Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04978.t1 | XP_003600716.2 | 96.3 | 492 | 17 | 1 | 1 | 492 | 1 | 491 | 4.10E-269 | 936.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04978.t1 | Q9C7U5 | 67.1 | 477 | 150 | 2 | 19 | 489 | 26 | 501 | 8.0e-189 | 661.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04978.t1 | G7J9D2 | 96.3 | 492 | 17 | 1 | 1 | 492 | 1 | 491 | 3.0e-269 | 936.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04978 | MS.gene049885 | PPI |
| MS.gene04978 | MS.gene045397 | PPI |
| MS.gene79856 | MS.gene04978 | PPI |
| MS.gene08772 | MS.gene04978 | PPI |
| MS.gene04978 | MS.gene08923 | PPI |
| MS.gene08924 | MS.gene04978 | PPI |
| MS.gene04978 | MS.gene77492 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04978.t1 | MTR_3g065460 | 96.341 | 492 | 17 | 1 | 1 | 492 | 1 | 491 | 0.0 | 972 |
| MS.gene04978.t1 | MTR_5g078200 | 76.782 | 491 | 105 | 4 | 1 | 484 | 1 | 489 | 0.0 | 788 |
| MS.gene04978.t1 | MTR_5g078200 | 77.193 | 456 | 97 | 2 | 36 | 484 | 1 | 456 | 0.0 | 746 |
| MS.gene04978.t1 | MTR_1g031900 | 68.386 | 446 | 141 | 0 | 6 | 451 | 5 | 450 | 0.0 | 659 |
| MS.gene04978.t1 | MTR_1g031900 | 68.397 | 443 | 140 | 0 | 6 | 448 | 5 | 447 | 0.0 | 655 |
| MS.gene04978.t1 | MTR_4g132280 | 54.219 | 474 | 212 | 2 | 20 | 491 | 40 | 510 | 0.0 | 527 |
| MS.gene04978.t1 | MTR_8g085720 | 50.203 | 492 | 232 | 4 | 6 | 487 | 10 | 498 | 1.68e-169 | 487 |
| MS.gene04978.t1 | MTR_3g083580 | 51.044 | 431 | 208 | 2 | 24 | 453 | 25 | 453 | 2.13e-166 | 479 |
| MS.gene04978.t1 | MTR_6g088885 | 41.898 | 432 | 239 | 4 | 24 | 446 | 26 | 454 | 9.71e-121 | 363 |
| MS.gene04978.t1 | MTR_5g085580 | 40.807 | 446 | 238 | 3 | 25 | 447 | 25 | 467 | 1.45e-115 | 348 |
| MS.gene04978.t1 | MTR_1g056640 | 39.696 | 461 | 241 | 3 | 21 | 447 | 34 | 491 | 1.08e-112 | 342 |
| MS.gene04978.t1 | MTR_8g102340 | 41.099 | 455 | 222 | 6 | 1 | 446 | 1 | 418 | 5.45e-111 | 337 |
| MS.gene04978.t1 | MTR_4g069940 | 36.923 | 455 | 272 | 3 | 5 | 447 | 9 | 460 | 7.35e-102 | 313 |
| MS.gene04978.t1 | MTR_8g012400 | 36.739 | 460 | 272 | 8 | 1 | 447 | 6 | 459 | 4.75e-99 | 306 |
| MS.gene04978.t1 | MTR_4g088155 | 35.714 | 462 | 276 | 7 | 3 | 447 | 1 | 458 | 2.73e-96 | 299 |
| MS.gene04978.t1 | MTR_3g116510 | 36.564 | 454 | 273 | 6 | 5 | 448 | 8 | 456 | 9.35e-95 | 295 |
| MS.gene04978.t1 | MTR_7g053500 | 36.009 | 436 | 262 | 6 | 26 | 447 | 27 | 459 | 1.30e-94 | 295 |
| MS.gene04978.t1 | MTR_1g022160 | 36.087 | 460 | 257 | 6 | 22 | 448 | 21 | 476 | 9.40e-93 | 290 |
| MS.gene04978.t1 | MTR_1g022160 | 36.026 | 458 | 256 | 6 | 22 | 446 | 21 | 474 | 6.10e-91 | 286 |
| MS.gene04978.t1 | MTR_1g022160 | 35.698 | 451 | 253 | 6 | 22 | 439 | 21 | 467 | 4.00e-88 | 278 |
| MS.gene04978.t1 | MTR_3g080410 | 43.119 | 327 | 182 | 2 | 25 | 350 | 26 | 349 | 3.80e-86 | 269 |
| MS.gene04978.t1 | MTR_7g026340 | 36.424 | 453 | 246 | 12 | 13 | 444 | 15 | 446 | 7.75e-86 | 271 |
| MS.gene04978.t1 | MTR_4g083500 | 35.893 | 521 | 295 | 14 | 1 | 491 | 20 | 531 | 3.69e-85 | 272 |
| MS.gene04978.t1 | MTR_7g053500 | 36.979 | 384 | 225 | 6 | 78 | 447 | 2 | 382 | 1.62e-83 | 263 |
| MS.gene04978.t1 | MTR_8g012400 | 37.008 | 381 | 226 | 6 | 78 | 447 | 2 | 379 | 3.29e-82 | 260 |
| MS.gene04978.t1 | MTR_4g010200 | 38.506 | 348 | 207 | 3 | 5 | 348 | 10 | 354 | 2.28e-77 | 248 |
| MS.gene04978.t1 | MTR_4g052970 | 39.144 | 327 | 190 | 4 | 25 | 348 | 29 | 349 | 1.23e-75 | 243 |
| MS.gene04978.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 26 | 351 | 27 | 350 | 2.40e-75 | 241 |
| MS.gene04978.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 26 | 351 | 27 | 350 | 3.26e-75 | 241 |
| MS.gene04978.t1 | MTR_4g114850 | 40.367 | 327 | 191 | 2 | 26 | 351 | 27 | 350 | 5.97e-75 | 241 |
| MS.gene04978.t1 | MTR_1g022160 | 39.938 | 323 | 189 | 3 | 22 | 342 | 21 | 340 | 1.15e-72 | 236 |
| MS.gene04978.t1 | MTR_4g084480 | 36.607 | 336 | 208 | 3 | 1 | 335 | 1 | 332 | 1.94e-71 | 232 |
| MS.gene04978.t1 | MTR_4g084480 | 36.607 | 336 | 208 | 3 | 1 | 335 | 8 | 339 | 3.00e-71 | 232 |
| MS.gene04978.t1 | MTR_1g077990 | 38.580 | 324 | 193 | 4 | 25 | 347 | 31 | 349 | 4.35e-71 | 232 |
| MS.gene04978.t1 | MTR_4g084480 | 36.607 | 336 | 208 | 3 | 1 | 335 | 8 | 339 | 4.36e-71 | 231 |
| MS.gene04978.t1 | MTR_1g007810 | 40.187 | 321 | 181 | 6 | 25 | 342 | 16 | 328 | 4.83e-70 | 228 |
| MS.gene04978.t1 | MTR_2g086530 | 38.390 | 323 | 192 | 3 | 25 | 346 | 8 | 324 | 8.21e-67 | 219 |
| MS.gene04978.t1 | MTR_2g086530 | 36.919 | 344 | 209 | 4 | 5 | 346 | 8 | 345 | 9.88e-67 | 220 |
| MS.gene04978.t1 | MTR_4g076500 | 35.345 | 348 | 209 | 4 | 4 | 346 | 53 | 389 | 9.31e-66 | 217 |
| MS.gene04978.t1 | MTR_4g076255 | 38.199 | 322 | 183 | 6 | 25 | 346 | 25 | 330 | 1.05e-65 | 215 |
| MS.gene04978.t1 | MTR_4g076490 | 36.420 | 324 | 191 | 5 | 25 | 348 | 97 | 405 | 4.67e-64 | 214 |
| MS.gene04978.t1 | MTR_3g116510 | 36.111 | 324 | 195 | 3 | 133 | 448 | 3 | 322 | 9.06e-64 | 210 |
| MS.gene04978.t1 | MTR_1g053320 | 32.391 | 460 | 277 | 16 | 5 | 447 | 15 | 457 | 1.14e-62 | 212 |
| MS.gene04978.t1 | MTR_2g019345 | 36.254 | 331 | 205 | 4 | 5 | 334 | 4 | 329 | 3.29e-62 | 208 |
| MS.gene04978.t1 | MTR_4g076470 | 36.795 | 337 | 191 | 8 | 1 | 335 | 1 | 317 | 5.72e-62 | 205 |
| MS.gene04978.t1 | MTR_4g076440 | 35.380 | 342 | 203 | 7 | 1 | 342 | 1 | 324 | 8.37e-62 | 205 |
| MS.gene04978.t1 | MTR_4g076430 | 34.971 | 346 | 207 | 7 | 1 | 346 | 1 | 328 | 8.69e-61 | 202 |
| MS.gene04978.t1 | MTR_1g010120 | 32.174 | 460 | 277 | 17 | 3 | 446 | 8 | 448 | 7.03e-60 | 204 |
| MS.gene04978.t1 | MTR_4g112025 | 31.169 | 462 | 287 | 17 | 4 | 447 | 9 | 457 | 1.43e-59 | 204 |
| MS.gene04978.t1 | MTR_7g081350 | 35.625 | 320 | 195 | 6 | 25 | 344 | 27 | 335 | 2.90e-59 | 199 |
| MS.gene04978.t1 | MTR_2g027560 | 32.192 | 438 | 272 | 13 | 22 | 446 | 25 | 450 | 3.18e-58 | 200 |
| MS.gene04978.t1 | MTR_4g076570 | 36.129 | 310 | 189 | 3 | 25 | 334 | 22 | 322 | 5.59e-58 | 196 |
| MS.gene04978.t1 | MTR_1g052430 | 37.097 | 310 | 186 | 4 | 25 | 334 | 32 | 332 | 1.02e-57 | 197 |
| MS.gene04978.t1 | MTR_2g034470 | 37.615 | 327 | 191 | 7 | 25 | 349 | 30 | 345 | 1.06e-56 | 192 |
| MS.gene04978.t1 | MTR_8g092070 | 29.773 | 440 | 281 | 15 | 23 | 447 | 32 | 458 | 5.56e-56 | 196 |
| MS.gene04978.t1 | MTR_2g034440 | 37.460 | 315 | 184 | 7 | 25 | 337 | 22 | 325 | 9.41e-56 | 189 |
| MS.gene04978.t1 | MTR_2g034470 | 37.421 | 318 | 186 | 7 | 34 | 349 | 4 | 310 | 1.03e-55 | 189 |
| MS.gene04978.t1 | MTR_2g034480 | 33.989 | 356 | 218 | 9 | 5 | 356 | 9 | 351 | 1.19e-54 | 187 |
