Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77531.t1 | RHN69172.1 | 98.7 | 1316 | 17 | 0 | 1 | 1316 | 1 | 1316 | 0.00E+00 | 2167.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77531.t1 | Q9SL02 | 62.3 | 1316 | 496 | 0 | 1 | 1316 | 1 | 1316 | 0.0e+00 | 1484.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77531.t1 | A0A396IUE8 | 98.7 | 1316 | 17 | 0 | 1 | 1316 | 1 | 1316 | 0.0e+00 | 2167.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene77531 | 0.885751 | 6.20E-72 | -1.69E-46 |
| MS.gene049418 | MS.gene77531 | 0.843687 | 1.20E-58 | -1.69E-46 |
| MS.gene049463 | MS.gene77531 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene77531 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene77531 | 0.83437 | 3.12E-56 | -1.69E-46 |
| MS.gene050630 | MS.gene77531 | 0.817668 | 2.93E-52 | -1.69E-46 |
| MS.gene051021 | MS.gene77531 | 0.862034 | 6.74E-64 | -1.69E-46 |
| MS.gene051248 | MS.gene77531 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene77531 | 0.840522 | 8.27E-58 | -1.69E-46 |
| MS.gene05157 | MS.gene77531 | 0.824914 | 6.23E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene77531 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene77531 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene77531 | 0.838871 | 2.22E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene77531 | 0.828506 | 8.66E-55 | -1.69E-46 |
| MS.gene052731 | MS.gene77531 | 0.801046 | 1.08E-48 | -1.69E-46 |
| MS.gene052732 | MS.gene77531 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene77531 | 0.865797 | 4.55E-65 | -1.69E-46 |
| MS.gene053171 | MS.gene77531 | 0.812648 | 3.81E-51 | -1.69E-46 |
| MS.gene053174 | MS.gene77531 | 0.805778 | 1.13E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene77531 | 0.815382 | 9.51E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene77531 | 0.808514 | 2.98E-50 | -1.69E-46 |
| MS.gene053538 | MS.gene77531 | 0.808527 | 2.96E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene77531 | 0.809827 | 1.56E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene77531 | 0.81288 | 3.39E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene77531 | 0.886638 | 2.87E-72 | -1.69E-46 |
| MS.gene055465 | MS.gene77531 | 0.829953 | 3.86E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene77531 | 0.810234 | 1.28E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene77531 | 0.864811 | 9.29E-65 | -1.69E-46 |
| MS.gene055580 | MS.gene77531 | -0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene055781 | MS.gene77531 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene055890 | MS.gene77531 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene77531 | 0.805154 | 1.53E-49 | -1.69E-46 |
| MS.gene056169 | MS.gene77531 | 0.861569 | 9.36E-64 | -1.69E-46 |
| MS.gene056228 | MS.gene77531 | 0.884397 | 1.99E-71 | -1.69E-46 |
| MS.gene056507 | MS.gene77531 | 0.809796 | 1.58E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene77531 | 0.808548 | 2.93E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene77531 | 0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene058198 | MS.gene77531 | 0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene77531 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene77531 | 0.829149 | 6.05E-55 | -1.69E-46 |
| MS.gene05894 | MS.gene77531 | 0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene059015 | MS.gene77531 | 0.801574 | 8.44E-49 | -1.69E-46 |
