGATCAAGTAA+AGG | - | chr3.2:56638614-56638633 | None:intergenic | 20.0% |
| !!! | TCATAATATGATTTTGAAGA+AGG | + | chr3.2:56636559-56636578 | MS.gene049463:intron | 20.0% |
| ! | AAAACATTCAAAGTTACTCT+GGG | - | chr3.2:56636708-56636727 | None:intergenic | 25.0% |
| ! | AAACTCATAATCTTACTTTG+AGG | - | chr3.2:56635965-56635984 | None:intergenic | 25.0% |
| ! | AAGCAAATTAAACAGATTAG+TGG | - | chr3.2:56638434-56638453 | None:intergenic | 25.0% |
| ! | AGATAAAAAAACCTAACATC+TGG | - | chr3.2:56638576-56638595 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+TGG | + | chr3.2:56635501-56635520 | MS.gene049463:intron | 25.0% |
| ! | ATAATAATGACAAACAGTCT+CGG | - | chr3.2:56637587-56637606 | None:intergenic | 25.0% |
| ! | ATAGATTTACAAGTGCATAT+CGG | - | chr3.2:56637783-56637802 | None:intergenic | 25.0% |
| ! | ATATATTGTCATGATTATGC+AGG | + | chr3.2:56636416-56636435 | MS.gene049463:intron | 25.0% |
| ! | ATCAATTTATAGAGTTGCAT+AGG | + | chr3.2:56636126-56636145 | MS.gene049463:intron | 25.0% |
| ! | ATCATAGGATAGGATAAAAT+TGG | + | chr3.2:56638391-56638410 | MS.gene049463:intron | 25.0% |
| ! | ATGACTATCTTAATATACAC+AGG | + | chr3.2:56637362-56637381 | MS.gene049463:intron | 25.0% |
| ! | ATGTAAACCAGTTATTATAC+TGG | - | chr3.2:56637112-56637131 | None:intergenic | 25.0% |
| ! | ATTGGCAATGTATTTCTTAT+AGG | - | chr3.2:56636238-56636257 | None:intergenic | 25.0% |
| ! | CAATGTTGATGTATACATAT+TGG | + | chr3.2:56635679-56635698 | MS.gene049463:intron | 25.0% |
| ! | GTTTCAGTATCAATCAAAAA+AGG | - | chr3.2:56638088-56638107 | None:intergenic | 25.0% |
| ! | TACTCTAAACTTACTTCTTT+GGG | + | chr3.2:56637309-56637328 | MS.gene049463:intron | 25.0% |
| ! | TATAGTTCATTTCTAAGCAT+TGG | - | chr3.2:56636256-56636275 | None:intergenic | 25.0% |
| ! | TCAAATATGCCAATTTAAAC+AGG | + | chr3.2:56635639-56635658 | MS.gene049463:intron | 25.0% |
| ! | TCTTTCAAAAGATATTAGGT+AGG | - | chr3.2:56638052-56638071 | None:intergenic | 25.0% |
| ! | TGAAATTGAGATATATGAGA+AGG | + | chr3.2:56638833-56638852 | MS.gene049463:CDS | 25.0% |
| ! | TGCTTATGTATAGACTATAT+GGG | + | chr3.2:56634960-56634979 | MS.gene049463:intron | 25.0% |
| ! | TTACTCTAAACTTACTTCTT+TGG | + | chr3.2:56637308-56637327 | MS.gene049463:intron | 25.0% |
| !! | AACAATTTTACATGACATGT+GGG | - | chr3.2:56636457-56636476 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTTCA+AGG | - | chr3.2:56635185-56635204 | None:intergenic | 25.0% |
| !! | TAACAATTTTACATGACATG+TGG | - | chr3.2:56636458-56636477 | None:intergenic | 25.0% |
| !! | TTTTTATATTTGACAGGCAA+AGG | + | chr3.2:56638162-56638181 | MS.gene049463:intron | 25.0% |
| !!! | AGATGTAACTTTTTAAGATG+AGG | + | chr3.2:56638724-56638743 | MS.gene049463:intron | 25.0% |
| !!! | CTTGTGTTTTTATATTTGAC+AGG | + | chr3.2:56638156-56638175 | MS.gene049463:intron | 25.0% |
| !!! | TATGATTTTGAAGAAGGAAA+AGG | + | chr3.2:56636565-56636584 | MS.gene049463:intron | 25.0% |
| !!! | TGAACATCATTTTAACATCA+AGG | - | chr3.2:56637017-56637036 | None:intergenic | 25.0% |
| !!! | TTAAGCTTTGTTTTTCATTG+TGG | + | chr3.2:56634591-56634610 | MS.gene049463:intron | 25.0% |
| AAAGATAAAACATGTACGTG+AGG | - | chr3.2:56634567-56634586 | None:intergenic | 30.0% | |
| AACTAGGATCTATCATACAT+TGG | + | chr3.2:56638004-56638023 | MS.gene049463:intron | 30.0% | |
| AAGCATTCACAGAAGATAAT+TGG | + | chr3.2:56638198-56638217 | MS.gene049463:CDS | 30.0% | |
