Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31466.t1 | XP_013465101.1 | 95.7 | 737 | 32 | 0 | 1 | 737 | 1 | 737 | 0.00E+00 | 1281.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31466.t1 | Q94KI8 | 66.5 | 737 | 238 | 5 | 2 | 737 | 3 | 731 | 2.5e-255 | 882.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31466.t1 | A0A072VBZ7 | 95.7 | 737 | 32 | 0 | 1 | 737 | 1 | 737 | 0.0e+00 | 1281.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene31466 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene04919 | MS.gene31466 | 0.809643 | 1.71E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene31466 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene31466 | 0.808617 | 2.84E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene31466 | 0.802808 | 4.71E-49 | -1.69E-46 |
| MS.gene049744 | MS.gene31466 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene31466 | 0.83324 | 5.97E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene31466 | 0.82998 | 3.80E-55 | -1.69E-46 |
| MS.gene050213 | MS.gene31466 | 0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene31466 | 0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene31466 | 0.861808 | 7.91E-64 | -1.69E-46 |
| MS.gene050551 | MS.gene31466 | 0.848864 | 4.67E-60 | -1.69E-46 |
| MS.gene050646 | MS.gene31466 | 0.880903 | 3.74E-70 | -1.69E-46 |
| MS.gene050654 | MS.gene31466 | 0.833938 | 4.00E-56 | -1.69E-46 |
| MS.gene051043 | MS.gene31466 | 0.833033 | 6.73E-56 | -1.69E-46 |
| MS.gene051209 | MS.gene31466 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene31466 | 0.802866 | 4.58E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene31466 | 0.815748 | 7.89E-52 | -1.69E-46 |
| MS.gene051381 | MS.gene31466 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene31466 | 0.839531 | 1.50E-57 | -1.69E-46 |
| MS.gene052036 | MS.gene31466 | 0.808846 | 2.53E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene31466 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene052168 | MS.gene31466 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene052239 | MS.gene31466 | -0.813399 | 2.61E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene31466 | -0.824932 | 6.17E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene31466 | 0.861912 | 7.35E-64 | -1.69E-46 |
| MS.gene052335 | MS.gene31466 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene31466 | 0.802294 | 6.01E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene31466 | 0.838026 | 3.67E-57 | -1.69E-46 |
| MS.gene052514 | MS.gene31466 | 0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene31466 | 0.869383 | 3.23E-66 | -1.69E-46 |
| MS.gene052776 | MS.gene31466 | 0.801049 | 1.08E-48 | -1.69E-46 |
| MS.gene052932 | MS.gene31466 | 0.816612 | 5.06E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene31466 | 0.840903 | 6.57E-58 | -1.69E-46 |
| MS.gene053143 | MS.gene31466 | 0.856016 | 4.28E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene31466 | 0.803333 | 3.66E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene31466 | 0.820825 | 5.59E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene31466 | 0.845854 | 3.13E-59 | -1.69E-46 |
