Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81051.t1 | KEH18521.1 | 98.8 | 1116 | 13 | 0 | 1 | 1116 | 872 | 1987 | 0.00E+00 | 2240.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81051.t1 | F4KD38 | 72.4 | 1134 | 291 | 7 | 1 | 1116 | 17 | 1146 | 0.0e+00 | 1666.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81051.t1 | A0A072TMT8 | 98.8 | 1116 | 13 | 0 | 1 | 1116 | 872 | 1987 | 0.0e+00 | 2240.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049463 | MS.gene81051 | 0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene81051 | 0.854219 | 1.42E-61 | -1.69E-46 |
| MS.gene051008 | MS.gene81051 | 0.96112 | 2.46E-119 | -1.69E-46 |
| MS.gene055778 | MS.gene81051 | 0.818755 | 1.66E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81051.t1 | MTR_8g023445 | 98.835 | 1116 | 13 | 0 | 1 | 1116 | 872 | 1987 | 0.0 | 2304 |
| MS.gene81051.t1 | MTR_1g023500 | 37.113 | 1164 | 644 | 20 | 17 | 1116 | 30 | 1169 | 0.0 | 739 |
| MS.gene81051.t1 | MTR_3g105990 | 29.592 | 1176 | 691 | 32 | 23 | 1116 | 53 | 1173 | 5.80e-141 | 456 |
| MS.gene81051.t1 | MTR_4g124030 | 27.341 | 1196 | 709 | 40 | 23 | 1113 | 25 | 1165 | 1.09e-106 | 362 |
| MS.gene81051.t1 | MTR_1g022135 | 60.741 | 270 | 72 | 4 | 79 | 347 | 2 | 238 | 4.29e-95 | 305 |
| MS.gene81051.t1 | MTR_1g022135 | 47.009 | 117 | 50 | 4 | 1010 | 1116 | 168 | 282 | 4.03e-19 | 89.7 |
| MS.gene81051.t1 | MTR_0002s0510 | 22.865 | 1124 | 696 | 39 | 17 | 1067 | 44 | 1069 | 1.48e-42 | 171 |
| MS.gene81051.t1 | MTR_4g051130 | 26.535 | 505 | 282 | 12 | 648 | 1067 | 498 | 998 | 2.07e-34 | 144 |
| MS.gene81051.t1 | MTR_1g022125 | 76.471 | 68 | 16 | 0 | 1 | 68 | 1 | 68 | 1.87e-29 | 112 |
| MS.gene81051.t1 | MTR_0189s0050 | 23.711 | 485 | 307 | 15 | 23 | 464 | 51 | 515 | 4.10e-26 | 114 |
| MS.gene81051.t1 | MTR_8g023440 | 70.588 | 51 | 15 | 0 | 473 | 523 | 102 | 152 | 5.91e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81051.t1 | AT5G45140 | 72.399 | 1134 | 291 | 7 | 1 | 1116 | 17 | 1146 | 0.0 | 1710 |
| MS.gene81051.t1 | AT5G45140 | 72.399 | 1134 | 291 | 7 | 1 | 1116 | 17 | 1146 | 0.0 | 1710 |
| MS.gene81051.t1 | AT5G45140 | 70.932 | 805 | 217 | 4 | 1 | 791 | 17 | 818 | 0.0 | 1183 |
| MS.gene81051.t1 | AT4G21710 | 36.512 | 1164 | 655 | 18 | 15 | 1116 | 25 | 1166 | 0.0 | 723 |
| MS.gene81051.t1 | AT3G23780 | 29.145 | 1170 | 699 | 30 | 23 | 1116 | 42 | 1157 | 3.79e-131 | 429 |
| MS.gene81051.t1 | AT3G23780 | 29.145 | 1170 | 699 | 30 | 23 | 1116 | 42 | 1157 | 3.79e-131 | 429 |
| MS.gene81051.t1 | AT3G18090 | 30.175 | 1087 | 651 | 28 | 90 | 1116 | 2 | 1040 | 2.80e-128 | 418 |
| MS.gene81051.t1 | AT1G29940 | 27.575 | 1204 | 697 | 42 | 22 | 1113 | 15 | 1155 | 7.19e-106 | 360 |
| MS.gene81051.t1 | AT3G18090 | 28.953 | 898 | 549 | 24 | 90 | 944 | 2 | 853 | 9.51e-89 | 306 |
| MS.gene81051.t1 | AT3G18090 | 28.953 | 898 | 549 | 24 | 90 | 944 | 2 | 853 | 1.19e-88 | 306 |
| MS.gene81051.t1 | ATCG00190 | 26.857 | 525 | 290 | 14 | 632 | 1067 | 494 | 1013 | 9.27e-35 | 144 |
Find 226 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGGCTGTCTAGTTATC+AGG | 0.188762 | 8.4:+71440654 | None:intergenic |
| ATTATTACAGTGCTATCTTT+TGG | 0.195144 | 8.4:-71448168 | MS.gene81051:intron |
| TGTCTAGTTATCAGGGCTTT+AGG | 0.202220 | 8.4:+71440662 | None:intergenic |
| CTTCACCTGGCGAAATTATT+AGG | 0.208940 | 8.4:-71442686 | MS.gene81051:CDS |
| TTTCATTATGGCAGTGCTTT+TGG | 0.218514 | 8.4:-71441550 | MS.gene81051:CDS |
| GGGAAAGATTTCATTTATTC+AGG | 0.231341 | 8.4:-71441379 | MS.gene81051:intron |