| AATGATGCATGATGATATGA+TGG | + | chr3.2:56637456-56637475 | MS.gene049463:CDS | 30.0% | |
| ACATGCTAAAGAACTTACAA+TGG | + | chr3.2:56637178-56637197 | MS.gene049463:CDS | 30.0% | |
| ACATTGAAAGTAATCGAGTA+AGG | - | chr3.2:56635665-56635684 | None:intergenic | 30.0% | |
| ACTGTACTAATATAGTAACC+TGG | - | chr3.2:56636484-56636503 | None:intergenic | 30.0% | |
| ATAAAACAGCATACGATGTT+TGG | + | chr3.2:56635050-56635069 | MS.gene049463:intron | 30.0% | |
| ATAGACTATATGGGTATGTT+TGG | + | chr3.2:56634969-56634988 | MS.gene049463:intron | 30.0% | |
| ATATTTGATCCAATCCCATT+AGG | + | chr3.2:56636793-56636812 | MS.gene049463:CDS | 30.0% | |
| ATGGGATTGGATCAAATATT+TGG | - | chr3.2:56636792-56636811 | None:intergenic | 30.0% | |
| ATTGGATCAAATATTTGGCA+TGG | - | chr3.2:56636787-56636806 | None:intergenic | 30.0% | |
| ATTTATAGAGTTGCATAGGA+TGG | + | chr3.2:56636130-56636149 | MS.gene049463:intron | 30.0% | |
| CAAAACATTCAAAGTTACTC+TGG | - | chr3.2:56636709-56636728 | None:intergenic | 30.0% | |
| CATGTAAAATTGTTAGTACC+AGG | + | chr3.2:56636463-56636482 | MS.gene049463:intron | 30.0% | |
| GAGCTATATTATCATAGGAT+AGG | + | chr3.2:56638381-56638400 | MS.gene049463:intron | 30.0% | |
| GTAAGTTCTTTAGCATGTAT+TGG | - | chr3.2:56637176-56637195 | None:intergenic | 30.0% | |
| GTACAATGAATCCTACTTAA+AGG | + | chr3.2:56636756-56636775 | MS.gene049463:CDS | 30.0% | |
| GTCATGAGCTATATTATCAT+AGG | + | chr3.2:56638376-56638395 | MS.gene049463:intron | 30.0% | |
| GTGCTTATGTATAGACTATA+TGG | + | chr3.2:56634959-56634978 | MS.gene049463:intron | 30.0% | |
| TAAACTACCAGGTCAATTAT+AGG | - | chr3.2:56636215-56636234 | None:intergenic | 30.0% | |
| TAGTTTAGAGATGAGATTGT+TGG | - | chr3.2:56634310-56634329 | None:intergenic | 30.0% | |
| TATAAGTAATGCTATCAACC+TGG | - | chr3.2:56637639-56637658 | None:intergenic | 30.0% | |
| TATACAAGGTCATTAATCCA+TGG | - | chr3.2:56637864-56637883 | None:intergenic | 30.0% | |
| TATCACCTGCTCTTAATATT+TGG | + | chr3.2:56637939-56637958 | MS.gene049463:intron | 30.0% | |
| TCATATAACATTGTACCTTC+AGG | - | chr3.2:56636868-56636887 | None:intergenic | 30.0% | |
| TGATAAACCTATACGCATAT+AGG | + | chr3.2:56636503-56636522 | MS.gene049463:intron | 30.0% | |
| TGATCAATTGCAATAAGAAC+AGG | - | chr3.2:56636979-56636998 | None:intergenic | 30.0% | |
| TGTATACAAAACCATAGCAT+TGG | - | chr3.2:56636391-56636410 | None:intergenic | 30.0% | |
| TTTCTTATAGGTAAACTACC+AGG | - | chr3.2:56636226-56636245 | None:intergenic | 30.0% | |
| TTTCTTCAACAAATGATCCA+TGG | + | chr3.2:56637844-56637863 | MS.gene049463:intron | 30.0% | |
| ! | AGTAAGCAGAAAGCATATAT+TGG | - | chr3.2:56637412-56637431 | None:intergenic | 30.0% |
| ! | CAGAGTAACTTTGAATGTTT+TGG | + | chr3.2:56636707-56636726 | MS.gene049463:intron | 30.0% |
| ! | GTGTTTTCTTTATGATGCTT+TGG | + | chr3.2:56636094-56636113 | MS.gene049463:intron | 30.0% |
| ! | TGCTAAATACACTTTTCAGT+TGG | + | chr3.2:56636027-56636046 | MS.gene049463:intron | 30.0% |
| ! | TGTTTGCTAAATTCATGTTG+AGG | + | chr3.2:56635704-56635723 | MS.gene049463:intron | 30.0% |
| ! | TTACACAACATTTGATTCGA+CGG | - | chr3.2:56638694-56638713 | None:intergenic | 30.0% |
| ! | TTGTTGGTGTGAGATTTTTA+AGG | - | chr3.2:56634294-56634313 | None:intergenic | 30.0% |
| !! | ATAGGCTTTGGATATTGTTT+GGG | + | chr3.2:56635020-56635039 | MS.gene049463:intron | 30.0% |
| !! | GTTGAAAGATGTTGATTCAA+TGG | + | chr3.2:56636837-56636856 | MS.gene049463:CDS | 30.0% |
