Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050966.t1 | XP_003626129.2 | 86.4 | 471 | 60 | 2 | 1 | 468 | 1 | 470 | 6.90E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050966.t1 | Q0JNI9 | 34.5 | 223 | 128 | 6 | 246 | 468 | 212 | 416 | 3.6e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050966.t1 | G7KVK4 | 86.4 | 471 | 60 | 2 | 1 | 468 | 1 | 470 | 5.0e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050966.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050803 | MS.gene050966 | 0.985981 | 2.74E-165 | -1.69E-46 |
| MS.gene050966 | MS.gene072604 | 0.834778 | 2.46E-56 | -1.69E-46 |
| MS.gene050966 | MS.gene072605 | 0.843815 | 1.11E-58 | -1.69E-46 |
| MS.gene050966 | MS.gene22786 | 0.846475 | 2.12E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050966.t1 | MTR_7g111320 | 91.507 | 471 | 36 | 2 | 1 | 468 | 1 | 470 | 0.0 | 862 |
| MS.gene050966.t1 | MTR_1g084980 | 48.757 | 523 | 214 | 12 | 2 | 480 | 1 | 513 | 3.98e-143 | 422 |
| MS.gene050966.t1 | MTR_1g084980 | 49.216 | 510 | 206 | 11 | 2 | 468 | 1 | 500 | 4.01e-141 | 422 |
| MS.gene050966.t1 | MTR_1g069155 | 50.000 | 98 | 47 | 1 | 371 | 468 | 260 | 355 | 1.58e-18 | 88.6 |
| MS.gene050966.t1 | MTR_7g099540 | 46.667 | 105 | 47 | 2 | 370 | 468 | 189 | 290 | 1.87e-17 | 85.1 |
| MS.gene050966.t1 | MTR_7g099540 | 46.667 | 105 | 47 | 2 | 370 | 468 | 189 | 290 | 1.97e-17 | 85.1 |
| MS.gene050966.t1 | MTR_3g449770 | 56.944 | 72 | 29 | 1 | 397 | 468 | 278 | 347 | 2.48e-14 | 75.5 |
| MS.gene050966.t1 | MTR_7g110810 | 46.316 | 95 | 44 | 3 | 377 | 469 | 152 | 241 | 4.27e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT1G09530 | 28.692 | 474 | 232 | 13 | 2 | 468 | 1 | 375 | 2.97e-28 | 118 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 138 | 245 | 2.67e-13 | 72.0 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 138 | 245 | 2.67e-13 | 72.0 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 138 | 245 | 2.67e-13 | 72.0 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 209 | 316 | 4.59e-13 | 71.6 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 209 | 316 | 4.59e-13 | 71.6 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 209 | 316 | 4.59e-13 | 71.6 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 209 | 316 | 4.59e-13 | 71.6 |
| MS.gene050966.t1 | AT2G20180 | 40.171 | 117 | 57 | 3 | 356 | 468 | 209 | 316 | 9.37e-13 | 69.7 |
| MS.gene050966.t1 | AT4G28815 | 55.102 | 49 | 22 | 0 | 420 | 468 | 58 | 106 | 5.90e-12 | 65.9 |
| MS.gene050966.t1 | AT2G46970 | 44.231 | 104 | 52 | 3 | 368 | 468 | 130 | 230 | 7.07e-12 | 67.4 |
| MS.gene050966.t1 | AT2G46970 | 44.231 | 104 | 52 | 3 | 368 | 468 | 161 | 261 | 7.42e-12 | 67.4 |
