Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071660.t1 | XP_024626154.1 | 92.2 | 666 | 16 | 1 | 8 | 637 | 191 | 856 | 0.00E+00 | 1250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071660.t1 | Q9LUW0 | 68.2 | 666 | 176 | 1 | 8 | 637 | 221 | 886 | 9.1e-278 | 957.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071660.t1 | G7ID71 | 92.2 | 666 | 16 | 1 | 8 | 637 | 191 | 856 | 0.0e+00 | 1250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene071660 | 0.813049 | 3.12E-51 | -1.69E-46 |
| MS.gene051091 | MS.gene071660 | 0.842597 | 2.35E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene071660 | 0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene071660 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene071660 | 0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene056525 | MS.gene071660 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene060038 | MS.gene071660 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene071660 | -0.807736 | 4.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071660.t1 | MTR_1g104650 | 92.192 | 666 | 16 | 1 | 8 | 637 | 191 | 856 | 0.0 | 1262 |
| MS.gene071660.t1 | MTR_7g113410 | 64.414 | 666 | 196 | 3 | 8 | 637 | 207 | 867 | 0.0 | 909 |
| MS.gene071660.t1 | MTR_1g083020 | 63.363 | 666 | 203 | 3 | 8 | 637 | 198 | 858 | 0.0 | 883 |
| MS.gene071660.t1 | MTR_8g018420 | 60.902 | 665 | 216 | 5 | 8 | 637 | 201 | 856 | 0.0 | 843 |
| MS.gene071660.t1 | MTR_8g018735 | 58.797 | 665 | 228 | 5 | 8 | 637 | 212 | 865 | 0.0 | 812 |
| MS.gene071660.t1 | MTR_2g099560 | 58.434 | 664 | 231 | 5 | 8 | 637 | 211 | 863 | 0.0 | 811 |
| MS.gene071660.t1 | MTR_8g018730 | 58.797 | 665 | 228 | 5 | 8 | 637 | 211 | 864 | 0.0 | 810 |
| MS.gene071660.t1 | MTR_2g099570 | 57.444 | 665 | 239 | 4 | 8 | 637 | 206 | 861 | 0.0 | 801 |
| MS.gene071660.t1 | MTR_8g018730 | 59.690 | 645 | 224 | 5 | 8 | 637 | 211 | 834 | 0.0 | 801 |
| MS.gene071660.t1 | MTR_8g018570 | 57.444 | 665 | 239 | 4 | 8 | 637 | 215 | 870 | 0.0 | 801 |
| MS.gene071660.t1 | MTR_8g018520 | 56.842 | 665 | 243 | 4 | 8 | 637 | 213 | 868 | 0.0 | 796 |
| MS.gene071660.t1 | MTR_8g018430 | 57.594 | 665 | 238 | 5 | 8 | 637 | 206 | 861 | 0.0 | 793 |
| MS.gene071660.t1 | MTR_8g020990 | 56.842 | 665 | 243 | 4 | 8 | 637 | 213 | 868 | 0.0 | 791 |
| MS.gene071660.t1 | MTR_3g081130 | 56.798 | 662 | 246 | 4 | 8 | 637 | 205 | 858 | 0.0 | 790 |
| MS.gene071660.t1 | MTR_5g024020 | 57.594 | 665 | 236 | 6 | 8 | 637 | 214 | 867 | 0.0 | 790 |
| MS.gene071660.t1 | MTR_3g081130 | 56.798 | 662 | 246 | 4 | 8 | 637 | 133 | 786 | 0.0 | 788 |
| MS.gene071660.t1 | MTR_8g018690 | 56.970 | 660 | 245 | 4 | 8 | 637 | 215 | 865 | 0.0 | 783 |
| MS.gene071660.t1 | MTR_8g018690 | 56.970 | 660 | 245 | 4 | 8 | 637 | 195 | 845 | 0.0 | 782 |
| MS.gene071660.t1 | MTR_8g018510 | 56.757 | 666 | 242 | 6 | 8 | 637 | 214 | 869 | 0.0 | 780 |
| MS.gene071660.t1 | MTR_8g018550 | 57.895 | 665 | 236 | 4 | 8 | 637 | 213 | 868 | 0.0 | 780 |
| MS.gene071660.t1 | MTR_8g018450 | 57.121 | 639 | 256 | 6 | 8 | 637 | 199 | 828 | 0.0 | 758 |
| MS.gene071660.t1 | MTR_8g018730 | 63.842 | 531 | 186 | 2 | 107 | 637 | 60 | 584 | 0.0 | 733 |
| MS.gene071660.t1 | MTR_5g024020 | 54.737 | 665 | 219 | 7 | 8 | 637 | 214 | 831 | 0.0 | 731 |
| MS.gene071660.t1 | MTR_8g018650 | 52.812 | 640 | 265 | 8 | 8 | 637 | 195 | 807 | 0.0 | 695 |
| MS.gene071660.t1 | MTR_8g018620 | 52.418 | 641 | 266 | 10 | 8 | 637 | 195 | 807 | 0.0 | 689 |
| MS.gene071660.t1 | MTR_8g018590 | 52.207 | 657 | 272 | 10 | 8 | 637 | 182 | 823 | 0.0 | 669 |
| MS.gene071660.t1 | MTR_8g020970 | 46.257 | 668 | 312 | 9 | 8 | 636 | 267 | 926 | 0.0 | 604 |
| MS.gene071660.t1 | MTR_8g080230 | 45.765 | 673 | 308 | 12 | 8 | 637 | 258 | 916 | 0.0 | 587 |
| MS.gene071660.t1 | MTR_4g066170 | 44.776 | 670 | 318 | 11 | 8 | 637 | 249 | 906 | 0.0 | 574 |
| MS.gene071660.t1 | MTR_3g479460 | 44.296 | 675 | 316 | 10 | 8 | 637 | 244 | 903 | 0.0 | 568 |
| MS.gene071660.t1 | MTR_3g079450 | 44.113 | 671 | 323 | 11 | 8 | 637 | 243 | 902 | 0.0 | 557 |
| MS.gene071660.t1 | MTR_8g011340 | 43.492 | 630 | 305 | 9 | 8 | 595 | 210 | 830 | 0.0 | 543 |
| MS.gene071660.t1 | MTR_4g088810 | 41.896 | 654 | 337 | 9 | 8 | 636 | 259 | 894 | 1.10e-180 | 535 |
| MS.gene071660.t1 | MTR_8g021020 | 59.658 | 409 | 155 | 3 | 234 | 637 | 28 | 431 | 1.50e-180 | 518 |
| MS.gene071660.t1 | MTR_3g079420 | 44.940 | 672 | 317 | 12 | 8 | 637 | 205 | 865 | 3.23e-178 | 528 |
| MS.gene071660.t1 | MTR_6g452500 | 42.244 | 606 | 296 | 10 | 52 | 615 | 12 | 605 | 6.17e-167 | 491 |
| MS.gene071660.t1 | MTR_8g018735 | 56.829 | 410 | 136 | 4 | 8 | 382 | 212 | 615 | 2.63e-159 | 472 |