| !! | GTTTTGGATAATTTTCTTCC+AGG | + | chr3.2:56636723-56636742 | MS.gene049463:intron | 30.0% |
| !!! | AACTTTTTAAGATGAGGTAC+AGG | + | chr3.2:56638730-56638749 | MS.gene049463:intron | 30.0% |
| !!! | TGAATGATTGTTTTTTGCTG+CGG | - | chr3.2:56634269-56634288 | None:intergenic | 30.0% |
| !!! | TTTTTGGGTTTTGTGTTTCT+GGG | + | chr3.2:56634665-56634684 | MS.gene049463:intron | 30.0% |
| !!! | TTTTTTGGGTTTTGTGTTTC+TGG | + | chr3.2:56634664-56634683 | MS.gene049463:intron | 30.0% |
| AAACCTTATCTCACTAAGTG+GGG | - | chr3.2:56635296-56635315 | None:intergenic | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr3.2:56635076-56635095 | MS.gene049463:intron | 35.0% | |
| AAAGCTTCGTAAAGACTTAC+CGG | + | chr3.2:56637510-56637529 | MS.gene049463:CDS | 35.0% | |
| AATCAACATTCTCTCCAAGT+AGG | - | chr3.2:56636364-56636383 | None:intergenic | 35.0% | |
| AATGTCTACGAATAGTTGCA+GGG | + | chr3.2:56638809-56638828 | MS.gene049463:CDS | 35.0% | |
| ACAGTCAGAACACATTTCAT+TGG | - | chr3.2:56638327-56638346 | None:intergenic | 35.0% | |
| AGAGACCAAATATTAAGAGC+AGG | - | chr3.2:56637947-56637966 | None:intergenic | 35.0% | |
| AGGAGAGTAGTTTAGATAGA+GGG | + | chr3.2:56635132-56635151 | MS.gene049463:intron | 35.0% | |
| AGGTACAATGTTATATGAGC+TGG | + | chr3.2:56636870-56636889 | MS.gene049463:CDS | 35.0% | |
| ATGCATGATGATATGATGGT+AGG | + | chr3.2:56637460-56637479 | MS.gene049463:CDS | 35.0% | |
| CAAACCTTATCTCACTAAGT+GGG | - | chr3.2:56635297-56635316 | None:intergenic | 35.0% | |
| CATTGTACTTCATGAAATCC+TGG | - | chr3.2:56636744-56636763 | None:intergenic | 35.0% | |
| CTGTTACAATTCGTTCTTGT+CGG | + | chr3.2:56637150-56637169 | MS.gene049463:CDS | 35.0% | |
| GAGTTTACCTATAATTGACC+TGG | + | chr3.2:56636205-56636224 | MS.gene049463:intron | 35.0% | |
| GTTTACATTCAGTGAGTATG+AGG | + | chr3.2:56637124-56637143 | MS.gene049463:CDS | 35.0% | |
| GTTTGGTAGAAACTAGACTT+AGG | + | chr3.2:56635067-56635086 | MS.gene049463:intron | 35.0% | |
| TAAGTTCTCCAAGATTGCTT+AGG | + | chr3.2:56635359-56635378 | MS.gene049463:intron | 35.0% | |
| TAGGAGAGTAGTTTAGATAG+AGG | + | chr3.2:56635131-56635150 | MS.gene049463:intron | 35.0% | |
| TATATGAGAAGGCAAAAGCT+TGG | + | chr3.2:56638844-56638863 | MS.gene049463:CDS | 35.0% | |
| TATCTTCTGTGAATGCTTCA+CGG | - | chr3.2:56638196-56638215 | None:intergenic | 35.0% | |
| TGCATGATGATATGATGGTA+GGG | + | chr3.2:56637461-56637480 | MS.gene049463:CDS | 35.0% | |
| TTATCTACTGACATAGGCTT+TGG | + | chr3.2:56635008-56635027 | MS.gene049463:intron | 35.0% | |
| TTGAGCTTATCTACTGACAT+AGG | + | chr3.2:56635002-56635021 | MS.gene049463:intron | 35.0% | |
| TTGTTCGTCGAAGAAGATAT+CGG | - | chr3.2:56634413-56634432 | None:intergenic | 35.0% | |
| ! | ACACTTTTCAGTTGGAAGTT+CGG | + | chr3.2:56636035-56636054 | MS.gene049463:intron | 35.0% |
| ! | ATTTTGTAGGGGTCAAAGTT+AGG | + | chr3.2:56635748-56635767 | MS.gene049463:intron | 35.0% |
| ! | CAATGAGTTGAAGAAAGACA+TGG | + | chr3.2:56635226-56635245 | MS.gene049463:intron | 35.0% |
| ! | GCTTTTAATCTTGTTCGCAA+AGG | + | chr3.2:56638450-56638469 | MS.gene049463:intron | 35.0% |
| ! | TCTTTCTTTTTCTGCCTACT+TGG | + | chr3.2:56636347-56636366 | MS.gene049463:intron | 35.0% |
| !! | CATAGGCTTTGGATATTGTT+TGG | + | chr3.2:56635019-56635038 | MS.gene049463:intron | 35.0% |
| !! | GTTGATTTTCACCAATGCTA+TGG | + | chr3.2:56636377-56636396 | MS.gene049463:intron | 35.0% |