| MS.gene04978.t1 | MTR_4g124440 | 30.769 | 442 | 262 | 20 | 28 | 446 | 31 | 451 | 4.40e-54 | 189 |
| MS.gene04978.t1 | MTR_3g031770 | 31.626 | 449 | 266 | 14 | 25 | 454 | 27 | 453 | 6.65e-54 | 189 |
| MS.gene04978.t1 | MTR_3g108600 | 31.579 | 437 | 252 | 16 | 25 | 446 | 31 | 435 | 4.79e-53 | 186 |
| MS.gene04978.t1 | MTR_7g085390 | 30.023 | 443 | 271 | 16 | 25 | 446 | 26 | 450 | 1.51e-52 | 185 |
| MS.gene04978.t1 | MTR_3g095050 | 29.764 | 467 | 295 | 18 | 7 | 455 | 13 | 464 | 2.01e-52 | 184 |
| MS.gene04978.t1 | MTR_6g032820 | 30.093 | 432 | 252 | 17 | 25 | 428 | 26 | 435 | 6.09e-48 | 171 |
| MS.gene04978.t1 | MTR_7g081370 | 31.875 | 320 | 194 | 7 | 25 | 344 | 28 | 323 | 1.79e-46 | 164 |
| MS.gene04978.t1 | MTR_5g081720 | 34.211 | 304 | 190 | 7 | 41 | 342 | 53 | 348 | 9.69e-43 | 156 |
| MS.gene04978.t1 | MTR_4g134280 | 29.938 | 324 | 197 | 13 | 137 | 446 | 29 | 336 | 1.01e-32 | 128 |
| MS.gene04978.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 359 | 480 | 34 | 152 | 1.42e-25 | 102 |
| MS.gene04978.t1 | MTR_8g089400 | 41.935 | 124 | 65 | 3 | 359 | 480 | 54 | 172 | 3.58e-25 | 102 |
| MS.gene04978.t1 | MTR_4g079530 | 39.437 | 142 | 74 | 3 | 358 | 489 | 33 | 172 | 6.81e-25 | 101 |
| MS.gene04978.t1 | MTR_4g079530 | 45.745 | 94 | 51 | 0 | 358 | 451 | 33 | 126 | 4.75e-23 | 94.7 |
| MS.gene04978.t1 | MTR_8g085390 | 37.815 | 119 | 71 | 2 | 340 | 456 | 6 | 123 | 1.49e-19 | 86.7 |
| MS.gene04978.t1 | MTR_8g085440 | 38.889 | 90 | 54 | 1 | 358 | 447 | 28 | 116 | 3.26e-19 | 83.6 |
| MS.gene04978.t1 | MTR_4g083070 | 40.367 | 109 | 55 | 3 | 344 | 451 | 11 | 110 | 3.88e-19 | 85.9 |
| MS.gene04978.t1 | MTR_7g111600 | 47.059 | 85 | 44 | 1 | 363 | 447 | 161 | 244 | 8.06e-19 | 86.7 |
| MS.gene04978.t1 | MTR_7g111600 | 47.059 | 85 | 44 | 1 | 363 | 447 | 161 | 244 | 1.41e-18 | 86.7 |
| MS.gene04978.t1 | MTR_7g111600 | 47.059 | 85 | 44 | 1 | 363 | 447 | 161 | 244 | 1.50e-18 | 86.7 |
| MS.gene04978.t1 | MTR_4g109490 | 48.810 | 84 | 41 | 2 | 363 | 446 | 25 | 106 | 2.00e-18 | 84.3 |
| MS.gene04978.t1 | MTR_5g097420 | 42.353 | 85 | 49 | 0 | 360 | 444 | 28 | 112 | 1.49e-17 | 79.0 |
| MS.gene04978.t1 | MTR_5g044530 | 40.404 | 99 | 56 | 2 | 353 | 449 | 13 | 110 | 2.28e-17 | 82.4 |
| MS.gene04978.t1 | MTR_4g133735 | 49.412 | 85 | 41 | 2 | 363 | 446 | 29 | 112 | 5.08e-17 | 77.4 |
| MS.gene04978.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 357 | 449 | 103 | 194 | 6.78e-17 | 79.3 |
| MS.gene04978.t1 | MTR_5g091650 | 40.860 | 93 | 54 | 1 | 357 | 449 | 103 | 194 | 8.01e-17 | 80.9 |
| MS.gene04978.t1 | MTR_8g085420 | 37.647 | 85 | 52 | 1 | 358 | 442 | 28 | 111 | 1.57e-16 | 76.6 |
| MS.gene04978.t1 | MTR_4g133730 | 42.857 | 84 | 48 | 0 | 363 | 446 | 29 | 112 | 3.05e-16 | 75.1 |
| MS.gene04978.t1 | MTR_2g049670 | 47.619 | 84 | 42 | 2 | 363 | 446 | 159 | 240 | 1.70e-15 | 77.8 |
| MS.gene04978.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 354 | 442 | 412 | 498 | 2.16e-15 | 79.3 |
| MS.gene04978.t1 | MTR_1g084820 | 43.820 | 89 | 48 | 2 | 354 | 442 | 412 | 498 | 2.72e-15 | 79.0 |
| MS.gene04978.t1 | MTR_3g048280 | 38.889 | 90 | 54 | 1 | 357 | 446 | 107 | 195 | 8.01e-15 | 73.6 |
| MS.gene04978.t1 | MTR_5g015720 | 43.023 | 86 | 46 | 2 | 363 | 446 | 330 | 414 | 7.38e-14 | 73.9 |
| MS.gene04978.t1 | MTR_4g036775 | 28.415 | 183 | 117 | 6 | 203 | 382 | 41 | 212 | 3.06e-13 | 69.3 |
| MS.gene04978.t1 | MTR_2g072500 | 36.782 | 87 | 53 | 1 | 360 | 446 | 6 | 90 | 4.77e-13 | 65.5 |
| MS.gene04978.t1 | MTR_4g036680 | 26.923 | 182 | 121 | 5 | 203 | 382 | 41 | 212 | 1.40e-12 | 67.4 |
| MS.gene04978.t1 | MTR_1g116870 | 36.905 | 84 | 52 | 1 | 363 | 446 | 277 | 359 | 6.63e-12 | 67.4 |
| MS.gene04978.t1 | MTR_8g085400 | 39.506 | 81 | 45 | 2 | 360 | 440 | 31 | 107 | 1.17e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04978.t1 | AT1G66250 | 67.086 | 477 | 150 | 2 | 19 | 489 | 26 | 501 | 0.0 | 683 |
| MS.gene04978.t1 | AT2G01630 | 66.813 | 455 | 141 | 3 | 21 | 466 | 19 | 472 | 0.0 | 644 |
| MS.gene04978.t1 | AT2G01630 | 68.571 | 420 | 132 | 0 | 21 | 440 | 19 | 438 | 0.0 | 627 |
| MS.gene04978.t1 | AT2G01630 | 69.169 | 373 | 115 | 0 | 21 | 393 | 19 | 391 | 0.0 | 556 |
| MS.gene04978.t1 | AT1G11820 | 56.552 | 435 | 189 | 0 | 20 | 454 | 39 | 473 | 0.0 | 539 |
| MS.gene04978.t1 | AT1G11820 | 56.057 | 421 | 185 | 0 | 20 | 440 | 39 | 459 | 0.0 | 516 |
| MS.gene04978.t1 | AT3G13560 | 53.396 | 427 | 198 | 1 | 24 | 450 | 25 | 450 | 2.36e-160 | 464 |
| MS.gene04978.t1 | AT3G13560 | 53.396 | 427 | 198 | 1 | 24 | 450 | 25 | 450 | 2.36e-160 | 464 |
| MS.gene04978.t1 | AT3G13560 | 53.396 | 427 | 198 | 1 | 24 | 450 | 25 | 450 | 2.36e-160 | 464 |
| MS.gene04978.t1 | AT3G13560 | 53.396 | 427 | 198 | 1 | 24 | 450 | 25 | 450 | 2.36e-160 | 464 |
| MS.gene04978.t1 | AT3G13560 | 53.396 | 427 | 198 | 1 | 24 | 450 | 25 | 450 | 2.36e-160 | 464 |
| MS.gene04978.t1 | AT1G11820 | 57.100 | 331 | 142 | 0 | 20 | 350 | 39 | 369 | 4.21e-138 | 403 |
| MS.gene04978.t1 | AT2G05790 | 41.518 | 448 | 234 | 3 | 25 | 447 | 25 | 469 | 5.06e-121 | 363 |
| MS.gene04978.t1 | AT4G26830 | 40.435 | 460 | 252 | 5 | 6 | 447 | 1 | 456 | 6.56e-117 | 352 |
| MS.gene04978.t1 | AT4G26830 | 40.132 | 456 | 260 | 4 | 1 | 447 | 1 | 452 | 7.91e-117 | 351 |
| MS.gene04978.t1 | AT5G55180 | 41.972 | 436 | 237 | 4 | 24 | 447 | 26 | 457 | 4.07e-116 | 350 |
| MS.gene04978.t1 | AT4G29360 | 39.914 | 466 | 244 | 3 | 25 | 457 | 27 | 489 | 2.96e-115 | 350 |
| MS.gene04978.t1 | AT4G29360 | 39.914 | 466 | 244 | 3 | 25 | 457 | 37 | 499 | 5.04e-115 | 350 |
| MS.gene04978.t1 | AT5G55180 | 41.860 | 430 | 234 | 4 | 24 | 441 | 26 | 451 | 2.82e-112 | 340 |
| MS.gene04978.t1 | AT5G56590 | 40.046 | 432 | 245 | 5 | 25 | 446 | 26 | 453 | 2.32e-111 | 339 |
| MS.gene04978.t1 | AT4G34480 | 38.106 | 454 | 260 | 6 | 3 | 447 | 7 | 448 | 3.32e-98 | 305 |
| MS.gene04978.t1 | AT2G16230 | 37.844 | 436 | 260 | 4 | 19 | 447 | 19 | 450 | 7.02e-97 | 301 |
| MS.gene04978.t1 | AT5G24318 | 37.844 | 436 | 249 | 10 | 22 | 444 | 27 | 453 | 1.35e-93 | 292 |
| MS.gene04978.t1 | AT3G07320 | 36.552 | 435 | 259 | 8 | 26 | 447 | 26 | 456 | 1.53e-92 | 289 |
| MS.gene04978.t1 | AT3G23770 | 35.909 | 440 | 261 | 6 | 25 | 447 | 37 | 472 | 2.16e-92 | 289 |
| MS.gene04978.t1 | AT5G24318 | 37.731 | 432 | 247 | 10 | 22 | 440 | 27 | 449 | 2.88e-91 | 285 |
| MS.gene04978.t1 | AT4G14080 | 34.096 | 437 | 270 | 6 | 25 | 447 | 42 | 474 | 8.52e-89 | 280 |