| MS.gene050966.t1 | AT2G46970 | 44.231 | 104 | 52 | 3 | 368 | 468 | 139 | 239 | 9.05e-12 | 67.0 |
| MS.gene050966.t1 | AT4G28815 | 55.102 | 49 | 22 | 0 | 420 | 468 | 134 | 182 | 1.75e-11 | 65.5 |
Find 0 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTGATCAATAAATATT+GGG | - | 50607:8298-8317 | MS.gene050966:intron | 15.0% |
| !! | TAAAAGTGATCAATAAATAT+TGG | - | 50607:8297-8316 | MS.gene050966:intron | 15.0% |
| !!! | AATTTCTTCTAATATTTTGT+GGG | - | 50607:8197-8216 | MS.gene050966:CDS | 15.0% |
| !!! | AGAATCTTTTAAAAAATCTA+CGG | - | 50607:7594-7613 | MS.gene050966:CDS | 15.0% |
| !!! | ATTTATTGATCACTTTTATT+AGG | + | 50607:8295-8314 | MS.gene050966:intergenic | 15.0% |
| !!! | TTATTTCTACTTTTCTTAAA+AGG | + | 50607:7981-8000 | MS.gene050966:intergenic | 15.0% |
| !!! | TTTATTGATCACTTTTATTA+GGG | + | 50607:8294-8313 | MS.gene050966:intergenic | 15.0% |
| !! | AAGCAAAGAAAATTTATTTG+TGG | + | 50607:6948-6967 | MS.gene050966:intergenic | 20.0% |
| !! | GTTTGAATGAAATTATTACA+AGG | - | 50607:6783-6802 | MS.gene050966:CDS | 20.0% |
| !!! | AAATCTAATTGATTCAAATG+AGG | + | 50607:7128-7147 | MS.gene050966:intergenic | 20.0% |
| !!! | AATCTAATTGATTCAAATGA+GGG | + | 50607:7127-7146 | MS.gene050966:intergenic | 20.0% |
| !!! | CAATTTTTTTGTTAACTTGT+AGG | - | 50607:7819-7838 | MS.gene050966:CDS | 20.0% |
| !!! | GAATTTCTTCTAATATTTTG+TGG | - | 50607:8196-8215 | MS.gene050966:CDS | 20.0% |
| !!! | GGTTTTGGTTTTAATAAAAA+CGG | - | 50607:8235-8254 | MS.gene050966:CDS | 20.0% |
| ! | AAAATGGGTGAAATTCATTA+CGG | + | 50607:7242-7261 | MS.gene050966:intergenic | 25.0% |
| ! | AAGTTTGAGGATTTAGATAA+CGG | - | 50607:6761-6780 | MS.gene050966:CDS | 25.0% |
| ! | AATGAAACAAATACAAGGAT+AGG | - | 50607:6737-6756 | MS.gene050966:intron | 25.0% |
| ! | ACACAATTTCTAACACTAAT+GGG | + | 50607:6503-6522 | MS.gene050966:intergenic | 25.0% |
| ! | ATGCTAATGAAACAAATACA+AGG | - | 50607:6732-6751 | MS.gene050966:intron | 25.0% |
| ! | CACAAGATAATTCAACAAAT+AGG | + | 50607:7766-7785 | MS.gene050966:intergenic | 25.0% |
| ! | TACACAATTTCTAACACTAA+TGG | + | 50607:6504-6523 | MS.gene050966:intergenic | 25.0% |
| ! | TCAATTAGATTTAGAGAATC+AGG | - | 50607:7136-7155 | MS.gene050966:intron | 25.0% |
| ! | TTAGGTGTGAATAATACAAA+AGG | - | 50607:7160-7179 | MS.gene050966:CDS | 25.0% |
| !! | AAATTTGAAGCGAAAAAATC+TGG | - | 50607:7687-7706 | MS.gene050966:CDS | 25.0% |
| !! | ATCAATAAATATTGGGCTTT+TGG | - | 50607:8305-8324 | MS.gene050966:intron | 25.0% |
| !! | TCAATAAATATTGGGCTTTT+GGG | - | 50607:8306-8325 | MS.gene050966:intron | 25.0% |
| !! | TCATCAAAAGTTGATTTAAG+TGG | - | 50607:7382-7401 | MS.gene050966:CDS | 25.0% |
| !!! | GATTTTGAAGATGAATCAAT+TGG | - | 50607:7841-7860 | MS.gene050966:CDS | 25.0% |