| !! | GTTGTTTTCCTAAGCAATCT+TGG | - | chr3.2:56635370-56635389 | None:intergenic | 35.0% |
| !! | TAGGCTTTGGATATTGTTTG+GGG | + | chr3.2:56635021-56635040 | MS.gene049463:intron | 35.0% |
| !!! | AGGAAGCAAGTTGTTTTAGA+TGG | + | chr3.2:56635768-56635787 | MS.gene049463:CDS | 35.0% |
| AAAAACCCATCACTCAACGT+CGG | + | chr3.2:56634463-56634482 | MS.gene049463:CDS | 40.0% | |
| AAGCAGACACAGAATTAGAC+TGG | - | chr3.2:56637721-56637740 | None:intergenic | 40.0% | |
| ACCTAACATCTGGTTAACAG+AGG | - | chr3.2:56638566-56638585 | None:intergenic | 40.0% | |
| ATGCTATCAACCTGGTAAAC+AGG | - | chr3.2:56637631-56637650 | None:intergenic | 40.0% | |
| ATGGGAATGGAACAGAAATG+AGG | + | chr3.2:56638243-56638262 | MS.gene049463:CDS | 40.0% | |
| ATGTTCCTAGCGCAAAAGAA+TGG | + | chr3.2:56635868-56635887 | MS.gene049463:CDS | 40.0% | |
| CCAAACCTTATCTCACTAAG+TGG | - | chr3.2:56635298-56635317 | None:intergenic | 40.0% | |
| CCACTTAGTGAGATAAGGTT+TGG | + | chr3.2:56635295-56635314 | MS.gene049463:intron | 40.0% | |
| CCAGTTATTATACTGGAGAC+AGG | - | chr3.2:56637105-56637124 | None:intergenic | 40.0% | |
| CCTAACATCTGGTTAACAGA+GGG | - | chr3.2:56638565-56638584 | None:intergenic | 40.0% | |
| CCTGTCTCCAGTATAATAAC+TGG | + | chr3.2:56637102-56637121 | MS.gene049463:intron | 40.0% | |
| CGACAAGAACGAATTGTAAC+AGG | - | chr3.2:56637152-56637171 | None:intergenic | 40.0% | |
| CGAGTAAGGCCTGTTTAAAT+TGG | - | chr3.2:56635651-56635670 | None:intergenic | 40.0% | |
| CTCCTAACTACAACATTCAC+AGG | - | chr3.2:56635117-56635136 | None:intergenic | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr3.2:56635075-56635094 | MS.gene049463:intron | 40.0% | |
| GAATGTCTACGAATAGTTGC+AGG | + | chr3.2:56638808-56638827 | MS.gene049463:CDS | 40.0% | |
| GACCTGTGAATGTTGTAGTT+AGG | + | chr3.2:56635112-56635131 | MS.gene049463:intron | 40.0% | |
| GAGAGTAGTTTAGATAGAGG+GGG | + | chr3.2:56635134-56635153 | MS.gene049463:intron | 40.0% | |
| GAGCTTAGATAAGGAAGAAG+CGG | - | chr3.2:56634515-56634534 | None:intergenic | 40.0% | |
| GATTCAATGGCAATTCCTGA+AGG | + | chr3.2:56636850-56636869 | MS.gene049463:CDS | 40.0% | |
| GCATGATGATATGATGGTAG+GGG | + | chr3.2:56637462-56637481 | MS.gene049463:CDS | 40.0% | |
| GGAGAGTAGTTTAGATAGAG+GGG | + | chr3.2:56635133-56635152 | MS.gene049463:intron | 40.0% | |
| GTTTCCTCGATACAGTTTAG+AGG | + | chr3.2:56637558-56637577 | MS.gene049463:CDS | 40.0% | |
| TAAAGACTTACCGGATGTAC+CGG | + | chr3.2:56637519-56637538 | MS.gene049463:CDS | 40.0% | |
| TAGATGGTCCTGTTAGTTGT+GGG | + | chr3.2:56635784-56635803 | MS.gene049463:CDS | 40.0% | |
| TAGGTAAACTCCAATGACAC+TGG | - | chr3.2:56636196-56636215 | None:intergenic | 40.0% | |
| TCACAAGCGCTTAAATCAGT+AGG | + | chr3.2:56635611-56635630 | MS.gene049463:intron | 40.0% | |
| TGCTATCAACCTGGTAAACA+GGG | - | chr3.2:56637630-56637649 | None:intergenic | 40.0% | |
| TGCTTTCTGCTTACTATTGC+AGG | + | chr3.2:56637417-56637436 | MS.gene049463:intron | 40.0% | |
| TGGGAATGGAACAGAAATGA+GGG | + | chr3.2:56638244-56638263 | MS.gene049463:CDS | 40.0% | |
| TGGTAGAAACTAGACTTAGG+TGG | + | chr3.2:56635070-56635089 | MS.gene049463:intron | 40.0% | |
| TTAGATGGTCCTGTTAGTTG+TGG | + | chr3.2:56635783-56635802 | MS.gene049463:CDS | 40.0% | |
| TTATATGAGCTGGTGAAGAC+TGG | + | chr3.2:56636880-56636899 | MS.gene049463:CDS | 40.0% | |
| TTATTATCGCTGCTTGTAGC+TGG | + | chr3.2:56636165-56636184 | MS.gene049463:intron | 40.0% | |