| MS.gene054709 | MS.gene31466 | 0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene054824 | MS.gene31466 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene31466 | 0.838708 | 2.45E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene31466 | 0.839869 | 1.22E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene31466 | 0.819383 | 1.20E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene31466 | 0.832957 | 7.03E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene31466 | 0.817468 | 3.25E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene31466 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene31466 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene31466 | 0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene31466 | 0.827693 | 1.36E-54 | -1.69E-46 |
| MS.gene056507 | MS.gene31466 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene056519 | MS.gene31466 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene31466 | 0.827267 | 1.72E-54 | -1.69E-46 |
| MS.gene056677 | MS.gene31466 | 0.806717 | 7.18E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene31466 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene31466 | 0.810151 | 1.33E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene31466 | 0.801341 | 9.43E-49 | -1.69E-46 |
| MS.gene057174 | MS.gene31466 | 0.825478 | 4.59E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene31466 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene31466 | 0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene31466 | 0.828809 | 7.31E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene31466 | 0.830914 | 2.25E-55 | -1.69E-46 |
| MS.gene059778 | MS.gene31466 | 0.84817 | 7.27E-60 | -1.69E-46 |
| MS.gene059965 | MS.gene31466 | 0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene31466 | 0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene060785 | MS.gene31466 | 0.831124 | 1.99E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene31466 | 0.835957 | 1.24E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene31466 | 0.814895 | 1.22E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene31466 | 0.825058 | 5.76E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene31466 | 0.886478 | 3.30E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31466 | MS.gene051000 | PPI |
| MS.gene25021 | MS.gene31466 | PPI |
| MS.gene31466 | MS.gene08474 | PPI |
| MS.gene31466 | MS.gene81058 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31466.t1 | MTR_2g090380 | 98.100 | 737 | 14 | 0 | 1 | 737 | 1 | 737 | 0.0 | 1475 |
| MS.gene31466.t1 | MTR_2g090380 | 98.129 | 695 | 13 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1388 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31466.t1 | AT4G03560 | 66.396 | 738 | 240 | 5 | 1 | 737 | 1 | 731 | 0.0 | 1021 |
Find 145 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCTCCAATGAAGAATT+TGG | 0.107727 | 2.4:-10287357 | MS.gene31466:CDS |
| TGCTAAGCATTCATACTTTC+TGG | 0.168809 | 2.4:-10294869 | MS.gene31466:CDS |
| CGTTCTTACTTTGACTATTT+AGG | 0.212321 | 2.4:-10287038 | MS.gene31466:CDS |