| MS.gene071660.t1 | MTR_8g020970 | 44.552 | 413 | 188 | 7 | 8 | 382 | 267 | 676 | 3.04e-111 | 349 |
| MS.gene071660.t1 | MTR_3g079450 | 42.271 | 414 | 194 | 9 | 8 | 382 | 243 | 650 | 2.88e-97 | 312 |
| MS.gene071660.t1 | MTR_7g012030 | 57.983 | 119 | 49 | 1 | 285 | 402 | 85 | 203 | 4.36e-40 | 146 |
| MS.gene071660.t1 | MTR_8g463810 | 35.628 | 247 | 87 | 6 | 173 | 418 | 182 | 357 | 4.34e-35 | 137 |
| MS.gene071660.t1 | MTR_6g046330 | 52.308 | 130 | 50 | 2 | 285 | 402 | 75 | 204 | 6.22e-35 | 135 |
| MS.gene071660.t1 | MTR_3g107560 | 32.759 | 232 | 88 | 8 | 410 | 637 | 7 | 174 | 3.79e-23 | 97.4 |
| MS.gene071660.t1 | MTR_2g005920 | 63.333 | 60 | 21 | 1 | 506 | 565 | 58 | 116 | 1.06e-18 | 82.8 |
| MS.gene071660.t1 | MTR_7g113408 | 59.322 | 59 | 24 | 0 | 528 | 586 | 11 | 69 | 3.38e-17 | 77.4 |
| MS.gene071660.t1 | MTR_4g088805 | 36.458 | 96 | 55 | 2 | 542 | 636 | 1 | 91 | 5.91e-12 | 62.4 |
| MS.gene071660.t1 | MTR_5g023990 | 42.647 | 68 | 26 | 1 | 418 | 485 | 145 | 199 | 9.88e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071660.t1 | AT3G22400 | 69.069 | 666 | 170 | 1 | 8 | 637 | 221 | 886 | 0.0 | 990 |
| MS.gene071660.t1 | AT1G55020 | 61.826 | 668 | 208 | 6 | 8 | 637 | 201 | 859 | 0.0 | 862 |
| MS.gene071660.t1 | AT1G17420 | 45.727 | 667 | 316 | 11 | 8 | 637 | 262 | 919 | 0.0 | 588 |
| MS.gene071660.t1 | AT1G72520 | 45.277 | 667 | 320 | 10 | 8 | 637 | 268 | 926 | 0.0 | 583 |
| MS.gene071660.t1 | AT3G45140 | 44.925 | 670 | 314 | 13 | 8 | 637 | 242 | 896 | 0.0 | 557 |
| MS.gene071660.t1 | AT3G45140 | 44.925 | 670 | 314 | 13 | 8 | 637 | 100 | 754 | 0.0 | 555 |
| MS.gene071660.t1 | AT1G67560 | 43.091 | 673 | 329 | 12 | 8 | 637 | 256 | 917 | 0.0 | 539 |
Find 148 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTGAAGCCACACTTTA+AGG | 0.049751 | 1.2:-77725337 | MS.gene071660:CDS |
| TTGCTTGGATGGAACTATTT+TGG | 0.167923 | 1.2:+77725983 | None:intergenic |
| CCAATACCTCTGATTATTCT+AGG | 0.186631 | 1.2:-77724315 | MS.gene071660:CDS |
| CTGTTGATGGATTGGAAATA+TGG | 0.195211 | 1.2:-77724945 | MS.gene071660:CDS |
| AATCATGCACCATTATTATA+TGG | 0.217985 | 1.2:-77724747 | MS.gene071660:CDS |
| CTATTTGTAGCTATTATAAA+TGG | 0.235592 | 1.2:+77725390 | None:intergenic |
| CCGTTTCTGTTCTTCAAACT+TGG | 0.266615 | 1.2:+77724370 | None:intergenic |
| TCAGCATCTGAAGTCCAATT+AGG | 0.270915 | 1.2:+77724469 | None:intergenic |
| GCTCAGTTCCAAACTCTTCT+TGG | 0.275910 | 1.2:-77724559 | MS.gene071660:CDS |
| GAACATAAATGTTTAGATTC+AGG | 0.281536 | 1.2:+77726744 | None:intergenic |
| GACAGACAGTAGACCCTAAT+TGG | 0.281562 | 1.2:-77724483 | MS.gene071660:CDS |
| CACATAGAAAATAGTTTAGA+TGG | 0.286202 | 1.2:-77725958 | MS.gene071660:CDS |
| TGAGGGTCATGGCGACTTAA+AGG | 0.288673 | 1.2:-77724815 | MS.gene071660:CDS |
| GACATTTGTGTCCAGCTTGC+TGG | 0.309840 | 1.2:+77726014 | None:intergenic |
| GATTATGCACGTCCTGTTAT+TGG | 0.313044 | 1.2:-77726936 | MS.gene071660:CDS |
| TGGAGGACCGACGAGGAGTT+TGG | 0.332619 | 1.2:-77726327 | MS.gene071660:CDS |
| TTCTATGTGCTTTGCTTGGA+TGG | 0.334407 | 1.2:+77725972 | None:intergenic |
| CCTAGAATAATCAGAGGTAT+TGG | 0.352991 | 1.2:+77724315 | None:intergenic |
| TGGAGACGGCGAATGATAAC+AGG | 0.375986 | 1.2:+77726279 | None:intergenic |
| CTAGAATAATCAGAGGTATT+GGG | 0.380845 | 1.2:+77724316 | None:intergenic |
| TCGACTGAAGAGGTTTATCT+TGG | 0.381313 | 1.2:-77724505 | MS.gene071660:CDS |
| AGAGAACTTGTTAGGAATGA+TGG | 0.388843 | 1.2:-77726497 | MS.gene071660:CDS |
| TTTGTGTTGCTAACCTGTTT+TGG | 0.389210 | 1.2:+77726860 | None:intergenic |
| TTCACTCAAATCTGTTGCTC+AGG | 0.389795 | 1.2:-77726672 | MS.gene071660:CDS |
| TCCAATCCATCAACAGCAAA+AGG | 0.389933 | 1.2:+77724952 | None:intergenic |
| TTGGGAAACAGAAGGGTATA+AGG | 0.391897 | 1.2:+77724334 | None:intergenic |
| ATGACACACCAAGAAGAGTT+TGG | 0.394806 | 1.2:+77724551 | None:intergenic |
| TATGCTGCTGTGAATGATTC+AGG | 0.400868 | 1.2:-77725539 | MS.gene071660:CDS |
| ATAACAGGACGTGCATAATC+TGG | 0.402270 | 1.2:+77726939 | None:intergenic |
| TCAATTCTAGTCTTCATTTG+TGG | 0.405339 | 1.2:+77724778 | None:intergenic |
| GTTCCAAGAGATGAACAGTT+TGG | 0.412030 | 1.2:-77726725 | MS.gene071660:CDS |
| GTTCTTCCTCGACGTGGATA+AGG | 0.412854 | 1.2:+77726897 | None:intergenic |
| TTTCATGCAGCTGTGAACTT+TGG | 0.414934 | 1.2:-77724712 | MS.gene071660:CDS |
| CCATGAGGGCTATTTGAATC+TGG | 0.424740 | 1.2:+77725000 | None:intergenic |
| CGTTTCTGTTCTTCAAACTT+GGG | 0.424883 | 1.2:+77724371 | None:intergenic |
| GAGTTTATTCTACTTATGTA+TGG | 0.426359 | 1.2:+77725746 | None:intergenic |
| TTTGGAAGAGAAATGCTTGC+TGG | 0.431144 | 1.2:-77726309 | MS.gene071660:CDS |
| GCATAATCTGGACCATCATC+TGG | 0.433208 | 1.2:+77726951 | None:intergenic |