| GACAACCTGATATGTGTTTC+TGG | 0.232372 | 8.4:+71446838 | None:intergenic |
| AAACACCAGCTTTCAACTTA+TGG | 0.248385 | 8.4:+71438009 | None:intergenic |
| TCATCATATGAAAGAGTTAA+AGG | 0.266666 | 8.4:-71447213 | MS.gene81051:intron |
| TATCCAATAGGTTCCTCTTA+TGG | 0.273577 | 8.4:-71455271 | MS.gene81051:intron |
| TTGCGGAGAGCTTGTCTAAT+TGG | 0.276536 | 8.4:-71447933 | MS.gene81051:CDS |
| GTCTAGTTATCAGGGCTTTA+GGG | 0.276835 | 8.4:+71440663 | None:intergenic |
| TTTAATTACCTTGAGGAATT+CGG | 0.277234 | 8.4:+71459336 | None:intergenic |
| AATGGATGCAATTCTAAATA+AGG | 0.278220 | 8.4:-71451343 | MS.gene81051:CDS |
| TTGCAAGAAATGTTTCTCTT+AGG | 0.278221 | 8.4:+71451590 | None:intergenic |
| CAACAACTCCGTAACATAAT+AGG | 0.290400 | 8.4:+71457987 | None:intergenic |
| GGACACCTTACTTTATCTAT+TGG | 0.327063 | 8.4:-71444258 | MS.gene81051:CDS |
| GTTATCCTTTATAAGTGCTT+TGG | 0.335287 | 8.4:-71449266 | MS.gene81051:CDS |
| TCGTGTGGTAAATTTCATTA+TGG | 0.343585 | 8.4:-71441562 | MS.gene81051:CDS |
| TTTAATTTCTGGTAGTATAT+TGG | 0.344466 | 8.4:+71440996 | None:intergenic |
| ATCTCAATATGAGTAGTTTC+TGG | 0.347354 | 8.4:+71446926 | None:intergenic |
| TCATCTCTTGATCGAGGCTT+TGG | 0.351780 | 8.4:-71444027 | MS.gene81051:CDS |
| TTGTCGACAGAGGACTTTAC+AGG | 0.352837 | 8.4:+71459373 | None:intergenic |
| CGTCAACTAACTTGCCTGAT+AGG | 0.353833 | 8.4:-71442608 | MS.gene81051:intron |
| TTGGCCCAAAGCACTTATAA+AGG | 0.353979 | 8.4:+71449261 | None:intergenic |
| TGCATGCAAACTCTTGATTC+AGG | 0.362458 | 8.4:-71437937 | MS.gene81051:intron |
| TTATCCTTTATAAGTGCTTT+GGG | 0.368604 | 8.4:-71449265 | MS.gene81051:CDS |
| CTCTAGATACTTGATGATGA+TGG | 0.372046 | 8.4:-71442714 | MS.gene81051:intron |
| TTAATTACCTTGAGGAATTC+GGG | 0.372835 | 8.4:+71459337 | None:intergenic |
| AGTTATCTCTCTTCTATTTG+AGG | 0.372975 | 8.4:-71450369 | MS.gene81051:intron |
| GATTGATTATGATGAGGATA+TGG | 0.374305 | 8.4:+71446863 | None:intergenic |
| GTGGCTGGACTCTTGTCATT+TGG | 0.377320 | 8.4:+71449242 | None:intergenic |
| CAAGAAGTTGTACAGTTGAT+TGG | 0.377344 | 8.4:-71455216 | MS.gene81051:CDS |
| GTTAATGAAACAAACCTATC+AGG | 0.384993 | 8.4:+71442594 | None:intergenic |
| TTTCTAGCTCTCCCTTCTGT+TGG | 0.394531 | 8.4:+71440638 | None:intergenic |
| AACAAACGATTGGAGTTATC+TGG | 0.398077 | 8.4:-71450395 | MS.gene81051:CDS |
| TAGTGATCCGTATGAAGTTC+AGG | 0.398200 | 8.4:-71439235 | MS.gene81051:intron |
| GGAAAGATGATAGAACTTCT+TGG | 0.401457 | 8.4:-71441601 | MS.gene81051:CDS |
| CTGCAGAGCTTGTGGATTGT+TGG | 0.403260 | 8.4:-71438042 | MS.gene81051:CDS |
| GCTTTCATTATAACCATAAG+AGG | 0.405487 | 8.4:+71455258 | None:intergenic |
| TGCAGAGCTTGTGGATTGTT+GGG | 0.411675 | 8.4:-71438041 | MS.gene81051:CDS |
| TGTTATGATAAGACGCATAA+TGG | 0.413829 | 8.4:-71451361 | MS.gene81051:CDS |
| AGTCCACAAGATTCACCTTC+AGG | 0.415566 | 8.4:+71448921 | None:intergenic |
| CAGATAGTCGGCATGTCTGT+GGG | 0.422718 | 8.4:+71458433 | None:intergenic |
| GTTTGCGGTGGACAAATTGT+TGG | 0.422755 | 8.4:-71450226 | MS.gene81051:CDS |
| AGATTGTATCACTCCCGGTT+TGG | 0.423740 | 8.4:-71449442 | MS.gene81051:CDS |
| CAAAATATCCTCCAGGATCA+AGG | 0.424882 | 8.4:+71457821 | None:intergenic |
| TCAAACTTCCTAGCTTTGTC+TGG | 0.424902 | 8.4:+71450198 | None:intergenic |
| TAATGAGGAAAACAATGCTT+TGG | 0.431535 | 8.4:-71447055 | MS.gene81051:intron |
| GTTTGTTCATCTTGTAAGAA+TGG | 0.432905 | 8.4:-71437990 | MS.gene81051:CDS |
| GTGTTGTGTTTACTTAGCTT+CGG | 0.438709 | 8.4:-71447297 | MS.gene81051:CDS |