| AACCCAAACATCTGGATTAT+TGG | 0.252156 | 2.4:+10291833 | None:intergenic |
| CATACCTTCAATAAATTAAT+AGG | 0.253860 | 2.4:+10294807 | None:intergenic |
| TGACACATACTTAAATATAT+TGG | 0.274262 | 2.4:-10292160 | MS.gene31466:intron |
| TGGTATACCTGAGCAACTTC+TGG | 0.274322 | 2.4:-10295987 | MS.gene31466:CDS |
| AGGTCTGTCGCTTCCAAATC+TGG | 0.277776 | 2.4:+10282743 | None:intergenic |
| TGCTAGTCTCGGATGGAGTA+TGG | 0.279631 | 2.4:-10282425 | MS.gene31466:CDS |
| CAGAGCTATAAGGATTTAAC+TGG | 0.282577 | 2.4:-10281290 | MS.gene31466:CDS |
| ATACTAAAGGTTTATTCATA+TGG | 0.292444 | 2.4:-10284689 | MS.gene31466:CDS |
| TCTCTCGAATTGCAGGCTTT+GGG | 0.299078 | 2.4:-10291981 | MS.gene31466:intron |
| CTTTGTTCTTATACTGAATC+TGG | 0.307781 | 2.4:-10286943 | MS.gene31466:CDS |
| TACAAACCTCCAGGAAATTC+AGG | 0.314181 | 2.4:+10295873 | None:intergenic |
| TAGGACTTCTCCAATATATA+CGG | 0.319250 | 2.4:+10294826 | None:intergenic |
| AACTTACCACATCCTCCTTC+TGG | 0.319467 | 2.4:+10287140 | None:intergenic |
| GATCTTGAGGCAGCAGAAAT+TGG | 0.323436 | 2.4:-10280843 | MS.gene31466:CDS |
| TTCGTTCTGTTTGTGCTGAT+TGG | 0.325042 | 2.4:-10291669 | MS.gene31466:CDS |
| CAGCCAATAATCCAGATGTT+TGG | 0.343726 | 2.4:-10291836 | MS.gene31466:CDS |
| TCAACAAAGATCAATGTATT+AGG | 0.343974 | 2.4:-10289604 | MS.gene31466:CDS |
| TATCAACCCAAATTCTTCAT+TGG | 0.351728 | 2.4:+10287350 | None:intergenic |
| AAAAGAACAACTCTGATATA+TGG | 0.352301 | 2.4:+10293828 | None:intergenic |
| CATATGGATTCGAAAACTAT+TGG | 0.353852 | 2.4:-10284673 | MS.gene31466:CDS |
| TAATGCTGGAAACCCAGATT+TGG | 0.358617 | 2.4:-10282756 | MS.gene31466:CDS |
| ATGAAGGGTCCCGTATATAT+TGG | 0.360725 | 2.4:-10294836 | MS.gene31466:CDS |
| AAATCTCCAATGAAGAATTT+GGG | 0.371003 | 2.4:-10287356 | MS.gene31466:CDS |
| TCATATGCTGAGTGCTGAGC+TGG | 0.377950 | 2.4:-10278718 | MS.gene31466:CDS |
| AATAGTGTCACCATTCCATT+TGG | 0.378266 | 2.4:+10282453 | None:intergenic |
| AGCCAATAATCCAGATGTTT+GGG | 0.378563 | 2.4:-10291835 | MS.gene31466:CDS |
| TTTGTAAAGAGCACCATGTT+TGG | 0.387081 | 2.4:-10286978 | MS.gene31466:CDS |
| TATCCAAGGCGGCGAGCTCT+TGG | 0.391587 | 2.4:-10279161 | MS.gene31466:CDS |
| AATTTCAATGATTATCCAAA+TGG | 0.397347 | 2.4:-10282468 | MS.gene31466:CDS |
| ATATACTCAGATTTATGTAT+TGG | 0.399145 | 2.4:+10278680 | None:intergenic |
| CAAGTGGTTGAGTTCACTTT+TGG | 0.401002 | 2.4:-10284983 | MS.gene31466:intron |
| TCTGATAGTCCTGAATTTCC+TGG | 0.401216 | 2.4:-10295882 | MS.gene31466:CDS |
| TTATTGCTCACTTGGTGTCC+AGG | 0.404636 | 2.4:-10282943 | MS.gene31466:intron |
| AATACACAAGATGCAAAATA+TGG | 0.406409 | 2.4:+10282965 | None:intergenic |
| AGGATTTAACTGGAACTTCC+TGG | 0.414166 | 2.4:-10281280 | MS.gene31466:CDS |
| AAAAGTAATACTCTCTATCT+AGG | 0.415878 | 2.4:+10295701 | None:intergenic |
| CATTCTGCAGCAGTTAGATA+TGG | 0.416054 | 2.4:+10295667 | None:intergenic |
| TGCAGAATGTATTATTTATG+AGG | 0.421825 | 2.4:-10295653 | MS.gene31466:intron |
| ATATGCTACAGAAACCTCTA+TGG | 0.426517 | 2.4:-10295750 | MS.gene31466:intron |
| GAAACTGTCGTCATCGTGGC+TGG | 0.433664 | 2.4:-10292189 | MS.gene31466:CDS |
| AGTTATCCTTGCTGATATGC+TGG | 0.434668 | 2.4:-10293907 | MS.gene31466:CDS |