| MS.gene059154 | MS.gene77531 | 0.855097 | 7.93E-62 | -1.69E-46 |
| MS.gene059300 | MS.gene77531 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene059424 | MS.gene77531 | 0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene77531 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene77531 | 0.83331 | 5.74E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene77531 | 0.830223 | 3.31E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77531.t1 | MTR_3g084300 | 99.088 | 1316 | 7 | 1 | 1 | 1316 | 1 | 1311 | 0.0 | 2656 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77531.t1 | AT2G31970 | 69.149 | 1316 | 406 | 0 | 1 | 1316 | 1 | 1316 | 0.0 | 1816 |
Find 234 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATCCAAGCTTCAATCTT+TGG | 0.195557 | 3.2:+72597882 | MS.gene77531:CDS |
| GGATGAGCCAACCACAAATT+TGG | 0.220272 | 3.2:+72602118 | MS.gene77531:CDS |
| GCCTGTCCTGGGATAATTTC+TGG | 0.229131 | 3.2:-72600117 | None:intergenic |
| CCAGCTCTTCCTTGACTTGC+TGG | 0.240650 | 3.2:-72598470 | None:intergenic |
| CTTGTGTGATTTCCTTCTTC+AGG | 0.246655 | 3.2:-72593726 | None:intergenic |
| AAAATAAGAAGGGTGCTAAA+AGG | 0.255734 | 3.2:+72593682 | MS.gene77531:CDS |
| GGGTGTTTCGAAGGCCATTT+TGG | 0.258894 | 3.2:+72586592 | MS.gene77531:CDS |
| CTTATCTATGTCCTTGTATT+GGG | 0.266744 | 3.2:-72600773 | None:intergenic |
| GCGATTCCACACAATGAAAA+TGG | 0.287037 | 3.2:+72601613 | MS.gene77531:CDS |
| ATCTCTTATGAAGGGAGATT+TGG | 0.290588 | 3.2:+72593540 | MS.gene77531:CDS |
| GCTTATCTATGTCCTTGTAT+TGG | 0.303062 | 3.2:-72600774 | None:intergenic |
| TCTTCTATAGTCCTCACTTC+TGG | 0.306645 | 3.2:-72598850 | None:intergenic |
| GAAGGATCTTGAAGATAAAA+AGG | 0.307260 | 3.2:+72589596 | MS.gene77531:CDS |
| TTCATCAAGATGAAGCAAAT+TGG | 0.311987 | 3.2:+72586630 | MS.gene77531:CDS |
| TCTGAAAGATGCGGCTTATA+CGG | 0.315101 | 3.2:+72587021 | MS.gene77531:CDS |
| GGATGGAAGCATTAAAGATT+TGG | 0.330227 | 3.2:+72588858 | MS.gene77531:CDS |
| CAGAACGAAGCACTCTATTT+AGG | 0.336357 | 3.2:+72588956 | MS.gene77531:CDS |
| GCAGCCAGACTTTCAGCATT+TGG | 0.345546 | 3.2:-72602146 | None:intergenic |
| AGGAAATCACACAAGCATTA+AGG | 0.346359 | 3.2:+72593734 | MS.gene77531:CDS |
| TGACCACGAGTTTGAGAATC+TGG | 0.349229 | 3.2:+72599669 | MS.gene77531:CDS |
| TGACCAGCTTATCCAGCTTA+AGG | 0.354575 | 3.2:+72600804 | MS.gene77531:CDS |
| GGGACCGACGATTAGGGTTA+AGG | 0.355058 | 3.2:-72585640 | None:intergenic |
| TCAGCACTGAAGGGTGGCTT+TGG | 0.357124 | 3.2:-72589522 | None:intergenic |
| AATCGATTCCAGAGCCTTGC+TGG | 0.358585 | 3.2:-72597906 | None:intergenic |
| GATGGATGAGCAGAGGAATA+TGG | 0.361544 | 3.2:+72599054 | MS.gene77531:CDS |
| CACCGTTGGGACCGACGATT+AGG | 0.363115 | 3.2:-72585647 | None:intergenic |
| CAGAGTCTGACTGAAGCCTT+TGG | 0.365798 | 3.2:+72599586 | MS.gene77531:intron |
| TTATCTTTGCGCTTGGATAA+AGG | 0.366541 | 3.2:-72599610 | None:intergenic |
| TTCGCTTCACTGAAGGTTGC+GGG | 0.369897 | 3.2:+72585928 | MS.gene77531:intron |
| ATTGGAGCTCGTTGCATTGC+AGG | 0.370530 | 3.2:+72598879 | MS.gene77531:CDS |
| CTTAATCTGTCCCTTCGTTT+CGG | 0.374062 | 3.2:-72585956 | None:intergenic |
| AAAGACTTACAAGCTGAAAC+TGG | 0.374719 | 3.2:+72586985 | MS.gene77531:CDS |
| TACCCGATCCTACAGTTATA+AGG | 0.377263 | 3.2:+72601733 | MS.gene77531:CDS |
| CTGGGATAATTTCTGGTGTT+CGG | 0.387310 | 3.2:-72600110 | None:intergenic |
| CAAACTATTAATCCTCATTC+CGG | 0.387489 | 3.2:+72586084 | MS.gene77531:CDS |
| ACTAACATGACATATCCTTT+TGG | 0.390538 | 3.2:-72594814 | None:intergenic |