| TGACCAAACTGTTCATCTCT+TGG | 0.434284 | 1.2:+77726722 | None:intergenic |
| CAGCATCTGAAGTCCAATTA+GGG | 0.434509 | 1.2:+77724470 | None:intergenic |
| TTCGGTAGGTAACCTGCATA+AGG | 0.443904 | 1.2:+77724682 | None:intergenic |
| AGTCGTCCACATACCAAAAC+AGG | 0.445120 | 1.2:-77726873 | MS.gene071660:intron |
| AGAAGCCACCCATATAATAA+TGG | 0.446648 | 1.2:+77724738 | None:intergenic |
| AAGCTGGACACAAATGTCTA+TGG | 0.447046 | 1.2:-77726009 | MS.gene071660:CDS |
| CGACTAACCGTTGGACGATT+CGG | 0.451442 | 1.2:+77724664 | None:intergenic |
| TCTAGGGAGGGTGGACTCAC+TGG | 0.452810 | 1.2:-77724298 | MS.gene071660:CDS |
| TACTCTGGTGTACCTTGCTC+AGG | 0.466421 | 1.2:+77724631 | None:intergenic |
| ATCATGCACCATTATTATAT+GGG | 0.471863 | 1.2:-77724746 | MS.gene071660:CDS |
| TTTCCCTGGTAAATTTGCAT+TGG | 0.472021 | 1.2:-77725244 | MS.gene071660:CDS |
| CAAGTTTGAAGAACAGAAAC+GGG | 0.472398 | 1.2:-77724369 | MS.gene071660:CDS |
| GGCTTCAAGAGCTTATGAAT+TGG | 0.474762 | 1.2:+77725348 | None:intergenic |
| ATTTCCAATGCAAATTTACC+AGG | 0.477720 | 1.2:+77725240 | None:intergenic |
| GGAGGGTGGACTCACTGGTA+AGG | 0.484597 | 1.2:-77724293 | MS.gene071660:CDS |
| GACTTCAGATGCTGAACCAT+TGG | 0.484611 | 1.2:-77724461 | MS.gene071660:CDS |
| CTTCTGTTTCTACAAGATGA+TGG | 0.486049 | 1.2:-77725692 | MS.gene071660:CDS |
| TTGGAAGAGAAATGCTTGCT+GGG | 0.486947 | 1.2:-77726308 | MS.gene071660:CDS |
| CTATGCATGCTACAATGACT+TGG | 0.495094 | 1.2:-77726979 | MS.gene071660:CDS |
| TGTTGATGGATTGGAAATAT+GGG | 0.500247 | 1.2:-77724944 | MS.gene071660:CDS |
| TACCTCTTGAGCAGATTAGC+AGG | 0.501513 | 1.2:+77725171 | None:intergenic |
| ATTTCCTCCTGCCAGCAAGC+TGG | 0.504571 | 1.2:-77726025 | MS.gene071660:CDS |
| TATATACCTTTGATCACGTC+AGG | 0.508817 | 1.2:+77726449 | None:intergenic |
| AGGCATACACTTATCAATGC+TGG | 0.509065 | 1.2:-77725288 | MS.gene071660:CDS |
| TTGAGAATAACATCATGAAA+AGG | 0.509337 | 1.2:-77724402 | MS.gene071660:CDS |
| GAGGGTGGACTCACTGGTAA+GGG | 0.511057 | 1.2:-77724292 | MS.gene071660:CDS |
| TATGGGATGCAATTGAAACT+TGG | 0.511065 | 1.2:-77724927 | MS.gene071660:CDS |
| CCAAGTTTGAAGAACAGAAA+CGG | 0.512118 | 1.2:-77724370 | MS.gene071660:CDS |
| TCACATAGAGATCTAAGCTC+TGG | 0.512788 | 1.2:+77726641 | None:intergenic |
| CCTTTGATCACGTCAGGCAC+AGG | 0.514728 | 1.2:+77726455 | None:intergenic |
| TGTTGTTCGCCTTGTGGATG+AGG | 0.514909 | 1.2:+77725635 | None:intergenic |
| TTTGGACAATACCCTTATGC+AGG | 0.516651 | 1.2:-77724694 | MS.gene071660:CDS |
| CAATACCTCTGATTATTCTA+GGG | 0.520220 | 1.2:-77724314 | MS.gene071660:CDS |
| TTTGTGTCCAGCTTGCTGGC+AGG | 0.521766 | 1.2:+77726018 | None:intergenic |
| GCTGCTACTCCTTCATGTGA+TGG | 0.522089 | 1.2:+77725587 | None:intergenic |
| CCAGATTCAAATAGCCCTCA+TGG | 0.529426 | 1.2:-77725000 | MS.gene071660:CDS |
| GTTTCAGATGGATATGCTGT+TGG | 0.534874 | 1.2:+77724264 | None:intergenic |
| AGCAGCCACCGTGTGGCAGT+TGG | 0.535364 | 1.2:-77725570 | MS.gene071660:CDS |
| GACTCAAGCTCTTCATACTC+TGG | 0.539130 | 1.2:+77724616 | None:intergenic |
| TTCTCTTCCAAACTCCTCGT+CGG | 0.541082 | 1.2:+77726320 | None:intergenic |
| TGTTCTAGTGGCATAAGTCT+TGG | 0.542816 | 1.2:+77725715 | None:intergenic |
| ATGACTATGAACTCCAACTC+TGG | 0.543976 | 1.2:-77724855 | MS.gene071660:CDS |
| TGATGGCACATTGAAGCCAC+TGG | 0.547462 | 1.2:-77725675 | MS.gene071660:CDS |
| CCAATCCATCAACAGCAAAA+GGG | 0.547802 | 1.2:+77724953 | None:intergenic |
| AGTGGCATAAGTCTTGGTGT+TGG | 0.551056 | 1.2:+77725721 | None:intergenic |
| GGACTTCTTTCCACCAGAGT+TGG | 0.552594 | 1.2:+77724842 | None:intergenic |
| AGGGTATAAGGCAATTTCAC+TGG | 0.553038 | 1.2:+77724346 | None:intergenic |
| TATGCACGTCCTGTTATTGG+TGG | 0.553422 | 1.2:-77726933 | MS.gene071660:CDS |
| TCGAAGATAATGGTTTCAGA+TGG | 0.555854 | 1.2:+77724252 | None:intergenic |
| ATCATCAACTAGTTAGCCAT+TGG | 0.556688 | 1.2:-77725514 | MS.gene071660:intron |
| TTTCAGATGGATATGCTGTT+GGG | 0.562946 | 1.2:+77724265 | None:intergenic |
| CAGAGGTATTGGGAAACAGA+AGG | 0.564989 | 1.2:+77724326 | None:intergenic |
| GTCTAGGCATTCGACTGAAG+AGG | 0.565700 | 1.2:-77724515 | MS.gene071660:CDS |
| GCTCCATGTTGTTCGCCTTG+TGG | 0.566016 | 1.2:+77725629 | None:intergenic |
| CATTGATAGAAGTTCTGTCT+AGG | 0.566059 | 1.2:-77724531 | MS.gene071660:CDS |
| GACTTGGGAACTCCAGATGA+TGG | 0.568774 | 1.2:-77726963 | MS.gene071660:CDS |
| TCGGTAGGTAACCTGCATAA+GGG | 0.571259 | 1.2:+77724683 | None:intergenic |
| GATTGGGAAACTTAATGAGT+GGG | 0.571518 | 1.2:-77727016 | None:intergenic |
| CGTCAGGCACAGGGAATCTG+AGG | 0.571634 | 1.2:+77726465 | None:intergenic |
| TGGAAAGAAGTCCGCAATGA+GGG | 0.572321 | 1.2:-77724832 | MS.gene071660:CDS |
| ATGGGATGCAATTGAAACTT+GGG | 0.572488 | 1.2:-77724926 | MS.gene071660:CDS |
