AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051333

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051333.t1 MTR_4g094300 99.341 759 5 0 1 759 1 759 0.0 1566
MS.gene051333.t1 MTR_8g463270 32.294 449 280 9 21 463 27 457 1.66e-58 213
MS.gene051333.t1 MTR_4g093750 30.570 193 126 5 35 226 32 217 1.27e-13 75.1
MS.gene051333.t1 MTR_4g093750 31.053 190 123 5 38 226 35 217 1.73e-13 74.7
MS.gene051333.t1 MTR_8g099550 27.723 202 135 5 28 226 21 214 1.23e-11 68.6
MS.gene051333.t1 MTR_2g009690 27.861 201 121 5 35 226 41 226 2.55e-11 67.8
MS.gene051333.t1 MTR_8g027675 26.887 212 123 7 28 226 21 213 3.40e-11 67.0
MS.gene051333.t1 MTR_1g032550 27.807 187 127 4 41 226 36 215 3.54e-11 67.0
MS.gene051333.t1 MTR_8g105580 28.342 187 125 4 41 226 36 214 3.60e-11 67.0
MS.gene051333.t1 MTR_8g105580 28.342 187 125 4 41 226 36 214 4.23e-11 66.6
MS.gene051333.t1 MTR_8g009510 28.342 187 126 4 41 226 41 220 4.79e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051333.t1 AT3G19720 78.890 739 156 0 15 753 23 761 0.0 1206
MS.gene051333.t1 AT3G19720 77.267 739 132 1 15 753 23 725 0.0 1170
MS.gene051333.t1 AT3G19720 73.548 775 133 3 15 753 23 761 0.0 1144
MS.gene051333.t1 AT1G53140 29.735 565 363 14 21 570 43 588 1.09e-60 219
MS.gene051333.t1 AT4G33650 29.016 193 122 5 41 226 60 244 2.30e-12 71.2
MS.gene051333.t1 AT4G33650 29.016 193 122 5 41 226 60 244 2.47e-12 71.2
MS.gene051333.t1 AT1G14830 28.877 187 125 4 41 226 36 215 1.27e-11 68.6
MS.gene051333.t1 AT5G42080 27.228 202 136 5 28 226 21 214 1.88e-11 67.4
MS.gene051333.t1 AT2G44590 28.877 187 125 4 41 226 36 215 1.88e-11 68.2
MS.gene051333.t1 AT5G42080 27.228 202 136 5 28 226 21 214 2.95e-11 67.4
MS.gene051333.t1 AT5G42080 27.228 202 136 5 28 226 21 214 3.32e-11 67.0
MS.gene051333.t1 AT5G42080 27.228 202 136 5 28 226 21 214 3.32e-11 67.0

Find 187 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTGAAAGGATTGTTTA+TGG 0.162341 4.1:-19368722 MS.gene051333:CDS
CAGCTGTCATTGCTGCTTAA+AGG 0.162593 4.1:-19371123 MS.gene051333:CDS
CTTGGTTTCTACAGAATTAA+AGG 0.177555 4.1:-19368660 MS.gene051333:intron
CAAGCTTTGTTTCAGCTGTC+TGG 0.191720 4.1:+19368789 None:intergenic
TGCATCCTTGGAGGAGAAAT+TGG 0.198064 4.1:-19371895 MS.gene051333:CDS
AATGCAGGGATGCGTCTTTA+TGG 0.205537 4.1:-19370574 MS.gene051333:CDS
ACAATTTCTTCCCGGGTAAT+TGG 0.225123 4.1:+19370487 None:intergenic
TTCTTTACTTCGGTGCCTTC+TGG 0.270195 4.1:-19372693 MS.gene051333:CDS
