Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051000.t1 | XP_003627485.1 | 97 | 537 | 14 | 1 | 1 | 535 | 1 | 537 | 8.30E-308 | 1065.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051000.t1 | Q9UUH0 | 30.3 | 333 | 204 | 11 | 53 | 376 | 46 | 359 | 1.9e-34 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051000.t1 | G7L9Y4 | 97.0 | 537 | 14 | 1 | 1 | 535 | 1 | 537 | 6.0e-308 | 1065.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055806 | MS.gene051000 | PPI |
| MS.gene043433 | MS.gene051000 | PPI |
| MS.gene31466 | MS.gene051000 | PPI |
| MS.gene028901 | MS.gene051000 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051000.t1 | MTR_8g023620 | 97.020 | 537 | 14 | 1 | 1 | 535 | 1 | 537 | 0.0 | 1080 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051000.t1 | AT1G53710 | 54.766 | 535 | 229 | 6 | 3 | 535 | 4 | 527 | 0.0 | 628 |
| MS.gene051000.t1 | AT1G53710 | 55.629 | 453 | 191 | 5 | 3 | 453 | 4 | 448 | 0.0 | 540 |
Find 101 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCTCTTCACTTGTTCA+TGG | 0.189403 | 8.3:+68541749 | MS.gene051000:CDS |
| AATCGCTTAAAACGTATATT+TGG | 0.200628 | 8.3:+68543740 | MS.gene051000:CDS |
| TTGTTCATGGCCTCATTTAA+TGG | 0.204522 | 8.3:+68541762 | MS.gene051000:CDS |
| CTGGCATCAGTGTTGGAATT+TGG | 0.239549 | 8.3:+68546144 | MS.gene051000:CDS |
| TGTGTCAACAAAGGCTCTTC+TGG | 0.253975 | 8.3:-68545743 | None:intergenic |
| GGCATCCTCATCCTTCTCTT+TGG | 0.259593 | 8.3:-68546215 | None:intergenic |
| TACGTTCTTACCTCCTTTAT+AGG | 0.261554 | 8.3:-68545564 | None:intergenic |
| ATGGTGAAATGTTCTCTTAC+TGG | 0.281529 | 8.3:+68541722 | MS.gene051000:CDS |
| TTTCTCTGTGAATATGGATA+TGG | 0.285848 | 8.3:+68546856 | MS.gene051000:CDS |
| CTTTATTGCTATGTCTCATA+TGG | 0.290317 | 8.3:+68541683 | MS.gene051000:CDS |
| AGCAGATTTCTCTGTGAATA+TGG | 0.297086 | 8.3:+68546850 | MS.gene051000:CDS |
| AACTTTACCTGATTGATAAT+CGG | 0.302842 | 8.3:-68544969 | None:intergenic |
| ATAACCAATATCATGGTTTC+CGG | 0.326332 | 8.3:-68543810 | None:intergenic |
| TACTCTTCATCTGATAAATA+AGG | 0.335356 | 8.3:-68542775 | None:intergenic |
| ATCTAAATCCGGGCCTATAA+AGG | 0.336684 | 8.3:+68545551 | MS.gene051000:CDS |
| GAAGTGTGCGTAGTAATCTT+TGG | 0.337715 | 8.3:-68546952 | None:intergenic |
| TTACATGATGTTGCTATTCA+AGG | 0.338720 | 8.3:+68547012 | MS.gene051000:CDS |
| ATTCCCGGAAACCATGATAT+TGG | 0.342682 | 8.3:+68543806 | MS.gene051000:CDS |
| TTGCATCCACGTAGGTTATC+AGG | 0.352800 | 8.3:+68544377 | MS.gene051000:intron |
| CCCTCCTAGCCCTCTTACTC+TGG | 0.369428 | 8.3:+68546101 | MS.gene051000:CDS |
| GTCGATTCACAAACTCTTGA+TGG | 0.370887 | 8.3:+68544466 | MS.gene051000:CDS |
| AGGCGCTACGAGGAAACATT+TGG | 0.375310 | 8.3:+68544397 | MS.gene051000:CDS |
| CAACAAGTAACACAAGTTTC+TGG | 0.381036 | 8.3:+68546125 | MS.gene051000:CDS |
| AGCATCTGACTTCTCAAACT+TGG | 0.384651 | 8.3:+68544750 | MS.gene051000:CDS |
| AAGTTAAAAGTTGTTTGAAA+TGG | 0.385757 | 8.3:-68546171 | None:intergenic |
| ACTTTACCTGATTGATAATC+GGG | 0.390104 | 8.3:-68544968 | None:intergenic |
| ATATAAATGTGAAATTGCTT+TGG | 0.391993 | 8.3:-68545779 | None:intergenic |
| ATCACTCATCAATCTAAATC+CGG | 0.406320 | 8.3:+68545540 | MS.gene051000:CDS |
| TACTTCCCCGATTATCAATC+AGG | 0.417367 | 8.3:+68544962 | MS.gene051000:CDS |
| GACTTTCATAACCAATATCA+TGG | 0.421404 | 8.3:-68543817 | None:intergenic |
| TCTTCTGGAATGGAAGCATT+TGG | 0.422036 | 8.3:-68545728 | None:intergenic |
| GTATCATCCGATCGATATAA+AGG | 0.423303 | 8.3:-68544921 | None:intergenic |
| CAGAAACTTGTGTTACTTGT+TGG | 0.428628 | 8.3:-68546124 | None:intergenic |
| AAGCCAGTTTACTATATTCC+CGG | 0.431775 | 8.3:+68543791 | MS.gene051000:CDS |
| TTTCCGGGAATATAGTAAAC+TGG | 0.432165 | 8.3:-68543794 | None:intergenic |
| TGGGCACTAACCCTTCTCTA+TGG | 0.435859 | 8.3:+68541703 | MS.gene051000:CDS |
| GCATCTGACTTCTCAAACTT+GGG | 0.436097 | 8.3:+68544751 | MS.gene051000:CDS |
| TGACATCAGGCTTGAAAGGC+AGG | 0.445057 | 8.3:-68542720 | None:intergenic |
| TGATGTTGCTATTCAAGGAT+TGG | 0.450159 | 8.3:+68547017 | MS.gene051000:CDS |
| TTGGCCAGAGTAAGAGGGCT+AGG | 0.467040 | 8.3:-68546105 | None:intergenic |
| AATTCAAATGAAAGAAGCTT+AGG | 0.471188 | 8.3:+68546316 | MS.gene051000:CDS |
| TACTTGTTGGCCAGAGTAAG+AGG | 0.471931 | 8.3:-68546111 | None:intergenic |
| AGCAATTTCACATTTATATG+TGG | 0.472099 | 8.3:+68545783 | MS.gene051000:CDS |
| TTTACAGTGGATGACTTCAA+TGG | 0.477867 | 8.3:-68546295 | None:intergenic |
| GCATCAGTGTTGGAATTTGG+TGG | 0.480820 | 8.3:+68546147 | MS.gene051000:CDS |
| TCCAGTGCAAGAGATTTCTC+TGG | 0.482661 | 8.3:-68542643 | None:intergenic |
| TGCTATTATTGCAGATCCAC+AGG | 0.486210 | 8.3:+68542078 | MS.gene051000:CDS |
| CAACAAAGGCTCTTCTGGAA+TGG | 0.488636 | 8.3:-68545738 | None:intergenic |
| GGCGCTACGAGGAAACATTT+GGG | 0.488735 | 8.3:+68544398 | MS.gene051000:CDS |
| TAACCAATATCATGGTTTCC+GGG | 0.488932 | 8.3:-68543809 | None:intergenic |
| TTTATTGCTATGTCTCATAT+GGG | 0.489233 | 8.3:+68541684 | MS.gene051000:CDS |