| AAAGCTAATCTTCAGAACAT+TGG | - | 50607:7283-7302 | MS.gene050966:CDS | 30.0% | |
| AACTGAAACAAATCGTTTCT+GGG | + | 50607:6602-6621 | MS.gene050966:intergenic | 30.0% | |
| AAGGGTCATGATAAATATTC+AGG | - | 50607:6704-6723 | MS.gene050966:intron | 30.0% | |
| AGATTTAGAGAATCAGGTTT+AGG | - | 50607:7142-7161 | MS.gene050966:intron | 30.0% | |
| ATATGAGAGATTTCTTCACA+AGG | + | 50607:7205-7224 | MS.gene050966:intergenic | 30.0% | |
| ATTGGAAGTTTGATCAACTT+TGG | + | 50607:7542-7561 | MS.gene050966:intergenic | 30.0% | |
| GAACCTGAAGAAAGAAAAAA+AGG | + | 50607:8158-8177 | MS.gene050966:intergenic | 30.0% | |
| TTTAGTGACTCTCATAAACA+AGG | - | 50607:6995-7014 | MS.gene050966:CDS | 30.0% | |
| TTTGTGTAGAAACATAGTGT+AGG | - | 50607:8341-8360 | MS.gene050966:intron | 30.0% | |
| ! | GTGTTTTTCTCAAGAGATTT+CGG | + | 50607:7484-7503 | MS.gene050966:intergenic | 30.0% |
| !! | AGTTGAAGATTTTGATACCT+CGG | - | 50607:7045-7064 | MS.gene050966:intron | 30.0% |
| !! | CAACTTTTTCTTTAGACATG+TGG | + | 50607:6419-6438 | MS.gene050966:intergenic | 30.0% |
| !! | CTTTTCTTAAAAGGCACAAA+TGG | + | 50607:7972-7991 | MS.gene050966:intergenic | 30.0% |
| !!! | CTACAATCAATTGTTGGTTT+TGG | - | 50607:8220-8239 | MS.gene050966:CDS | 30.0% |
| !!! | TGACCTTTTTTTCTTTCTTC+AGG | - | 50607:8152-8171 | MS.gene050966:CDS | 30.0% |
| AAGTGCACAATCTATCTGAA+AGG | - | 50607:7923-7942 | MS.gene050966:CDS | 35.0% | |
| AATAGTCATAGTGATGGCAA+AGG | + | 50607:8433-8452 | MS.gene050966:intergenic | 35.0% | |
| ACTTACACAGATGATTGATC+TGG | + | 50607:6471-6490 | MS.gene050966:intergenic | 35.0% | |
| AGTCCATCTCATACTCTTAA+GGG | - | 50607:6686-6705 | MS.gene050966:intron | 35.0% | |
| AGTGCACAATCTATCTGAAA+GGG | - | 50607:7924-7943 | MS.gene050966:CDS | 35.0% | |
| ATAGTCATAGTGATGGCAAA+GGG | + | 50607:8432-8451 | MS.gene050966:intergenic | 35.0% | |
| ATGACTATTCTGCTCATTAG+TGG | - | 50607:8444-8463 | MS.gene050966:CDS | 35.0% | |
| ATTGACCATGCACTAAAATC+TGG | + | 50607:6640-6659 | MS.gene050966:intergenic | 35.0% | |
| CAAACTTCCAATCAAGTTCT+TGG | - | 50607:7550-7569 | MS.gene050966:CDS | 35.0% | |
| CAACTGAAACAAATCGTTTC+TGG | + | 50607:6603-6622 | MS.gene050966:intergenic | 35.0% | |
| CACTATTTACATCGTAGTTC+TGG | - | 50607:6878-6897 | MS.gene050966:intron | 35.0% | |
| CGACGGCATATTTAATTGAT+TGG | + | 50607:7086-7105 | MS.gene050966:intergenic | 35.0% | |
| CTTACACAGATGATTGATCT+GGG | + | 50607:6470-6489 | MS.gene050966:intergenic | 35.0% | |
| GGTGTTAAAAGAACTGATCA+TGG | - | 50607:7862-7881 | MS.gene050966:CDS | 35.0% | |
| GGTTTCTTACATGAACTATC+TGG | - | 50607:6899-6918 | MS.gene050966:intron | 35.0% | |
| GTTGAATTATCTTGTGAGTG+TGG | - | 50607:7770-7789 | MS.gene050966:CDS | 35.0% | |