| AGACGAGAGAGAAAGAGAAT+TGG | 0.393062 | 3.2:+72593259 | MS.gene77531:CDS |
| GGACAGGCAGAGGCTTCTTT+CGG | 0.397159 | 3.2:+72600132 | MS.gene77531:CDS |
| CATCATACGGTTGGCTTTAG+CGG | 0.398104 | 3.2:+72602061 | MS.gene77531:CDS |
| TAAAACATTGAAACATTTGC+TGG | 0.399701 | 3.2:+72588903 | MS.gene77531:CDS |
| GGACCGACGATTAGGGTTAA+GGG | 0.401101 | 3.2:-72585639 | None:intergenic |
| TTCTTTACAGACAACTGAAA+TGG | 0.401699 | 3.2:+72600915 | MS.gene77531:intron |
| AAAGAAGCCTCTGCCTGTCC+TGG | 0.402949 | 3.2:-72600129 | None:intergenic |
| GTGATGACGTTCTTGTTCTC+CGG | 0.413708 | 3.2:-72585606 | None:intergenic |
| GAAACATTTGCTGGAGCTAA+AGG | 0.414723 | 3.2:+72588912 | MS.gene77531:CDS |
| TTGCTGTGAGCGTTCTTTCT+CGG | 0.416564 | 3.2:+72598175 | MS.gene77531:CDS |
| GATAATATCTCTCCGCATGC+TGG | 0.418577 | 3.2:-72602354 | None:intergenic |
| TTTGCAAAGTTTGAATTTCG+AGG | 0.419600 | 3.2:-72598786 | None:intergenic |
| AAACATTTGCTGGAGCTAAA+GGG | 0.420145 | 3.2:+72588913 | MS.gene77531:CDS |
| AATATGGATACTGATATATC+AGG | 0.422969 | 3.2:+72599070 | MS.gene77531:CDS |
| TCGAGAGATTCCTGCGCTCA+TGG | 0.424086 | 3.2:+72586571 | MS.gene77531:CDS |
| CCTTCTCATCAAGATCAACT+TGG | 0.427850 | 3.2:-72599204 | None:intergenic |
| AGTTGGAGAAGCTTCGTATA+TGG | 0.428659 | 3.2:+72598391 | MS.gene77531:CDS |
| GATTCCATCAACTCCTCATC+AGG | 0.429278 | 3.2:-72589189 | None:intergenic |
| AATCGTGTAAAATCAAGGTT+GGG | 0.429532 | 3.2:+72589564 | MS.gene77531:CDS |
| AGACCATCGATAACTCCATC+TGG | 0.430893 | 3.2:+72589313 | MS.gene77531:CDS |
| CGGTCCAAATGCTGAAAGTC+TGG | 0.431082 | 3.2:+72602142 | MS.gene77531:CDS |
| ATCTATAATTTCCTGCATCC+TGG | 0.432798 | 3.2:-72599918 | None:intergenic |
| TGTTCTCCGGGTCGAAACTC+CGG | 0.437908 | 3.2:-72585593 | None:intergenic |
| GACTATAGAAGAAATTCAAT+TGG | 0.440055 | 3.2:+72598861 | MS.gene77531:CDS |
| TACTGAGTTGACGAATTTGA+TGG | 0.440214 | 3.2:+72599036 | MS.gene77531:CDS |
| TACCTTCGTGACAGTTAAAC+AGG | 0.442230 | 3.2:+72600686 | MS.gene77531:intron |
| TCTTTGGACCAGCAAGGCTC+TGG | 0.443969 | 3.2:+72597898 | MS.gene77531:CDS |
| GACAATCCCCAATGCTGAAA+AGG | 0.445333 | 3.2:+72598443 | MS.gene77531:CDS |
| TTAGAAAGTGAGCTTGGTTG+TGG | 0.445491 | 3.2:+72598823 | MS.gene77531:CDS |
| GAGGATTTAGAAAGTGAGCT+TGG | 0.448238 | 3.2:+72598817 | MS.gene77531:CDS |
| CTGTGACCAGACCTAGCATT+AGG | 0.448470 | 3.2:-72585802 | None:intergenic |
| TGATTACATCATCAAGTGCC+TGG | 0.450118 | 3.2:-72598503 | None:intergenic |
| AGAACCTGATGAGGAGTTGA+TGG | 0.454055 | 3.2:+72589185 | MS.gene77531:intron |
| TAGGGTTAAGGGTTTGAAGA+AGG | 0.454499 | 3.2:-72585628 | None:intergenic |
| ATTTGGACCGTCCAAATTTG+TGG | 0.456117 | 3.2:-72602129 | None:intergenic |
| AAATAAGAAGGGTGCTAAAA+GGG | 0.457318 | 3.2:+72593683 | MS.gene77531:CDS |
| TGCGCTCATGGGTGTTTCGA+AGG | 0.462259 | 3.2:+72586583 | MS.gene77531:CDS |
| CTGGTCCAAAGATTGAAGCT+TGG | 0.467024 | 3.2:-72597887 | None:intergenic |
| GCACAGTATAATCGAATCTC+AGG | 0.468434 | 3.2:+72602508 | MS.gene77531:CDS |
| AACTTCTTCTTTAACGTGGA+AGG | 0.469089 | 3.2:-72586665 | None:intergenic |
| GACCTTGAGGAGGAGTTTGA+AGG | 0.472709 | 3.2:+72589000 | MS.gene77531:CDS |
| GAAGAAAATATGTTGAAGAT+TGG | 0.472939 | 3.2:+72600067 | MS.gene77531:CDS |
| CAAAGCATCCTCAGCACTGA+AGG | 0.480099 | 3.2:-72589532 | None:intergenic |
| TAACTTATCTAAACACCAAA+AGG | 0.480117 | 3.2:+72594799 | MS.gene77531:CDS |
| ATGAGAGGAAGATGTAGTGC+AGG | 0.481825 | 3.2:+72601882 | MS.gene77531:CDS |