| CAAATAGAAGAGAGATAACT+TGG | 0.440237 | 8.4:+71450372 | None:intergenic |
| GAAGATTGCCTATTATGTTA+CGG | 0.440706 | 8.4:-71457995 | MS.gene81051:CDS |
| CGTGATTGCTTAATTGCATA+TGG | 0.441077 | 8.4:-71439294 | MS.gene81051:CDS |
| TAGAGCTTTGCAGCCTAGCC+AGG | 0.441570 | 8.4:-71449188 | MS.gene81051:intron |
| CATATTGCCTAAAGCTCTAT+CGG | 0.441934 | 8.4:+71443826 | None:intergenic |
| ATACATTTCAATTACCTCAA+TGG | 0.442941 | 8.4:+71455158 | None:intergenic |
| GTCGTTGTATAGTTATGAAA+AGG | 0.445169 | 8.4:-71444005 | MS.gene81051:intron |
| GCATGCATATGGTAGCTTCA+TGG | 0.445247 | 8.4:+71437953 | None:intergenic |
| AGTATCTCTTTGCAATGATA+AGG | 0.445610 | 8.4:-71442435 | MS.gene81051:CDS |
| ACAGCGACATATATACATTT+CGG | 0.446174 | 8.4:+71451381 | None:intergenic |
| CGAGAGAGTCCTTTCCAAAC+CGG | 0.446245 | 8.4:+71449428 | None:intergenic |
| TAAAACGTACCAGAGAAATC+AGG | 0.447508 | 8.4:+71448844 | None:intergenic |
| GGCGAGTGTCCCCTTGATCC+TGG | 0.448789 | 8.4:-71457832 | MS.gene81051:CDS |
| ATCTCCCAGAAACACATATC+AGG | 0.450896 | 8.4:-71446843 | MS.gene81051:intron |
| TAGGTTGGATATGATAAGCT+TGG | 0.451032 | 8.4:-71444126 | MS.gene81051:CDS |
| TATTCAACATCGACATATAT+CGG | 0.451772 | 8.4:+71458157 | None:intergenic |
| GAAAGACCCGATAGAGCTTT+AGG | 0.451982 | 8.4:-71443833 | MS.gene81051:CDS |
| TGCAAACATGCAACCTCAAA+AGG | 0.453043 | 8.4:-71451776 | MS.gene81051:intron |
| TGCTTACTGTAGTGTGCAAT+GGG | 0.456352 | 8.4:-71446717 | MS.gene81051:intron |
| TTCTATTGTTGTTAGGTGCA+CGG | 0.461033 | 8.4:-71451417 | MS.gene81051:intron |
| AAGATGCATGCTCGTGGTAG+TGG | 0.462555 | 8.4:-71440686 | MS.gene81051:CDS |
| AGGTCTACGAGTTGGAGAAA+TGG | 0.466194 | 8.4:-71439319 | MS.gene81051:CDS |
| TGAGGATTCATAATCAGATC+TGG | 0.467678 | 8.4:+71442184 | None:intergenic |
| ATGGTTATAATGAAAGCTAT+GGG | 0.469205 | 8.4:-71455252 | MS.gene81051:CDS |
| GACAAATGAAATTAAGTTTG+CGG | 0.470432 | 8.4:-71450241 | MS.gene81051:CDS |
| GTTATATGCTATATTTCCCA+TGG | 0.474698 | 8.4:+71446686 | None:intergenic |
| GAAAACATGGAACATCTCTC+TGG | 0.475286 | 8.4:-71448140 | MS.gene81051:CDS |
| TGTTGGCTGTCTAGTTATCA+GGG | 0.475649 | 8.4:+71440655 | None:intergenic |
| ACTTTATTCTGTGTTTCAGT+TGG | 0.476453 | 8.4:+71442633 | None:intergenic |
| AAAATGACAAGAAAGGAATT+GGG | 0.479700 | 8.4:+71448101 | None:intergenic |
| CTGACAAGGTTGAAACCATA+AGG | 0.481373 | 8.4:-71441510 | MS.gene81051:intron |
| TGGCTAGGCTGCAAAGCTCT+AGG | 0.483789 | 8.4:+71449190 | None:intergenic |
| GTCCGACAAAAGTATTCAAA+TGG | 0.485488 | 8.4:-71443872 | MS.gene81051:CDS |
| TTCCTAGACTTCTCAAACTG+TGG | 0.488374 | 8.4:+71449223 | None:intergenic |
| CTCAGGCCTCCGAGTGTGAC+GGG | 0.489255 | 8.4:+71442385 | None:intergenic |
| TATGGTTATAATGAAAGCTA+TGG | 0.491539 | 8.4:-71455253 | MS.gene81051:CDS |
| GAAGCCGAGCTTGCAAAACT+TGG | 0.492933 | 8.4:-71457942 | MS.gene81051:intron |
| ATACCATCCCTTGTTATTGA+CGG | 0.493036 | 8.4:+71458471 | None:intergenic |
| ATCAAGAGTTTGCATGCATA+TGG | 0.495063 | 8.4:+71437942 | None:intergenic |
| TAGACTTCTCAAACTGTGGC+TGG | 0.495619 | 8.4:+71449227 | None:intergenic |
| TATTTATATACAGTGCATAT+CGG | 0.496342 | 8.4:-71442508 | MS.gene81051:intron |
| TCAACATTCAATAAATGTCA+TGG | 0.499190 | 8.4:-71442476 | MS.gene81051:CDS |
| TTCACCTTCAGGAGTATCGC+AGG | 0.499192 | 8.4:+71448932 | None:intergenic |
| AATCAACGTAGTCCAATGCT+TGG | 0.499502 | 8.4:+71454578 | None:intergenic |
| ATAAACCAATAGATAAAGTA+AGG | 0.500133 | 8.4:+71444253 | None:intergenic |
| ACAACCTGATATGTGTTTCT+GGG | 0.500309 | 8.4:+71446839 | None:intergenic |