| TACAAGGATAGGAAAGTTTG+AGG | - | 50607:6748-6767 | MS.gene050966:CDS | 35.0% | |
| TTACACAGATGATTGATCTG+GGG | + | 50607:6469-6488 | MS.gene050966:intergenic | 35.0% | |
| TTCAGATAGATTGTGCACTT+CGG | + | 50607:7923-7942 | MS.gene050966:intergenic | 35.0% | |
| TTGCACGGTTATAAATAGAG+AGG | - | 50607:8400-8419 | MS.gene050966:intron | 35.0% | |
| ! | AAACAAGGTATCCTTTCCAA+GGG | - | 50607:7010-7029 | MS.gene050966:CDS | 35.0% |
| ! | ACGATTTGTTTCAGTTGGTT+TGG | - | 50607:6606-6625 | MS.gene050966:intron | 35.0% |
| ! | CAATGTATGGCTGAACTTTT+TGG | + | 50607:7415-7434 | MS.gene050966:intergenic | 35.0% |
| ! | CAGAAACGATTTGTTTCAGT+TGG | - | 50607:6601-6620 | MS.gene050966:intron | 35.0% |
| ! | TAAACAAGGTATCCTTTCCA+AGG | - | 50607:7009-7028 | MS.gene050966:CDS | 35.0% |
| ! | TCATCTTGACTTGAAGAAAC+AGG | + | 50607:6809-6828 | MS.gene050966:intergenic | 35.0% |
| !! | AATGACCAGATTTTAGTGCA+TGG | - | 50607:6632-6651 | MS.gene050966:intron | 35.0% |
| !! | GTTGAAGATTTTGATACCTC+GGG | - | 50607:7046-7065 | MS.gene050966:intron | 35.0% |
| !! | TCAACTTTTGATGATTCGCA+AGG | + | 50607:7376-7395 | MS.gene050966:intergenic | 35.0% |
| !! | TGATCCATTTGATGATGCTT+AGG | - | 50607:8268-8287 | MS.gene050966:CDS | 35.0% |
| AAAAGAACTGATCATGGACG+AGG | - | 50607:7868-7887 | MS.gene050966:CDS | 40.0% | |
| AACAAAGATGCAGCTGTGAT+AGG | - | 50607:7343-7362 | MS.gene050966:CDS | 40.0% | |
| AACTGCAATTGAAGAACCCT+TGG | + | 50607:7029-7048 | MS.gene050966:intergenic | 40.0% | |
| ACTCATACCGAATTGCAACA+AGG | - | 50607:8128-8147 | MS.gene050966:CDS | 40.0% | |
| ACTCTCACCAAGAACTTGAT+TGG | + | 50607:7560-7579 | MS.gene050966:intergenic | 40.0% | |
| AGGTCAACCTTGTTGCAATT+CGG | + | 50607:8138-8157 | MS.gene050966:intergenic | 40.0% | |
| ATTTATAACCGTGCAACCCT+AGG | + | 50607:8396-8415 | MS.gene050966:intergenic | 40.0% | |
| CAAAGGTTTCAAATCAACCC+TGG | + | 50607:7458-7477 | MS.gene050966:intergenic | 40.0% | |
| CAATTGAAGAACCCTTGGAA+AGG | + | 50607:7024-7043 | MS.gene050966:intergenic | 40.0% | |
| CATACATTGTCATCAGTCAG+TGG | - | 50607:7426-7445 | MS.gene050966:CDS | 40.0% | |
| CGGTTATAAATAGAGAGGCT+AGG | - | 50607:8405-8424 | MS.gene050966:intron | 40.0% | |
| GAGCAGAATAGTCATAGTGA+TGG | + | 50607:8439-8458 | MS.gene050966:intergenic | 40.0% | |
| GAGTCCATCTCATACTCTTA+AGG | - | 50607:6685-6704 | MS.gene050966:intron | 40.0% | |
| GATACATCTTCTTTGCAAGC+AGG | + | 50607:7520-7539 | MS.gene050966:intergenic | 40.0% | |
| GCGAAAAAATCTGGACTATG+AGG | - | 50607:7696-7715 | MS.gene050966:CDS | 40.0% | |
| GGTGAAATTCATTACGGTTG+AGG | + | 50607:7236-7255 | MS.gene050966:intergenic | 40.0% | |
| TCATTACGGTTGAGGAAGAT+GGG | + | 50607:7228-7247 | MS.gene050966:intergenic | 40.0% | |
| TCCATTGCACAATTCAACCA+AGG | + | 50607:6851-6870 | MS.gene050966:intergenic | 40.0% | |