| CATCATCTCATATTCATAGT+TGG | 0.491932 | 8.3:-68546236 | None:intergenic |
| TAAGGTTATACCATTAAATG+AGG | 0.492348 | 8.3:-68541772 | None:intergenic |
| TCCAGAGAAATCTCTTGCAC+TGG | 0.492822 | 8.3:+68542642 | MS.gene051000:CDS |
| ATGAAAGAAGCTTAGGAGAA+AGG | 0.493152 | 8.3:+68546323 | MS.gene051000:CDS |
| AATATGACATCAGGCTTGAA+AGG | 0.493799 | 8.3:-68542724 | None:intergenic |
| CAAGTTTCTGGCATCAGTGT+TGG | 0.495418 | 8.3:+68546137 | MS.gene051000:CDS |
| TGGATATGGCTTCAACCATC+GGG | 0.500859 | 8.3:+68546870 | MS.gene051000:CDS |
| CAAGAGATTTCTCTGGAAGA+TGG | 0.502729 | 8.3:-68542636 | None:intergenic |
| ATGTGCGTTAATAAGACTCT+TGG | 0.503310 | 8.3:-68544897 | None:intergenic |
| AGAAACTACAAATTTGCAGT+TGG | 0.503911 | 8.3:+68544424 | MS.gene051000:CDS |
| ATGGATATGGCTTCAACCAT+CGG | 0.507477 | 8.3:+68546869 | MS.gene051000:CDS |
| ATAATCGGGGAAGTACGATC+AGG | 0.513141 | 8.3:-68544954 | None:intergenic |
| AATAGCAACATCATGTAAAG+AGG | 0.517061 | 8.3:-68547007 | None:intergenic |
| TTTAGAGGATACATCACGCT+TGG | 0.527891 | 8.3:+68545155 | MS.gene051000:intron |
| TCTTACCTCCTTTATAGGCC+CGG | 0.534439 | 8.3:-68545559 | None:intergenic |
| CCAGAGTAAGAGGGCTAGGA+GGG | 0.547896 | 8.3:-68546101 | None:intergenic |
| CATCAGTGTTGGAATTTGGT+GGG | 0.548187 | 8.3:+68546148 | MS.gene051000:CDS |
| AGAACATTTCACCATAGAGA+AGG | 0.550129 | 8.3:-68541714 | None:intergenic |
| AGTAGCGTGCAGCACACTCT+AGG | 0.551919 | 8.3:+68545635 | MS.gene051000:intron |
| ACACTCTAGGTACTATAAGC+TGG | 0.553572 | 8.3:+68545648 | MS.gene051000:CDS |
| ACTGATAGCAGCAAGAAAGA+AGG | 0.554376 | 8.3:-68545689 | None:intergenic |
| TTTGTAAAGAATATCTCTGT+AGG | 0.554390 | 8.3:+68544776 | MS.gene051000:CDS |
| GCACATTCCTTTATATCGAT+CGG | 0.557787 | 8.3:+68544914 | MS.gene051000:CDS |
| TTAGGCGATTACTTCGACGG+AGG | 0.572407 | 8.3:+68542751 | MS.gene051000:CDS |
| TGAAACCAAAGAGAAGGATG+AGG | 0.575125 | 8.3:+68546210 | MS.gene051000:CDS |
| TCACTCATCAATCTAAATCC+GGG | 0.584269 | 8.3:+68545541 | MS.gene051000:CDS |
| GCCAGAGTAAGAGGGCTAGG+AGG | 0.585031 | 8.3:-68546102 | None:intergenic |
| GAACATTTCACCATAGAGAA+GGG | 0.588023 | 8.3:-68541713 | None:intergenic |
| ACTATGAATATGAGATGATG+TGG | 0.591849 | 8.3:+68546239 | MS.gene051000:CDS |
| TGCTAGAGGATCAAGCCCGA+TGG | 0.595792 | 8.3:-68546885 | None:intergenic |
| ATATTTGGTTTGAATGCACA+AGG | 0.598687 | 8.3:+68543755 | MS.gene051000:CDS |
| TGGTGCATTGATCATGATCA+TGG | 0.602304 | 8.3:-68545518 | None:intergenic |
| ACTTGTTGGCCAGAGTAAGA+GGG | 0.611472 | 8.3:-68546110 | None:intergenic |
| GGATTTAGATTGATGAGTGA+TGG | 0.611543 | 8.3:-68545538 | None:intergenic |
| TTCGATTTGCCTGTTCTGGG+AGG | 0.617099 | 8.3:-68546914 | None:intergenic |
| TCTTTCATTTGAATTTACAG+TGG | 0.622851 | 8.3:-68546308 | None:intergenic |
| TAACATAGATGTGTCAACAA+AGG | 0.627774 | 8.3:-68545752 | None:intergenic |
| GGTACTATAAGCTGGCAACA+AGG | 0.631008 | 8.3:+68545656 | MS.gene051000:CDS |
| ATAGCAACATCATGTAAAGA+GGG | 0.633257 | 8.3:-68547006 | None:intergenic |
| TAATCGGGGAAGTACGATCA+GGG | 0.636402 | 8.3:-68544953 | None:intergenic |
| TAAATCCGGGCCTATAAAGG+AGG | 0.637564 | 8.3:+68545554 | MS.gene051000:CDS |
| CATGAACAAGTGAAGAGAGG+TGG | 0.642057 | 8.3:-68541748 | None:intergenic |
| TCTTCATTATGCAATGCCGA+AGG | 0.659282 | 8.3:+68543838 | MS.gene051000:CDS |
| CTTTACCTGATTGATAATCG+GGG | 0.663508 | 8.3:-68544967 | None:intergenic |
| GGCCATGAACAAGTGAAGAG+AGG | 0.664083 | 8.3:-68541751 | None:intergenic |
| CCAGGGGTAATGTTGTATTG+CGG | 0.669455 | 8.3:+68546798 | MS.gene051000:intron |
| CGATCGGATGATACTTACTG+TGG | 0.675614 | 8.3:+68544930 | MS.gene051000:CDS |
| GTAGGTTATCAGGCGCTACG+AGG | 0.687405 | 8.3:+68544387 | MS.gene051000:intron |
| GAGATGATGTGGGATGCAGA+AGG | 0.690298 | 8.3:+68546250 | MS.gene051000:CDS |
| CTATGAATATGAGATGATGT+GGG | 0.698399 | 8.3:+68546240 | MS.gene051000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATCTTGTATATTAA+TGG | + | chr8.3:68542492-68542511 | MS.gene051000:intron | 10.0% |
| !!! | ATTTTATAAATTACAGATTT+GGG | - | chr8.3:68544273-68544292 | None:intergenic | 10.0% |
| !!! | TATTATGTTTTTTATTTTGT+TGG | + | chr8.3:68541910-68541929 | MS.gene051000:intron | 10.0% |
| !!! | TTTTGTAATTTATGAAATTT+TGG | + | chr8.3:68541853-68541872 | MS.gene051000:intron | 10.0% |
| !! | AAAATAGCTTATAACTTATA+CGG | + | chr8.3:68546612-68546631 | MS.gene051000:intron | 15.0% |
| !! | AAATGAAAACATAAACTAAA+TGG | - | chr8.3:68545459-68545478 | None:intergenic | 15.0% |
| !! | AATTAAATCCTTAACATTTA+TGG | - | chr8.3:68542154-68542173 | None:intergenic | 15.0% |
| !! | TTATTGTAAAAAATAATCCT+TGG | - | chr8.3:68543186-68543205 | None:intergenic | 15.0% |
| !!! | AAGGATTATTTTTTACAATA+AGG | + | chr8.3:68543185-68543204 | MS.gene051000:intron | 15.0% |
| !!! | ATTTTTAGAACTTTTGATTT+TGG | + | chr8.3:68545475-68545494 | MS.gene051000:intron | 15.0% |