| ACCTCTGATTATTCTAGGGA+GGG | 0.573596 | 1.2:-77724310 | MS.gene071660:CDS |
| CCTGTGCCTGACGTGATCAA+AGG | 0.574820 | 1.2:-77726455 | MS.gene071660:intron |
| GATAAGTGTATGCCTAGCTA+AGG | 0.581024 | 1.2:+77725296 | None:intergenic |
| TGCATATAAATGCCTTAGCT+AGG | 0.583152 | 1.2:-77725308 | MS.gene071660:CDS |
| ACATAGAAAATAGTTTAGAT+GGG | 0.583343 | 1.2:-77725957 | MS.gene071660:CDS |
| GTGTCCAGCTTGCTGGCAGG+AGG | 0.584474 | 1.2:+77726021 | None:intergenic |
| ATGCACCATTATTATATGGG+TGG | 0.585985 | 1.2:-77724743 | MS.gene071660:CDS |
| CATCCACAAGGCGAACAACA+TGG | 0.587970 | 1.2:-77725632 | MS.gene071660:CDS |
| TTGTAGCTAGTAAGACTGCA+TGG | 0.588566 | 1.2:-77726347 | MS.gene071660:intron |
| ATCGTCCAACGGTTAGTCGT+AGG | 0.588734 | 1.2:-77724660 | MS.gene071660:CDS |
| AGAGGTATTGGGAAACAGAA+GGG | 0.589597 | 1.2:+77724327 | None:intergenic |
| TACCTCTGATTATTCTAGGG+AGG | 0.589828 | 1.2:-77724311 | MS.gene071660:CDS |
| GAAGTCCGCAATGAGGGTCA+TGG | 0.598469 | 1.2:-77724826 | MS.gene071660:CDS |
| ACTATGAACTCCAACTCTGG+TGG | 0.599037 | 1.2:-77724852 | MS.gene071660:CDS |
| CGCTTTAGCCAACTGCCACA+CGG | 0.602659 | 1.2:+77725562 | None:intergenic |
| TACCTGCTAATCTGCTCAAG+AGG | 0.604331 | 1.2:-77725173 | MS.gene071660:intron |
| TGCATTGTATCCTTAAAGTG+TGG | 0.611019 | 1.2:+77725327 | None:intergenic |
| TAGAAACAGAAGTGTTCTAG+TGG | 0.621253 | 1.2:+77725703 | None:intergenic |
| CGTAGGTTTATGCCTGAGCA+AGG | 0.621400 | 1.2:-77724643 | MS.gene071660:CDS |
| TCTGATTATTCTAGGGAGGG+TGG | 0.621847 | 1.2:-77724307 | MS.gene071660:CDS |
| TATGCATGCTACAATGACTT+GGG | 0.623291 | 1.2:-77726978 | MS.gene071660:CDS |
| AATCGCTTGAATGCTGCCAA+TGG | 0.623292 | 1.2:+77724445 | None:intergenic |
| TTTCCAATGCAAATTTACCA+GGG | 0.625740 | 1.2:+77725241 | None:intergenic |
| CTTTGATCACGTCAGGCACA+GGG | 0.626045 | 1.2:+77726456 | None:intergenic |
| GCGACTTAAAGGATAGGTCA+TGG | 0.629220 | 1.2:-77724804 | MS.gene071660:CDS |
| TATATAGTCGTACTTGGAGA+CGG | 0.632760 | 1.2:+77726265 | None:intergenic |
| ATACACTTATCAATGCTGGA+GGG | 0.636307 | 1.2:-77725284 | MS.gene071660:CDS |
| CATACACTTATCAATGCTGG+AGG | 0.637914 | 1.2:-77725285 | MS.gene071660:CDS |
| AAGCTTAATTCGATAGCCAG+TGG | 0.639310 | 1.2:+77725659 | None:intergenic |
| GGATTGGGAAACTTAATGAG+TGG | 0.639444 | 1.2:-77727017 | None:intergenic |
| AGTCGCCATGACCCTCATTG+CGG | 0.642860 | 1.2:+77724821 | None:intergenic |
| TTACCTACCGAATCGTCCAA+CGG | 0.648964 | 1.2:-77724671 | MS.gene071660:CDS |
| TGGAAGAGAAATGCTTGCTG+GGG | 0.650436 | 1.2:-77726307 | MS.gene071660:CDS |
| TACACTTATCAATGCTGGAG+GGG | 0.655663 | 1.2:-77725283 | MS.gene071660:CDS |
| AGATGGGCTCACAATAGATG+AGG | 0.660682 | 1.2:-77725941 | MS.gene071660:intron |
| GTGGAAAGAAGTCCGCAATG+AGG | 0.664613 | 1.2:-77724833 | MS.gene071660:CDS |
| AAGTTTCCTTATCCACGTCG+AGG | 0.665623 | 1.2:-77726903 | MS.gene071660:CDS |
| CGACTAGTTCTTCCTCGACG+TGG | 0.666072 | 1.2:+77726891 | None:intergenic |
| GTCATGGCGACTTAAAGGAT+AGG | 0.670364 | 1.2:-77724810 | MS.gene071660:CDS |
| ATAAACCTACGACTAACCGT+TGG | 0.677401 | 1.2:+77724655 | None:intergenic |
| AAGGAGTAGCAGCCACCGTG+TGG | 0.681369 | 1.2:-77725577 | MS.gene071660:CDS |
| ACCCTCCCTAGAATAATCAG+AGG | 0.685577 | 1.2:+77724309 | None:intergenic |
| TAACCGTTGGACGATTCGGT+AGG | 0.688836 | 1.2:+77724668 | None:intergenic |
| TTAAGCTTACCTCATCCACA+AGG | 0.690256 | 1.2:-77725644 | MS.gene071660:CDS |
| GACTGCATGGAGGACCGACG+AGG | 0.716013 | 1.2:-77726334 | MS.gene071660:CDS |
| GGAGACGGCGAATGATAACA+GGG | 0.731478 | 1.2:+77726280 | None:intergenic |
| TTTAGCCAACTGCCACACGG+TGG | 0.746743 | 1.2:+77725565 | None:intergenic |
| ACTTAAAGGATAGGTCATGG+TGG | 0.760119 | 1.2:-77724801 | MS.gene071660:CDS |
| TAGCTAGTAAGACTGCATGG+AGG | 0.796361 | 1.2:-77726344 | MS.gene071660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCACTTATATTTAAGTT+CGG | + | chr1.2:77725039-77725058 | None:intergenic | 15.0% |
| !! | AATGTTTCATGTAAAATTCA+AGG | + | chr1.2:77725175-77725194 | None:intergenic | 20.0% |
| !! | ACATAGAAAATAGTTTAGAT+GGG | - | chr1.2:77725312-77725331 | MS.gene071660:CDS | 20.0% |
| !! | AGCTGTTGTATATAAAAATT+GGG | - | chr1.2:77726055-77726074 | MS.gene071660:intron | 20.0% |
| !! | CTATTTGTAGCTATTATAAA+TGG | + | chr1.2:77725882-77725901 | None:intergenic | 20.0% |
| !! | TATTAAAGTTTCAAACACTT+TGG | + | chr1.2:77725815-77725834 | None:intergenic | 20.0% |
| !! | TTAACCTTCCTTTAATAAAA+TGG | - | chr1.2:77724850-77724869 | MS.gene071660:CDS | 20.0% |
| !!! | CAATGATTCCATTTTATTAA+AGG | + | chr1.2:77724861-77724880 | None:intergenic | 20.0% |
| !!! | TACCATTTGTTTTGATAAAT+TGG | + | chr1.2:77726211-77726230 | None:intergenic | 20.0% |
| ! | AATCATGCACCATTATTATA+TGG | - | chr1.2:77726522-77726541 | MS.gene071660:intron | 25.0% |