| MS.gene04978.t1 | AT3G55430 | 36.406 | 434 | 251 | 12 | 25 | 446 | 29 | 449 | 1.10e-82 | 263 |
| MS.gene04978.t1 | AT3G15800 | 40.000 | 325 | 190 | 3 | 26 | 348 | 44 | 365 | 4.30e-78 | 249 |
| MS.gene04978.t1 | AT2G26600 | 39.498 | 319 | 187 | 3 | 26 | 342 | 35 | 349 | 3.08e-74 | 239 |
| MS.gene04978.t1 | AT4G18340 | 36.901 | 355 | 218 | 4 | 2 | 355 | 12 | 361 | 2.58e-71 | 231 |
| MS.gene04978.t1 | AT4G18340 | 36.901 | 355 | 218 | 4 | 2 | 355 | 12 | 361 | 8.45e-71 | 231 |
| MS.gene04978.t1 | AT4G34480 | 38.506 | 348 | 207 | 3 | 3 | 349 | 7 | 348 | 1.41e-70 | 229 |
| MS.gene04978.t1 | AT2G39640 | 33.843 | 458 | 270 | 16 | 1 | 447 | 8 | 443 | 1.50e-70 | 234 |
| MS.gene04978.t1 | AT2G39640 | 35.106 | 94 | 60 | 1 | 357 | 450 | 455 | 547 | 4.25e-15 | 78.2 |
| MS.gene04978.t1 | AT1G32860 | 39.009 | 323 | 190 | 4 | 25 | 344 | 29 | 347 | 1.78e-70 | 231 |
| MS.gene04978.t1 | AT1G30080 | 39.185 | 319 | 189 | 3 | 25 | 342 | 36 | 350 | 2.24e-70 | 229 |
| MS.gene04978.t1 | AT1G30080 | 39.185 | 319 | 189 | 3 | 25 | 342 | 36 | 350 | 5.74e-70 | 229 |
| MS.gene04978.t1 | AT4G34480 | 38.953 | 344 | 192 | 5 | 113 | 447 | 3 | 337 | 1.12e-69 | 228 |
| MS.gene04978.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 25 | 348 | 29 | 350 | 1.28e-69 | 227 |
| MS.gene04978.t1 | AT2G27500 | 36.000 | 325 | 204 | 2 | 25 | 348 | 29 | 350 | 2.48e-69 | 227 |
| MS.gene04978.t1 | AT5G42720 | 37.101 | 345 | 212 | 3 | 5 | 347 | 6 | 347 | 2.56e-69 | 228 |
| MS.gene04978.t1 | AT4G16260 | 37.536 | 349 | 206 | 7 | 1 | 349 | 1 | 337 | 4.34e-69 | 224 |
| MS.gene04978.t1 | AT5G24318 | 38.272 | 324 | 189 | 6 | 22 | 342 | 27 | 342 | 6.30e-69 | 225 |
| MS.gene04978.t1 | AT5G24318 | 38.318 | 321 | 179 | 7 | 137 | 446 | 4 | 316 | 6.11e-68 | 221 |
| MS.gene04978.t1 | AT5G42100 | 39.264 | 326 | 190 | 5 | 25 | 346 | 27 | 348 | 1.37e-67 | 223 |
| MS.gene04978.t1 | AT5G42100 | 39.264 | 326 | 190 | 5 | 25 | 346 | 27 | 348 | 2.43e-67 | 223 |
| MS.gene04978.t1 | AT3G57270 | 38.871 | 319 | 184 | 5 | 25 | 342 | 27 | 335 | 1.53e-66 | 218 |
| MS.gene04978.t1 | AT4G16260 | 38.291 | 316 | 184 | 6 | 34 | 349 | 4 | 308 | 2.88e-66 | 216 |
| MS.gene04978.t1 | AT3G61810 | 36.036 | 333 | 202 | 4 | 18 | 347 | 48 | 372 | 1.98e-65 | 216 |
| MS.gene04978.t1 | AT3G57260 | 37.082 | 329 | 192 | 6 | 6 | 334 | 13 | 326 | 1.58e-61 | 204 |
| MS.gene04978.t1 | AT3G57260 | 37.082 | 329 | 192 | 6 | 6 | 334 | 29 | 342 | 3.59e-61 | 204 |
| MS.gene04978.t1 | AT5G58090 | 32.200 | 441 | 265 | 17 | 25 | 447 | 22 | 446 | 3.71e-61 | 207 |
| MS.gene04978.t1 | AT3G24330 | 32.403 | 466 | 277 | 18 | 1 | 447 | 19 | 465 | 1.62e-60 | 206 |
| MS.gene04978.t1 | AT4G31140 | 31.739 | 460 | 282 | 18 | 1 | 446 | 7 | 448 | 4.26e-59 | 202 |
| MS.gene04978.t1 | AT2G27500 | 36.727 | 275 | 170 | 2 | 75 | 348 | 1 | 272 | 1.11e-57 | 194 |
| MS.gene04978.t1 | AT2G26600 | 40.873 | 252 | 143 | 3 | 93 | 342 | 8 | 255 | 2.26e-57 | 192 |
| MS.gene04978.t1 | AT5G20870 | 33.407 | 452 | 251 | 21 | 25 | 447 | 30 | 460 | 1.10e-56 | 196 |
| MS.gene04978.t1 | AT3G04010 | 29.140 | 477 | 300 | 18 | 25 | 482 | 33 | 490 | 7.88e-56 | 194 |
| MS.gene04978.t1 | AT2G19440 | 30.786 | 458 | 282 | 18 | 7 | 447 | 6 | 445 | 1.28e-55 | 193 |
| MS.gene04978.t1 | AT2G19440 | 30.786 | 458 | 282 | 18 | 7 | 447 | 6 | 445 | 1.28e-55 | 193 |
| MS.gene04978.t1 | AT5G18220 | 29.530 | 447 | 279 | 15 | 25 | 451 | 30 | 460 | 8.02e-55 | 191 |
| MS.gene04978.t1 | AT4G17180 | 31.808 | 459 | 268 | 16 | 8 | 446 | 7 | 440 | 2.80e-54 | 189 |
| MS.gene04978.t1 | AT1G77780 | 31.378 | 341 | 222 | 7 | 3 | 342 | 1 | 330 | 7.74e-53 | 182 |
| MS.gene04978.t1 | AT5G58480 | 31.637 | 452 | 280 | 14 | 25 | 463 | 26 | 461 | 1.91e-52 | 184 |
| MS.gene04978.t1 | AT3G57240 | 35.714 | 322 | 191 | 8 | 25 | 346 | 35 | 340 | 5.05e-52 | 180 |
| MS.gene04978.t1 | AT3G55780 | 34.591 | 318 | 197 | 9 | 39 | 352 | 49 | 359 | 1.10e-51 | 180 |
| MS.gene04978.t1 | AT1G64760 | 30.159 | 441 | 274 | 16 | 25 | 447 | 25 | 449 | 1.04e-50 | 180 |
| MS.gene04978.t1 | AT1G64760 | 30.159 | 441 | 274 | 16 | 25 | 447 | 25 | 449 | 1.04e-50 | 180 |
| MS.gene04978.t1 | AT5G20330 | 35.185 | 324 | 193 | 7 | 25 | 344 | 34 | 344 | 1.30e-50 | 176 |
| MS.gene04978.t1 | AT5G20340 | 33.846 | 325 | 196 | 8 | 25 | 344 | 43 | 353 | 1.96e-49 | 173 |
| MS.gene04978.t1 | AT3G46570 | 36.223 | 323 | 192 | 9 | 25 | 342 | 27 | 340 | 7.65e-49 | 172 |
| MS.gene04978.t1 | AT5G20390 | 32.578 | 353 | 212 | 9 | 1 | 344 | 8 | 343 | 5.72e-48 | 169 |
| MS.gene04978.t1 | AT1G33220 | 31.138 | 334 | 213 | 6 | 1 | 329 | 8 | 329 | 2.16e-46 | 164 |
| MS.gene04978.t1 | AT5G64790 | 27.563 | 439 | 288 | 15 | 25 | 447 | 28 | 452 | 1.70e-45 | 166 |
| MS.gene04978.t1 | AT5G20560 | 32.551 | 341 | 206 | 8 | 6 | 335 | 8 | 335 | 1.30e-44 | 160 |
| MS.gene04978.t1 | AT1G77790 | 32.492 | 317 | 202 | 7 | 30 | 344 | 35 | 341 | 8.83e-43 | 155 |
| MS.gene04978.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 360 | 455 | 39 | 134 | 4.41e-25 | 102 |
| MS.gene04978.t1 | AT3G58100 | 45.833 | 96 | 52 | 0 | 360 | 455 | 115 | 210 | 1.52e-24 | 102 |
| MS.gene04978.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 358 | 449 | 19 | 110 | 1.47e-23 | 96.7 |
| MS.gene04978.t1 | AT1G66870 | 44.318 | 88 | 49 | 0 | 359 | 446 | 50 | 137 | 2.82e-23 | 95.9 |
| MS.gene04978.t1 | AT4G05430 | 44.565 | 92 | 51 | 0 | 358 | 449 | 44 | 135 | 4.76e-23 | 96.3 |
| MS.gene04978.t1 | AT1G66870 | 43.820 | 89 | 50 | 0 | 358 | 446 | 22 | 110 | 4.91e-23 | 94.4 |
| MS.gene04978.t1 | AT1G66852 | 46.067 | 89 | 47 | 1 | 358 | 446 | 22 | 109 | 1.39e-22 | 92.8 |
| MS.gene04978.t1 | AT5G63240 | 45.263 | 95 | 49 | 2 | 354 | 446 | 33 | 126 | 7.05e-22 | 91.7 |
| MS.gene04978.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 352 | 449 | 12 | 107 | 2.07e-21 | 90.5 |
| MS.gene04978.t1 | AT1G18650 | 42.857 | 98 | 54 | 2 | 352 | 449 | 12 | 107 | 4.37e-21 | 91.3 |
| MS.gene04978.t1 | AT4G05430 | 45.783 | 83 | 45 | 0 | 358 | 440 | 44 | 126 | 6.93e-21 | 89.0 |
| MS.gene04978.t1 | AT5G35740 | 39.785 | 93 | 55 | 1 | 355 | 446 | 23 | 115 | 2.18e-19 | 84.3 |
| MS.gene04978.t1 | AT5G61130 | 47.059 | 85 | 44 | 1 | 363 | 447 | 22 | 105 | 2.25e-19 | 86.7 |
| MS.gene04978.t1 | AT1G29380 | 44.944 | 89 | 48 | 1 | 363 | 451 | 149 | 236 | 2.80e-19 | 87.8 |
| MS.gene04978.t1 | AT5G08000 | 46.067 | 89 | 47 | 1 | 359 | 447 | 37 | 124 | 5.85e-19 | 85.9 |
| MS.gene04978.t1 | AT1G29380 | 45.238 | 84 | 45 | 1 | 363 | 446 | 149 | 231 | 6.11e-19 | 88.2 |
| MS.gene04978.t1 | AT1G66855 | 40.909 | 88 | 52 | 0 | 359 | 446 | 23 | 110 | 9.74e-19 | 82.0 |