| AACTACCATTGTGATGGAAA+AGG | 0.502065 | 8.4:-71455461 | MS.gene81051:CDS |
| AACATTTCTTGCAAATGTGC+CGG | 0.505273 | 8.4:-71451581 | MS.gene81051:intron |
| GGATTTCAGCTTACCTGGCT+AGG | 0.507068 | 8.4:+71449175 | None:intergenic |
| AATCGAGATTGTATCACTCC+CGG | 0.507114 | 8.4:-71449447 | MS.gene81051:CDS |
| GAACTTCTTGGAGGGAAAGC+AGG | 0.507171 | 8.4:-71441589 | MS.gene81051:CDS |
| TCAGATAGTCGGCATGTCTG+TGG | 0.510182 | 8.4:+71458432 | None:intergenic |
| ATCAACGTAGTCCAATGCTT+GGG | 0.510954 | 8.4:+71454579 | None:intergenic |
| TCTACTTATGCCATCCATTG+AGG | 0.512226 | 8.4:-71455172 | MS.gene81051:intron |
| TCTAGATACTTGATGATGAT+GGG | 0.512306 | 8.4:-71442713 | MS.gene81051:intron |
| GACAACAAAATCAATTGAGC+TGG | 0.514877 | 8.4:-71444213 | MS.gene81051:intron |
| GATAAATTCAGTAGCAGACA+TGG | 0.518411 | 8.4:-71442274 | MS.gene81051:CDS |
| CCTCAGGCCTCCGAGTGTGA+CGG | 0.519046 | 8.4:+71442384 | None:intergenic |
| ACAGAAGGGAGAGCTAGAAA+TGG | 0.522613 | 8.4:-71440635 | MS.gene81051:CDS |
| TTGCGGAACAATTGTCCAGC+AGG | 0.523050 | 8.4:-71442239 | MS.gene81051:CDS |
| TCCTCTCGTCATTGCTGACA+AGG | 0.523919 | 8.4:-71447255 | MS.gene81051:CDS |
| GGCTAGGCTGCAAAGCTCTA+GGG | 0.524481 | 8.4:+71449191 | None:intergenic |
| TGGATAAGCCAGACAAAGCT+AGG | 0.525629 | 8.4:-71450206 | MS.gene81051:CDS |
| TTGCTTACTGTAGTGTGCAA+TGG | 0.530789 | 8.4:-71446718 | MS.gene81051:intron |
| AAAATATCCTCCAGGATCAA+GGG | 0.532149 | 8.4:+71457822 | None:intergenic |
| ATACAGGTCTGCAGAGCTTG+TGG | 0.534933 | 8.4:-71438050 | MS.gene81051:intron |
| TACAACCATAAGTTGAAAGC+TGG | 0.535797 | 8.4:-71438014 | MS.gene81051:CDS |
| ATTTACACAAGCCCAAGCAT+TGG | 0.539082 | 8.4:-71454590 | MS.gene81051:CDS |
| GTGGTCTCCTGTGCTTGCCA+AGG | 0.539894 | 8.4:+71448066 | None:intergenic |
| GGATATGATAAGCTTGGAGC+AGG | 0.540715 | 8.4:-71444120 | MS.gene81051:CDS |
| GTATGATCCTTGGCAAGCAC+AGG | 0.541204 | 8.4:-71448073 | MS.gene81051:CDS |
| ATTGGACTACGTTGATTCAA+AGG | 0.541914 | 8.4:-71454572 | MS.gene81051:CDS |
| TGAATCCTCATGGGTTTCCA+AGG | 0.543421 | 8.4:-71442171 | MS.gene81051:intron |
| TGTGTTTACTTAGCTTCGGA+TGG | 0.543915 | 8.4:-71447293 | MS.gene81051:CDS |
| GATCTGATTATGAATCCTCA+TGG | 0.543986 | 8.4:-71442181 | MS.gene81051:CDS |
| ATTTCAATTACCTCAATGGA+TGG | 0.544891 | 8.4:+71455162 | None:intergenic |
| CATGGGCAGAAAGGTGTTTG+CGG | 0.545348 | 8.4:-71442256 | MS.gene81051:CDS |
| AGTAGCAGACATGGGCAGAA+AGG | 0.545438 | 8.4:-71442265 | MS.gene81051:CDS |
| GGCATCAGTCGAATGACAGT+TGG | 0.546259 | 8.4:-71441622 | MS.gene81051:intron |
| AAAACGTACCAGAGAAATCA+GGG | 0.549229 | 8.4:+71448845 | None:intergenic |
| AGCCACAGTTTGAGAAGTCT+AGG | 0.550170 | 8.4:-71449225 | MS.gene81051:CDS |
| CTGGGAGATTGATTATGATG+AGG | 0.554139 | 8.4:+71446857 | None:intergenic |
| TGAGTATCTTGATGTTAATG+AGG | 0.556929 | 8.4:-71447070 | MS.gene81051:CDS |
| GTATCACTCCCGGTTTGGAA+AGG | 0.560574 | 8.4:-71449437 | MS.gene81051:CDS |
| TTGACTACAAAATATCCTCC+AGG | 0.564734 | 8.4:+71457814 | None:intergenic |
| GTTGGCCTAATAATTTCGCC+AGG | 0.566945 | 8.4:+71442681 | None:intergenic |
| AAAATGGGAAGTCTTCCTGC+TGG | 0.570263 | 8.4:+71442224 | None:intergenic |
| TGCAATGGGAAAGCAAGCCA+TGG | 0.571900 | 8.4:-71446703 | MS.gene81051:CDS |
| ATTGTCTTATTAAAGCCTCT+CGG | 0.573192 | 8.4:-71459148 | MS.gene81051:CDS |
| AAGATGATAGAACTTCTTGG+AGG | 0.573254 | 8.4:-71441598 | MS.gene81051:CDS |
| AAATGAAATTAAGTTTGCGG+TGG | 0.573964 | 8.4:-71450238 | MS.gene81051:CDS |
| AATTTCTAACCCGTCACACT+CGG | 0.574678 | 8.4:-71442394 | MS.gene81051:CDS |