| ! | ATCATGCACCATTATTATAT+GGG | - | chr1.2:77726523-77726542 | MS.gene071660:intron | 25.0% |
| ! | CACATAGAAAATAGTTTAGA+TGG | - | chr1.2:77725311-77725330 | MS.gene071660:CDS | 25.0% |
| ! | CAGCTGTTGTATATAAAAAT+TGG | - | chr1.2:77726054-77726073 | MS.gene071660:intron | 25.0% |
| ! | CTAAAATCTCATAAGGAATA+AGG | + | chr1.2:77724754-77724773 | None:intergenic | 25.0% |
| ! | GAACATAAATGTTTAGATTC+AGG | + | chr1.2:77724528-77724547 | None:intergenic | 25.0% |
| ! | GAGTTTATTCTACTTATGTA+TGG | + | chr1.2:77725526-77725545 | None:intergenic | 25.0% |
| ! | GATGTACTTGATATTTATGA+AGG | - | chr1.2:77724682-77724701 | MS.gene071660:CDS | 25.0% |
| ! | GTCCAATTTATCAAAACAAA+TGG | - | chr1.2:77726206-77726225 | MS.gene071660:intron | 25.0% |
| ! | TTGAGAATAACATCATGAAA+AGG | - | chr1.2:77726867-77726886 | MS.gene071660:intron | 25.0% |
| !! | ATTTCATTTGAAACTTTCAG+AGG | - | chr1.2:77726236-77726255 | MS.gene071660:intron | 25.0% |
| !! | CTCTAATTTTTACTATGCAA+AGG | + | chr1.2:77724730-77724749 | None:intergenic | 25.0% |
| !! | GATTCCATTTTATTAAAGGA+AGG | + | chr1.2:77724857-77724876 | None:intergenic | 25.0% |
| !! | TCAATGTTTCTTTTACATGT+AGG | - | chr1.2:77725220-77725239 | MS.gene071660:CDS | 25.0% |
| !!! | AAGTTCTCTAAAATCTCATA+AGG | + | chr1.2:77724761-77724780 | None:intergenic | 25.0% |
| !!! | AGAGCGTTTTTTTTTTTCAT+AGG | + | chr1.2:77726180-77726199 | None:intergenic | 25.0% |
| !!! | ATATGTACTTGGCTTTAATT+CGG | + | chr1.2:77725079-77725098 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGAATGCTAATTC+AGG | + | chr1.2:77726683-77726702 | None:intergenic | 25.0% |
| AAACTTCTAACAGTGCAAAT+AGG | - | chr1.2:77726134-77726153 | MS.gene071660:intron | 30.0% | |
| AACTTCTAACAGTGCAAATA+GGG | - | chr1.2:77726135-77726154 | MS.gene071660:intron | 30.0% | |
| ATAAACTATGATTCTTGTGC+AGG | - | chr1.2:77725832-77725851 | MS.gene071660:intron | 30.0% | |
| ATCAAACTTCTTTATGTTGC+AGG | - | chr1.2:77725450-77725469 | MS.gene071660:intron | 30.0% | |
| ATTTCCAATGCAAATTTACC+AGG | + | chr1.2:77726032-77726051 | None:intergenic | 30.0% | |
| ATTTGCACTGTTAGAAGTTT+CGG | + | chr1.2:77726134-77726153 | None:intergenic | 30.0% | |
| CAATACCTCTGATTATTCTA+GGG | - | chr1.2:77726955-77726974 | MS.gene071660:CDS | 30.0% | |
| GAGTATTATATAGTCGTACT+TGG | + | chr1.2:77725013-77725032 | None:intergenic | 30.0% | |
| GCAAAAAACGTATATGTACT+TGG | + | chr1.2:77725090-77725109 | None:intergenic | 30.0% | |
| TTTCCAATGCAAATTTACCA+GGG | + | chr1.2:77726031-77726050 | None:intergenic | 30.0% | |
| ! | CACTTATATTTAAGTTCGGA+AGG | + | chr1.2:77725035-77725054 | None:intergenic | 30.0% |
| ! | TATTTTCTATGTGCTTTGCT+TGG | + | chr1.2:77725304-77725323 | None:intergenic | 30.0% |
| ! | TCAATTCTAGTCTTCATTTG+TGG | + | chr1.2:77726494-77726513 | None:intergenic | 30.0% |
| ! | TTTTGTGAATGACATACCAA+TGG | + | chr1.2:77725774-77725793 | None:intergenic | 30.0% |
| !! | ATCATAAGTTTTAGTCCATG+AGG | + | chr1.2:77726287-77726306 | None:intergenic | 30.0% |
| !! | CTAGAATAATCAGAGGTATT+GGG | + | chr1.2:77726956-77726975 | None:intergenic | 30.0% |
| !! | GAGATTTTAGAGAACTTGTT+AGG | - | chr1.2:77724764-77724783 | MS.gene071660:CDS | 30.0% |
| !! | TCATAAGTTTTAGTCCATGA+GGG | + | chr1.2:77726286-77726305 | None:intergenic | 30.0% |
| !! | TGTTGATGGATTGGAAATAT+GGG | - | chr1.2:77726325-77726344 | MS.gene071660:CDS | 30.0% |
| AGAAGCCACCCATATAATAA+TGG | + | chr1.2:77726534-77726553 | None:intergenic | 35.0% | |
| ATACACTTATCAATGCTGGA+GGG | - | chr1.2:77725985-77726004 | MS.gene071660:CDS | 35.0% | |
| ATCATCAACTAGTTAGCCAT+TGG | - | chr1.2:77725755-77725774 | MS.gene071660:CDS | 35.0% | |
| ATGCACCATTATTATATGGG+TGG | - | chr1.2:77726526-77726545 | MS.gene071660:intron | 35.0% | |
| ATGGGATGCAATTGAAACTT+GGG | - | chr1.2:77726343-77726362 | MS.gene071660:CDS | 35.0% | |
| CAAGGAACATATTGAGAAGA+AGG | + | chr1.2:77725157-77725176 | None:intergenic | 35.0% | |
| CAAGTTTGAAGAACAGAAAC+GGG | - | chr1.2:77726900-77726919 | MS.gene071660:CDS | 35.0% | |
| CATTGATAGAAGTTCTGTCT+AGG | - | chr1.2:77726738-77726757 | MS.gene071660:CDS | 35.0% | |
| CCAAGTTTGAAGAACAGAAA+CGG | - | chr1.2:77726899-77726918 | MS.gene071660:CDS | 35.0% | |
| CCAATACCTCTGATTATTCT+AGG | - | chr1.2:77726954-77726973 | MS.gene071660:CDS | 35.0% | |
| CGTTTCTGTTCTTCAAACTT+GGG | + | chr1.2:77726901-77726920 | None:intergenic | 35.0% | |
| GCAACACAAACATTAGAGAT+CGG | - | chr1.2:77724422-77724441 | MS.gene071660:CDS | 35.0% | |
| TATATACCTTTGATCACGTC+AGG | + | chr1.2:77724823-77724842 | None:intergenic | 35.0% | |
| TATATAGTCGTACTTGGAGA+CGG | + | chr1.2:77725007-77725026 | None:intergenic | 35.0% | |