| TGACATTGATGCAACAACGA+CGG | + | 50607:7103-7122 | MS.gene050966:intergenic | 40.0% | |
| TTCATTACGGTTGAGGAAGA+TGG | + | 50607:7229-7248 | MS.gene050966:intergenic | 40.0% | |
| ! | CAAACTTAGGGTTTTCGATG+GGG | + | 50607:8474-8493 | MS.gene050966:intergenic | 40.0% |
| ! | CACTGACTGATGACAATGTA+TGG | + | 50607:7428-7447 | MS.gene050966:intergenic | 40.0% |
| ! | CCAAACTTAGGGTTTTCGAT+GGG | + | 50607:8475-8494 | MS.gene050966:intergenic | 40.0% |
| ! | TCCAAACTTAGGGTTTTCGA+TGG | + | 50607:8476-8495 | MS.gene050966:intergenic | 40.0% |
| ! | TGACCCTTAAGAGTATGAGA+TGG | + | 50607:6692-6711 | MS.gene050966:intergenic | 40.0% |
| ! | TGTGGGCTACAATCAATTGT+TGG | - | 50607:8214-8233 | MS.gene050966:CDS | 40.0% |
| !! | ATTTGATGACGATGATGCCT+TGG | - | 50607:6831-6850 | MS.gene050966:intron | 40.0% |
| !! | CAGGGTTGATTTGAAACCTT+TGG | - | 50607:7456-7475 | MS.gene050966:CDS | 40.0% |
| !!! | TGGACTCGTTTTAGCTCTAT+TGG | + | 50607:6672-6691 | MS.gene050966:intergenic | 40.0% |
| AGGGCCTAAGCATCATCAAA+TGG | + | 50607:8275-8294 | MS.gene050966:intergenic | 45.0% | |
| ATAGTGTAGGCCCAAACACT+AGG | - | 50607:8354-8373 | MS.gene050966:intron | 45.0% | |
| ATGTGGCATAACTCATGCAG+AGG | + | 50607:6402-6421 | MS.gene050966:intergenic | 45.0% | |
| CCCATCGAAAACCCTAAGTT+TGG | - | 50607:8472-8491 | MS.gene050966:CDS | 45.0% | |
| GAAGAGACAGGATCAATGAG+AGG | - | 50607:8088-8107 | MS.gene050966:CDS | 45.0% | |
| GCCTTGGTTGAATTGTGCAA+TGG | - | 50607:6847-6866 | MS.gene050966:intron | 45.0% | |
| GGCAGCAAAGTCATTTGTAG+TGG | + | 50607:6927-6946 | MS.gene050966:intergenic | 45.0% | |
| GGTCTGCATTGAATCACACA+AGG | + | 50607:6581-6600 | MS.gene050966:intergenic | 45.0% | |
| GGTTTCAAATCAACCCTGGA+TGG | + | 50607:7454-7473 | MS.gene050966:intergenic | 45.0% | |
| TCAAGAGATTTCGGCTCCAA+AGG | + | 50607:7475-7494 | MS.gene050966:intergenic | 45.0% | |
| TCATCAAGACCAGAACGTGT+GGG | - | 50607:7313-7332 | MS.gene050966:CDS | 45.0% | |
| TCATGCAGATACGAAGAGAC+AGG | - | 50607:8076-8095 | MS.gene050966:CDS | 45.0% | |
| TCCTCTGTTTGCTCTGACAA+TGG | - | 50607:7634-7653 | MS.gene050966:CDS | 45.0% | |
| TGGACTATGAGGATTCTGAG+TGG | - | 50607:7707-7726 | MS.gene050966:CDS | 45.0% | |
| TTCATCAAGACCAGAACGTG+TGG | - | 50607:7312-7331 | MS.gene050966:CDS | 45.0% | |
| TTTCTTCACAAGGTGCATGC+TGG | + | 50607:7195-7214 | MS.gene050966:intergenic | 45.0% | |
| ! | AGCCGCAGGTTTTGCAAAAT+GGG | + | 50607:7257-7276 | MS.gene050966:intergenic | 45.0% |
| ! | CACCCATTTTGCAAAACCTG+CGG | - | 50607:7252-7271 | MS.gene050966:CDS | 45.0% |
| ! | TAGCCGCAGGTTTTGCAAAA+TGG | + | 50607:7258-7277 | MS.gene050966:intergenic | 45.0% |
| ! | TTAGCTTTCACAATAGCCGC+AGG | + | 50607:7271-7290 | MS.gene050966:intergenic | 45.0% |