| !!! | CATTTTATAAATTACAGATT+TGG | - | chr8.3:68544274-68544293 | None:intergenic | 15.0% |
| !!! | GTTTAAGTTGATTTTAAATT+TGG | + | chr8.3:68543891-68543910 | MS.gene051000:intron | 15.0% |
| !!! | TTTCTGTTATTTTTAAATTG+CGG | + | chr8.3:68545936-68545955 | MS.gene051000:intron | 15.0% |
| !!! | TTTTTATTTATTTGTTTCCA+AGG | + | chr8.3:68543166-68543185 | MS.gene051000:intron | 15.0% |
| !! | AAACAAGTTACGAAAATATT+TGG | - | chr8.3:68543411-68543430 | None:intergenic | 20.0% |
| !! | AAATATTTGGTATTACAAAG+AGG | - | chr8.3:68543398-68543417 | None:intergenic | 20.0% |
| !! | AAGTTAAAAGTTGTTTGAAA+TGG | - | chr8.3:68546174-68546193 | None:intergenic | 20.0% |
| !! | AATTTATAGACATGATTATC+TGG | + | chr8.3:68543311-68543330 | MS.gene051000:intron | 20.0% |
| !! | ACAAATATCTATTTGTGATT+TGG | + | chr8.3:68542808-68542827 | MS.gene051000:intron | 20.0% |
| !! | ACTTATTACCATAAATGTTA+AGG | + | chr8.3:68542143-68542162 | MS.gene051000:intron | 20.0% |
| !! | AGAGGATATATATGTATTTA+TGG | - | chr8.3:68543380-68543399 | None:intergenic | 20.0% |
| !! | ATATAAATGTGAAATTGCTT+TGG | - | chr8.3:68545782-68545801 | None:intergenic | 20.0% |
| !! | ATGATAATAGTTTCTTAAGA+AGG | - | chr8.3:68543264-68543283 | None:intergenic | 20.0% |
| !! | TAAATAGTCAATTTAAACGA+GGG | - | chr8.3:68543479-68543498 | None:intergenic | 20.0% |
| !! | TAAGGATTTAATTGATATCA+AGG | + | chr8.3:68542161-68542180 | MS.gene051000:intron | 20.0% |
| !! | TCATGAAAGAATTTCATATA+AGG | - | chr8.3:68543688-68543707 | None:intergenic | 20.0% |
| !! | TCTCTAATATTTAACAGATT+TGG | - | chr8.3:68546738-68546757 | None:intergenic | 20.0% |
| !! | TTAAATAGTCAATTTAAACG+AGG | - | chr8.3:68543480-68543499 | None:intergenic | 20.0% |
| !! | TTATTTAGTATGCTATTCTA+GGG | + | chr8.3:68542970-68542989 | MS.gene051000:intron | 20.0% |
| !! | TTTATTTAGTATGCTATTCT+AGG | + | chr8.3:68542969-68542988 | MS.gene051000:intron | 20.0% |
| !!! | AGATTTTCTATAAGAGAAAA+CGG | + | chr8.3:68545852-68545871 | MS.gene051000:intron | 20.0% |
| !!! | GAAATTCTTTCATGATTTTT+TGG | + | chr8.3:68543693-68543712 | MS.gene051000:intron | 20.0% |
| !!! | GAATTCATTATATTTTCTAC+AGG | + | chr8.3:68544716-68544735 | MS.gene051000:intron | 20.0% |
| !!! | TCTCTTTCTTTAATTTTTAG+AGG | + | chr8.3:68545140-68545159 | MS.gene051000:intron | 20.0% |
| !!! | TTTTCACTTTTTTCAATTCT+GGG | + | chr8.3:68541806-68541825 | MS.gene051000:intron | 20.0% |
| !!! | TTTTGTTGGAAATTAGTTTA+TGG | + | chr8.3:68541924-68541943 | MS.gene051000:intron | 20.0% |
| ! | AAACAATGAATTAGATGTAC+AGG | - | chr8.3:68544812-68544831 | None:intergenic | 25.0% |
| ! | AAATTTCAAACACAGTTGTT+TGG | + | chr8.3:68543601-68543620 | MS.gene051000:intron | 25.0% |
| ! | AAGTACATGGAAAACATATT+TGG | + | chr8.3:68546379-68546398 | MS.gene051000:intron | 25.0% |
| ! | AATAACATGTTGAATACCTT+CGG | - | chr8.3:68543857-68543876 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGTTGA+CGG | - | chr8.3:68546566-68546585 | None:intergenic | 25.0% |
| ! | AATAAGGTAAAAACAGCTTA+TGG | + | chr8.3:68543040-68543059 | MS.gene051000:intron | 25.0% |
| ! | AATCGCTTAAAACGTATATT+TGG | + | chr8.3:68543740-68543759 | MS.gene051000:CDS | 25.0% |
| ! | AATTCAAATGAAAGAAGCTT+AGG | + | chr8.3:68546316-68546335 | MS.gene051000:CDS | 25.0% |
| ! | ACATAATTCTGATATCTGAA+TGG | - | chr8.3:68545284-68545303 | None:intergenic | 25.0% |
| ! | AGATTAATAGAAATGTGACA+TGG | + | chr8.3:68544011-68544030 | MS.gene051000:intron | 25.0% |
| ! | AGCAATTTCACATTTATATG+TGG | + | chr8.3:68545783-68545802 | MS.gene051000:CDS | 25.0% |
| ! | AGTAAAGTACAAAAAACTTG+TGG | - | chr8.3:68544861-68544880 | None:intergenic | 25.0% |
| ! | AGTACACAGTTAAATAAAGT+AGG | - | chr8.3:68544315-68544334 | None:intergenic | 25.0% |
| ! | ATATATTAGATTCACATCCA+CGG | - | chr8.3:68542572-68542591 | None:intergenic | 25.0% |
| ! | GAAAAATATTGAAGTCTCAA+TGG | - | chr8.3:68545920-68545939 | None:intergenic | 25.0% |
| ! | TAAAAATGAAACCAAAGAGA+AGG | + | chr8.3:68546204-68546223 | MS.gene051000:CDS | 25.0% |
| ! | TAAGGTTATACCATTAAATG+AGG | - | chr8.3:68541775-68541794 | None:intergenic | 25.0% |
| ! | TACTCTTCATCTGATAAATA+AGG | - | chr8.3:68542778-68542797 | None:intergenic | 25.0% |
| ! | TCTGTAATTTATAAAATGCG+AGG | + | chr8.3:68544276-68544295 | MS.gene051000:intron | 25.0% |
| ! | TCTTTCATTTGAATTTACAG+TGG | - | chr8.3:68546311-68546330 | None:intergenic | 25.0% |
| ! | TTTATTGCTATGTCTCATAT+GGG | + | chr8.3:68541684-68541703 | MS.gene051000:CDS | 25.0% |
| ! | TTTCACATTTATATGTGGTA+TGG | + | chr8.3:68545788-68545807 | MS.gene051000:intron | 25.0% |
| ! | TTTCTCTTATAGAAAATCTC+AGG | - | chr8.3:68545851-68545870 | None:intergenic | 25.0% |
| ! | TTTGTAAAGAATATCTCTGT+AGG | + | chr8.3:68544776-68544795 | MS.gene051000:CDS | 25.0% |
| !! | AAAAACTTGTGGATTATTAC+AGG | - | chr8.3:68544850-68544869 | None:intergenic | 25.0% |
| !! | AACTGTGTTTGAAATTTATC+AGG | - | chr8.3:68543598-68543617 | None:intergenic | 25.0% |