| AGAAAGTGGTCATGCTGACA+AGG | 0.575298 | 8.4:-71441524 | MS.gene81051:CDS |
| GAAGGGAGAGCTAGAAATGG+AGG | 0.575836 | 8.4:-71440632 | MS.gene81051:intron |
| TCATGTCACTACTGATGAAG+AGG | 0.576837 | 8.4:-71448874 | MS.gene81051:CDS |
| TTGGTCAACCGTCAATAACA+AGG | 0.577459 | 8.4:-71458479 | MS.gene81051:CDS |
| TGTCTATGTCAATGAAAAGC+AGG | 0.577589 | 8.4:-71447898 | MS.gene81051:intron |
| ATCTGATTATGAATCCTCAT+GGG | 0.577851 | 8.4:-71442180 | MS.gene81051:CDS |
| TTGTTGATATAAATGTCAGT+TGG | 0.578913 | 8.4:+71442663 | None:intergenic |
| TGACATGAGTCATCAAAGCC+AGG | 0.579560 | 8.4:+71448889 | None:intergenic |
| TAGAGCTTTAGGCAATATGC+AGG | 0.579745 | 8.4:-71443822 | MS.gene81051:intron |
| CCTACGTTCGGTCAGATAGT+CGG | 0.580628 | 8.4:+71458421 | None:intergenic |
| ATAACTAGACAGCCAACAGA+AGG | 0.581097 | 8.4:-71440650 | MS.gene81051:CDS |
| TTATGTTTAGGTCTACGAGT+TGG | 0.581703 | 8.4:-71439327 | MS.gene81051:intron |
| GGTACCCGCATATTGAACTA+AGG | 0.582627 | 8.4:-71459127 | MS.gene81051:intron |
| ATATTGCCTAAAGCTCTATC+GGG | 0.585140 | 8.4:+71443827 | None:intergenic |
| CAATCTTCCAATTAAAACAT+CGG | 0.585404 | 8.4:+71458010 | None:intergenic |
| TAATAAAATTAGAGTGCCAA+AGG | 0.589749 | 8.4:-71458116 | MS.gene81051:intron |
| TTATGTCGGAAACAAACGAT+TGG | 0.590203 | 8.4:-71450405 | MS.gene81051:CDS |
| TATAATGAAAGCTATGGGGA+TGG | 0.590654 | 8.4:-71455247 | MS.gene81051:CDS |
| GTTTACTTAGCTTCGGATGG+TGG | 0.590765 | 8.4:-71447290 | MS.gene81051:CDS |
| ACTTGTTCCCGAATTCCTCA+AGG | 0.591959 | 8.4:-71459344 | MS.gene81051:intron |
| GAGAGAGTCCTTTCCAAACC+GGG | 0.593600 | 8.4:+71449429 | None:intergenic |
| TGTCGATGTTGAATACACTC+AGG | 0.599132 | 8.4:-71458149 | MS.gene81051:CDS |
| CTACAGTGGATATGATATTG+AGG | 0.599159 | 8.4:-71444070 | MS.gene81051:CDS |
| ACTCCTGAAGGTGAATCTTG+TGG | 0.600197 | 8.4:-71448924 | MS.gene81051:CDS |
| TTGGAAAGGACTCTCTCGAC+TGG | 0.600306 | 8.4:-71449423 | MS.gene81051:CDS |
| GAGAAGTCTAGGAAAGTAAG+TGG | 0.600420 | 8.4:-71449214 | MS.gene81051:CDS |
| AACATGGCTTCAACTACAGT+GGG | 0.602943 | 8.4:-71441399 | MS.gene81051:CDS |
| TGTCACTACTGATGAAGAGG+AGG | 0.604246 | 8.4:-71448871 | MS.gene81051:CDS |
| CAAACTCCTAAAATAGTGAA+AGG | 0.605441 | 8.4:+71446899 | None:intergenic |
| AGATGATAGAACTTCTTGGA+GGG | 0.607982 | 8.4:-71441597 | MS.gene81051:CDS |
| CAACCGTCAATAACAAGGGA+TGG | 0.609429 | 8.4:-71458474 | MS.gene81051:CDS |
| AATTCTAAATAAGGATGCGA+TGG | 0.610719 | 8.4:-71451334 | MS.gene81051:CDS |
| AAAGTAAGGTGTCCATCCGT+CGG | 0.610969 | 8.4:+71444267 | None:intergenic |
| TTGTGGACTAGTAAAGAACC+TGG | 0.611178 | 8.4:-71448907 | MS.gene81051:CDS |
| CCCTTGTCAGCAATGACGAG+AGG | 0.614173 | 8.4:+71447254 | None:intergenic |
| TGTCAGCAATGACGAGAGGA+CGG | 0.614740 | 8.4:+71447258 | None:intergenic |
| TGTAGTCAAAGGGAATGAGA+AGG | 0.615022 | 8.4:-71457800 | MS.gene81051:intron |
| AACAAATCATCTCTTGATCG+AGG | 0.615110 | 8.4:-71444033 | MS.gene81051:CDS |
| AGGTTTAAGATGCACAAGAG+TGG | 0.616496 | 8.4:-71449384 | MS.gene81051:CDS |
| GTCGATGTTGAATACACTCA+GGG | 0.616902 | 8.4:-71458148 | MS.gene81051:CDS |
| TTCAATATGCGGGTACCGAG+AGG | 0.617025 | 8.4:+71459133 | None:intergenic |
| CTACCAGAAATTAAAACACA+TGG | 0.617916 | 8.4:-71440988 | MS.gene81051:intron |
| TGTCCCTGCGATACTCCTGA+AGG | 0.617926 | 8.4:-71448936 | MS.gene81051:CDS |
| TCTGTGGGGTAACTAACTCA+AGG | 0.620514 | 8.4:+71458448 | None:intergenic |
| TAAGGATGCGATGGATGACA+AGG | 0.628251 | 8.4:-71451325 | MS.gene81051:intron |