| TATGCATGCTACAATGACTT+GGG | - | chr1.2:77724291-77724310 | MS.gene071660:CDS | 35.0% | |
| TATGGGATGCAATTGAAACT+TGG | - | chr1.2:77726342-77726361 | MS.gene071660:CDS | 35.0% | |
| TGCATATAAATGCCTTAGCT+AGG | - | chr1.2:77725961-77725980 | MS.gene071660:CDS | 35.0% | |
| TGCATTGTATCCTTAAAGTG+TGG | + | chr1.2:77725945-77725964 | None:intergenic | 35.0% | |
| TTTCCCTGGTAAATTTGCAT+TGG | - | chr1.2:77726025-77726044 | MS.gene071660:CDS | 35.0% | |
| ! | CCTAGAATAATCAGAGGTAT+TGG | + | chr1.2:77726957-77726976 | None:intergenic | 35.0% |
| ! | TGCAATCTTGACTCAGTTTT+AGG | + | chr1.2:77724502-77724521 | None:intergenic | 35.0% |
| ! | TTGCTTGGATGGAACTATTT+TGG | + | chr1.2:77725289-77725308 | None:intergenic | 35.0% |
| ! | TTTTCTGATCCACCAATAAC+AGG | + | chr1.2:77724348-77724367 | None:intergenic | 35.0% |
| !! | AGAGAACTTGTTAGGAATGA+TGG | - | chr1.2:77724772-77724791 | MS.gene071660:CDS | 35.0% |
| !! | CTGTTGATGGATTGGAAATA+TGG | - | chr1.2:77726324-77726343 | MS.gene071660:CDS | 35.0% |
| !! | CTTCTGTTTCTACAAGATGA+TGG | - | chr1.2:77725577-77725596 | MS.gene071660:CDS | 35.0% |
| !! | TAGAAACAGAAGTGTTCTAG+TGG | + | chr1.2:77725569-77725588 | None:intergenic | 35.0% |
| !! | TTTGTGTTGCTAACCTGTTT+TGG | + | chr1.2:77724412-77724431 | None:intergenic | 35.0% |
| AAGCTGGACACAAATGTCTA+TGG | - | chr1.2:77725260-77725279 | MS.gene071660:CDS | 40.0% | |
| AAGCTTAATTCGATAGCCAG+TGG | + | chr1.2:77725613-77725632 | None:intergenic | 40.0% | |
| AATAGGGTTACCTCATGTAG+AGG | - | chr1.2:77726151-77726170 | MS.gene071660:intron | 40.0% | |
| ACTTAAAGGATAGGTCATGG+TGG | - | chr1.2:77726468-77726487 | MS.gene071660:CDS | 40.0% | |
| AGGCATACACTTATCAATGC+TGG | - | chr1.2:77725981-77726000 | MS.gene071660:CDS | 40.0% | |
| AGGGTATAAGGCAATTTCAC+TGG | + | chr1.2:77726926-77726945 | None:intergenic | 40.0% | |
| ATAAACCTACGACTAACCGT+TGG | + | chr1.2:77726617-77726636 | None:intergenic | 40.0% | |
| ATAACAGGACGTGCATAATC+TGG | + | chr1.2:77724333-77724352 | None:intergenic | 40.0% | |
| ATAGGGTTACCTCATGTAGA+GGG | - | chr1.2:77726152-77726171 | MS.gene071660:intron | 40.0% | |
| ATGACACACCAAGAAGAGTT+TGG | + | chr1.2:77726721-77726740 | None:intergenic | 40.0% | |
| ATGACTATGAACTCCAACTC+TGG | - | chr1.2:77726414-77726433 | MS.gene071660:intron | 40.0% | |
| CATACACTTATCAATGCTGG+AGG | - | chr1.2:77725984-77726003 | MS.gene071660:CDS | 40.0% | |
| CCAATCCATCAACAGCAAAA+GGG | + | chr1.2:77726319-77726338 | None:intergenic | 40.0% | |
| CCGTTTCTGTTCTTCAAACT+TGG | + | chr1.2:77726902-77726921 | None:intergenic | 40.0% | |
| CTATGCATGCTACAATGACT+TGG | - | chr1.2:77724290-77724309 | MS.gene071660:CDS | 40.0% | |
| GATAAGTGTATGCCTAGCTA+AGG | + | chr1.2:77725976-77725995 | None:intergenic | 40.0% | |
| GATTATGCACGTCCTGTTAT+TGG | - | chr1.2:77724333-77724352 | MS.gene071660:CDS | 40.0% | |
| GGCTTCAAGAGCTTATGAAT+TGG | + | chr1.2:77725924-77725943 | None:intergenic | 40.0% | |
| GTTCCAAGAGATGAACAGTT+TGG | - | chr1.2:77724544-77724563 | MS.gene071660:CDS | 40.0% | |
| TACACTTATCAATGCTGGAG+GGG | - | chr1.2:77725986-77726005 | MS.gene071660:CDS | 40.0% | |
| TACTATGCAAAGGTCCACTT+GGG | + | chr1.2:77724720-77724739 | None:intergenic | 40.0% | |
| TATGCTGCTGTGAATGATTC+AGG | - | chr1.2:77725730-77725749 | MS.gene071660:CDS | 40.0% | |
| TCACATAGAGATCTAAGCTC+TGG | + | chr1.2:77724631-77724650 | None:intergenic | 40.0% | |
| TCCAATCCATCAACAGCAAA+AGG | + | chr1.2:77726320-77726339 | None:intergenic | 40.0% | |
| TCGACTGAAGAGGTTTATCT+TGG | - | chr1.2:77726764-77726783 | MS.gene071660:CDS | 40.0% | |
| TGACCAAACTGTTCATCTCT+TGG | + | chr1.2:77724550-77724569 | None:intergenic | 40.0% | |
| TGTTCTAGTGGCATAAGTCT+TGG | + | chr1.2:77725557-77725576 | None:intergenic | 40.0% | |
| TTAAGCTTACCTCATCCACA+AGG | - | chr1.2:77725625-77725644 | MS.gene071660:CDS | 40.0% | |
| TTACTATGCAAAGGTCCACT+TGG | + | chr1.2:77724721-77724740 | None:intergenic | 40.0% | |
| TTCACTCAAATCTGTTGCTC+AGG | - | chr1.2:77724597-77724616 | MS.gene071660:CDS | 40.0% | |
| TTCTATGTGCTTTGCTTGGA+TGG | + | chr1.2:77725300-77725319 | None:intergenic | 40.0% | |
| TTGGAAGAGAAATGCTTGCT+GGG | - | chr1.2:77724961-77724980 | MS.gene071660:CDS | 40.0% | |
| TTGTAGCTAGTAAGACTGCA+TGG | - | chr1.2:77724922-77724941 | MS.gene071660:CDS | 40.0% | |
| TTTCATGCAGCTGTGAACTT+TGG | - | chr1.2:77726557-77726576 | MS.gene071660:intron | 40.0% | |
| TTTGGAAGAGAAATGCTTGC+TGG | - | chr1.2:77724960-77724979 | MS.gene071660:CDS | 40.0% | |
| TTTGGACAATACCCTTATGC+AGG | - | chr1.2:77726575-77726594 | MS.gene071660:intron | 40.0% | |
| ! | ACCTCTGATTATTCTAGGGA+GGG | - | chr1.2:77726959-77726978 | MS.gene071660:CDS | 40.0% |