| !! | AACTTTACCTGATTGATAAT+CGG | - | chr8.3:68544972-68544991 | None:intergenic | 25.0% |
| !! | ACTGTGTTTGAAATTTATCA+GGG | - | chr8.3:68543597-68543616 | None:intergenic | 25.0% |
| !! | ATTTTCATAAGTCTCCATAA+TGG | + | chr8.3:68546583-68546602 | MS.gene051000:intron | 25.0% |
| !! | CAAAAATGATGATTTGTGAT+TGG | + | chr8.3:68542431-68542450 | MS.gene051000:intron | 25.0% |
| !! | CAACTTTTACATAATCAGTT+TGG | - | chr8.3:68542060-68542079 | None:intergenic | 25.0% |
| !! | GATTTTCTATAAGAGAAAAC+GGG | + | chr8.3:68545853-68545872 | MS.gene051000:intron | 25.0% |
| !! | TCATGTAAAACAGTTTTACA+CGG | - | chr8.3:68546009-68546028 | None:intergenic | 25.0% |
| !!! | AATTAGTTTATGGAGTTTTG+TGG | + | chr8.3:68541934-68541953 | MS.gene051000:intron | 25.0% |
| !!! | AGTACATGCCATTTTAATAT+CGG | - | chr8.3:68542235-68542254 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTGTAAGTATGAA+AGG | + | chr8.3:68544037-68544056 | MS.gene051000:intron | 25.0% |
| !!! | CTTGTTGTCTATTATGTTTT+TGG | + | chr8.3:68542856-68542875 | MS.gene051000:intron | 25.0% |
| !!! | CTTTTCACTTTTTTCAATTC+TGG | + | chr8.3:68541805-68541824 | MS.gene051000:intron | 25.0% |
| !!! | TGTTTTTACCTTATTTCACT+AGG | - | chr8.3:68543035-68543054 | None:intergenic | 25.0% |
| !!! | TTTGTGTTTTAGTTTTGTCT+CGG | + | chr8.3:68542257-68542276 | MS.gene051000:intron | 25.0% |
| !!! | TTTTTTAACATAACAGCTCA+TGG | + | chr8.3:68542600-68542619 | MS.gene051000:intron | 25.0% |
| AAACAGCTTATGGACATAAA+AGG | + | chr8.3:68543050-68543069 | MS.gene051000:intron | 30.0% | |
| AATAGCAACATCATGTAAAG+AGG | - | chr8.3:68547010-68547029 | None:intergenic | 30.0% | |
| ACAATAAGGTCAAAAGTGAA+TGG | + | chr8.3:68543199-68543218 | MS.gene051000:intron | 30.0% | |
| ACTATGAATATGAGATGATG+TGG | + | chr8.3:68546239-68546258 | MS.gene051000:CDS | 30.0% | |
| AGAAACTACAAATTTGCAGT+TGG | + | chr8.3:68544424-68544443 | MS.gene051000:CDS | 30.0% | |
| ATAACCAATATCATGGTTTC+CGG | - | chr8.3:68543813-68543832 | None:intergenic | 30.0% | |
| ATAGCAACATCATGTAAAGA+GGG | - | chr8.3:68547009-68547028 | None:intergenic | 30.0% | |
| ATATCTCTGTAGGTATAAAC+TGG | + | chr8.3:68544786-68544805 | MS.gene051000:intron | 30.0% | |
| ATCACTCATCAATCTAAATC+CGG | + | chr8.3:68545540-68545559 | MS.gene051000:CDS | 30.0% | |
| ATTAGTCGCCGATATTAAAA+TGG | + | chr8.3:68542224-68542243 | MS.gene051000:intron | 30.0% | |
| ATTGAAGACTCATTTCAATC+AGG | + | chr8.3:68542196-68542215 | MS.gene051000:intron | 30.0% | |
| ATTGTGATTCACATAAAGCA+AGG | + | chr8.3:68544182-68544201 | MS.gene051000:intron | 30.0% | |
| CAATTTAAACGAGGGATTAA+GGG | - | chr8.3:68543471-68543490 | None:intergenic | 30.0% | |
| CAGCAGATAAAAAAAAACAC+AGG | - | chr8.3:68546778-68546797 | None:intergenic | 30.0% | |
| CATCATCTCATATTCATAGT+TGG | - | chr8.3:68546239-68546258 | None:intergenic | 30.0% | |
| CCTAAAAACAATATGACATC+AGG | - | chr8.3:68542736-68542755 | None:intergenic | 30.0% | |
| CTAAGAAATCACAGTTATCT+AGG | - | chr8.3:68546414-68546433 | None:intergenic | 30.0% | |
| CTATGAATATGAGATGATGT+GGG | + | chr8.3:68546240-68546259 | MS.gene051000:CDS | 30.0% | |
| CTTTATTGCTATGTCTCATA+TGG | + | chr8.3:68541683-68541702 | MS.gene051000:CDS | 30.0% | |
| GACTTTCATAACCAATATCA+TGG | - | chr8.3:68543820-68543839 | None:intergenic | 30.0% | |
| GATTTGGGAATTATGCAAAA+TGG | - | chr8.3:68544258-68544277 | None:intergenic | 30.0% | |
| GCCAATTTAATGAAAATGCA+CGG | - | chr8.3:68546033-68546052 | None:intergenic | 30.0% | |
| GGTGAAAATATTGTTTCCTT+TGG | + | chr8.3:68543633-68543652 | MS.gene051000:intron | 30.0% | |
| GTGAAAAGATGAAGACTTTA+AGG | - | chr8.3:68541793-68541812 | None:intergenic | 30.0% | |
| TAACATAGATGTGTCAACAA+AGG | - | chr8.3:68545755-68545774 | None:intergenic | 30.0% | |
| TACGTAAGTTACTCATCTTA+TGG | + | chr8.3:68545198-68545217 | MS.gene051000:intron | 30.0% | |
| TCAATAGTACATCAATGTCA+AGG | - | chr8.3:68543981-68544000 | None:intergenic | 30.0% | |
| TCAATTTAAACGAGGGATTA+AGG | - | chr8.3:68543472-68543491 | None:intergenic | 30.0% | |
| TCTATTAATGTATGTTTCCG+TGG | + | chr8.3:68542552-68542571 | MS.gene051000:intron | 30.0% | |
| TGAGCTATCATGTTTCATTA+TGG | + | chr8.3:68544514-68544533 | MS.gene051000:intron | 30.0% | |
| TTGAAGACTCATTTCAATCA+GGG | + | chr8.3:68542197-68542216 | MS.gene051000:intron | 30.0% | |
| TTTCTATGCTAAAGCGTAAA+GGG | + | chr8.3:68543567-68543586 | MS.gene051000:intron | 30.0% | |
| TTTCTCTGTGAATATGGATA+TGG | + | chr8.3:68546856-68546875 | MS.gene051000:CDS | 30.0% | |
| ! | AAATGTGACATGGTAGATTT+TGG | + | chr8.3:68544021-68544040 | MS.gene051000:intron | 30.0% |
| ! | AAGAACGTAATTTTCTCATC+TGG | + | chr8.3:68545578-68545597 | MS.gene051000:intron | 30.0% |
| ! | ACCGTGCATTTTCATTAAAT+TGG | + | chr8.3:68546029-68546048 | MS.gene051000:intron | 30.0% |
| ! | ACTTTACCTGATTGATAATC+GGG | - | chr8.3:68544971-68544990 | None:intergenic | 30.0% |