| TTATTGTGGTTGTGTTCCAG+TGG | + | chr3.2:56638774-56638793 | MS.gene049463:intron | 40.0% | |
| TTCTCTCATTCAACAGCTGT+AGG | + | chr3.2:56637487-56637506 | MS.gene049463:CDS | 40.0% | |
| ! | ACAGGTCAACTGTTTGACTT+TGG | + | chr3.2:56637380-56637399 | MS.gene049463:intron | 40.0% |
| ! | ATTGTGGCATTTTGTCGAAC+AGG | + | chr3.2:56634607-56634626 | MS.gene049463:intron | 40.0% |
| ! | GTTGTTGGTGAGCTTAGATA+AGG | - | chr3.2:56634524-56634543 | None:intergenic | 40.0% |
| ! | TATTGCAGGTGAAGGCTTTT+AGG | + | chr3.2:56637431-56637450 | MS.gene049463:intron | 40.0% |
| ! | TGTTCCAGTGGTAGTGATTA+CGG | + | chr3.2:56638786-56638805 | MS.gene049463:intron | 40.0% |
| !! | AGGCTTTGGATATTGTTTGG+GGG | + | chr3.2:56635022-56635041 | MS.gene049463:intron | 40.0% |
| !! | GGAAAGAGAGCTTTATTACG+TGG | + | chr3.2:56637330-56637349 | MS.gene049463:intron | 40.0% |
| !! | TGTTGGCTTTGTTGGAGATT+TGG | - | chr3.2:56634338-56634357 | None:intergenic | 40.0% |
| !!! | GAGTGATGGGTTTTTTTCGT+CGG | - | chr3.2:56634458-56634477 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGTGGGTTTTGT+GGG | - | chr3.2:56634364-56634383 | None:intergenic | 40.0% |
| !!! | TTGGAAGTTCGGTTTTGAGA+AGG | + | chr3.2:56636046-56636065 | MS.gene049463:intron | 40.0% |
| AAAACCGCACCTTTACCATG+AGG | - | chr3.2:56634862-56634881 | None:intergenic | 45.0% | |
| AACATAGCACGAGCATCTAC+CGG | - | chr3.2:56637541-56637560 | None:intergenic | 45.0% | |
| AACTCCTTCTCCATACCCAT+TGG | - | chr3.2:56634745-56634764 | None:intergenic | 45.0% | |
| AGAAACACCATGACGTCGTT+TGG | + | chr3.2:56635257-56635276 | MS.gene049463:intron | 45.0% | |
| ATGAGAAGGCAAAAGCTTGG+TGG | + | chr3.2:56638847-56638866 | MS.gene049463:CDS | 45.0% | |
| ATGCTCTTCCCACAACTAAC+AGG | - | chr3.2:56635795-56635814 | None:intergenic | 45.0% | |
| CATTCCGTAATCACTACCAC+TGG | - | chr3.2:56638793-56638812 | None:intergenic | 45.0% | |
| CCCTCTGTTAACCAGATGTT+AGG | + | chr3.2:56638562-56638581 | MS.gene049463:intron | 45.0% | |
| CGTGAGGTTAAAGTAAGTGC+AGG | - | chr3.2:56634551-56634570 | None:intergenic | 45.0% | |
| CTAGCTGCCTATATGCGTAT+AGG | - | chr3.2:56636513-56636532 | None:intergenic | 45.0% | |
| CTGCTTACTATTGCAGGTGA+AGG | + | chr3.2:56637423-56637442 | MS.gene049463:intron | 45.0% | |
| CTTATCTCACTAAGTGGGGT+CGG | - | chr3.2:56635292-56635311 | None:intergenic | 45.0% | |
| GAACAAACACATGCAGCTGT+TGG | + | chr3.2:56636907-56636926 | MS.gene049463:CDS | 45.0% | |
| GATCCAATCCCATTAGGTGA+GGG | + | chr3.2:56636799-56636818 | MS.gene049463:CDS | 45.0% | |
| GATGTCTGTCATCGCATGAA+AGG | - | chr3.2:56638278-56638297 | None:intergenic | 45.0% | |
| GCATGGCAGTTCCTTTAAGT+AGG | - | chr3.2:56636770-56636789 | None:intergenic | 45.0% | |
| GCTTCCTCTAAACTGTATCG+AGG | - | chr3.2:56637565-56637584 | None:intergenic | 45.0% | |
| GCTTGCAATGCTTGTTCAGT+GGG | + | chr3.2:56635818-56635837 | MS.gene049463:CDS | 45.0% | |
| GGAATGGAACAGAAATGAGG+GGG | + | chr3.2:56638246-56638265 | MS.gene049463:CDS | 45.0% | |
| GGGAATGGAACAGAAATGAG+GGG | + | chr3.2:56638245-56638264 | MS.gene049463:CDS | 45.0% | |
| GGGTATGGAGAAGGAGTTTA+AGG | + | chr3.2:56634747-56634766 | MS.gene049463:CDS | 45.0% | |
| GGGTCAAATCACTCGAAGTA+GGG | + | chr3.2:56635154-56635173 | MS.gene049463:intron | 45.0% | |
| GGTCAAATCACTCGAAGTAG+GGG | + | chr3.2:56635155-56635174 | MS.gene049463:intron | 45.0% | |
| GTCATGATTATGCAGGCTAG+AGG | + | chr3.2:56636423-56636442 | MS.gene049463:intron | 45.0% | |