| TGCTTAAAGCTTTCTTGCAC+CGG | 0.481962 | 3.2:+72585769 | MS.gene77531:CDS |
| ATACCTTAAGCTGGATAAGC+TGG | 0.485539 | 3.2:-72600807 | None:intergenic |
| ATGCTTGCAGCAAATTCGTC+TGG | 0.485767 | 3.2:+72593369 | MS.gene77531:intron |
| AGGGAGGATTCCTTCTGATA+AGG | 0.485776 | 3.2:+72593702 | MS.gene77531:CDS |
| ACTTAAATGCAAATGAAAGT+TGG | 0.485931 | 3.2:+72593029 | MS.gene77531:CDS |
| TGATGACGTTCTTGTTCTCC+GGG | 0.487340 | 3.2:-72585605 | None:intergenic |
| GGATCGGGTACCACCACCTT+CGG | 0.488070 | 3.2:-72601720 | None:intergenic |
| CGAGAGATTCCTGCGCTCAT+GGG | 0.488137 | 3.2:+72586572 | MS.gene77531:CDS |
| GCTCTTGCAACCCTTTCAAA+AGG | 0.489126 | 3.2:-72598137 | None:intergenic |
| ACCGTTGGGACCGACGATTA+GGG | 0.491248 | 3.2:-72585646 | None:intergenic |
| AGAAAAGAGATGTACAGAAA+AGG | 0.495584 | 3.2:+72597959 | MS.gene77531:CDS |
| ATCGTCGGTCCCAACGGTGC+CGG | 0.495884 | 3.2:+72585651 | MS.gene77531:CDS |
| TCGATGGTCTTCTTGAGGAC+AGG | 0.496469 | 3.2:-72589300 | None:intergenic |
| CAATTGTGGAATTCTTGCAT+TGG | 0.496655 | 3.2:+72602097 | MS.gene77531:CDS |
| CTCCGGTTCAAAACCGCTGC+CGG | 0.497097 | 3.2:+72585979 | MS.gene77531:CDS |
| ATCCTTGTTATGCAGGATCA+TGG | 0.498228 | 3.2:+72602252 | MS.gene77531:intron |
| TAATCGTGTAAAATCAAGGT+TGG | 0.498249 | 3.2:+72589563 | MS.gene77531:CDS |
| AGACAGGTTGAAGGAGCTGC+AGG | 0.503868 | 3.2:+72599853 | MS.gene77531:CDS |
| ACTTCTTCTTTAACGTGGAA+GGG | 0.504784 | 3.2:-72586664 | None:intergenic |
| GTAGAGACGTGGTTTGCATA+AGG | 0.505155 | 3.2:+72586001 | MS.gene77531:CDS |
| AAAGAAAGGAGACAGGTTGA+AGG | 0.507362 | 3.2:+72599844 | MS.gene77531:CDS |
| TCACTAATCGTGTAAAATCA+AGG | 0.509390 | 3.2:+72589559 | MS.gene77531:CDS |
| TTCTTCAGGTCCTTATCAGA+AGG | 0.509999 | 3.2:-72593712 | None:intergenic |
| TACAATGGCTACTGATTCAA+AGG | 0.511814 | 3.2:+72593504 | MS.gene77531:CDS |
| CCAGCAAGTCAAGGAAGAGC+TGG | 0.515756 | 3.2:+72598470 | MS.gene77531:CDS |
| TTACCTCCTAATGCTAGGTC+TGG | 0.517145 | 3.2:+72585796 | MS.gene77531:CDS |
| GGACCGTCCAAATTTGTGGT+TGG | 0.519912 | 3.2:-72602125 | None:intergenic |
| AACTGCAAAGTTGCGAAACC+AGG | 0.521209 | 3.2:+72599900 | MS.gene77531:CDS |
| CACCACATTATACCTTAAGC+TGG | 0.521804 | 3.2:-72600816 | None:intergenic |
| TTGTGGCAACAGACTTATAG+AGG | 0.523323 | 3.2:+72601662 | MS.gene77531:CDS |
| ACCCTAATCGTCGGTCCCAA+CGG | 0.524311 | 3.2:+72585645 | MS.gene77531:CDS |
| AAACCTTATAACTGTAGGAT+CGG | 0.524478 | 3.2:-72601736 | None:intergenic |
| TAGCTTGCTGATCTCCCAGA+TGG | 0.524768 | 3.2:-72589328 | None:intergenic |
| AGATGCTGATCAAAGGCATC+CGG | 0.530517 | 3.2:+72585574 | MS.gene77531:CDS |
| ACAAACACAAATAAGCAAGT+TGG | 0.531132 | 3.2:+72589245 | MS.gene77531:CDS |
| CATTCTGATTCCGAAGGTGG+TGG | 0.531974 | 3.2:+72601710 | MS.gene77531:CDS |
| AAGTTGCGAAACCAGGATGC+AGG | 0.533607 | 3.2:+72599907 | MS.gene77531:CDS |
| GATCAGATACAGCAGTTGGA+TGG | 0.534765 | 3.2:+72588841 | MS.gene77531:CDS |
| GTGCATTGTAGTATCTGTCC+AGG | 0.535052 | 3.2:-72600948 | None:intergenic |
| TTATAGATGAACTAGACAAA+AGG | 0.537241 | 3.2:+72599933 | MS.gene77531:CDS |
| AAGATGTAGTGCAGGACAGA+AGG | 0.540905 | 3.2:+72601890 | MS.gene77531:CDS |
| AACCTTATAACTGTAGGATC+GGG | 0.541554 | 3.2:-72601735 | None:intergenic |
| TTCGAAACACCCATGAGCGC+AGG | 0.542108 | 3.2:-72586581 | None:intergenic |
| TTCTGATAAGGACCTGAAGA+AGG | 0.542753 | 3.2:+72593714 | MS.gene77531:CDS |
| TCTTAAGCAGGCCCAATACA+AGG | 0.544643 | 3.2:+72600762 | MS.gene77531:CDS |
| TGACAAGGAGTTGGTTGAGC+CGG | 0.545549 | 3.2:+72598729 | MS.gene77531:CDS |