| MS.gene04978.t1 | AT4G13600 | 42.045 | 88 | 50 | 1 | 363 | 450 | 62 | 148 | 2.44e-18 | 84.7 |
| MS.gene04978.t1 | AT2G30933 | 43.333 | 90 | 50 | 1 | 360 | 449 | 80 | 168 | 4.13e-18 | 84.0 |
| MS.gene04978.t1 | AT5G08000 | 47.059 | 85 | 44 | 1 | 363 | 447 | 22 | 105 | 5.90e-18 | 82.4 |
| MS.gene04978.t1 | AT2G04910 | 42.857 | 84 | 48 | 0 | 363 | 446 | 16 | 99 | 1.23e-17 | 79.0 |
| MS.gene04978.t1 | AT2G03505 | 39.362 | 94 | 54 | 2 | 361 | 452 | 20 | 112 | 1.63e-17 | 79.0 |
| MS.gene04978.t1 | AT2G43670 | 40.476 | 84 | 48 | 1 | 363 | 446 | 36 | 117 | 1.80e-17 | 79.0 |
| MS.gene04978.t1 | AT4G09462 | 32.710 | 107 | 71 | 1 | 340 | 446 | 7 | 112 | 3.35e-17 | 77.8 |
| MS.gene04978.t1 | AT4G09467 | 36.782 | 87 | 54 | 1 | 360 | 446 | 29 | 114 | 6.28e-17 | 77.0 |
| MS.gene04978.t1 | AT4G09464 | 36.782 | 87 | 54 | 1 | 360 | 446 | 29 | 114 | 6.28e-17 | 77.0 |
| MS.gene04978.t1 | AT5G63250 | 40.698 | 86 | 49 | 1 | 363 | 446 | 43 | 128 | 7.56e-17 | 77.4 |
| MS.gene04978.t1 | AT1G78520 | 38.462 | 91 | 54 | 1 | 356 | 446 | 26 | 114 | 7.58e-17 | 77.0 |
| MS.gene04978.t1 | AT4G09465 | 36.782 | 87 | 54 | 1 | 360 | 446 | 29 | 114 | 9.01e-17 | 76.6 |
| MS.gene04978.t1 | AT4G16165 | 33.019 | 106 | 68 | 1 | 341 | 446 | 8 | 110 | 1.26e-16 | 76.3 |
| MS.gene04978.t1 | AT1G09460 | 44.944 | 89 | 46 | 2 | 358 | 446 | 133 | 218 | 1.50e-16 | 81.3 |
| MS.gene04978.t1 | AT1G29380 | 43.210 | 81 | 45 | 1 | 363 | 443 | 149 | 228 | 2.38e-16 | 78.6 |
| MS.gene04978.t1 | AT1G29380 | 43.210 | 81 | 45 | 1 | 363 | 443 | 149 | 228 | 2.38e-16 | 78.6 |
| MS.gene04978.t1 | AT2G03505 | 39.560 | 91 | 52 | 2 | 361 | 449 | 20 | 109 | 3.35e-16 | 76.6 |
| MS.gene04978.t1 | AT2G03505 | 39.560 | 91 | 52 | 2 | 361 | 449 | 20 | 109 | 3.35e-16 | 76.6 |
| MS.gene04978.t1 | AT2G03505 | 39.560 | 91 | 52 | 2 | 361 | 449 | 20 | 109 | 3.35e-16 | 76.6 |
| MS.gene04978.t1 | AT4G09090 | 38.095 | 84 | 51 | 1 | 363 | 446 | 32 | 114 | 3.77e-16 | 75.1 |
| MS.gene04978.t1 | AT5G63225 | 40.476 | 84 | 49 | 1 | 363 | 446 | 26 | 108 | 1.26e-15 | 73.2 |
| MS.gene04978.t1 | AT5G67460 | 40.476 | 84 | 50 | 0 | 363 | 446 | 294 | 377 | 2.24e-15 | 78.2 |
| MS.gene04978.t1 | AT2G04910 | 40.506 | 79 | 47 | 0 | 363 | 441 | 16 | 94 | 3.62e-15 | 72.4 |
| MS.gene04978.t1 | AT5G63230 | 42.667 | 75 | 42 | 1 | 372 | 446 | 36 | 109 | 6.19e-15 | 71.2 |
| MS.gene04978.t1 | AT4G09466 | 34.483 | 87 | 56 | 1 | 360 | 446 | 29 | 114 | 7.85e-15 | 71.2 |
| MS.gene04978.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 360 | 440 | 80 | 159 | 9.61e-15 | 72.4 |
| MS.gene04978.t1 | AT2G30933 | 41.975 | 81 | 46 | 1 | 360 | 440 | 80 | 159 | 9.61e-15 | 72.4 |
| MS.gene04978.t1 | AT5G53610 | 36.782 | 87 | 53 | 1 | 360 | 446 | 26 | 110 | 2.57e-14 | 69.7 |
| MS.gene04978.t1 | AT5G67460 | 41.026 | 78 | 46 | 0 | 363 | 440 | 294 | 371 | 1.01e-13 | 73.2 |
| MS.gene04978.t1 | AT5G53600 | 37.778 | 90 | 54 | 1 | 357 | 446 | 24 | 111 | 1.52e-13 | 67.4 |
| MS.gene04978.t1 | AT1G13830 | 35.556 | 90 | 55 | 2 | 359 | 446 | 32 | 120 | 6.59e-12 | 65.5 |
| MS.gene04978.t1 | AT1G69295 | 39.024 | 82 | 48 | 2 | 362 | 443 | 21 | 100 | 1.72e-11 | 64.3 |
| MS.gene04978.t1 | AT1G69295 | 39.024 | 82 | 48 | 2 | 362 | 443 | 17 | 96 | 2.12e-11 | 63.9 |
| MS.gene04978.t1 | AT2G43660 | 30.000 | 110 | 74 | 1 | 340 | 446 | 9 | 118 | 2.92e-11 | 61.2 |
| MS.gene04978.t1 | AT1G13830 | 35.632 | 87 | 53 | 2 | 362 | 446 | 21 | 106 | 3.43e-11 | 63.2 |
| MS.gene04978.t1 | AT2G29735 | 32.558 | 86 | 55 | 2 | 363 | 446 | 32 | 116 | 4.95e-11 | 60.5 |
| MS.gene04978.t1 | AT2G43660 | 33.721 | 86 | 57 | 0 | 361 | 446 | 34 | 119 | 6.06e-11 | 60.5 |
Find 97 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCCACGGCTTCAAAT+TGG | 0.207193 | 3.3:+58927898 | MS.gene04978:CDS |
| TGCATTGCAGAACCATTTAT+TGG | 0.207713 | 3.3:+58927687 | MS.gene04978:intron |
| GGATTGTTCTCCGTTGTTTC+AGG | 0.245746 | 3.3:+58928793 | MS.gene04978:CDS |
| GATTCTTTGTTTGGTGGAAT+TGG | 0.284643 | 3.3:-58928290 | None:intergenic |
| GACAGGTTCAGGTGCAGTTT+TGG | 0.286527 | 3.3:+58928670 | MS.gene04978:CDS |
| CCAATGTTCACCCCAATAAA+TGG | 0.315368 | 3.3:-58927699 | None:intergenic |
| TGTGATAGGACTTCTAATAT+TGG | 0.322418 | 3.3:+58929631 | MS.gene04978:CDS |
| ATTGCTAGAAGCTCTTCATT+AGG | 0.332221 | 3.3:-58927867 | None:intergenic |
| GCATTGCAGAACCATTTATT+GGG | 0.336407 | 3.3:+58927688 | MS.gene04978:intron |
| GCATGAGCAACAACATTATC+AGG | 0.341654 | 3.3:-58928833 | None:intergenic |
| GAATCAATAGATTCTTTGTT+TGG | 0.344151 | 3.3:-58928299 | None:intergenic |
| AAGCATGTGTTAAATAAAAC+TGG | 0.346040 | 3.3:+58928509 | MS.gene04978:CDS |
| CACGGTTCTTGTATATTTCC+AGG | 0.363901 | 3.3:+58929416 | MS.gene04978:CDS |
| TTGCTAGAAGCTCTTCATTA+GGG | 0.363916 | 3.3:-58927866 | None:intergenic |
| AAATGTGATGGTGCAGGGGC+AGG | 0.372606 | 3.3:-58929557 | None:intergenic |
| CTCAAATGGTGTAATCCCTT+TGG | 0.373818 | 3.3:+58928250 | MS.gene04978:CDS |
| AGAAGCCTTCTAATTGTGAT+AGG | 0.384591 | 3.3:+58929617 | MS.gene04978:CDS |
| TGATGCTTATTATCATAAGA+TGG | 0.388926 | 3.3:+58928868 | MS.gene04978:CDS |
| CCTGTGGTGGTGACCGAAAC+TGG | 0.396231 | 3.3:+58928410 | MS.gene04978:CDS |
| AAATTCCACGGCTTCAAATT+GGG | 0.400489 | 3.3:+58927899 | MS.gene04978:CDS |
| ATGTGATGGTGCAGGGGCAG+GGG | 0.412267 | 3.3:-58929555 | None:intergenic |
| TCCACAGGCCCAATCTATTC+CGG | 0.413606 | 3.3:-58928759 | None:intergenic |
| ACACTAATTCCAGGGCGCTT+TGG | 0.414053 | 3.3:-58928536 | None:intergenic |
| GTCAATTGCAAAACATAAAC+AGG | 0.417333 | 3.3:-58928650 | None:intergenic |
| TGTTGCAGGCCGGAATAGAT+TGG | 0.421134 | 3.3:+58928750 | MS.gene04978:CDS |
| TAAGTACTAACACTAATTCC+AGG | 0.422207 | 3.3:-58928545 | None:intergenic |
| GAAGTCCTATCACAATTAGA+AGG | 0.426705 | 3.3:-58929622 | None:intergenic |
| CTAACAGCACTATCAAAATC+AGG | 0.428623 | 3.3:+58927822 | MS.gene04978:CDS |
| AATGTGATGGTGCAGGGGCA+GGG | 0.433832 | 3.3:-58929556 | None:intergenic |
| TGGGGACTATTTGATTCAAA+TGG | 0.440232 | 3.3:+58928623 | MS.gene04978:CDS |
| GAATCAAGTATGATGGTAGA+AGG | 0.444776 | 3.3:-58928101 | None:intergenic |
| GAGTCCATGTAGTCATAGTA+AGG | 0.444995 | 3.3:-58928230 | None:intergenic |
| TACAACGAGGACAAACAGCC+AGG | 0.445369 | 3.3:+58928581 | MS.gene04978:CDS |
| TGATTCATTTCCACCTTCAC+AGG | 0.448300 | 3.3:+58928118 | MS.gene04978:CDS |
| ATAGATTGGGCCTGTGGACC+TGG | 0.455465 | 3.3:+58928764 | MS.gene04978:CDS |
| GATTGTTCTCCGTTGTTTCA+GGG | 0.467335 | 3.3:+58928794 | MS.gene04978:CDS |
| ATAGTGCTGTTAGCATAGCT+TGG | 0.468643 | 3.3:-58927812 | None:intergenic |