| TTCTGGCCGTTATCATATGA+AGG | 0.435306 | 2.4:-10294852 | MS.gene31466:CDS |
| AAAGGCTTTCAATCTCTTTG+AGG | 0.436125 | 2.4:+10286998 | None:intergenic |
| TACCGTTGTCTCAATAATTA+CGG | 0.436873 | 2.4:+10286917 | None:intergenic |
| CAAAATATGGTCCCGAGGTA+TGG | 0.440005 | 2.4:+10282978 | None:intergenic |
| TTTGGTGGAATAGTTAATGC+TGG | 0.445451 | 2.4:-10282770 | MS.gene31466:CDS |
| TTGTGTATTTATTGCTCACT+TGG | 0.445694 | 2.4:-10282951 | MS.gene31466:CDS |
| CATTCTCCATTTGTGAAAAG+TGG | 0.446899 | 2.4:+10284076 | None:intergenic |
| CTGATATAATGTTGTACTAA+AGG | 0.447292 | 2.4:+10291878 | None:intergenic |
| CCGAGGTATGGCATCAAACT+TGG | 0.451675 | 2.4:+10282990 | None:intergenic |
| TGGAGTATGGGATGAATTGA+TGG | 0.452448 | 2.4:-10282412 | MS.gene31466:CDS |
| GTCTCAATATAGGAAGTTGC+GGG | 0.454707 | 2.4:-10279191 | MS.gene31466:intron |
| CAAGAATGTTGAGATTGATA+AGG | 0.458845 | 2.4:-10283070 | MS.gene31466:CDS |
| TGGGTTGATATTTGATGAGC+TGG | 0.461926 | 2.4:-10287337 | MS.gene31466:CDS |
| ATCCAAGGCGGCGAGCTCTT+GGG | 0.462316 | 2.4:-10279160 | MS.gene31466:intron |
| TCATACTTACATGTGTATCT+AGG | 0.466207 | 2.4:+10291351 | None:intergenic |
| ATCTCTTTGAGGTGGGTGAA+TGG | 0.466868 | 2.4:+10287009 | None:intergenic |
| TATGCAGGAACCCAAACATC+TGG | 0.467390 | 2.4:+10291825 | None:intergenic |
| AGCCGCCGCTCTCATCGATC+TGG | 0.472849 | 2.4:-10297853 | MS.gene31466:intron |
| GGCTTTCAATCTCTTTGAGG+TGG | 0.475031 | 2.4:+10287001 | None:intergenic |
| CTCTCGAATTGCAGGCTTTG+GGG | 0.478818 | 2.4:-10291980 | MS.gene31466:intron |
| TACCCAAGAGCTCGCCGCCT+TGG | 0.491057 | 2.4:+10279158 | None:intergenic |
| GGTCTGTCGCTTCCAAATCT+GGG | 0.492749 | 2.4:+10282744 | None:intergenic |
| TTCAATTTGCTAGTCTCGGA+TGG | 0.492860 | 2.4:-10282432 | MS.gene31466:CDS |
| GAAGAAGAGCATCAACCCTC+TGG | 0.497067 | 2.4:+10278742 | None:intergenic |
| AAGTCCTATTAATTTATTGA+AGG | 0.504646 | 2.4:-10294811 | MS.gene31466:intron |
| TCACTAAATTCGATCTCCTC+TGG | 0.506461 | 2.4:-10295922 | MS.gene31466:CDS |
| TTTGTGATCACAGTGACAAT+TGG | 0.512897 | 2.4:-10284626 | MS.gene31466:intron |
| TAAAACCCTTACTTGTATGC+AGG | 0.514020 | 2.4:+10291810 | None:intergenic |
| TGTAAAACAAGTTTCTGAGA+TGG | 0.518234 | 2.4:-10291414 | MS.gene31466:CDS |
| ACTATTCAATTTGCTAGTCT+CGG | 0.518503 | 2.4:-10282436 | MS.gene31466:CDS |
| TGTGATGGAAATGATACTAA+AGG | 0.519225 | 2.4:-10284702 | MS.gene31466:CDS |
| GATGAATCCAGAAGTTGCTC+AGG | 0.520269 | 2.4:+10295980 | None:intergenic |
| TCGTACGAGAAGAGCTATGT+TGG | 0.527493 | 2.4:-10291390 | MS.gene31466:CDS |
| CTGCTTTCGCCTCGTAGCAA+AGG | 0.529724 | 2.4:+10297951 | None:intergenic |
| AAAAGTGGCAGACCATCATC+AGG | 0.532876 | 2.4:+10284091 | None:intergenic |
| AAGATTCCAGAAGGAGGATG+TGG | 0.535794 | 2.4:-10287146 | MS.gene31466:intron |
| CGGGACCCTTCATATGATAA+CGG | 0.538106 | 2.4:+10294846 | None:intergenic |
| TCGAGGAGGTGAACAAGTAC+AGG | 0.539275 | 2.4:-10289577 | MS.gene31466:intron |
| GGTAGAAAATCAAAAGCCAC+TGG | 0.539752 | 2.4:+10293864 | None:intergenic |
| TGCATTACACAGGCTGAAGA+TGG | 0.540846 | 2.4:-10296013 | MS.gene31466:intron |
| GCTTTCAATCTCTTTGAGGT+GGG | 0.544244 | 2.4:+10287002 | None:intergenic |