| GAAAGTGAGCTTGGTTGTGG+AGG | 0.546111 | 3.2:+72598826 | MS.gene77531:CDS |
| AGAAAGAACGCTCACAGCAA+GGG | 0.547047 | 3.2:-72598172 | None:intergenic |
| AAAAGATCAGATACAGCAGT+TGG | 0.547994 | 3.2:+72588837 | MS.gene77531:CDS |
| TATGCAAACCACGTCTCTAC+CGG | 0.549096 | 3.2:-72585998 | None:intergenic |
| GGCATCTCTCATCATACGGT+TGG | 0.549446 | 3.2:+72602052 | MS.gene77531:CDS |
| ACATTTGAAAATTCTTGCTG+TGG | 0.549787 | 3.2:+72598338 | MS.gene77531:CDS |
| AGGTACTCTAACTCAAAGAA+AGG | 0.549818 | 3.2:+72599830 | MS.gene77531:intron |
| ATTCATTCTGATTCCGAAGG+TGG | 0.550830 | 3.2:+72601707 | MS.gene77531:CDS |
| ATGCAAGAATTCCACAATTG+AGG | 0.551543 | 3.2:-72602094 | None:intergenic |
| ACACTGAACTCAAGATGGCA+TGG | 0.552021 | 3.2:+72592999 | MS.gene77531:CDS |
| AGTGATACCTCGCCGGAATG+AGG | 0.552135 | 3.2:-72586096 | None:intergenic |
| AAATAAGATTGATCTTAAGC+AGG | 0.552984 | 3.2:+72600750 | MS.gene77531:CDS |
| TACTGGCATCTCTCATCATA+CGG | 0.554024 | 3.2:+72602048 | MS.gene77531:CDS |
| TTGGAGCTCGTTGCATTGCA+GGG | 0.555173 | 3.2:+72598880 | MS.gene77531:CDS |
| AATTATCCCAGGACAGGCAG+AGG | 0.556649 | 3.2:+72600122 | MS.gene77531:CDS |
| ATCGTGTAAAATCAAGGTTG+GGG | 0.557025 | 3.2:+72589565 | MS.gene77531:CDS |
| AAGAAGCCTCTGCCTGTCCT+GGG | 0.558476 | 3.2:-72600128 | None:intergenic |
| TAGCTATAGATGTGCTGACA+TGG | 0.559191 | 3.2:+72586547 | MS.gene77531:CDS |
| AACCACGTCTCTACCGGCAG+CGG | 0.559352 | 3.2:-72585992 | None:intergenic |
| GCGCTTGGATAAAGGTCCAA+AGG | 0.563340 | 3.2:-72599602 | None:intergenic |
| AAATAACACTGAACTCAAGA+TGG | 0.563459 | 3.2:+72592994 | MS.gene77531:CDS |
| CATGGAGGACAGGAAAGGCC+AGG | 0.565053 | 3.2:+72602270 | MS.gene77531:CDS |
| AGCAAATATAACATTGCAGA+TGG | 0.567660 | 3.2:+72598095 | MS.gene77531:intron |
| AACATTTGCTGGAGCTAAAG+GGG | 0.569155 | 3.2:+72588914 | MS.gene77531:CDS |
| ACCAGAAATTATCCCAGGAC+AGG | 0.569225 | 3.2:+72600116 | MS.gene77531:CDS |
| AGTATTCATTCTGATTCCGA+AGG | 0.570105 | 3.2:+72601704 | MS.gene77531:CDS |
| TATGCAGGATCATGGAGGAC+AGG | 0.570216 | 3.2:+72602260 | MS.gene77531:intron |
| GCAACAGACTTATAGAGGAC+AGG | 0.572063 | 3.2:+72601667 | MS.gene77531:CDS |
| CAGGCAGAGGCTTCTTTCGG+AGG | 0.572534 | 3.2:+72600135 | MS.gene77531:CDS |
| GATTACATCATCAAGTGCCT+GGG | 0.574783 | 3.2:-72598502 | None:intergenic |
| CGAAAATAAAGCCCTTAATG+TGG | 0.575676 | 3.2:+72593447 | MS.gene77531:CDS |
| TGTTCAACATATTTCACCAC+CGG | 0.577672 | 3.2:-72598748 | None:intergenic |
| CAGATACACAAAGGCACTTG+AGG | 0.579073 | 3.2:+72586925 | MS.gene77531:intron |
| AATCACGGTTGCAGAATGCA+AGG | 0.579439 | 3.2:+72599098 | MS.gene77531:CDS |
| GTGAGTTACCTCCTAATGCT+AGG | 0.580225 | 3.2:+72585791 | MS.gene77531:CDS |
| GTCTGGCTGCGGCTATCCTG+AGG | 0.580685 | 3.2:+72602159 | MS.gene77531:CDS |
| CAACCAGATTCTCAAACTCG+TGG | 0.581086 | 3.2:-72599672 | None:intergenic |
| AGAATATGTTAAACTTAGCA+AGG | 0.582751 | 3.2:+72598419 | MS.gene77531:CDS |
| GAGAAAGAACGCTCACAGCA+AGG | 0.583398 | 3.2:-72598173 | None:intergenic |
| CTTCAATCTTTGGACCAGCA+AGG | 0.583682 | 3.2:+72597892 | MS.gene77531:CDS |
| TGCAGCAAATTCGTCTGGAG+GGG | 0.586209 | 3.2:+72593374 | MS.gene77531:intron |
| TAAGAAGGGTGCTAAAAGGG+AGG | 0.586867 | 3.2:+72593686 | MS.gene77531:CDS |
| TTGCAGCAAATTCGTCTGGA+GGG | 0.589663 | 3.2:+72593373 | MS.gene77531:intron |
| TTCAAACTCCTCCTCAAGGT+CGG | 0.589692 | 3.2:-72588998 | None:intergenic |
| GTCGACAAGATGCTGATCAA+AGG | 0.589698 | 3.2:+72585567 | MS.gene77531:CDS |