| ATTCCGGCCTGCAACATCTT+CGG | 0.470894 | 3.3:-58928743 | None:intergenic |
| AGCAATTTGCGTTGGTTCTG+AGG | 0.472822 | 3.3:+58927965 | MS.gene04978:CDS |
| TGCAGTATCTACTACTGTTG+TGG | 0.481927 | 3.3:+58926314 | MS.gene04978:CDS |
| GATGCTTATTATCATAAGAT+GGG | 0.483558 | 3.3:+58928869 | MS.gene04978:CDS |
| GCATTGGCAAGTGTTGCATT+AGG | 0.485145 | 3.3:-58928461 | None:intergenic |
| TGCTGATCCGAAGATGTTGC+AGG | 0.486932 | 3.3:+58928736 | MS.gene04978:CDS |
| ATTCAGTGATGTGTTAAAGA+AGG | 0.489701 | 3.3:-58928141 | None:intergenic |
| TATGACTACATGGACTCAAA+TGG | 0.493197 | 3.3:+58928236 | MS.gene04978:CDS |
| CCATTTATTGGGGTGAACAT+TGG | 0.494081 | 3.3:+58927699 | MS.gene04978:CDS |
| CCAGTTTCGGTCACCACCAC+AGG | 0.495771 | 3.3:-58928410 | None:intergenic |
| AGGACTTCTAATATTGGAAG+TGG | 0.502042 | 3.3:+58929637 | MS.gene04978:CDS |
| GCAAATTGCTGTGATATTTG+TGG | 0.503031 | 3.3:-58927952 | None:intergenic |
| ACTGGAACTCCAAAGCGCCC+TGG | 0.512813 | 3.3:+58928527 | MS.gene04978:CDS |
| GTTGCAGGCCGGAATAGATT+GGG | 0.514828 | 3.3:+58928751 | MS.gene04978:CDS |
| AATGAAGAGCTTCTAGCAAT+CGG | 0.520166 | 3.3:+58927870 | MS.gene04978:CDS |
| GATCAAGATTCGACGCGACA+AGG | 0.520485 | 3.3:-58928052 | None:intergenic |
| TGGAAATGAATCAAGTATGA+TGG | 0.522752 | 3.3:-58928108 | None:intergenic |
| TTGGGTTTCTCACAATGTGT+TGG | 0.524943 | 3.3:+58927917 | MS.gene04978:CDS |
| TCAATAGATTCTTTGTTTGG+TGG | 0.525317 | 3.3:-58928296 | None:intergenic |
| GAAACTGGTTGGCCTTCAAA+AGG | 0.527329 | 3.3:+58928425 | MS.gene04978:CDS |
| TGAAGAGTGCATAATCCAAA+GGG | 0.538133 | 3.3:-58928265 | None:intergenic |
| TTACCCTTACTATGACTACA+TGG | 0.538605 | 3.3:+58928226 | MS.gene04978:CDS |
| GTGAGGCATGTCTGAGAGAT+CGG | 0.540893 | 3.3:-58927724 | None:intergenic |
| GCTGTTGTAAGTATTAGCAT+TGG | 0.543285 | 3.3:-58928477 | None:intergenic |
| ACTACTGTTGTGGCTGATGA+AGG | 0.546285 | 3.3:+58926324 | MS.gene04978:CDS |
| GCCGGAATAGATTGGGCCTG+TGG | 0.552796 | 3.3:+58928758 | MS.gene04978:CDS |
| GTTCTTGTATATTTCCAGGA+AGG | 0.555329 | 3.3:+58929420 | MS.gene04978:CDS |
| TGAGTAATGAAGAAGTGTGT+TGG | 0.555345 | 3.3:-58928321 | None:intergenic |
| ATTGCTGTGATATTTGTGGC+TGG | 0.559043 | 3.3:-58927948 | None:intergenic |
| GGCCTGTGGACCTGGAAAAG+TGG | 0.561864 | 3.3:+58928772 | MS.gene04978:CDS |
| GATTGCAAGAAATCAAGCAT+TGG | 0.564353 | 3.3:-58928176 | None:intergenic |
| ATCAAGATTCGACGCGACAA+GGG | 0.568686 | 3.3:-58928051 | None:intergenic |
| AGAAACCCAATTTGAAGCCG+TGG | 0.571835 | 3.3:-58927904 | None:intergenic |
| AGCAGTGCTACTACTTGAGT+AGG | 0.573355 | 3.3:-58927747 | None:intergenic |
| TGACTTACTTGGATCTGAAG+TGG | 0.578075 | 3.3:-58928936 | None:intergenic |
| TGAAACTCATTGTGTTGCTA+AGG | 0.585498 | 3.3:+58928709 | MS.gene04978:CDS |
| AATATCACAGCAATTTGCGT+TGG | 0.586773 | 3.3:+58927957 | MS.gene04978:CDS |
| TTGAAGAGTGCATAATCCAA+AGG | 0.590631 | 3.3:-58928266 | None:intergenic |
| CATTGCAGAACCATTTATTG+GGG | 0.592068 | 3.3:+58927689 | MS.gene04978:intron |
| GATCCGAAGATGTTGCAGGC+CGG | 0.593184 | 3.3:+58928740 | MS.gene04978:CDS |
| GGTCACCACCACAGGAATGT+TGG | 0.595403 | 3.3:-58928402 | None:intergenic |
| AATCGGTCAATCAAATTCCA+CGG | 0.611906 | 3.3:+58927887 | MS.gene04978:CDS |
| TTAAAGAAGGCCTGTGAAGG+TGG | 0.612595 | 3.3:-58928128 | None:intergenic |
| GCAGTGCTACTACTTGAGTA+GGG | 0.617916 | 3.3:-58927746 | None:intergenic |
| GCTACTACTTGAGTAGGGTG+AGG | 0.620961 | 3.3:-58927741 | None:intergenic |
| AAGTACTAACACTAATTCCA+GGG | 0.623959 | 3.3:-58928544 | None:intergenic |
| ACATTATCAGGATCATAGCA+TGG | 0.626154 | 3.3:-58928821 | None:intergenic |
| AGTCCATGTAGTCATAGTAA+GGG | 0.626629 | 3.3:-58928229 | None:intergenic |
| TGGTGGTGACCGAAACTGGT+TGG | 0.626781 | 3.3:+58928414 | MS.gene04978:CDS |
| AAGCATGAGATAAGATTGAG+TGG | 0.629287 | 3.3:-58928198 | None:intergenic |
| ACAACGAGGACAAACAGCCA+GGG | 0.633838 | 3.3:+58928582 | MS.gene04978:CDS |
| GTCATGTAACTTCAATGACA+TGG | 0.644238 | 3.3:+58928904 | MS.gene04978:CDS |
| AAGAAGAAAATGCATAACCA+TGG | 0.646101 | 3.3:-58926280 | None:intergenic |
| ACTCATTGTGTTGCTAAGGA+TGG | 0.646912 | 3.3:+58928713 | MS.gene04978:CDS |
| AGTATGATGGTAGAAGGAAG+CGG | 0.649247 | 3.3:-58928095 | None:intergenic |
| GTGTTAAAGAAGGCCTGTGA+AGG | 0.655577 | 3.3:-58928131 | None:intergenic |
| GAATTACACCAACATTCCTG+TGG | 0.686919 | 3.3:+58928394 | MS.gene04978:CDS |
| CAACGAGGACAAACAGCCAG+GGG | 0.691863 | 3.3:+58928583 | MS.gene04978:CDS |
| TTACACCAACATTCCTGTGG+TGG | 0.712696 | 3.3:+58928397 | MS.gene04978:CDS |
| TATATACGAGCTCTACAACG+AGG | 0.776647 | 3.3:+58928568 | MS.gene04978:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATTCGATAAAAAA+AGG | + | chr3.3:58926554-58926573 | MS.gene04978:intron | 15.0% |
| !! | AAGAAAATTCGATAAAAAAA+GGG | + | chr3.3:58926555-58926574 | MS.gene04978:intron | 15.0% |
| !! | AGAAAGAAAAAAAAAACTAA+TGG | + | chr3.3:58927021-58927040 | MS.gene04978:intron | 15.0% |
| !! | ATCTATTAAATATGATGATA+GGG | + | chr3.3:58927134-58927153 | MS.gene04978:intron | 15.0% |
| !! | GAAAGAAAAAAAAAACTAAT+GGG | + | chr3.3:58927022-58927041 | MS.gene04978:intron | 15.0% |
| !! | GTATCAAAATAAAACTATTT+AGG | - | chr3.3:58929151-58929170 | None:intergenic | 15.0% |
| !!! | AATAAAACATGTTTATGTTT+TGG | + | chr3.3:58926432-58926451 | MS.gene04978:intron | 15.0% |
| !!! | TTTTTGAGAATTTTTTAACT+CGG | + | chr3.3:58929066-58929085 | MS.gene04978:intron | 15.0% |
| !! | AGAAAATTCGATAAAAAAAG+GGG | + | chr3.3:58926556-58926575 | MS.gene04978:intron | 20.0% |
| !! | ATGTGAGTATTTGAAAAATA+TGG | - | chr3.3:58927317-58927336 | None:intergenic | 20.0% |
| !! | CTAATATAGCTCAAAAAAAT+TGG | + | chr3.3:58926952-58926971 | MS.gene04978:intron | 20.0% |
| !! | CTTTGTATATTATTCATTGT+TGG | + | chr3.3:58926371-58926390 | MS.gene04978:intron | 20.0% |
| !! | GATCTATTAAATATGATGAT+AGG | + | chr3.3:58927133-58927152 | MS.gene04978:intron | 20.0% |
| !! | TATTTGAAAAATATGGTTGA+AGG | - | chr3.3:58927310-58927329 | None:intergenic | 20.0% |
| !!! | TTTTGTTCTTAAATGTGTAA+AGG | + | chr3.3:58927401-58927420 | MS.gene04978:intron | 20.0% |
| ! | AAAATCCTACAAAAAAAGGT+GGG | - | chr3.3:58926630-58926649 | None:intergenic | 25.0% |
| ! | AAACATGCTTTCTAACAAAA+GGG | - | chr3.3:58926503-58926522 | None:intergenic | 25.0% |
| ! | AAGCATGTGTTAAATAAAAC+TGG | + | chr3.3:58928509-58928528 | MS.gene04978:CDS | 25.0% |
| ! | AAGTAAAGTTGAAATGAAGA+TGG | + | chr3.3:58927049-58927068 | MS.gene04978:intron | 25.0% |
| ! | AATCACAAAGAAAAACACAA+GGG | - | chr3.3:58926655-58926674 | None:intergenic | 25.0% |