| ! | CAGCATCTGAAGTCCAATTA+GGG | + | chr1.2:77726802-77726821 | None:intergenic | 40.0% |
| ! | CTAGAGAAAACAGTTTTCCC+TGG | - | chr1.2:77726011-77726030 | MS.gene071660:CDS | 40.0% |
| ! | GTTTTCACTCCATCACATGA+AGG | - | chr1.2:77725673-77725692 | MS.gene071660:CDS | 40.0% |
| ! | TACCTCTGATTATTCTAGGG+AGG | - | chr1.2:77726958-77726977 | MS.gene071660:CDS | 40.0% |
| ! | TCAGCATCTGAAGTCCAATT+AGG | + | chr1.2:77726803-77726822 | None:intergenic | 40.0% |
| ! | TTGGGAAACAGAAGGGTATA+AGG | + | chr1.2:77726938-77726957 | None:intergenic | 40.0% |
| !! | AGAGGTATTGGGAAACAGAA+GGG | + | chr1.2:77726945-77726964 | None:intergenic | 40.0% |
| !!! | TGCTAACCTGTTTTGGTATG+TGG | + | chr1.2:77724405-77724424 | None:intergenic | 40.0% |
| AAGTTTCCTTATCCACGTCG+AGG | - | chr1.2:77724366-77724385 | MS.gene071660:CDS | 45.0% | |
| AATCGCTTGAATGCTGCCAA+TGG | + | chr1.2:77726827-77726846 | None:intergenic | 45.0% | |
| ACCCTCCCTAGAATAATCAG+AGG | + | chr1.2:77726963-77726982 | None:intergenic | 45.0% | |
| ACTATGAACTCCAACTCTGG+TGG | - | chr1.2:77726417-77726436 | MS.gene071660:intron | 45.0% | |
| AGTCGTCCACATACCAAAAC+AGG | - | chr1.2:77724396-77724415 | MS.gene071660:CDS | 45.0% | |
| CCAGATTCAAATAGCCCTCA+TGG | - | chr1.2:77726269-77726288 | MS.gene071660:intron | 45.0% | |
| CCATGAGGGCTATTTGAATC+TGG | + | chr1.2:77726272-77726291 | None:intergenic | 45.0% | |
| GACAGACAGTAGACCCTAAT+TGG | - | chr1.2:77726786-77726805 | MS.gene071660:intron | 45.0% | |
| GACTCAAGCTCTTCATACTC+TGG | + | chr1.2:77726656-77726675 | None:intergenic | 45.0% | |
| GACTTCAGATGCTGAACCAT+TGG | - | chr1.2:77726808-77726827 | MS.gene071660:intron | 45.0% | |
| GCATAATCTGGACCATCATC+TGG | + | chr1.2:77724321-77724340 | None:intergenic | 45.0% | |
| GCGACTTAAAGGATAGGTCA+TGG | - | chr1.2:77726465-77726484 | MS.gene071660:CDS | 45.0% | |
| GCTCAGTTCCAAACTCTTCT+TGG | - | chr1.2:77726710-77726729 | MS.gene071660:CDS | 45.0% | |
| GCTCTTGAAGCCACACTTTA+AGG | - | chr1.2:77725932-77725951 | MS.gene071660:intron | 45.0% | |
| GTCATGGCGACTTAAAGGAT+AGG | - | chr1.2:77726459-77726478 | MS.gene071660:CDS | 45.0% | |
| TACCTCTTGAGCAGATTAGC+AGG | + | chr1.2:77726101-77726120 | None:intergenic | 45.0% | |
| TACCTGCTAATCTGCTCAAG+AGG | - | chr1.2:77726096-77726115 | MS.gene071660:intron | 45.0% | |
| TAGCTAGTAAGACTGCATGG+AGG | - | chr1.2:77724925-77724944 | MS.gene071660:CDS | 45.0% | |
| TATGCACGTCCTGTTATTGG+TGG | - | chr1.2:77724336-77724355 | MS.gene071660:CDS | 45.0% | |
| TCATAGGTTCCCTCTACATG+AGG | + | chr1.2:77726164-77726183 | None:intergenic | 45.0% | |
| TCGGTAGGTAACCTGCATAA+GGG | + | chr1.2:77726589-77726608 | None:intergenic | 45.0% | |
| TGGAAAGAAGTCCGCAATGA+GGG | - | chr1.2:77726437-77726456 | MS.gene071660:intron | 45.0% | |
| TTACCTACCGAATCGTCCAA+CGG | - | chr1.2:77726598-77726617 | MS.gene071660:intron | 45.0% | |
| TTCGGTAGGTAACCTGCATA+AGG | + | chr1.2:77726590-77726609 | None:intergenic | 45.0% | |
| TTCTCTTCCAAACTCCTCGT+CGG | + | chr1.2:77724952-77724971 | None:intergenic | 45.0% | |
| ! | AGATGGGCTCACAATAGATG+AGG | - | chr1.2:77725328-77725347 | MS.gene071660:CDS | 45.0% |
| ! | AGTGGCATAAGTCTTGGTGT+TGG | + | chr1.2:77725551-77725570 | None:intergenic | 45.0% |
| ! | GCGATTTTCACAGAAGCTGT+TGG | - | chr1.2:77726841-77726860 | MS.gene071660:intron | 45.0% |
| ! | TCTGATTATTCTAGGGAGGG+TGG | - | chr1.2:77726962-77726981 | MS.gene071660:CDS | 45.0% |
| ! | TGGAAGAGAAATGCTTGCTG+GGG | - | chr1.2:77724962-77724981 | MS.gene071660:CDS | 45.0% |
| !! | CAGAGGTATTGGGAAACAGA+AGG | + | chr1.2:77726946-77726965 | None:intergenic | 45.0% |
| !! | GGAAGTTTTAACCTCCCAAG+TGG | - | chr1.2:77724703-77724722 | MS.gene071660:CDS | 45.0% |
| !!! | CCCTTTTGCTGTTGATGGAT+TGG | - | chr1.2:77726316-77726335 | MS.gene071660:CDS | 45.0% |
| !!! | GACTACCCTTTTGCTGTTGA+TGG | - | chr1.2:77726311-77726330 | MS.gene071660:CDS | 45.0% |
| !! | TTTCATTAATTAATTAATAT+TGG | - | chr1.2:77724893-77724912 | MS.gene071660:CDS | 5.0% |
| CATCCACAAGGCGAACAACA+TGG | - | chr1.2:77725637-77725656 | MS.gene071660:CDS | 50.0% | |
| CGACTAACCGTTGGACGATT+CGG | + | chr1.2:77726608-77726627 | None:intergenic | 50.0% | |
| CGTAGGTTTATGCCTGAGCA+AGG | - | chr1.2:77726626-77726645 | MS.gene071660:CDS | 50.0% | |
| CTTTGATCACGTCAGGCACA+GGG | + | chr1.2:77724816-77724835 | None:intergenic | 50.0% | |
| GACATTTGTGTCCAGCTTGC+TGG | + | chr1.2:77725258-77725277 | None:intergenic | 50.0% | |
| GACTTGGGAACTCCAGATGA+TGG | - | chr1.2:77724306-77724325 | MS.gene071660:CDS | 50.0% | |
| GCTGCTACTCCTTCATGTGA+TGG | + | chr1.2:77725685-77725704 | None:intergenic | 50.0% | |
| GGACTTCTTTCCACCAGAGT+TGG | + | chr1.2:77726430-77726449 | None:intergenic | 50.0% | |