| ATCTCAACATTCTTGCAAGA+AGG | 0.546221 | 2.4:+10283078 | None:intergenic |
| GGATGACACTCATGATGTAA+AGG | 0.547002 | 2.4:-10287316 | MS.gene31466:intron |
| CAATGATTATCCAAATGGAA+TGG | 0.547433 | 2.4:-10282463 | MS.gene31466:CDS |
| AATGAAATATACATAGGTCC+AGG | 0.547756 | 2.4:+10281262 | None:intergenic |
| TTCGAAAACTATTGGCGGGA+TGG | 0.551264 | 2.4:-10284665 | MS.gene31466:CDS |
| AGAAAGTTGCCACAAAACTT+CGG | 0.552406 | 2.4:+10283024 | None:intergenic |
| TACAGGGTGGATATATGTGA+TGG | 0.552962 | 2.4:-10284717 | MS.gene31466:intron |
| AAAATCTATAGTTTCTCCAA+TGG | 0.554406 | 2.4:+10284120 | None:intergenic |
| GCTAGTCTCGGATGGAGTAT+GGG | 0.557602 | 2.4:-10282424 | MS.gene31466:CDS |
| GGAATCGCTTAACATACATC+AGG | 0.557722 | 2.4:+10283045 | None:intergenic |
| ATGGATTCGAAAACTATTGG+CGG | 0.558501 | 2.4:-10284670 | MS.gene31466:CDS |
| CTTTGCTGAAATAGATCTTG+AGG | 0.558638 | 2.4:-10280856 | MS.gene31466:CDS |
| TGGATTCGAAAACTATTGGC+GGG | 0.559918 | 2.4:-10284669 | MS.gene31466:CDS |
| TGCTCTCTATATGTCTCCAG+TGG | 0.562017 | 2.4:-10293880 | MS.gene31466:CDS |
| CAAGTTTGATGCCATACCTC+GGG | 0.565671 | 2.4:-10282989 | MS.gene31466:CDS |
| TGTCTCAATATAGGAAGTTG+CGG | 0.568103 | 2.4:-10279192 | MS.gene31466:intron |
| CGCAGCGATGCTATCACCTA+CGG | 0.571895 | 2.4:-10297891 | MS.gene31466:CDS |
| AACAAAATCACGAAGCCAGA+GGG | 0.578384 | 2.4:-10278757 | MS.gene31466:CDS |
| TGCTTTAAGATTCCAGAAGG+AGG | 0.583288 | 2.4:-10287152 | MS.gene31466:CDS |
| TCTATCTAGGCAAGAATGTG+TGG | 0.586511 | 2.4:+10295714 | None:intergenic |
| TCAATGTATTAGGCTATTCG+AGG | 0.587830 | 2.4:-10289594 | MS.gene31466:CDS |
| CATTGCTTTAAGATTCCAGA+AGG | 0.591270 | 2.4:-10287155 | MS.gene31466:CDS |
| AGGACTTCTCCAATATATAC+GGG | 0.591654 | 2.4:+10294827 | None:intergenic |
| TCTGGCCGTTATCATATGAA+GGG | 0.592037 | 2.4:-10294851 | MS.gene31466:CDS |
| CTTCTGGAATCTTAAAGCAA+TGG | 0.594442 | 2.4:+10287156 | None:intergenic |
| TTACGATAGTTTCAAGAGTG+AGG | 0.596644 | 2.4:-10291610 | MS.gene31466:intron |
| GAAGCTAATGAAATATACAT+AGG | 0.596872 | 2.4:+10281256 | None:intergenic |
| AGGTGATAGCATCGCTGCGA+CGG | 0.603014 | 2.4:+10297895 | None:intergenic |
| TTTCTCGTAGTTAGAACCGT+AGG | 0.605338 | 2.4:+10297875 | None:intergenic |
| TCAACATTCTTGCAAGAAGG+AGG | 0.608151 | 2.4:+10283081 | None:intergenic |
| ACACAGGCTGAAGATGGTGT+TGG | 0.611124 | 2.4:-10296007 | MS.gene31466:intron |
| ATATATGGTGCAATTCTGAA+AGG | 0.611657 | 2.4:+10293843 | None:intergenic |
| TGCCGTAATTATTGAGACAA+CGG | 0.612229 | 2.4:-10286919 | MS.gene31466:intron |
| CTACGAGGCGAAAGCAGTGG+CGG | 0.612864 | 2.4:-10297945 | MS.gene31466:CDS |
| CCAAGTTTGATGCCATACCT+CGG | 0.613406 | 2.4:-10282990 | MS.gene31466:CDS |
| CATATGCTGAGTGCTGAGCT+GGG | 0.614737 | 2.4:-10278717 | MS.gene31466:CDS |
| GAGGCAGCAGAAATTGGTGA+TGG | 0.618998 | 2.4:-10280837 | MS.gene31466:CDS |
| GATAGTCCTGAATTTCCTGG+AGG | 0.621083 | 2.4:-10295879 | MS.gene31466:intron |
| TTGCTACGAGGCGAAAGCAG+TGG | 0.623774 | 2.4:-10297948 | MS.gene31466:CDS |
| CTTGAAACTATCGTAAACAA+CGG | 0.624926 | 2.4:+10291617 | None:intergenic |
| AAACATGGTGCTCTTTACAA+AGG | 0.628908 | 2.4:+10286980 | None:intergenic |