| ! | ACTAATGAAAGATACATTTG+AGG | - | chr3.3:58927534-58927553 | None:intergenic | 25.0% |
| ! | AGTAAAGTTGAAATGAAGAT+GGG | + | chr3.3:58927050-58927069 | MS.gene04978:intron | 25.0% |
| ! | ATCCAATTCATATGTATTGT+CGG | - | chr3.3:58929311-58929330 | None:intergenic | 25.0% |
| ! | GAATCAATAGATTCTTTGTT+TGG | - | chr3.3:58928302-58928321 | None:intergenic | 25.0% |
| ! | GATGCTTATTATCATAAGAT+GGG | + | chr3.3:58928869-58928888 | MS.gene04978:CDS | 25.0% |
| ! | TAAACATGCTTTCTAACAAA+AGG | - | chr3.3:58926504-58926523 | None:intergenic | 25.0% |
| ! | TAGGTAAAATATATGTAACG+AGG | - | chr3.3:58927609-58927628 | None:intergenic | 25.0% |
| ! | TATTAAATATGATGATAGGG+TGG | + | chr3.3:58927137-58927156 | MS.gene04978:intron | 25.0% |
| ! | TGATGCTTATTATCATAAGA+TGG | + | chr3.3:58928868-58928887 | MS.gene04978:CDS | 25.0% |
| ! | TTTCGTAATATCAAAGTGAA+AGG | - | chr3.3:58928962-58928981 | None:intergenic | 25.0% |
| !! | AAAGTTTGAAACCCTAATTA+GGG | + | chr3.3:58926764-58926783 | MS.gene04978:intron | 25.0% |
| !! | AATGATTTATCGATTGTGAT+TGG | + | chr3.3:58929261-58929280 | MS.gene04978:intron | 25.0% |
| !! | AGATGCATTTATGTATGTTT+TGG | - | chr3.3:58927462-58927481 | None:intergenic | 25.0% |
| !! | TTCAAGTATAGTCAAGTTTT+AGG | - | chr3.3:58927628-58927647 | None:intergenic | 25.0% |
| !! | TTCTTTCTTTATTGCACTTT+TGG | - | chr3.3:58927009-58927028 | None:intergenic | 25.0% |
| !!! | AAATTTTGGAGAAAATTGGT+AGG | + | chr3.3:58926893-58926912 | MS.gene04978:intron | 25.0% |
| !!! | AATTTTGGAGAAAATTGGTA+GGG | + | chr3.3:58926894-58926913 | MS.gene04978:intron | 25.0% |
| !!! | GTGTAAATTTTGGAGAAAAT+TGG | + | chr3.3:58926889-58926908 | MS.gene04978:intron | 25.0% |
| AAATCCTACAAAAAAAGGTG+GGG | - | chr3.3:58926629-58926648 | None:intergenic | 30.0% | |
| AACATGCTTTCTAACAAAAG+GGG | - | chr3.3:58926502-58926521 | None:intergenic | 30.0% | |
| AACGATGTCAAGCATAAATT+TGG | - | chr3.3:58926697-58926716 | None:intergenic | 30.0% | |
| AAGTACTAACACTAATTCCA+GGG | - | chr3.3:58928547-58928566 | None:intergenic | 30.0% | |
| AATAGATCTAAATACTGCAG+TGG | - | chr3.3:58927121-58927140 | None:intergenic | 30.0% | |
| ACGATGTCAAGCATAAATTT+GGG | - | chr3.3:58926696-58926715 | None:intergenic | 30.0% | |
| AGGATATTCTGAATGATTGT+AGG | + | chr3.3:58929392-58929411 | MS.gene04978:intron | 30.0% | |
| ATTCAGTGATGTGTTAAAGA+AGG | - | chr3.3:58928144-58928163 | None:intergenic | 30.0% | |
| CAAAATCCTACAAAAAAAGG+TGG | - | chr3.3:58926631-58926650 | None:intergenic | 30.0% | |
| CACTTTGATATTACGAAAGA+GGG | + | chr3.3:58928964-58928983 | MS.gene04978:intron | 30.0% | |
| CTAATTAGGGTTTCAAACTT+TGG | - | chr3.3:58926765-58926784 | None:intergenic | 30.0% | |
| GAATCACAAAGAAAAACACA+AGG | - | chr3.3:58926656-58926675 | None:intergenic | 30.0% | |
| GGTCAAAATCCTACAAAAAA+AGG | - | chr3.3:58926634-58926653 | None:intergenic | 30.0% | |
| GTAAAGTTGAAATGAAGATG+GGG | + | chr3.3:58927051-58927070 | MS.gene04978:intron | 30.0% | |
| GTCAATAAATTACACCATCT+CGG | + | chr3.3:58926867-58926886 | MS.gene04978:intron | 30.0% | |
| GTCAATTGCAAAACATAAAC+AGG | - | chr3.3:58928653-58928672 | None:intergenic | 30.0% | |
| TAAGTACTAACACTAATTCC+AGG | - | chr3.3:58928548-58928567 | None:intergenic | 30.0% | |
| TCACTTTGATATTACGAAAG+AGG | + | chr3.3:58928963-58928982 | MS.gene04978:intron | 30.0% | |
| TGGAAATGAATCAAGTATGA+TGG | - | chr3.3:58928111-58928130 | None:intergenic | 30.0% | |
| TGTGATAGGACTTCTAATAT+TGG | + | chr3.3:58929631-58929650 | MS.gene04978:CDS | 30.0% | |
| ! | AAAGGGGTTAATTGTGTTTT+TGG | + | chr3.3:58926572-58926591 | MS.gene04978:intron | 30.0% |
| ! | AAATAGTCCCCAATTTTTCT+CGG | - | chr3.3:58928615-58928634 | None:intergenic | 30.0% |
| ! | ACTAAGACTTTTGCTACATT+TGG | - | chr3.3:58928005-58928024 | None:intergenic | 30.0% |
| ! | CAAAGTTTGAAACCCTAATT+AGG | + | chr3.3:58926763-58926782 | MS.gene04978:intron | 30.0% |
| ! | CTAAGACTTTTGCTACATTT+GGG | - | chr3.3:58928004-58928023 | None:intergenic | 30.0% |
| ! | GTTTATGTTTTGCAATTGAC+AGG | + | chr3.3:58928653-58928672 | MS.gene04978:CDS | 30.0% |
| ! | TCAATAGATTCTTTGTTTGG+TGG | - | chr3.3:58928299-58928318 | None:intergenic | 30.0% |
| ! | TGCGTCTTTTATAGTTAGTT+TGG | + | chr3.3:58927507-58927526 | MS.gene04978:intron | 30.0% |
| !! | ATTTTGGAGAAAATTGGTAG+GGG | + | chr3.3:58926895-58926914 | MS.gene04978:intron | 30.0% |
| !! | GAAAAATGTTTTTACCTTCC+TGG | - | chr3.3:58929437-58929456 | None:intergenic | 30.0% |
| !! | GTTTTGGCAAATGATACAAA+AGG | + | chr3.3:58928686-58928705 | MS.gene04978:CDS | 30.0% |
| !!! | CATGTTTATGTTTTGGTGTT+TGG | + | chr3.3:58926439-58926458 | MS.gene04978:intron | 30.0% |
| !!! | TCAGAAAAGCTTACTTTTTG+AGG | + | chr3.3:58927239-58927258 | MS.gene04978:intron | 30.0% |
| AAAGTGAAAGGTGACTTACT+TGG | - | chr3.3:58928950-58928969 | None:intergenic | 35.0% | |
| AAATTCCACGGCTTCAAATT+GGG | + | chr3.3:58927899-58927918 | MS.gene04978:CDS | 35.0% | |
| AACTCGATAGAAAAGCTGTT+TGG | - | chr3.3:58926734-58926753 | None:intergenic | 35.0% | |
| AAGCATGAGATAAGATTGAG+TGG | - | chr3.3:58928201-58928220 | None:intergenic | 35.0% | |
| AATATCACAGCAATTTGCGT+TGG | + | chr3.3:58927957-58927976 | MS.gene04978:CDS | 35.0% | |
| AATCGCACAATTGTGATACT+TGG | + | chr3.3:58926981-58927000 | MS.gene04978:intron | 35.0% | |
| AATCGGTCAATCAAATTCCA+CGG | + | chr3.3:58927887-58927906 | MS.gene04978:CDS | 35.0% | |
| AATGAAGAGCTTCTAGCAAT+CGG | + | chr3.3:58927870-58927889 | MS.gene04978:CDS | 35.0% | |
| AATTAGGGATTTCGCTTTCA+TGG | + | chr3.3:58926779-58926798 | MS.gene04978:intron | 35.0% | |
| ACATTATCAGGATCATAGCA+TGG | - | chr3.3:58928824-58928843 | None:intergenic | 35.0% | |
| ACGCTTGTAAGCGAAAATAT+TGG | - | chr3.3:58929497-58929516 | None:intergenic | 35.0% | |
| ACTACACATATCAAACTGTG+AGG | - | chr3.3:58927188-58927207 | None:intergenic | 35.0% | |
| ACTCGATAGAAAAGCTGTTT+GGG | - | chr3.3:58926733-58926752 | None:intergenic | 35.0% | |
| AGAAGCCTTCTAATTGTGAT+AGG | + | chr3.3:58929617-58929636 | MS.gene04978:CDS | 35.0% | |
| AGGACTTCTAATATTGGAAG+TGG | + | chr3.3:58929637-58929656 | MS.gene04978:CDS | 35.0% | |
| AGGGGACTACAAAATTACAA+AGG | + | chr3.3:58926913-58926932 | MS.gene04978:intron | 35.0% | |
| AGTCCATGTAGTCATAGTAA+GGG | - | chr3.3:58928232-58928251 | None:intergenic | 35.0% | |
| ATCGCACAATTGTGATACTT+GGG | + | chr3.3:58926982-58927001 | MS.gene04978:intron | 35.0% | |
| ATTAGGGATTTCGCTTTCAT+GGG | + | chr3.3:58926780-58926799 | MS.gene04978:intron | 35.0% | |
| ATTGCTAGAAGCTCTTCATT+AGG | - | chr3.3:58927870-58927889 | None:intergenic | 35.0% | |