| AGGCATCCGGAGTTTCGACC+CGG | 0.592178 | 3.2:+72585587 | MS.gene77531:CDS |
| CACTGAACTCAAGATGGCAT+GGG | 0.592682 | 3.2:+72593000 | MS.gene77531:CDS |
| CTAACTCAAAGAAAGGAGAC+AGG | 0.593565 | 3.2:+72599837 | MS.gene77531:CDS |
| AACGTGGAAGGGTCTTGAAG+TGG | 0.594774 | 3.2:-72586653 | None:intergenic |
| ATGGCAAACCTTATAACTGT+AGG | 0.597534 | 3.2:-72601741 | None:intergenic |
| CTCCCAGATGGAGTTATCGA+TGG | 0.597692 | 3.2:-72589316 | None:intergenic |
| GACCATCGATAACTCCATCT+GGG | 0.597732 | 3.2:+72589314 | MS.gene77531:CDS |
| CGAATTTGATGGATGAGCAG+AGG | 0.597782 | 3.2:+72599047 | MS.gene77531:CDS |
| GGACGCTAAAATTGATCATG+TGG | 0.597893 | 3.2:+72588879 | MS.gene77531:CDS |
| AGTGAAGACTGACAAGGAGT+TGG | 0.598043 | 3.2:+72598720 | MS.gene77531:CDS |
| CTTCTCATCAAGATCAACTT+GGG | 0.600285 | 3.2:-72599203 | None:intergenic |
| CCAAGTTGATCTTGATGAGA+AGG | 0.601866 | 3.2:+72599204 | MS.gene77531:CDS |
| CAAGGAGTTGGTTGAGCCGG+TGG | 0.602126 | 3.2:+72598732 | MS.gene77531:CDS |
| GATTGGTCAGCGCCAGCATG+CGG | 0.603404 | 3.2:+72602342 | MS.gene77531:CDS |
| AGACTCTGATTATCAGCAGT+TGG | 0.605534 | 3.2:+72598374 | MS.gene77531:CDS |
| AGAGCTGGATCACAAATCCC+AGG | 0.606303 | 3.2:+72598485 | MS.gene77531:CDS |
| AGTTATCGATGGTCTTCTTG+AGG | 0.606694 | 3.2:-72589305 | None:intergenic |
| GCATCCTCAGCACTGAAGGG+TGG | 0.608278 | 3.2:-72589528 | None:intergenic |
| TTAATCACAGCAAAGAGGGA+AGG | 0.609678 | 3.2:+72598299 | MS.gene77531:intron |
| ATCAAACTTCTTCTTTAACG+TGG | 0.610212 | 3.2:-72586669 | None:intergenic |
| ACAAAATTATAAGAGAATTG+TGG | 0.610414 | 3.2:+72601645 | MS.gene77531:CDS |
| AACTTTGCAAAAGAAAGTTG+AGG | 0.611565 | 3.2:+72598798 | MS.gene77531:CDS |
| ATACAGGTTCTCATGCAGAC+TGG | 0.612239 | 3.2:+72601843 | MS.gene77531:intron |
| TCTTCAAACTCTGAAAGATG+CGG | 0.614509 | 3.2:+72587012 | MS.gene77531:CDS |
| CGAAGGGACAGATTAAGCTC+CGG | 0.615621 | 3.2:+72585962 | MS.gene77531:CDS |
| CGAACACCAGAAATTATCCC+AGG | 0.616060 | 3.2:+72600111 | MS.gene77531:CDS |
| TGCAGGCTCACATGTCTCTG+AGG | 0.618854 | 3.2:+72589442 | MS.gene77531:intron |
| ATATTTATTAGAACCTGATG+AGG | 0.621136 | 3.2:+72589176 | MS.gene77531:intron |
| AAAGGAACTCCAGCAAGTCA+AGG | 0.621494 | 3.2:+72598461 | MS.gene77531:CDS |
| CAATCGAGAGATGCTTACAA+TGG | 0.621502 | 3.2:+72593489 | MS.gene77531:CDS |
| GATGCTGAGTTAGAAATGAG+AGG | 0.622381 | 3.2:+72601867 | MS.gene77531:CDS |
| CTTGCAGCAAATTCGTCTGG+AGG | 0.623052 | 3.2:+72593372 | MS.gene77531:intron |
| TGAAATGGCAAACAAAGACC+TGG | 0.623587 | 3.2:+72600930 | MS.gene77531:CDS |
| CACCTTCAAACTCCTCCTCA+AGG | 0.624156 | 3.2:-72589002 | None:intergenic |
| AACCGCTGCCGGTAGAGACG+TGG | 0.628955 | 3.2:+72585990 | MS.gene77531:CDS |
| GAAGCAATATTCCGACCTTG+AGG | 0.629350 | 3.2:+72588987 | MS.gene77531:CDS |
| ATATATCAGGTATTCAATCA+CGG | 0.630373 | 3.2:+72599083 | MS.gene77531:CDS |
| TGCGGGAGAAACCGAAACGA+AGG | 0.631254 | 3.2:+72585945 | MS.gene77531:CDS |
| TAAGTATCGAGAAGCTGACA+AGG | 0.632404 | 3.2:+72594736 | MS.gene77531:CDS |
| AAAGCCACCCTTCAGTGCTG+AGG | 0.638736 | 3.2:+72589524 | MS.gene77531:CDS |
| GCAATATTCCGACCTTGAGG+AGG | 0.639352 | 3.2:+72588990 | MS.gene77531:CDS |
| GAGCCAACCACAAATTTGGA+CGG | 0.640463 | 3.2:+72602122 | MS.gene77531:CDS |
| AGGATCATGGAGGACAGGAA+AGG | 0.641225 | 3.2:+72602265 | MS.gene77531:intron |
| AAATGCTGAAAGTCTGGCTG+CGG | 0.641502 | 3.2:+72602148 | MS.gene77531:CDS |
| ATCACGGTTGCAGAATGCAA+GGG | 0.643434 | 3.2:+72599099 | MS.gene77531:CDS |