| CAGATTCAGTATAAGAACAA+AGG | 0.629070 | 2.4:+10286944 | None:intergenic |
| AATTGGTGATGGAAATGACA+AGG | 0.630414 | 2.4:-10280826 | MS.gene31466:intron |
| CAAAATAACTAAGAGACCAG+AGG | 0.639575 | 2.4:+10295906 | None:intergenic |
| GGTTTAAGAAACCGTTCGCG+AGG | 0.643206 | 2.4:-10297924 | MS.gene31466:CDS |
| AAGGATAACTAACAGACAGA+AGG | 0.645496 | 2.4:+10293920 | None:intergenic |
| ACGAGAAACTGTCGTCATCG+TGG | 0.649872 | 2.4:-10292193 | MS.gene31466:CDS |
| GAACAAAATCACGAAGCCAG+AGG | 0.652271 | 2.4:-10278758 | MS.gene31466:CDS |
| GAGGATACTCATTAGCAGCA+AGG | 0.659265 | 2.4:+10282723 | None:intergenic |
| CATAAACCAGCATATCAGCA+AGG | 0.664232 | 2.4:+10293901 | None:intergenic |
| GGTCACTATGTATCCAAACA+TGG | 0.670852 | 2.4:+10286965 | None:intergenic |
| TTGCGGGAGAAAGATATCCA+AGG | 0.673284 | 2.4:-10279175 | MS.gene31466:CDS |
| AACCAGATCGATGAGAGCGG+CGG | 0.675805 | 2.4:+10297851 | None:intergenic |
| GACGGACTATACCTCGCGAA+CGG | 0.678045 | 2.4:+10297913 | None:intergenic |
| ATGTATTAGGCTATTCGAGG+AGG | 0.681914 | 2.4:-10289591 | MS.gene31466:CDS |
| AGTATGGGATGAATTGATGG+AGG | 0.682882 | 2.4:-10282409 | MS.gene31466:intron |
| ACGAACCAGATCGATGAGAG+CGG | 0.684232 | 2.4:+10297848 | None:intergenic |
| AGATGCAAAATATGGTCCCG+AGG | 0.689742 | 2.4:+10282973 | None:intergenic |
| GAGATGGAGCCTTTGCTACG+AGG | 0.697248 | 2.4:-10297960 | MS.gene31466:CDS |
| CGGGAGAAAGATATCCAAGG+CGG | 0.775648 | 2.4:-10279172 | MS.gene31466:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 10278692 | 10297979 | 10278692 | ID=MS.gene31466 |
| chr2.4 | mRNA | 10278692 | 10297979 | 10278692 | ID=MS.gene31466.t1;Parent=MS.gene31466 |
| chr2.4 | exon | 10297854 | 10297979 | 10297854 | ID=MS.gene31466.t1.exon1;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10297854 | 10297979 | 10297854 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10295880 | 10296023 | 10295880 | ID=MS.gene31466.t1.exon2;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10295880 | 10296023 | 10295880 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10295654 | 10295761 | 10295654 | ID=MS.gene31466.t1.exon3;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10295654 | 10295761 | 10295654 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10294812 | 10294907 | 10294812 | ID=MS.gene31466.t1.exon4;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10294812 | 10294907 | 10294812 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10293813 | 10293943 | 10293813 | ID=MS.gene31466.t1.exon5;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10293813 | 10293943 | 10293813 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10292161 | 10292221 | 10292161 | ID=MS.gene31466.t1.exon6;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10292161 | 10292221 | 10292161 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10291822 | 10291988 | 10291822 | ID=MS.gene31466.t1.exon7;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10291822 | 10291988 | 10291822 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10291611 | 10291716 | 10291611 | ID=MS.gene31466.t1.exon8;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10291611 | 10291716 | 10291611 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10291361 | 10291438 | 10291361 | ID=MS.gene31466.t1.exon9;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10291361 | 10291438 | 10291361 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10289578 | 10289639 | 10289578 | ID=MS.gene31466.t1.exon10;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10289578 | 10289639 | 10289578 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10287317 | 10287389 | 10287317 | ID=MS.gene31466.t1.exon11;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10287317 | 10287389 | 10287317 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10287147 | 10287212 | 10287147 | ID=MS.gene31466.t1.exon12;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10287147 | 10287212 | 10287147 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10286920 | 10287060 | 10286920 | ID=MS.gene31466.t1.exon13;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10286920 | 10287060 | 10286920 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10284984 | 10285041 | 10284984 | ID=MS.gene31466.t1.exon14;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10284984 | 10285041 | 10284984 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10284627 | 10284734 | 10284627 | ID=MS.gene31466.t1.exon15;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10284627 | 10284734 | 10284627 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10284076 | 10284142 | 10284076 | ID=MS.gene31466.t1.exon16;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10284076 | 10284142 | 10284076 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10282944 | 10283112 | 10282944 | ID=MS.gene31466.t1.exon17;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10282944 | 10283112 | 10282944 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10282731 | 10282795 | 10282731 | ID=MS.gene31466.t1.exon18;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10282731 | 10282795 | 10282731 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10282410 | 10282503 | 10282410 | ID=MS.gene31466.t1.exon19;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10282410 | 10282503 | 10282410 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10281223 | 10281309 | 10281223 | ID=MS.gene31466.t1.exon20;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10281223 | 10281309 | 10281223 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10280827 | 10280904 | 10280827 | ID=MS.gene31466.t1.exon21;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10280827 | 10280904 | 10280827 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10279161 | 10279201 | 10279161 | ID=MS.gene31466.t1.exon22;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10279161 | 10279201 | 10279161 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| chr2.4 | exon | 10278692 | 10278779 | 10278692 | ID=MS.gene31466.t1.exon23;Parent=MS.gene31466.t1 |
| chr2.4 | CDS | 10278692 | 10278779 | 10278692 | ID=cds.MS.gene31466.t1;Parent=MS.gene31466.t1 |
| Gene Sequence |
| Protein sequence |