| TGATCCAATCCCATTAGGTG+AGG | + | chr3.2:56636798-56636817 | MS.gene049463:CDS | 45.0% | |
| TTACACAGTCCCTGTTTACC+AGG | + | chr3.2:56637618-56637637 | MS.gene049463:intron | 45.0% | |
| TTCGTCGAAGAAGATATCGG+CGG | - | chr3.2:56634410-56634429 | None:intergenic | 45.0% | |
| TTGGAGTGGTAGTTCGTTTG+AGG | + | chr3.2:56636926-56636945 | MS.gene049463:CDS | 45.0% | |
| ! | AGCGCAAAAGAATGGACTCA+TGG | + | chr3.2:56635876-56635895 | MS.gene049463:CDS | 45.0% |
| ! | CACAACATTTGATTCGACGG+AGG | - | chr3.2:56638691-56638710 | None:intergenic | 45.0% |
| ! | CATTTGATTCGACGGAGGAA+AGG | - | chr3.2:56638686-56638705 | None:intergenic | 45.0% |
| ! | GCAAAAGAATGGACTCATGG+AGG | + | chr3.2:56635879-56635898 | MS.gene049463:CDS | 45.0% |
| ! | GCTTGTTCGTCAGAGCTTTT+TGG | + | chr3.2:56634789-56634808 | MS.gene049463:CDS | 45.0% |
| ! | GGTCAACTGTTTGACTTTGG+TGG | + | chr3.2:56637383-56637402 | MS.gene049463:intron | 45.0% |
| ! | GTAAGTGCAGGTATCGTTGT+TGG | - | chr3.2:56634539-56634558 | None:intergenic | 45.0% |
| ! | GTATCCCATAGCTCTGTTTG+CGG | - | chr3.2:56635921-56635940 | None:intergenic | 45.0% |
| ! | TGAGTCCATTCTTTTGCGCT+AGG | - | chr3.2:56635876-56635895 | None:intergenic | 45.0% |
| !! | GTGGGTTTTGTGGGTTTTGT+TGG | - | chr3.2:56634355-56634374 | None:intergenic | 45.0% |
| !!! | GCTTTGTTTTCCAGGAAGGA+GGG | + | chr3.2:56634691-56634710 | MS.gene049463:intron | 45.0% |
| !!! | GGTTTTGGAAGTGGGTTTTG+TGG | - | chr3.2:56634365-56634384 | None:intergenic | 45.0% |
| !!! | GTGGGTTTTGTTGGCTTTGT+TGG | - | chr3.2:56634346-56634365 | None:intergenic | 45.0% |
| !!! | GTTGGCTTTGTTTTCCAGGA+AGG | + | chr3.2:56634687-56634706 | MS.gene049463:intron | 45.0% |
| !!! | TGATGGGTTTTTTTCGTCGG+CGG | - | chr3.2:56634455-56634474 | None:intergenic | 45.0% |
| !!! | TGGATGCTGTTTTGCCTGAA+GGG | + | chr3.2:56634716-56634735 | MS.gene049463:CDS | 45.0% |
| !!! | TGGGTTTTGTGTTTCTGGGT+TGG | + | chr3.2:56634669-56634688 | MS.gene049463:intron | 45.0% |
| !!! | TTGGATGCTGTTTTGCCTGA+AGG | + | chr3.2:56634715-56634734 | MS.gene049463:CDS | 45.0% |
| !!! | TTATTTGTATATTTAATTTT+TGG | + | chr3.2:56636600-56636619 | MS.gene049463:intron | 5.0% |
| AACACATGCAGCTGTTGGAG+TGG | + | chr3.2:56636912-56636931 | MS.gene049463:CDS | 50.0% | |
| ACGTGAACCAAACGACGTCA+TGG | - | chr3.2:56635267-56635286 | None:intergenic | 50.0% | |
| AGCATCCGCAAACAGAGCTA+TGG | + | chr3.2:56635913-56635932 | MS.gene049463:CDS | 50.0% | |
| AGGAAGAAGCGGAAGTGAAG+AGG | - | chr3.2:56634504-56634523 | None:intergenic | 50.0% | |
| ATACCCATTGGCAACCCTTC+AGG | - | chr3.2:56634733-56634752 | None:intergenic | 50.0% | |
| ATGTGGTCGCCTCATGGTAA+AGG | + | chr3.2:56634850-56634869 | MS.gene049463:CDS | 50.0% | |
| CGACCCCACTTAGTGAGATA+AGG | + | chr3.2:56635290-56635309 | MS.gene049463:intron | 50.0% | |
| CGCTTGCAATGCTTGTTCAG+TGG | + | chr3.2:56635817-56635836 | MS.gene049463:CDS | 50.0% | |
| CGTTCTGTTACCAGCATCCT+CGG | + | chr3.2:56636675-56636694 | MS.gene049463:intron | 50.0% | |
| GCATCCGCAAACAGAGCTAT+GGG | + | chr3.2:56635914-56635933 | MS.gene049463:CDS | 50.0% | |
| GCTGGTAACTCCAGTGTCAT+TGG | + | chr3.2:56636183-56636202 | MS.gene049463:intron | 50.0% | |
| GGGGTCAAATCACTCGAAGT+AGG | + | chr3.2:56635153-56635172 | MS.gene049463:intron | 50.0% | |
| GGTTGGAGACGATTGTCTGA+TGG | + | chr3.2:56638868-56638887 | MS.gene049463:CDS | 50.0% | |