| CAGCTTCATTCACGACCCCA+AGG | 0.645705 | 3.2:+72585822 | MS.gene77531:CDS |
| TGACAGTTAAACAGGTGCAA+AGG | 0.647336 | 3.2:+72600694 | MS.gene77531:intron |
| TTAGAAGAGTGATACCTCGC+CGG | 0.648711 | 3.2:-72586103 | None:intergenic |
| TGACCAGACCTAGCATTAGG+AGG | 0.650160 | 3.2:-72585799 | None:intergenic |
| AAAGCATCCTCAGCACTGAA+GGG | 0.652918 | 3.2:-72589531 | None:intergenic |
| GTTGTGGAGGACCAGAAGTG+AGG | 0.655223 | 3.2:+72598839 | MS.gene77531:CDS |
| ACAAACTAAGAGAGAGCACA+AGG | 0.666140 | 3.2:+72593072 | MS.gene77531:CDS |
| AAACCCTTAACCCTAATCGT+CGG | 0.673783 | 3.2:+72585636 | MS.gene77531:CDS |
| TCGTGTAAAATCAAGGTTGG+GGG | 0.676575 | 3.2:+72589566 | MS.gene77531:CDS |
| AGCATTAGGAGGTAACTCAC+CGG | 0.679949 | 3.2:-72585788 | None:intergenic |
| GCGGGAGAAACCGAAACGAA+GGG | 0.681553 | 3.2:+72585946 | MS.gene77531:CDS |
| GGTTATAAAGAAACTTCACA+AGG | 0.683172 | 3.2:+72586946 | MS.gene77531:CDS |
| AGCTCAAGTGAAGACTGACA+AGG | 0.685303 | 3.2:+72598714 | MS.gene77531:CDS |
| TATTAATCCTCATTCCGGCG+AGG | 0.712892 | 3.2:+72586089 | MS.gene77531:CDS |
| TGTACTGAGCAGATACACAA+AGG | 0.715032 | 3.2:+72586916 | MS.gene77531:intron |
| GCTTCGGGAAAACATCACAC+AGG | 0.717999 | 3.2:+72588792 | MS.gene77531:intron |
| CTTGTTATGCAGGATCATGG+AGG | 0.720846 | 3.2:+72602255 | MS.gene77531:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 72585558 | 72602544 | 72585558 | ID=MS.gene77531 |
| chr3.2 | mRNA | 72585558 | 72602544 | 72585558 | ID=MS.gene77531.t1;Parent=MS.gene77531 |
| chr3.2 | exon | 72585558 | 72585680 | 72585558 | ID=MS.gene77531.t1.exon1;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72585558 | 72585680 | 72585558 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72585757 | 72585843 | 72585757 | ID=MS.gene77531.t1.exon2;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72585757 | 72585843 | 72585757 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72585943 | 72586110 | 72585943 | ID=MS.gene77531.t1.exon3;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72585943 | 72586110 | 72585943 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72586536 | 72586711 | 72586536 | ID=MS.gene77531.t1.exon4;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72586536 | 72586711 | 72586536 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72586928 | 72587042 | 72586928 | ID=MS.gene77531.t1.exon5;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72586928 | 72587042 | 72586928 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72588793 | 72589021 | 72588793 | ID=MS.gene77531.t1.exon6;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72588793 | 72589021 | 72588793 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72589187 | 72589365 | 72589187 | ID=MS.gene77531.t1.exon7;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72589187 | 72589365 | 72589187 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72589447 | 72589617 | 72589447 | ID=MS.gene77531.t1.exon8;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72589447 | 72589617 | 72589447 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72592989 | 72593093 | 72592989 | ID=MS.gene77531.t1.exon9;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72592989 | 72593093 | 72592989 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72593173 | 72593280 | 72593173 | ID=MS.gene77531.t1.exon10;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72593173 | 72593280 | 72593173 