| GGAGACGGCGAATGATAACA+GGG | + | chr1.2:77724992-77725011 | None:intergenic | 50.0% | |
| GTCTAGGCATTCGACTGAAG+AGG | - | chr1.2:77726754-77726773 | MS.gene071660:CDS | 50.0% | |
| GTGGAAAGAAGTCCGCAATG+AGG | - | chr1.2:77726436-77726455 | MS.gene071660:intron | 50.0% | |
| GTTCTTCCTCGACGTGGATA+AGG | + | chr1.2:77724375-77724394 | None:intergenic | 50.0% | |
| TACTCTGGTGTACCTTGCTC+AGG | + | chr1.2:77726641-77726660 | None:intergenic | 50.0% | |
| TATGCAAAGGTCCACTTGGG+AGG | + | chr1.2:77724717-77724736 | None:intergenic | 50.0% | |
| TGAGGGTCATGGCGACTTAA+AGG | - | chr1.2:77726454-77726473 | MS.gene071660:intron | 50.0% | |
| TGATGGCACATTGAAGCCAC+TGG | - | chr1.2:77725594-77725613 | MS.gene071660:CDS | 50.0% | |
| TGGAGACGGCGAATGATAAC+AGG | + | chr1.2:77724993-77725012 | None:intergenic | 50.0% | |
| TGTTGTTCGCCTTGTGGATG+AGG | + | chr1.2:77725637-77725656 | None:intergenic | 50.0% | |
| ! | ATCGTCCAACGGTTAGTCGT+AGG | - | chr1.2:77726609-77726628 | MS.gene071660:intron | 50.0% |
| !! | TAACCGTTGGACGATTCGGT+AGG | + | chr1.2:77726604-77726623 | None:intergenic | 50.0% |
| AGTCGCCATGACCCTCATTG+CGG | + | chr1.2:77726451-77726470 | None:intergenic | 55.0% | |
| ATTTCCTCCTGCCAGCAAGC+TGG | - | chr1.2:77725244-77725263 | MS.gene071660:CDS | 55.0% | |
| CCTGTGCCTGACGTGATCAA+AGG | - | chr1.2:77724814-77724833 | MS.gene071660:CDS | 55.0% | |
| CCTTTGATCACGTCAGGCAC+AGG | + | chr1.2:77724817-77724836 | None:intergenic | 55.0% | |
| CGCTTTAGCCAACTGCCACA+CGG | + | chr1.2:77725710-77725729 | None:intergenic | 55.0% | |
| GAAGTCCGCAATGAGGGTCA+TGG | - | chr1.2:77726443-77726462 | MS.gene071660:intron | 55.0% | |
| GCTCCATGTTGTTCGCCTTG+TGG | + | chr1.2:77725643-77725662 | None:intergenic | 55.0% | |
| TTTAGCCAACTGCCACACGG+TGG | + | chr1.2:77725707-77725726 | None:intergenic | 55.0% | |
| ! | CGACTAGTTCTTCCTCGACG+TGG | + | chr1.2:77724381-77724400 | None:intergenic | 55.0% |
| ! | GAGGGTGGACTCACTGGTAA+GGG | - | chr1.2:77726977-77726996 | MS.gene071660:CDS | 55.0% |
| !! | TTTGTGTCCAGCTTGCTGGC+AGG | + | chr1.2:77725254-77725273 | None:intergenic | 55.0% |
| AAGGAGTAGCAGCCACCGTG+TGG | - | chr1.2:77725692-77725711 | MS.gene071660:CDS | 60.0% | |
| CGTCAGGCACAGGGAATCTG+AGG | + | chr1.2:77724807-77724826 | None:intergenic | 60.0% | |
| TGGAGGACCGACGAGGAGTT+TGG | - | chr1.2:77724942-77724961 | MS.gene071660:CDS | 60.0% | |
| ! | GGAGGGTGGACTCACTGGTA+AGG | - | chr1.2:77726976-77726995 | MS.gene071660:CDS | 60.0% |
| ! | TCTAGGGAGGGTGGACTCAC+TGG | - | chr1.2:77726971-77726990 | MS.gene071660:CDS | 60.0% |
| AGCAGCCACCGTGTGGCAGT+TGG | - | chr1.2:77725699-77725718 | MS.gene071660:CDS | 65.0% | |
| GACTGCATGGAGGACCGACG+AGG | - | chr1.2:77724935-77724954 | MS.gene071660:CDS | 65.0% | |
| !! | GTGTCCAGCTTGCTGGCAGG+AGG | + | chr1.2:77725251-77725270 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 77724267 | 77727024 | 77724267 | ID=MS.gene071660 |
| chr1.2 | mRNA | 77724267 | 77727024 | 77724267 | ID=MS.gene071660.t1;Parent=MS.gene071660 |
| chr1.2 | exon | 77726874 | 77727024 | 77726874 | ID=MS.gene071660.t1.exon1;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77726874 | 77727024 | 77726874 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77726626 | 77726794 | 77726626 | ID=MS.gene071660.t1.exon2;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77726626 | 77726794 | 77726626 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77726456 | 77726517 | 77726456 | ID=MS.gene071660.t1.exon3;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77726456 | 77726517 | 77726456 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77726278 | 77726363 | 77726278 | ID=MS.gene071660.t1.exon4;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77726278 | 77726363 | 77726278 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77725942 | 77726049 | 77725942 | ID=MS.gene071660.t1.exon5;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77725942 | 77726049 | 77725942 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77725515 | 77725819 | 77725515 | ID=MS.gene071660.t1.exon6;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77725515 | 77725819 | 77725515 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77725174 | 77725437 | 77725174 | ID=MS.gene071660.t1.exon7;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77725174 | 77725437 | 77725174 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| chr1.2 | exon | 77724267 | 77725035 | 77724267 | ID=MS.gene071660.t1.exon8;Parent=MS.gene071660.t1 |
| chr1.2 | CDS | 77724267 | 77725035 | 77724267 | ID=cds.MS.gene071660.t1;Parent=MS.gene071660.t1 |
| Gene Sequence |
| Protein sequence |