| GGGAAATATAGCATATAACC+AGG | 0.628544 | 8.4:-71446682 | MS.gene81051:intron |
| GTAGCTGTCATGAGCTACAG+TGG | 0.628748 | 8.4:-71444084 | MS.gene81051:CDS |
| CCTCTCGTCATTGCTGACAA+GGG | 0.631421 | 8.4:-71447254 | MS.gene81051:CDS |
| CCGTCACACTCGGAGGCCTG+AGG | 0.634563 | 8.4:-71442384 | MS.gene81051:intron |
| CGTACCTTAGTTCAATATGC+GGG | 0.636906 | 8.4:+71459123 | None:intergenic |
| TGGCAAGCACAGGAGACCAC+AGG | 0.640501 | 8.4:-71448063 | MS.gene81051:intron |
| AAACATGGCTTCAACTACAG+TGG | 0.642929 | 8.4:-71441400 | MS.gene81051:CDS |
| TGATGGAAAAGGAGAAGTTG+TGG | 0.644702 | 8.4:-71455450 | MS.gene81051:CDS |
| GATGATGGGATTGCTTCACC+TGG | 0.645108 | 8.4:-71442699 | MS.gene81051:CDS |
| AAATATCCTCCAGGATCAAG+GGG | 0.645726 | 8.4:+71457823 | None:intergenic |
| TAAATGTCATGGAGGTGAAG+TGG | 0.648127 | 8.4:-71442465 | MS.gene81051:CDS |
| AGTAAAACTCTTGTGAAACA+TGG | 0.648821 | 8.4:-71441415 | MS.gene81051:CDS |
| CCGTACCTTAGTTCAATATG+CGG | 0.649485 | 8.4:+71459122 | None:intergenic |
| GACAGAGGACTTTACAGGTG+CGG | 0.650619 | 8.4:+71459378 | None:intergenic |
| GCACAAGAGTGGAGTAACAC+AGG | 0.657325 | 8.4:-71449373 | MS.gene81051:intron |
| GCAATGGGAAAGCAAGCCAT+GGG | 0.660049 | 8.4:-71446702 | MS.gene81051:CDS |
| TCACCTTCAGGAGTATCGCA+GGG | 0.660133 | 8.4:+71448933 | None:intergenic |
| AAGTTGAAATTTGTCGACAG+AGG | 0.663947 | 8.4:+71459363 | None:intergenic |
| CTACTGCAATGAGAAAGTTG+CGG | 0.666685 | 8.4:-71447950 | MS.gene81051:CDS |
| GTCACTACTGATGAAGAGGA+GGG | 0.671838 | 8.4:-71448870 | MS.gene81051:CDS |
| AATTACCTTGGAAACCCATG+AGG | 0.672959 | 8.4:+71442166 | None:intergenic |
| TTCTAACCCGTCACACTCGG+AGG | 0.674877 | 8.4:-71442391 | MS.gene81051:CDS |
| TAACTAGACAGCCAACAGAA+GGG | 0.678654 | 8.4:-71440649 | MS.gene81051:CDS |
| GTTGTCAGCAAAGGTCGTTG+AGG | 0.680537 | 8.4:+71444230 | None:intergenic |
| TGGTCAACCGTCAATAACAA+GGG | 0.682009 | 8.4:-71458478 | MS.gene81051:CDS |
| ATAAATTCAGTAGCAGACAT+GGG | 0.686101 | 8.4:-71442273 | MS.gene81051:CDS |
| GAATAGAATAATTATAGACA+CGG | 0.686278 | 8.4:-71457410 | MS.gene81051:CDS |
| CTGGATAAGATGCATGCTCG+TGG | 0.686692 | 8.4:-71440692 | MS.gene81051:CDS |
| AACGTACCAGAGAAATCAGG+GGG | 0.687293 | 8.4:+71448847 | None:intergenic |
| GGGAAAGCAGGAGTTTCGTG+TGG | 0.689358 | 8.4:-71441577 | MS.gene81051:CDS |
| AGATAGTCGGCATGTCTGTG+GGG | 0.692448 | 8.4:+71458434 | None:intergenic |
| GGACTACGTTGATTCAAAGG+CGG | 0.694056 | 8.4:-71454569 | MS.gene81051:intron |
| ACATTCAATAAATGTCATGG+AGG | 0.706220 | 8.4:-71442473 | MS.gene81051:CDS |
| TGGTTATAATGAAAGCTATG+GGG | 0.713501 | 8.4:-71455251 | MS.gene81051:CDS |
| TGCATATGGTAGCTTCATGG+TGG | 0.731017 | 8.4:+71437956 | None:intergenic |
| AAACGTACCAGAGAAATCAG+GGG | 0.735423 | 8.4:+71448846 | None:intergenic |
| GAGTGTCCCCTTGATCCTGG+AGG | 0.755495 | 8.4:-71457829 | MS.gene81051:CDS |
| ATAAGTAGAAAACTATAACG+AGG | 0.757109 | 8.4:+71455186 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71437375 | 71459419 | 71437375 | ID=MS.gene81051 |
| chr8.4 | mRNA | 71437375 | 71459419 | 71437375 | ID=MS.gene81051.t1;Parent=MS.gene81051 |