| GTTGCCAATGGGTATGGAGA+AGG | + | chr3.2:56634738-56634757 | MS.gene049463:CDS | 50.0% | |
| TGAAGGGTTGCCAATGGGTA+TGG | + | chr3.2:56634732-56634751 | MS.gene049463:CDS | 50.0% | |
| TTACCATGAGGCGACCACAT+TGG | - | chr3.2:56634850-56634869 | None:intergenic | 50.0% | |
| TTACTCTGGGTAATGAGCCG+AGG | - | chr3.2:56636695-56636714 | None:intergenic | 50.0% | |
| TTCAGGGCAGCAGCTTATTG+TGG | + | chr3.2:56638760-56638779 | MS.gene049463:intron | 50.0% | |
| TTGCCTGAAGGGTTGCCAAT+GGG | + | chr3.2:56634727-56634746 | MS.gene049463:CDS | 50.0% | |
| TTTGCCTGAAGGGTTGCCAA+TGG | + | chr3.2:56634726-56634745 | MS.gene049463:CDS | 50.0% | |
| ! | AGGTACAGGCTCTGACTTCA+GGG | + | chr3.2:56638744-56638763 | MS.gene049463:intron | 50.0% |
| ! | CTTTGAGGACATTCTCAGCC+TGG | - | chr3.2:56635950-56635969 | None:intergenic | 50.0% |
| ! | GAAGGCAAAAGCTTGGTGGT+TGG | + | chr3.2:56638851-56638870 | MS.gene049463:CDS | 50.0% |
| ! | GGCTAGAGAAGAAGGTTGGT+TGG | + | chr3.2:56635839-56635858 | MS.gene049463:CDS | 50.0% |
| ! | GTGTTGTTGATCCGCCAATG+TGG | + | chr3.2:56634833-56634852 | MS.gene049463:CDS | 50.0% |
| ! | GTTTTCCAGGAAGGAGGGAT+TGG | + | chr3.2:56634696-56634715 | MS.gene049463:intron | 50.0% |
| !! | AGTGGGCTAGAGAAGAAGGT+TGG | + | chr3.2:56635835-56635854 | MS.gene049463:CDS | 50.0% |
| !! | GTTCAGTGGGCTAGAGAAGA+AGG | + | chr3.2:56635831-56635850 | MS.gene049463:CDS | 50.0% |
| !!! | CTGGGTTGGCTTTGTTTTCC+AGG | + | chr3.2:56634683-56634702 | MS.gene049463:intron | 50.0% |
| !!! | GGCTTTGTTTTCCAGGAAGG+AGG | + | chr3.2:56634690-56634709 | MS.gene049463:intron | 50.0% |
| ACTCCAGCACCCTCACCTAA+TGG | - | chr3.2:56636811-56636830 | None:intergenic | 55.0% | |
| AGCATCCAATCCCTCCTTCC+TGG | - | chr3.2:56634704-56634723 | None:intergenic | 55.0% | |
| AGGACATTCTCAGCCTGGAC+AGG | - | chr3.2:56635945-56635964 | None:intergenic | 55.0% | |
| CGAGCATCTACCGGTACATC+CGG | - | chr3.2:56637532-56637551 | None:intergenic | 55.0% | |
| CTCCAGCACCCTCACCTAAT+GGG | - | chr3.2:56636810-56636829 | None:intergenic | 55.0% | |
| GATTCGACGGAGGAAAGGAG+AGG | - | chr3.2:56638681-56638700 | None:intergenic | 55.0% | |
| GCACCCTCACCTAATGGGAT+TGG | - | chr3.2:56636805-56636824 | None:intergenic | 55.0% | |
| GCTATGGGATACACCTGTCC+AGG | + | chr3.2:56635929-56635948 | MS.gene049463:CDS | 55.0% | |
| GTCGAAGAAGATATCGGCGG+TGG | - | chr3.2:56634407-56634426 | None:intergenic | 55.0% | |
| GTCGCCTCATGGTAAAGGTG+CGG | + | chr3.2:56634855-56634874 | MS.gene049463:intron | 55.0% | |
| ! | AAGCGGAAGTGAAGAGGCGT+CGG | - | chr3.2:56634498-56634517 | None:intergenic | 55.0% |
| ! | ATCCCATTAGGTGAGGGTGC+TGG | + | chr3.2:56636805-56636824 | MS.gene049463:CDS | 55.0% |
| ! | GAGGTACAGGCTCTGACTTC+AGG | + | chr3.2:56638743-56638762 | MS.gene049463:intron | 55.0% |
| !! | TTAGGTGAGGGTGCTGGAGT+TGG | + | chr3.2:56636811-56636830 | MS.gene049463:CDS | 55.0% |
| !!! | GGTTTTTTTCGTCGGCGGTG+AGG | - | chr3.2:56634450-56634469 | None:intergenic | 55.0% |
| !!! | GTGGCAGGGGTTTTGGAAGT+GGG | - | chr3.2:56634373-56634392 | None:intergenic | 55.0% |
| CCATGAGGCGACCACATTGG+CGG | - | chr3.2:56634847-56634866 | None:intergenic | 60.0% | |
| GAAGATATCGGCGGTGGCTG+CGG | - | chr3.2:56634401-56634420 | None:intergenic | 60.0% | |
| GGGTAATGAGCCGAGGATGC+TGG | - | chr3.2:56636688-56636707 | None:intergenic | 60.0% | |
| TCACTCAACGTCGGCCCCAA+TGG | + | chr3.2:56634472-56634491 | MS.gene049463:CDS | 60.0% | |