| CCAAACACTAGGCCCATGAT+GGG | - | 50607:8365-8384 | MS.gene050966:intron | 50.0% | |
| CCATCATGGGCCTAGTGTTT+GGG | + | 50607:8367-8386 | MS.gene050966:intergenic | 50.0% | |
| CTTGGTGAGAGTCGCAGAAA+AGG | - | 50607:7568-7587 | MS.gene050966:CDS | 50.0% | |
| GCCATTGTCAGAGCAAACAG+AGG | + | 50607:7638-7657 | MS.gene050966:intergenic | 50.0% | |
| TTCTTTGCTCCCACACGTTC+TGG | + | 50607:7325-7344 | MS.gene050966:intergenic | 50.0% | |
| ! | GATCATGGACGAGGCGTTAT+GGG | - | 50607:7877-7896 | MS.gene050966:CDS | 50.0% |
| ! | TGATCATGGACGAGGCGTTA+TGG | - | 50607:7876-7895 | MS.gene050966:CDS | 50.0% |
| !!! | GGTGCTAGTTTTTAGTCCCG+AGG | + | 50607:7065-7084 | MS.gene050966:intergenic | 50.0% |
| ATCAGTCAGTGGAGCCATCC+AGG | - | 50607:7437-7456 | MS.gene050966:CDS | 55.0% | |
| CCCAAACACTAGGCCCATGA+TGG | - | 50607:8364-8383 | MS.gene050966:intron | 55.0% | |
| CCCATCATGGGCCTAGTGTT+TGG | + | 50607:8368-8387 | MS.gene050966:intergenic | 55.0% | |
| TCAGTCAGTGGAGCCATCCA+GGG | - | 50607:7438-7457 | MS.gene050966:CDS | 55.0% | |
| ! | AACACTAGGCCCATGATGGG+TGG | - | 50607:8368-8387 | MS.gene050966:intron | 55.0% |
| ACCCTAGGCACCACCCATCA+TGG | + | 50607:8381-8400 | MS.gene050966:intergenic | 60.0% | |
| CCCTAGGCACCACCCATCAT+GGG | + | 50607:8380-8399 | MS.gene050966:intergenic | 60.0% | |
| !! | CCCATGATGGGTGGTGCCTA+GGG | - | 50607:8377-8396 | MS.gene050966:intron | 60.0% |
| GGGTGGTGCCTAGGGTTGCA+CGG | - | 50607:8385-8404 | MS.gene050966:intron | 65.0% | |
| !! | GCCCATGATGGGTGGTGCCT+AGG | - | 50607:8376-8395 | MS.gene050966:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50607 | gene | 6393 | 8499 | 6393 | ID=MS.gene050966 |
| 50607 | mRNA | 6393 | 8499 | 6393 | ID=MS.gene050966.t1;Parent=MS.gene050966 |
| 50607 | exon | 8408 | 8499 | 8408 | ID=MS.gene050966.t1.exon1;Parent=MS.gene050966.t1 |
| 50607 | CDS | 8408 | 8499 | 8408 | ID=cds.MS.gene050966.t1;Parent=MS.gene050966.t1 |
| 50607 | exon | 7154 | 8294 | 7154 | ID=MS.gene050966.t1.exon2;Parent=MS.gene050966.t1 |
| 50607 | CDS | 7154 | 8294 | 7154 | ID=cds.MS.gene050966.t1;Parent=MS.gene050966.t1 |
| 50607 | exon | 6947 | 7051 | 6947 | ID=MS.gene050966.t1.exon3;Parent=MS.gene050966.t1 |
| 50607 | CDS | 6947 | 7051 | 6947 | ID=cds.MS.gene050966.t1;Parent=MS.gene050966.t1 |
| 50607 | exon | 6743 | 6808 | 6743 | ID=MS.gene050966.t1.exon4;Parent=MS.gene050966.t1 |
| 50607 | CDS | 6743 | 6808 | 6743 | ID=cds.MS.gene050966.t1;Parent=MS.gene050966.t1 |
| 50607 | exon | 6393 | 6428 | 6393 | ID=MS.gene050966.t1.exon5;Parent=MS.gene050966.t1 |
| 50607 | CDS | 6393 | 6428 | 6393 | ID=cds.MS.gene050966.t1;Parent=MS.gene050966.t1 |
| Gene Sequence |
| Protein sequence |