| ! | AGAACGTAATTTTCTCATCT+GGG | + | chr8.3:68545579-68545598 | MS.gene051000:intron | 30.0% |
| ! | ATTTTCAGTGCAATTCTTTG+TGG | - | chr8.3:68543294-68543313 | None:intergenic | 30.0% |
| ! | CTGATTTGAACTTATCTACT+AGG | + | chr8.3:68546479-68546498 | MS.gene051000:intron | 30.0% |
| ! | CTGTGTTTGAAATTTATCAG+GGG | - | chr8.3:68543596-68543615 | None:intergenic | 30.0% |
| ! | GGTTCATCACAATTTTCTAA+CGG | - | chr8.3:68542294-68542313 | None:intergenic | 30.0% |
| ! | TTACATGATGTTGCTATTCA+AGG | + | chr8.3:68547012-68547031 | MS.gene051000:CDS | 30.0% |
| !! | ATATTTGGTTTGAATGCACA+AGG | + | chr8.3:68543755-68543774 | MS.gene051000:CDS | 30.0% |
| !! | CCTGATGTCATATTGTTTTT+AGG | + | chr8.3:68542733-68542752 | MS.gene051000:CDS | 30.0% |
| !!! | AAACTAGTTTTACACTGATG+CGG | + | chr8.3:68545893-68545912 | MS.gene051000:intron | 30.0% |
| !!! | TTATGGTTTTGTCATGCATT+TGG | - | chr8.3:68543363-68543382 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTATCTGCTGCCA+GGG | + | chr8.3:68546781-68546800 | MS.gene051000:intron | 30.0% |
| AACTCCTGATATTTCCATGT+AGG | - | chr8.3:68545974-68545993 | None:intergenic | 35.0% | |
| AAGATTTCAGACAAAACCCA+CGG | - | chr8.3:68545072-68545091 | None:intergenic | 35.0% | |
| AAGCCAGTTTACTATATTCC+CGG | + | chr8.3:68543791-68543810 | MS.gene051000:CDS | 35.0% | |
| AAGTTACTCATCTTATGGCA+TGG | + | chr8.3:68545203-68545222 | MS.gene051000:intron | 35.0% | |
| AATATGACATCAGGCTTGAA+AGG | - | chr8.3:68542727-68542746 | None:intergenic | 35.0% | |
| AGAACATTTCACCATAGAGA+AGG | - | chr8.3:68541717-68541736 | None:intergenic | 35.0% | |
| AGCAGATTTCTCTGTGAATA+TGG | + | chr8.3:68546850-68546869 | MS.gene051000:CDS | 35.0% | |
| AGTTGTCAAAAACAATCAGC+AGG | - | chr8.3:68544112-68544131 | None:intergenic | 35.0% | |
| ATAGATCCAACACATCACAT+TGG | - | chr8.3:68541893-68541912 | None:intergenic | 35.0% | |
| ATGAAAGAAGCTTAGGAGAA+AGG | + | chr8.3:68546323-68546342 | MS.gene051000:CDS | 35.0% | |
| ATGAGAAGCCTAGTGAAATA+AGG | + | chr8.3:68543024-68543043 | MS.gene051000:intron | 35.0% | |
| ATGGTGAAATGTTCTCTTAC+TGG | + | chr8.3:68541722-68541741 | MS.gene051000:CDS | 35.0% | |
| ATGTGCGTTAATAAGACTCT+TGG | - | chr8.3:68544900-68544919 | None:intergenic | 35.0% | |
| CAACAAGTAACACAAGTTTC+TGG | + | chr8.3:68546125-68546144 | MS.gene051000:CDS | 35.0% | |
| CATGATAGCTCAAATCTACA+AGG | - | chr8.3:68544506-68544525 | None:intergenic | 35.0% | |
| CATGTTGTAGATACAACCAA+AGG | - | chr8.3:68543652-68543671 | None:intergenic | 35.0% | |
| CCAACTGCTAGAAAAAATAC+TGG | + | chr8.3:68546821-68546840 | MS.gene051000:CDS | 35.0% | |
| CCATGTACTTTGTAATAGCA+CGG | - | chr8.3:68546369-68546388 | None:intergenic | 35.0% | |
| CGTTTATGAACCAACATAGA+TGG | + | chr8.3:68542897-68542916 | MS.gene051000:intron | 35.0% | |
| CTATACAAAATCCCATACAC+CGG | - | chr8.3:68543942-68543961 | None:intergenic | 35.0% | |
| CTTAGGAGAAAGGTAAACTT+TGG | + | chr8.3:68546333-68546352 | MS.gene051000:intron | 35.0% | |
| GAACATTTCACCATAGAGAA+GGG | - | chr8.3:68541716-68541735 | None:intergenic | 35.0% | |
| GCACATTCCTTTATATCGAT+CGG | + | chr8.3:68544914-68544933 | MS.gene051000:CDS | 35.0% | |
| GGATTTAGATTGATGAGTGA+TGG | - | chr8.3:68545541-68545560 | None:intergenic | 35.0% | |
| GTATCATCCGATCGATATAA+AGG | - | chr8.3:68544924-68544943 | None:intergenic | 35.0% | |
| GTGCACTTTGTAAGCAATTT+AGG | + | chr8.3:68542940-68542959 | MS.gene051000:intron | 35.0% | |
| GTTTCTATGCTAAAGCGTAA+AGG | + | chr8.3:68543566-68543585 | MS.gene051000:intron | 35.0% | |
| TAACCAATATCATGGTTTCC+GGG | - | chr8.3:68543812-68543831 | None:intergenic | 35.0% | |
| TAAGGTCAAAAGTGAATGGA+TGG | + | chr8.3:68543203-68543222 | MS.gene051000:intron | 35.0% | |
| TACGTTCTTACCTCCTTTAT+AGG | - | chr8.3:68545567-68545586 | None:intergenic | 35.0% | |
| TATTGATATCTGCAGATTGC+CGG | + | chr8.3:68543920-68543939 | MS.gene051000:intron | 35.0% | |
| TCACTCATCAATCTAAATCC+GGG | + | chr8.3:68545541-68545560 | MS.gene051000:CDS | 35.0% | |
| TGAATGGATGGATATTTCCA+GGG | + | chr8.3:68543215-68543234 | MS.gene051000:intron | 35.0% | |
| TGCACAAAAGTCTAAAGAGA+TGG | - | chr8.3:68545362-68545381 | None:intergenic | 35.0% | |
| TTATGGCATGGAATTTGCAT+GGG | + | chr8.3:68545215-68545234 | MS.gene051000:intron | 35.0% | |
| TTGTTCATGGCCTCATTTAA+TGG | + | chr8.3:68541762-68541781 | MS.gene051000:CDS | 35.0% | |
| TTTACAGTGGATGACTTCAA+TGG | - | chr8.3:68546298-68546317 | None:intergenic | 35.0% | |
| TTTCCGGGAATATAGTAAAC+TGG | - | chr8.3:68543797-68543816 | None:intergenic | 35.0% | |
| ! | AAACTCTTGATGGTAAACTG+GGG | + | chr8.3:68544476-68544495 | MS.gene051000:intron | 35.0% |
| ! | ACAAACTCTTGATGGTAAAC+TGG | + | chr8.3:68544474-68544493 | MS.gene051000:intron | 35.0% |
| ! | CAAACTCTTGATGGTAAACT+GGG | + | chr8.3:68544475-68544494 | MS.gene051000:intron | 35.0% |
| ! | CTTTACCTGATTGATAATCG+GGG | - | chr8.3:68544970-68544989 | None:intergenic | 35.0% |