| TCGACGGAGGAAAGGAGAGG+AGG | - | chr3.2:56638678-56638697 | None:intergenic | 60.0% | |
| TGGGGCCGACGTTGAGTGAT+GGG | - | chr3.2:56634471-56634490 | None:intergenic | 60.0% | |
| TTGGGGCCGACGTTGAGTGA+TGG | - | chr3.2:56634472-56634491 | None:intergenic | 60.0% | |
| TTTCGTCGGCGGTGAGGTTG+CGG | - | chr3.2:56634444-56634463 | None:intergenic | 60.0% | |
| !! | AGTGAAGAGGCGTCGGCCAT+TGG | - | chr3.2:56634491-56634510 | None:intergenic | 60.0% |
| !! | GTGAAGAGGCGTCGGCCATT+GGG | - | chr3.2:56634490-56634509 | None:intergenic | 60.0% |
| !! | GTGAGGGTGCTGGAGTTGGT+TGG | + | chr3.2:56636815-56636834 | MS.gene049463:CDS | 60.0% |
| !! | TGAAGAGGCGTCGGCCATTG+GGG | - | chr3.2:56634489-56634508 | None:intergenic | 60.0% |
| !!! | GGTGGCAGGGGTTTTGGAAG+TGG | - | chr3.2:56634374-56634393 | None:intergenic | 60.0% |
| CCGCCAATGTGGTCGCCTCA+TGG | + | chr3.2:56634844-56634863 | MS.gene049463:CDS | 65.0% | |
| GATATCGGCGGTGGCTGCGG+TGG | - | chr3.2:56634398-56634417 | None:intergenic | 70.0% | |
| !! | GGTGGCGGTGGCAGGGGTTT+TGG | - | chr3.2:56634380-56634399 | None:intergenic | 70.0% |
| ATCGGCGGTGGCTGCGGTGG+CGG | - | chr3.2:56634395-56634414 | None:intergenic | 75.0% | |
| ! | TGGCTGCGGTGGCGGTGGCA+GGG | - | chr3.2:56634387-56634406 | None:intergenic | 75.0% |
| !! | GGCTGCGGTGGCGGTGGCAG+GGG | - | chr3.2:56634386-56634405 | None:intergenic | 80.0% |
| !! | GTGGCTGCGGTGGCGGTGGC+AGG | - | chr3.2:56634388-56634407 | None:intergenic | 80.0% |
| !! | GGCGGTGGCTGCGGTGGCGG+TGG | - | chr3.2:56634392-56634411 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 56634244 | 56638887 | 56634244 | ID=MS.gene049463 |
| chr3.2 | mRNA | 56634244 | 56638887 | 56634244 | ID=MS.gene049463.t1;Parent=MS.gene049463 |
| chr3.2 | exon | 56634244 | 56634569 | 56634244 | ID=MS.gene049463.t1.exon1;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56634244 | 56634569 | 56634244 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56634705 | 56634871 | 56634705 | ID=MS.gene049463.t1.exon2;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56634705 | 56634871 | 56634705 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56635757 | 56635968 | 56635757 | ID=MS.gene049463.t1.exon3;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56635757 | 56635968 | 56635757 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56636745 | 56636999 | 56636745 | ID=MS.gene049463.t1.exon4;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56636745 | 56636999 | 56636745 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56637113 | 56637199 | 56637113 | ID=MS.gene049463.t1.exon5;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56637113 | 56637199 | 56637113 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56637439 | 56637611 | 56637439 | ID=MS.gene049463.t1.exon6;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56637439 | 56637611 | 56637439 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56638178 | 56638267 | 56638178 | ID=MS.gene049463.t1.exon7;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56638178 | 56638267 | 56638178 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| chr3.2 | exon | 56638794 | 56638887 | 56638794 | ID=MS.gene049463.t1.exon8;Parent=MS.gene049463.t1 |
| chr3.2 | CDS | 56638794 | 56638887 | 56638794 | ID=cds.MS.gene049463.t1;Parent=MS.gene049463.t1 |
| Gene Sequence |
| Protein sequence |