| CATTGCAGAACCATTTATTG+GGG | + | chr3.3:58927689-58927708 | MS.gene04978:intron | 35.0% | |
| CGATGTCAAGCATAAATTTG+GGG | - | chr3.3:58926695-58926714 | None:intergenic | 35.0% | |
| CTAACAGCACTATCAAAATC+AGG | + | chr3.3:58927822-58927841 | MS.gene04978:CDS | 35.0% | |
| CTACACATATCAAACTGTGA+GGG | - | chr3.3:58927187-58927206 | None:intergenic | 35.0% | |
| CTAGTATCATAGTCTGACTA+AGG | + | chr3.3:58929372-58929391 | MS.gene04978:intron | 35.0% | |
| CTCCGACAATACATATGAAT+TGG | + | chr3.3:58929306-58929325 | MS.gene04978:intron | 35.0% | |
| GAAAGCGAAATCCCTAATTA+GGG | - | chr3.3:58926778-58926797 | None:intergenic | 35.0% | |
| GAAGTCCTATCACAATTAGA+AGG | - | chr3.3:58929625-58929644 | None:intergenic | 35.0% | |
| GAATCAAGTATGATGGTAGA+AGG | - | chr3.3:58928104-58928123 | None:intergenic | 35.0% | |
| GATGTCAAGCATAAATTTGG+GGG | - | chr3.3:58926694-58926713 | None:intergenic | 35.0% | |
| GATTGCAAGAAATCAAGCAT+TGG | - | chr3.3:58928179-58928198 | None:intergenic | 35.0% | |
| GCAAATTGCTGTGATATTTG+TGG | - | chr3.3:58927955-58927974 | None:intergenic | 35.0% | |
| GCATCTTTCGTTAGTCAATT+TGG | + | chr3.3:58927476-58927495 | MS.gene04978:intron | 35.0% | |
| GCATTGCAGAACCATTTATT+GGG | + | chr3.3:58927688-58927707 | MS.gene04978:intron | 35.0% | |
| GCTGTTGTAAGTATTAGCAT+TGG | - | chr3.3:58928480-58928499 | None:intergenic | 35.0% | |
| GGGACTACAAAATTACAAAG+GGG | + | chr3.3:58926915-58926934 | MS.gene04978:intron | 35.0% | |
| GGGGACTACAAAATTACAAA+GGG | + | chr3.3:58926914-58926933 | MS.gene04978:intron | 35.0% | |
| GTCATGTAACTTCAATGACA+TGG | + | chr3.3:58928904-58928923 | MS.gene04978:CDS | 35.0% | |
| GTTCTTGTATATTTCCAGGA+AGG | + | chr3.3:58929420-58929439 | MS.gene04978:CDS | 35.0% | |
| TATGACTACATGGACTCAAA+TGG | + | chr3.3:58928236-58928255 | MS.gene04978:CDS | 35.0% | |
| TGAAAGCGAAATCCCTAATT+AGG | - | chr3.3:58926779-58926798 | None:intergenic | 35.0% | |
| TGCATTGCAGAACCATTTAT+TGG | + | chr3.3:58927687-58927706 | MS.gene04978:intron | 35.0% | |
| TGGGGACTATTTGATTCAAA+TGG | + | chr3.3:58928623-58928642 | MS.gene04978:CDS | 35.0% | |
| TGGTGTTTGGATATTGCATT+AGG | + | chr3.3:58926452-58926471 | MS.gene04978:intron | 35.0% | |
| TTACCCTTACTATGACTACA+TGG | + | chr3.3:58928226-58928245 | MS.gene04978:CDS | 35.0% | |
| TTCTGAATGATTGTAGGTCA+CGG | + | chr3.3:58929398-58929417 | MS.gene04978:intron | 35.0% | |
| TTGCTAGAAGCTCTTCATTA+GGG | - | chr3.3:58927869-58927888 | None:intergenic | 35.0% | |
| TTTAGGCAAAATTGCACTTG+CGG | - | chr3.3:58929134-58929153 | None:intergenic | 35.0% | |
| ! | ATAAATGGTTCTGCAATGCA+AGG | - | chr3.3:58927687-58927706 | None:intergenic | 35.0% |
| ! | GATTCTTTGTTTGGTGGAAT+TGG | - | chr3.3:58928293-58928312 | None:intergenic | 35.0% |
| ! | TGAAACTCATTGTGTTGCTA+AGG | + | chr3.3:58928709-58928728 | MS.gene04978:CDS | 35.0% |
| ! | TGAAGAGTGCATAATCCAAA+GGG | - | chr3.3:58928268-58928287 | None:intergenic | 35.0% |
| ! | TGAGTAATGAAGAAGTGTGT+TGG | - | chr3.3:58928324-58928343 | None:intergenic | 35.0% |
| ! | TTGAAGAGTGCATAATCCAA+AGG | - | chr3.3:58928269-58928288 | None:intergenic | 35.0% |
| !! | CGGTCACATTAGTGTTTTTA+AGG | + | chr3.3:58929086-58929105 | MS.gene04978:intron | 35.0% |
| AGTATGATGGTAGAAGGAAG+CGG | - | chr3.3:58928098-58928117 | None:intergenic | 40.0% | |
| ATTCAGCGTCTCACACATTT+GGG | + | chr3.3:58927566-58927585 | MS.gene04978:intron | 40.0% | |
| ATTGCTGTGATATTTGTGGC+TGG | - | chr3.3:58927951-58927970 | None:intergenic | 40.0% | |
| CAAATTCCACGGCTTCAAAT+TGG | + | chr3.3:58927898-58927917 | MS.gene04978:CDS | 40.0% | |
| CACGGTTCTTGTATATTTCC+AGG | + | chr3.3:58929416-58929435 | MS.gene04978:CDS | 40.0% | |
| CCAATGTTCACCCCAATAAA+TGG | - | chr3.3:58927702-58927721 | None:intergenic | 40.0% | |
| CCATTTATTGGGGTGAACAT+TGG | + | chr3.3:58927699-58927718 | MS.gene04978:CDS | 40.0% | |
| CTCAAATGGTGTAATCCCTT+TGG | + | chr3.3:58928250-58928269 | MS.gene04978:CDS | 40.0% | |
| CTCCAAAATTTACACCGAGA+TGG | - | chr3.3:58926884-58926903 | None:intergenic | 40.0% | |
| GAATTACACCAACATTCCTG+TGG | + | chr3.3:58928394-58928413 | MS.gene04978:CDS | 40.0% | |
| GACTTTCTTGAATAGCACTG+AGG | + | chr3.3:58927094-58927113 | MS.gene04978:intron | 40.0% | |
| GAGTCCATGTAGTCATAGTA+AGG | - | chr3.3:58928233-58928252 | None:intergenic | 40.0% | |
| GCATGAGCAACAACATTATC+AGG | - | chr3.3:58928836-58928855 | None:intergenic | 40.0% | |
| GCATTGTCCGAGAAAAATTG+GGG | + | chr3.3:58928605-58928624 | MS.gene04978:CDS | 40.0% | |
| GGCATTGTCCGAGAAAAATT+GGG | + | chr3.3:58928604-58928623 | MS.gene04978:CDS | 40.0% | |
| TACAAAGGGGAAAAACACGA+GGG | + | chr3.3:58926928-58926947 | MS.gene04978:intron | 40.0% | |
| TATATACGAGCTCTACAACG+AGG | + | chr3.3:58928568-58928587 | MS.gene04978:CDS | 40.0% | |
| TCGCACAATTGTGATACTTG+GGG | + | chr3.3:58926983-58927002 | MS.gene04978:intron | 40.0% | |
| TGACTTACTTGGATCTGAAG+TGG | - | chr3.3:58928939-58928958 | None:intergenic | 40.0% | |
| TGATTCATTTCCACCTTCAC+AGG | + | chr3.3:58928118-58928137 | MS.gene04978:CDS | 40.0% | |
| TGCAGTATCTACTACTGTTG+TGG | + | chr3.3:58926314-58926333 | MS.gene04978:CDS | 40.0% | |
| TTACAAAGGGGAAAAACACG+AGG | + | chr3.3:58926927-58926946 | MS.gene04978:intron | 40.0% | |
| TTGCACCCAGAAAAATGTGA+TGG | - | chr3.3:58929572-58929591 | None:intergenic | 40.0% | |
| TTGGGTTTCTCACAATGTGT+TGG | + | chr3.3:58927917-58927936 | MS.gene04978:CDS | 40.0% | |
| TTTGTGGTTATGTGCAGTCT+CGG | + | chr3.3:58929521-58929540 | MS.gene04978:intron | 40.0% | |
| ! | ACTCATTGTGTTGCTAAGGA+TGG | + | chr3.3:58928713-58928732 | MS.gene04978:CDS | 40.0% |
| ! | AGAAAAATGTGATGGTGCAG+GGG | - | chr3.3:58929564-58929583 | None:intergenic | 40.0% |
| ! | ATAGTGCTGTTAGCATAGCT+TGG | - | chr3.3:58927815-58927834 | None:intergenic | 40.0% |
| ! | CAGAAAAATGTGATGGTGCA+GGG | - | chr3.3:58929565-58929584 | None:intergenic | 40.0% |
| ! | CATGGTTTTCCCTGAAACAA+CGG | - | chr3.3:58928806-58928825 | None:intergenic | 40.0% |
| ! | CTGCACCATCACATTTTTCT+GGG | + | chr3.3:58929564-58929583 | MS.gene04978:CDS | 40.0% |
| ! | GATTGTTCTCCGTTGTTTCA+GGG | + | chr3.3:58928794-58928813 | MS.gene04978:CDS | 40.0% |
| ! | GCTTGATCGTTTTCCAGTAT+TGG | + | chr3.3:58929012-58929031 | MS.gene04978:intron | 40.0% |
| ! | GTTTTGCAATTGACAGGTTC+AGG | + | chr3.3:58928659-58928678 | MS.gene04978:CDS | 40.0% |
| ! | TCGTCAGAACTACCTTTTGA+AGG | - | chr3.3:58928440-58928459 | None:intergenic | 40.0% |
| ! | TTTTGCTACATTTGGGAGAG+TGG | - | chr3.3:58927997-58928016 | None:intergenic | 40.0% |