| chr8.4 | exon | 71459345 | 71459419 | 71459345 | ID=MS.gene81051.t1.exon1;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71459345 | 71459419 | 71459345 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71459128 | 71459249 | 71459128 | ID=MS.gene81051.t1.exon2;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71459128 | 71459249 | 71459128 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71458426 | 71458518 | 71458426 | ID=MS.gene81051.t1.exon3;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71458426 | 71458518 | 71458426 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71458117 | 71458189 | 71458117 | ID=MS.gene81051.t1.exon4;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71458117 | 71458189 | 71458117 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71457943 | 71458033 | 71457943 | ID=MS.gene81051.t1.exon5;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71457943 | 71458033 | 71457943 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71457801 | 71457853 | 71457801 | ID=MS.gene81051.t1.exon6;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71457801 | 71457853 | 71457801 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71457397 | 71457461 | 71457397 | ID=MS.gene81051.t1.exon7;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71457397 | 71457461 | 71457397 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71455423 | 71455528 | 71455423 | ID=MS.gene81051.t1.exon8;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71455423 | 71455528 | 71455423 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71455173 | 71455283 | 71455173 | ID=MS.gene81051.t1.exon9;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71455173 | 71455283 | 71455173 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71454570 | 71454632 | 71454570 | ID=MS.gene81051.t1.exon10;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71454570 | 71454632 | 71454570 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71451777 | 71451815 | 71451777 | ID=MS.gene81051.t1.exon11;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71451777 | 71451815 | 71451777 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71451582 | 71451632 | 71451582 | ID=MS.gene81051.t1.exon12;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71451582 | 71451632 | 71451582 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71451326 | 71451424 | 71451326 | ID=MS.gene81051.t1.exon13;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71451326 | 71451424 | 71451326 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71450370 | 71450429 | 71450370 | ID=MS.gene81051.t1.exon14;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71450370 | 71450429 | 71450370 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71450188 | 71450280 | 71450188 | ID=MS.gene81051.t1.exon15;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71450188 | 71450280 | 71450188 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71449374 | 71449478 | 71449374 | ID=MS.gene81051.t1.exon16;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71449374 | 71449478 | 71449374 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71449189 | 71449299 | 71449189 | ID=MS.gene81051.t1.exon17;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71449189 | 71449299 | 71449189 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71448854 | 71448970 | 71448854 | ID=MS.gene81051.t1.exon18;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71448854 | 71448970 | 71448854 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71448064 | 71448180 | 71448064 | ID=MS.gene81051.t1.exon19;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71448064 | 71448180 | 71448064 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71447899 | 71447979 | 71447899 | ID=MS.gene81051.t1.exon20;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71447899 | 71447979 | 