| ! | TGATGTTGCTATTCAAGGAT+TGG | + | chr8.3:68547017-68547036 | MS.gene051000:CDS | 35.0% |
| ! | TTAAGAGTGAAGACTCGTTT+TGG | - | chr8.3:68542315-68542334 | None:intergenic | 35.0% |
| !! | CAGAAACTTGTGTTACTTGT+TGG | - | chr8.3:68546127-68546146 | None:intergenic | 35.0% |
| !! | GCTATTTTCGTAAGCCATTA+TGG | - | chr8.3:68546600-68546619 | None:intergenic | 35.0% |
| !! | TATGATTTGCTGCAATTTGC+AGG | + | chr8.3:68546056-68546075 | MS.gene051000:intron | 35.0% |
| !! | TTTTTAGGCGATTACTTCGA+CGG | + | chr8.3:68542748-68542767 | MS.gene051000:CDS | 35.0% |
| !!! | CCAGTATTTTTTCTAGCAGT+TGG | - | chr8.3:68546824-68546843 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTTATCTGCTGCC+AGG | + | chr8.3:68546780-68546799 | MS.gene051000:intron | 35.0% |
| !!! | TGATTTTTTGGATCGACAGA+TGG | + | chr8.3:68543705-68543724 | MS.gene051000:intron | 35.0% |
| !!! | TGGCAGAAGCTTATTTTATC+TGG | + | chr8.3:68545495-68545514 | MS.gene051000:intron | 35.0% |
| !!! | TTTTTTTTATCTGCTGCCAG+GGG | + | chr8.3:68546782-68546801 | MS.gene051000:intron | 35.0% |
| AAATAGACATCGAGCTCGTA+AGG | - | chr8.3:68543149-68543168 | None:intergenic | 40.0% | |
| ACACTCTAGGTACTATAAGC+TGG | + | chr8.3:68545648-68545667 | MS.gene051000:CDS | 40.0% | |
| ACGGCATAACAGTATTCTGA+GGG | - | chr8.3:68545053-68545072 | None:intergenic | 40.0% | |
| ACTGACATCATGAACTTGTC+TGG | + | chr8.3:68546451-68546470 | MS.gene051000:intron | 40.0% | |
| ACTGATAGCAGCAAGAAAGA+AGG | - | chr8.3:68545692-68545711 | None:intergenic | 40.0% | |
| AGCATCTGACTTCTCAAACT+TGG | + | chr8.3:68544750-68544769 | MS.gene051000:CDS | 40.0% | |
| AGGACCTACATGGAAATATC+AGG | + | chr8.3:68545967-68545986 | MS.gene051000:intron | 40.0% | |
| AGGCACTTAAAGGACTTACT+CGG | - | chr8.3:68543126-68543145 | None:intergenic | 40.0% | |
| AGGCTTCTCATAATAGCTCA+TGG | - | chr8.3:68543015-68543034 | None:intergenic | 40.0% | |
| ATCTAAATCCGGGCCTATAA+AGG | + | chr8.3:68545551-68545570 | MS.gene051000:CDS | 40.0% | |
| ATGGATATGGCTTCAACCAT+CGG | + | chr8.3:68546869-68546888 | MS.gene051000:CDS | 40.0% | |
| ATTAAGGGAGGGGGAAAAAA+GGG | - | chr8.3:68543456-68543475 | None:intergenic | 40.0% | |
| ATTCCCGGAAACCATGATAT+TGG | + | chr8.3:68543806-68543825 | MS.gene051000:CDS | 40.0% | |
| CATCATGAACTTGTCTGGAT+TGG | + | chr8.3:68546456-68546475 | MS.gene051000:intron | 40.0% | |
| CTTATGGCATGGAATTTGCA+TGG | + | chr8.3:68545214-68545233 | MS.gene051000:intron | 40.0% | |
| GAAATATCAGGAGTTCTCAC+TGG | + | chr8.3:68545979-68545998 | MS.gene051000:intron | 40.0% | |
| GAACCAACATAGATGGTAAG+TGG | + | chr8.3:68542904-68542923 | MS.gene051000:intron | 40.0% | |
| GAAGTGTGCGTAGTAATCTT+TGG | - | chr8.3:68546955-68546974 | None:intergenic | 40.0% | |
| GAATGGATGGATATTTCCAG+GGG | + | chr8.3:68543216-68543235 | MS.gene051000:intron | 40.0% | |
| GCATCTGACTTCTCAAACTT+GGG | + | chr8.3:68544751-68544770 | MS.gene051000:CDS | 40.0% | |
| GTAGTTTCAAGAACAGCAAC+TGG | - | chr8.3:68545111-68545130 | None:intergenic | 40.0% | |
| GTGAATGGATGGATATTTCC+AGG | + | chr8.3:68543214-68543233 | MS.gene051000:intron | 40.0% | |
| TACTTCCCCGATTATCAATC+AGG | + | chr8.3:68544962-68544981 | MS.gene051000:CDS | 40.0% | |
| TCACAACCAACACAAGATGA+TGG | - | chr8.3:68544063-68544082 | None:intergenic | 40.0% | |
| TCACCACTTACCATCTATGT+TGG | - | chr8.3:68542910-68542929 | None:intergenic | 40.0% | |
| TCAGAATACTGTTATGCCGT+GGG | + | chr8.3:68545053-68545072 | MS.gene051000:intron | 40.0% | |
| TCTTCATTATGCAATGCCGA+AGG | + | chr8.3:68543838-68543857 | MS.gene051000:CDS | 40.0% | |
| TGAAACCAAAGAGAAGGATG+AGG | + | chr8.3:68546210-68546229 | MS.gene051000:CDS | 40.0% | |
| TGCTATTATTGCAGATCCAC+AGG | + | chr8.3:68542078-68542097 | MS.gene051000:CDS | 40.0% | |
| TTAAACGAGGGATTAAGGGA+GGG | - | chr8.3:68543467-68543486 | None:intergenic | 40.0% | |
| TTTAAACGAGGGATTAAGGG+AGG | - | chr8.3:68543468-68543487 | None:intergenic | 40.0% | |
| TTTAGAGGATACATCACGCT+TGG | + | chr8.3:68545155-68545174 | MS.gene051000:intron | 40.0% | |
| TTTGCATGGGCTTTCATAAG+TGG | + | chr8.3:68545228-68545247 | MS.gene051000:intron | 40.0% | |
| ! | AACAGATTTGGTCGCTGTTT+GGG | - | chr8.3:68546726-68546745 | None:intergenic | 40.0% |
| ! | ACAGTTGTTTGGCTCATCTA+TGG | + | chr8.3:68543612-68543631 | MS.gene051000:intron | 40.0% |
| ! | ATTAGAGCTTGTGACTTGTG+AGG | + | chr8.3:68546502-68546521 | MS.gene051000:intron | 40.0% |
| ! | CAAGAGATTTCTCTGGAAGA+TGG | - | chr8.3:68542639-68542658 | None:intergenic | 40.0% |
| ! | CATCAGTGTTGGAATTTGGT+GGG | + | chr8.3:68546148-68546167 | MS.gene051000:CDS | 40.0% |
| ! | CCGTGCTATTACAAAGTACA+TGG | + | chr8.3:68546366-68546385 | MS.gene051000:intron | 40.0% |
| ! | GACAAGTGTCTGAAATACTG+CGG | - | chr8.3:68544156-68544175 | None:intergenic | 40.0% |
| ! | GAGAAGTCAGATGCTTTTGT+GGG | - | chr8.3:68544745-68544764 | None:intergenic | 40.0% |
| ! | GTCGATTCACAAACTCTTGA+TGG | + | chr8.3:68544466-68544485 | MS.gene051000:CDS | 40.0% |