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72593379 | 72593590 | 72593379 | ID=MS.gene77531.t1.exon11;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72593379 | 72593590 | 72593379 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72593663 | 72593755 | 72593663 | ID=MS.gene77531.t1.exon12;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72593663 | 72593755 | 72593663 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72594703 | 72594830 | 72594703 | ID=MS.gene77531.t1.exon13;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72594703 | 72594830 | 72594703 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72597866 | 72597980 | 72597866 | ID=MS.gene77531.t1.exon14;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72597866 | 72597980 | 72597866 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72598097 | 72598226 | 72598097 | ID=MS.gene77531.t1.exon15;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72598097 | 72598226 | 72598097 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72598309 | 72598518 | 72598309 | ID=MS.gene77531.t1.exon16;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72598309 | 72598518 | 72598309 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72598700 | 72598908 | 72598700 | ID=MS.gene77531.t1.exon17;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72598700 | 72598908 | 72598700 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72599024 | 72599225 | 72599024 | ID=MS.gene77531.t1.exon18;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72599024 | 72599225 | 72599024 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72599589 | 72599758 | 72599589 | ID=MS.gene77531.t1.exon19;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72599589 | 72599758 | 72599589 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72599832 | 72600156 | 72599832 | ID=MS.gene77531.t1.exon20;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72599832 | 72600156 | 72599832 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72600700 | 72600825 | 72600700 | ID=MS.gene77531.t1.exon21;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72600700 | 72600825 | 72600700 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72600925 | 72600977 | 72600925 | ID=MS.gene77531.t1.exon22;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72600925 | 72600977 | 72600925 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72601604 | 72601754 | 72601604 | ID=MS.gene77531.t1.exon23;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72601604 | 72601754 | 72601604 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72601849 | 72601911 | 72601849 | ID=MS.gene77531.t1.exon24;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72601849 | 72601911 | 72601849 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72602047 | 72602180 | 72602047 | ID=MS.gene77531.t1.exon25;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72602047 | 72602180 | 72602047 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72602267 | 72602395 | 72602267 | ID=MS.gene77531.t1.exon26;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72602267 | 72602395 | 72602267 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| chr3.2 | exon | 72602505 | 72602544 | 72602505 | ID=MS.gene77531.t1.exon27;Parent=MS.gene77531.t1 |
| chr3.2 | CDS | 72602505 | 72602544 | 72602505 | ID=cds.MS.gene77531.t1;Parent=MS.gene77531.t1 |
| Gene Sequence |
| Protein sequence |