71447899 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71447214 | 71447318 | 71447214 | ID=MS.gene81051.t1.exon21;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71447214 | 71447318 | 71447214 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71447056 | 71447136 | 71447056 | ID=MS.gene81051.t1.exon22;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71447056 | 71447136 | 71447056 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71446844 | 71446975 | 71446844 | ID=MS.gene81051.t1.exon23;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71446844 | 71446975 | 71446844 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71446683 | 71446727 | 71446683 | ID=MS.gene81051.t1.exon24;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71446683 | 71446727 | 71446683 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71444214 | 71444291 | 71444214 | ID=MS.gene81051.t1.exon25;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71444214 | 71444291 | 71444214 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71444006 | 71444145 | 71444006 | ID=MS.gene81051.t1.exon26;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71444006 | 71444145 | 71444006 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71443823 | 71443904 | 71443823 | ID=MS.gene81051.t1.exon27;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71443823 | 71443904 | 71443823 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71442609 | 71442730 | 71442609 | ID=MS.gene81051.t1.exon28;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71442609 | 71442730 | 71442609 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71442385 | 71442517 | 71442385 | ID=MS.gene81051.t1.exon29;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71442385 | 71442517 | 71442385 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71442172 | 71442302 | 71442172 | ID=MS.gene81051.t1.exon30;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71442172 | 71442302 | 71442172 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71441511 | 71441636 | 71441511 | ID=MS.gene81051.t1.exon31;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71441511 | 71441636 | 71441511 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71441380 | 71441435 | 71441380 | ID=MS.gene81051.t1.exon32;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71441380 | 71441435 | 71441380 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71440989 | 71441059 | 71440989 | ID=MS.gene81051.t1.exon33;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71440989 | 71441059 | 71440989 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71440633 | 71440717 | 71440633 | ID=MS.gene81051.t1.exon34;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71440633 | 71440717 | 71440633 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71439236 | 71439339 | 71439236 | ID=MS.gene81051.t1.exon35;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71439236 | 71439339 | 71439236 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71437938 | 71438066 | 71437938 | ID=MS.gene81051.t1.exon36;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71437938 | 71438066 | 71437938 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| chr8.4 | exon | 71437375 | 71437389 | 71437375 | ID=MS.gene81051.t1.exon37;Parent=MS.gene81051.t1 |
| chr8.4 | CDS | 71437375 | 71437389 | 71437375 | ID=cds.MS.gene81051.t1;Parent=MS.gene81051.t1 |
| Gene Sequence |
| Protein sequence |