| ! | GTTTTGTCTCGGAGTGAATT+GGG | + | chr8.3:68542268-68542287 | MS.gene051000:intron | 40.0% |
| ! | TAACAGATTTGGTCGCTGTT+TGG | - | chr8.3:68546727-68546746 | None:intergenic | 40.0% |
| ! | TGAGAAGTCAGATGCTTTTG+TGG | - | chr8.3:68544746-68544765 | None:intergenic | 40.0% |
| ! | TGGTGCATTGATCATGATCA+TGG | - | chr8.3:68545521-68545540 | None:intergenic | 40.0% |
| ! | TTTTTGGATCGACAGATGGA+AGG | + | chr8.3:68543709-68543728 | MS.gene051000:intron | 40.0% |
| !! | AGTTTTGTCTCGGAGTGAAT+TGG | + | chr8.3:68542267-68542286 | MS.gene051000:intron | 40.0% |
| !! | GTTTTCGATTTGCCTGTTCT+GGG | - | chr8.3:68546920-68546939 | None:intergenic | 40.0% |
| !! | TCTTCTGGAATGGAAGCATT+TGG | - | chr8.3:68545731-68545750 | None:intergenic | 40.0% |
| !! | TGTTTTCGATTTGCCTGTTC+TGG | - | chr8.3:68546921-68546940 | None:intergenic | 40.0% |
| AAAGCAGAAAAGCTCACCTG+TGG | - | chr8.3:68542097-68542116 | None:intergenic | 45.0% | |
| AGAGATGGTAGATGACTCAC+AGG | - | chr8.3:68545347-68545366 | None:intergenic | 45.0% | |
| AGGACTTACTCGGTTTCTGT+TGG | - | chr8.3:68543116-68543135 | None:intergenic | 45.0% | |
| CACCTCTCTTCACTTGTTCA+TGG | + | chr8.3:68541749-68541768 | MS.gene051000:CDS | 45.0% | |
| CACGGCATAACAGTATTCTG+AGG | - | chr8.3:68545054-68545073 | None:intergenic | 45.0% | |
| CATGAACAAGTGAAGAGAGG+TGG | - | chr8.3:68541751-68541770 | None:intergenic | 45.0% | |
| CCAGGGGTAATGTTGTATTG+CGG | + | chr8.3:68546798-68546817 | MS.gene051000:intron | 45.0% | |
| CCTGCTGCTAGCAGAAAATA+AGG | - | chr8.3:68542015-68542034 | None:intergenic | 45.0% | |
| CGATCGGATGATACTTACTG+TGG | + | chr8.3:68544930-68544949 | MS.gene051000:CDS | 45.0% | |
| CTATGCTAAAGCGTAAAGGG+TGG | + | chr8.3:68543570-68543589 | MS.gene051000:intron | 45.0% | |
| CTCAGAATACTGTTATGCCG+TGG | + | chr8.3:68545052-68545071 | MS.gene051000:intron | 45.0% | |
| GAAAGGCCATCATCTTGTGT+TGG | + | chr8.3:68544054-68544073 | MS.gene051000:intron | 45.0% | |
| GATTAAGGGAGGGGGAAAAA+AGG | - | chr8.3:68543457-68543476 | None:intergenic | 45.0% | |
| GCAAAAATACCTCCCAGAAC+AGG | + | chr8.3:68546905-68546924 | MS.gene051000:CDS | 45.0% | |
| GGTAAGTGGTGACTTCTTGA+GGG | + | chr8.3:68542918-68542937 | MS.gene051000:intron | 45.0% | |
| GGTACTATAAGCTGGCAACA+AGG | + | chr8.3:68545656-68545675 | MS.gene051000:CDS | 45.0% | |
| TAAACGAGGGATTAAGGGAG+GGG | - | chr8.3:68543466-68543485 | None:intergenic | 45.0% | |
| TAAATCCGGGCCTATAAAGG+AGG | + | chr8.3:68545554-68545573 | MS.gene051000:CDS | 45.0% | |
| TCATTGCATTGCATCCACGT+AGG | + | chr8.3:68544369-68544388 | MS.gene051000:intron | 45.0% | |
| TCCAGAGAAATCTCTTGCAC+TGG | + | chr8.3:68542642-68542661 | MS.gene051000:CDS | 45.0% | |
| TCCAGTGCAAGAGATTTCTC+TGG | - | chr8.3:68542646-68542665 | None:intergenic | 45.0% | |
| TCTTACCTCCTTTATAGGCC+CGG | - | chr8.3:68545562-68545581 | None:intergenic | 45.0% | |
| TGGATATGGCTTCAACCATC+GGG | + | chr8.3:68546870-68546889 | MS.gene051000:CDS | 45.0% | |
| TGGTAAGTGGTGACTTCTTG+AGG | + | chr8.3:68542917-68542936 | MS.gene051000:intron | 45.0% | |
| TGTAAAACATGCATAGCCCC+TGG | - | chr8.3:68543235-68543254 | None:intergenic | 45.0% | |
| TGTGTCAACAAAGGCTCTTC+TGG | - | chr8.3:68545746-68545765 | None:intergenic | 45.0% | |
| TTGCATCCACGTAGGTTATC+AGG | + | chr8.3:68544377-68544396 | MS.gene051000:intron | 45.0% | |
| TTTCAAGAACAGCAACTGGC+AGG | - | chr8.3:68545107-68545126 | None:intergenic | 45.0% | |
| ! | ACTTGTTGGCCAGAGTAAGA+GGG | - | chr8.3:68546113-68546132 | None:intergenic | 45.0% |
| ! | ATAATCGGGGAAGTACGATC+AGG | - | chr8.3:68544957-68544976 | None:intergenic | 45.0% |
| ! | CAACAAAGGCTCTTCTGGAA+TGG | - | chr8.3:68545741-68545760 | None:intergenic | 45.0% |
| ! | CTGGCATCAGTGTTGGAATT+TGG | + | chr8.3:68546144-68546163 | MS.gene051000:CDS | 45.0% |
| ! | CTTTTGTGCATCACTGTCGA+CGG | + | chr8.3:68545372-68545391 | MS.gene051000:intron | 45.0% |
| ! | GCATCAGTGTTGGAATTTGG+TGG | + | chr8.3:68546147-68546166 | MS.gene051000:CDS | 45.0% |
| ! | TAATCGGGGAAGTACGATCA+GGG | - | chr8.3:68544956-68544975 | None:intergenic | 45.0% |
| ! | TACTTGTTGGCCAGAGTAAG+AGG | - | chr8.3:68546114-68546133 | None:intergenic | 45.0% |
| ! | TGTGACTTGTGAGGCTGTAT+GGG | + | chr8.3:68546511-68546530 | MS.gene051000:intron | 45.0% |
| ! | TTGTGACTTGTGAGGCTGTA+TGG | + | chr8.3:68546510-68546529 | MS.gene051000:intron | 45.0% |
| !! | CAAGTTTCTGGCATCAGTGT+TGG | + | chr8.3:68546137-68546156 | MS.gene051000:CDS | 45.0% |
| !!! | CCTTATTTTCTGCTAGCAGC+AGG | + | chr8.3:68542012-68542031 | MS.gene051000:intron | 45.0% |
| !!! | CTGGGAGGTATTTTTGCTAG+AGG | - | chr8.3:68546902-68546921 | None:intergenic | 45.0% |
| AAACGAGGGATTAAGGGAGG+GGG | - | chr8.3:68543465-68543484 | None:intergenic | 50.0% | |
| AGGCGCTACGAGGAAACATT+TGG | + | chr8.3:68544397-68544416 | MS.gene051000:CDS | 50.0% | |
| ATCTGCAGATTGCCGGTGTA+TGG | + | chr8.3:68543927-68543946 | MS.gene051000:intron | 50.0% | |