| !! | CACCATCTCGGTGTAAATTT+TGG | + | chr3.3:58926879-58926898 | MS.gene04978:intron | 40.0% |
| !! | GCTTACAAGCGTTTGATTTG+TGG | + | chr3.3:58929505-58929524 | MS.gene04978:intron | 40.0% |
| !! | TTTTGAAGGCCAACCAGTTT+CGG | - | chr3.3:58928426-58928445 | None:intergenic | 40.0% |
| !!! | CGCTTTCATGGGTGATTTTT+TGG | + | chr3.3:58926791-58926810 | MS.gene04978:intron | 40.0% |
| !!! | TTAGCCCCACCTTTTTTTGT+AGG | + | chr3.3:58926622-58926641 | MS.gene04978:intron | 40.0% |
| ACAAAGGGGAAAAACACGAG+GGG | + | chr3.3:58926929-58926948 | MS.gene04978:intron | 45.0% | |
| ACACAATCGCGATACTTGAG+GGG | - | chr3.3:58926598-58926617 | None:intergenic | 45.0% | |
| ACTACTGTTGTGGCTGATGA+AGG | + | chr3.3:58926324-58926343 | MS.gene04978:CDS | 45.0% | |
| ATCAAGATTCGACGCGACAA+GGG | - | chr3.3:58928054-58928073 | None:intergenic | 45.0% | |
| CACACAATCGCGATACTTGA+GGG | - | chr3.3:58926599-58926618 | None:intergenic | 45.0% | |
| CATTCAGCGTCTCACACATT+TGG | + | chr3.3:58927565-58927584 | MS.gene04978:intron | 45.0% | |
| GAAATGAAGATGGGGCAGAT+AGG | + | chr3.3:58927059-58927078 | MS.gene04978:intron | 45.0% | |
| GAGACTTCAAGGACCAATAC+TGG | - | chr3.3:58929028-58929047 | None:intergenic | 45.0% | |
| GTGTTAAAGAAGGCCTGTGA+AGG | - | chr3.3:58928134-58928153 | None:intergenic | 45.0% | |
| TCACACAATCGCGATACTTG+AGG | - | chr3.3:58926600-58926619 | None:intergenic | 45.0% | |
| TTAAAGAAGGCCTGTGAAGG+TGG | - | chr3.3:58928131-58928150 | None:intergenic | 45.0% | |
| TTACACCAACATTCCTGTGG+TGG | + | chr3.3:58928397-58928416 | MS.gene04978:CDS | 45.0% | |
| TTCAGCGTCTCACACATTTG+GGG | + | chr3.3:58927567-58927586 | MS.gene04978:intron | 45.0% | |
| ! | AGAAACCCAATTTGAAGCCG+TGG | - | chr3.3:58927907-58927926 | None:intergenic | 45.0% |
| ! | AGCAGTGCTACTACTTGAGT+AGG | - | chr3.3:58927750-58927769 | None:intergenic | 45.0% |
| ! | CCAGAAAAATGTGATGGTGC+AGG | - | chr3.3:58929566-58929585 | None:intergenic | 45.0% |
| ! | CCTGCACCATCACATTTTTC+TGG | + | chr3.3:58929563-58929582 | MS.gene04978:CDS | 45.0% |
| ! | GCAGTGCTACTACTTGAGTA+GGG | - | chr3.3:58927749-58927768 | None:intergenic | 45.0% |
| ! | GCATTGGCAAGTGTTGCATT+AGG | - | chr3.3:58928464-58928483 | None:intergenic | 45.0% |
| ! | GGATTGTTCTCCGTTGTTTC+AGG | + | chr3.3:58928793-58928812 | MS.gene04978:CDS | 45.0% |
| ! | GGGCATTGTCCGAGAAAAAT+TGG | + | chr3.3:58928603-58928622 | MS.gene04978:CDS | 45.0% |
| !! | AGCAATTTGCGTTGGTTCTG+AGG | + | chr3.3:58927965-58927984 | MS.gene04978:CDS | 45.0% |
| !! | GAAACTGGTTGGCCTTCAAA+AGG | + | chr3.3:58928425-58928444 | MS.gene04978:CDS | 45.0% |
| !! | GGAGAACAATCCACTTTTCC+AGG | - | chr3.3:58928785-58928804 | None:intergenic | 45.0% |
| !!! | GTGCACGTTTTGAGACTTCA+AGG | - | chr3.3:58929039-58929058 | None:intergenic | 45.0% |
| AATTGCACTTGCGGTCCTTC+AGG | - | chr3.3:58929125-58929144 | None:intergenic | 50.0% | |
| ACAACGAGGACAAACAGCCA+GGG | + | chr3.3:58928582-58928601 | MS.gene04978:CDS | 50.0% | |
| ATTCCGGCCTGCAACATCTT+CGG | - | chr3.3:58928746-58928765 | None:intergenic | 50.0% | |
| GATCAAGATTCGACGCGACA+AGG | - | chr3.3:58928055-58928074 | None:intergenic | 50.0% | |
| GCTACTACTTGAGTAGGGTG+AGG | - | chr3.3:58927744-58927763 | None:intergenic | 50.0% | |
| GGATACATTGCCGTACCTGA+AGG | + | chr3.3:58929107-58929126 | MS.gene04978:intron | 50.0% | |
| GTGAGGCATGTCTGAGAGAT+CGG | - | chr3.3:58927727-58927746 | None:intergenic | 50.0% | |
| GTTGCAGGCCGGAATAGATT+GGG | + | chr3.3:58928751-58928770 | MS.gene04978:CDS | 50.0% | |
| TACAACGAGGACAAACAGCC+AGG | + | chr3.3:58928581-58928600 | MS.gene04978:CDS | 50.0% | |
| TCCACAGGCCCAATCTATTC+CGG | - | chr3.3:58928762-58928781 | None:intergenic | 50.0% | |
| TGCTGATCCGAAGATGTTGC+AGG | + | chr3.3:58928736-58928755 | MS.gene04978:CDS | 50.0% | |
| TGTTGCAGGCCGGAATAGAT+TGG | + | chr3.3:58928750-58928769 | MS.gene04978:CDS | 50.0% | |
| ! | ACACTAATTCCAGGGCGCTT+TGG | - | chr3.3:58928539-58928558 | None:intergenic | 50.0% |
| ! | GACAGGTTCAGGTGCAGTTT+TGG | + | chr3.3:58928670-58928689 | MS.gene04978:CDS | 50.0% |
| ! | TTTTTCTCGGACAATGCCCC+TGG | - | chr3.3:58928602-58928621 | None:intergenic | 50.0% |
| !! | ATCCACTTTTCCAGGTCCAC+AGG | - | chr3.3:58928777-58928796 | None:intergenic | 50.0% |
| ATAGATTGGGCCTGTGGACC+TGG | + | chr3.3:58928764-58928783 | MS.gene04978:CDS | 55.0% | |
| CAACGAGGACAAACAGCCAG+GGG | + | chr3.3:58928583-58928602 | MS.gene04978:CDS | 55.0% | |
| CACTTGCGGTCCTTCAGGTA+CGG | - | chr3.3:58929120-58929139 | None:intergenic | 55.0% | |
| GATCCGAAGATGTTGCAGGC+CGG | + | chr3.3:58928740-58928759 | MS.gene04978:CDS | 55.0% | |
| GGTCACCACCACAGGAATGT+TGG | - | chr3.3:58928405-58928424 | None:intergenic | 55.0% | |
| ! | AAATGTGATGGTGCAGGGGC+AGG | - | chr3.3:58929560-58929579 | None:intergenic | 55.0% |
| ! | AATGTGATGGTGCAGGGGCA+GGG | - | chr3.3:58929559-58929578 | None:intergenic | 55.0% |
| ! | TGGTGGTGACCGAAACTGGT+TGG | + | chr3.3:58928414-58928433 | MS.gene04978:CDS | 55.0% |
| CCAGTTTCGGTCACCACCAC+AGG | - | chr3.3:58928413-58928432 | None:intergenic | 60.0% | |
| GCCGGAATAGATTGGGCCTG+TGG | + | chr3.3:58928758-58928777 | MS.gene04978:CDS | 60.0% | |
| GGCCTGTGGACCTGGAAAAG+TGG | + | chr3.3:58928772-58928791 | MS.gene04978:CDS | 60.0% | |
| ! | ACTGGAACTCCAAAGCGCCC+TGG | + | chr3.3:58928527-58928546 | MS.gene04978:CDS | 60.0% |
| ! | ATGTGATGGTGCAGGGGCAG+GGG | - | chr3.3:58929558-58929577 | None:intergenic | 60.0% |
| ! | CCTGTGGTGGTGACCGAAAC+TGG | + | chr3.3:58928410-58928429 | MS.gene04978:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 58926282 | 58929670 | 58926282 | ID=MS.gene04978 |
| chr3.3 | mRNA | 58926282 | 58929670 | 58926282 | ID=MS.gene04978.t1;Parent=MS.gene04978 |
| chr3.3 | exon | 58926282 | 58926345 | 58926282 | ID=MS.gene04978.t1.exon1;Parent=MS.gene04978.t1 |
| chr3.3 | CDS | 58926282 | 58926345 | 58926282 | ID=cds.MS.gene04978.t1;Parent=MS.gene04978.t1 |
| chr3.3 | exon | 58927697 | 58928950 | 58927697 | ID=MS.gene04978.t1.exon2;Parent=MS.gene04978.t1 |
| chr3.3 | CDS | 58927697 | 58928950 | 58927697 | ID=cds.MS.gene04978.t1;Parent=MS.gene04978.t1 |
| chr3.3 | exon | 58929414 | 58929441 | 58929414 | ID=MS.gene04978.t1.exon3;Parent=MS.gene04978.t1 |
| chr3.3 | CDS | 58929414 | 58929441 | 58929414 | ID=cds.MS.gene04978.t1;Parent=MS.gene04978.t1 |
| chr3.3 | exon | 58929538 | 58929670 | 58929538 | ID=MS.gene04978.t1.exon4;Parent=MS.gene04978.t1 |
| chr3.3 | CDS | 58929538 | 58929670 | 58929538 | ID=cds.MS.gene04978.t1;Parent=MS.gene04978.t1 |
| Gene Sequence |
| Protein sequence |