| CCGCAATACAACATTACCCC+TGG | - | chr8.3:68546801-68546820 | None:intergenic | 50.0% | |
| GAGATGATGTGGGATGCAGA+AGG | + | chr8.3:68546250-68546269 | MS.gene051000:CDS | 50.0% | |
| GAGCTGCCAATGTGATGTGT+TGG | + | chr8.3:68541884-68541903 | MS.gene051000:intron | 50.0% | |
| GGCATCCTCATCCTTCTCTT+TGG | - | chr8.3:68546218-68546237 | None:intergenic | 50.0% | |
| GGCCATGAACAAGTGAAGAG+AGG | - | chr8.3:68541754-68541773 | None:intergenic | 50.0% | |
| GGCGCTACGAGGAAACATTT+GGG | + | chr8.3:68544398-68544417 | MS.gene051000:CDS | 50.0% | |
| TAGACATCGAGCTCGTAAGG+AGG | - | chr8.3:68543146-68543165 | None:intergenic | 50.0% | |
| TCTGCAGATTGCCGGTGTAT+GGG | + | chr8.3:68543928-68543947 | MS.gene051000:intron | 50.0% | |
| TGACATCAGGCTTGAAAGGC+AGG | - | chr8.3:68542723-68542742 | None:intergenic | 50.0% | |
| TGGGCACTAACCCTTCTCTA+TGG | + | chr8.3:68541703-68541722 | MS.gene051000:CDS | 50.0% | |
| TTAGGCGATTACTTCGACGG+AGG | + | chr8.3:68542751-68542770 | MS.gene051000:CDS | 50.0% | |
| ! | AGGCTGTATGGGAGAGCATA+TGG | + | chr8.3:68546522-68546541 | MS.gene051000:intron | 50.0% |
| ! | TTCGATTTGCCTGTTCTGGG+AGG | - | chr8.3:68546917-68546936 | None:intergenic | 50.0% |
| !! | GCTCGTAAGGAGGCACTTAA+AGG | - | chr8.3:68543136-68543155 | None:intergenic | 50.0% |
| AGTAGCGTGCAGCACACTCT+AGG | + | chr8.3:68545635-68545654 | MS.gene051000:intron | 55.0% | |
| CCAGAGTAAGAGGGCTAGGA+GGG | - | chr8.3:68546104-68546123 | None:intergenic | 55.0% | |
| GTAGCGCCTGATAACCTACG+TGG | - | chr8.3:68544386-68544405 | None:intergenic | 55.0% | |
| GTAGGTTATCAGGCGCTACG+AGG | + | chr8.3:68544387-68544406 | MS.gene051000:intron | 55.0% | |
| TGCTAGAGGATCAAGCCCGA+TGG | - | chr8.3:68546888-68546907 | None:intergenic | 55.0% | |
| TTGGCCAGAGTAAGAGGGCT+AGG | - | chr8.3:68546108-68546127 | None:intergenic | 55.0% | |
| CCCTCCTAGCCCTCTTACTC+TGG | + | chr8.3:68546101-68546120 | MS.gene051000:CDS | 60.0% | |
| GCCAGAGTAAGAGGGCTAGG+AGG | - | chr8.3:68546105-68546124 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68541664 | 68547051 | 68541664 | ID=MS.gene051000 |
| chr8.3 | mRNA | 68541664 | 68547051 | 68541664 | ID=MS.gene051000.t1;Parent=MS.gene051000 |
| chr8.3 | exon | 68541664 | 68541783 | 68541664 | ID=MS.gene051000.t1.exon1;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68541664 | 68541783 | 68541664 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68542034 | 68542099 | 68542034 | ID=MS.gene051000.t1.exon2;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68542034 | 68542099 | 68542034 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68542616 | 68542794 | 68542616 | ID=MS.gene051000.t1.exon3;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68542616 | 68542794 | 68542616 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68543724 | 68543859 | 68543724 | ID=MS.gene051000.t1.exon4;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68543724 | 68543859 | 68543724 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68544391 | 68544487 | 68544391 | ID=MS.gene051000.t1.exon5;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68544391 | 68544487 | 68544391 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68544738 | 68544797 | 68544738 | ID=MS.gene051000.t1.exon6;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68544738 | 68544797 | 68544738 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68544883 | 68544983 | 68544883 | ID=MS.gene051000.t1.exon7;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68544883 | 68544983 | 68544883 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68545160 | 68545200 | 68545160 | ID=MS.gene051000.t1.exon8;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68545160 | 68545200 | 68545160 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68545289 | 68545346 | 68545289 | ID=MS.gene051000.t1.exon9;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68545289 | 68545346 | 68545289 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68545501 | 68545575 | 68545501 | ID=MS.gene051000.t1.exon10;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68545501 | 68545575 | 68545501 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68545647 | 68545804 | 68545647 | ID=MS.gene051000.t1.exon11;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68545647 | 68545804 | 68545647 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68546078 | 68546344 | 68546078 | ID=MS.gene051000.t1.exon12;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68546078 | 68546344 | 68546078 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| chr8.3 | exon | 68546802 | 68547051 | 68546802 | ID=MS.gene051000.t1.exon13;Parent=MS.gene051000.t1 |
| chr8.3 | CDS | 68546802 | 68547051 | 68546802 | ID=cds.MS.gene051000.t1;Parent=MS.gene051000.t1 |
| Gene Sequence |
| Protein sequence |