AGTAATGGGCCGGCGGGTTT+TGG 0.273814 4.1:+19373453 None:intergenic
ACACTTGATGGATGCATTCT+TGG 0.281907 4.1:-19372726 MS.gene051333:CDS
CGCCTTAGTTGAGGCTCTAA+TGG 0.284584 4.1:-19373506 MS.gene051333:CDS
ATAAAAGAGGGACCTGGATT+TGG 0.320884 4.1:+19373338 None:intergenic
ATTACTCTTCATATGAAATA+TGG 0.321859 4.1:-19373436 MS.gene051333:CDS
TTACCAGATGAGCGAATAAA+TGG 0.323825 4.1:-19370912 MS.gene051333:CDS
TAAGTTGCCTGCACGCCTTC+GGG 0.332712 4.1:-19367819 MS.gene051333:CDS
TAGTCCTGGTGTGTCTATTA+TGG 0.333208 4.1:+19373022 None:intergenic
CTCATGGTCTCTACACAATA+AGG 0.336061 4.1:-19369171 MS.gene051333:intron
CATCTTCAAAAGCAGATTCT+AGG 0.339798 4.1:+19367792 None:intergenic
GGAAACTTACCAAACTTATC+AGG 0.347296 4.1:+19371084 None:intergenic
AGCTGTCATTGCTGCTTAAA+GGG 0.352524 4.1:-19371122 MS.gene051333:CDS
CGCCAGTTCTTAGATTCATT+TGG 0.359410 4.1:-19368956 MS.gene051333:CDS
CCACCTGCGTCTACACTTGA+TGG 0.365304 4.1:-19372738 MS.gene051333:CDS
TTTCGACGCGCCGGCTGTGC+TGG 0.365785 4.1:-19373557 MS.gene051333:CDS
CCTTCTGGAAGAGTTGGTTC+TGG 0.366317 4.1:-19372678 MS.gene051333:CDS
ATCACAGTCCTTGACAATTC+AGG 0.369623 4.1:+19372831 None:intergenic
TGAAAGGATTGTTTATGGTT+TGG 0.374121 4.1:-19368717 MS.gene051333:CDS
GACCAATCTGCAACTTTCAC+TGG 0.376245 4.1:-19367747 MS.gene051333:CDS
TAAAAGAGGGACCTGGATTT+GGG 0.377801 4.1:+19373339 None:intergenic
GATAGAAGATGTTGCATCCT+TGG 0.381459 4.1:-19371907 MS.gene051333:CDS
TTGGTACAACAAATATTTCA+TGG 0.384673 4.1:-19368698 MS.gene051333:CDS
AACCTGTTTGAAATCATCAT+TGG 0.384824 4.1:+19372635 None:intergenic
ATAAGTTGCCTGCACGCCTT+CGG 0.392038 4.1:-19367820 MS.gene051333:CDS
TGGCATACGAGAATATTTCT+TGG 0.392689 4.1:-19368678 MS.gene051333:CDS
CCTCCATTTATTCGCTCATC+TGG 0.395092 4.1:+19370909 None:intergenic
GCCTTAGTTGAGGCTCTAAT+GGG 0.397310 4.1:-19373505 MS.gene051333:CDS
ATGCAGGGATGCGTCTTTAT+GGG 0.398998 4.1:-19370573 MS.gene051333:CDS
ATACAGAAATTGAACTGAAA+AGG 0.399496 4.1:-19367709 MS.gene051333:CDS
CTTCTTTGTCTTGGAGTTGG+TGG 0.400615 4.1:+19373647 None:intergenic
AGGCGCTCTTCCCGTCTGTT+TGG 0.402265 4.1:+19373524 None:intergenic
TTTCGACTAAGTTGGATACT+AGG 0.408928 4.1:-19372806 MS.gene051333:CDS
AAGCTTTGTTTCAGCTGTCT+GGG 0.412861 4.1:+19368790 None:intergenic
CTTCTTTCTTGCTTTGACAA+TGG 0.414823 4.1:+19371867 None:intergenic
AAGCATTTACAATTTCTTCC+CGG 0.417927 4.1:+19370479 None:intergenic
CGCTCTTCCCGTCTGTTTGG+TGG 0.420293 4.1:+19373527 None:intergenic
TCCAAAGTGTACTATCTAGA+AGG 0.422812 4.1:+19368762 None:intergenic
AAGCTCAGTCACGTGGCCTC+TGG 0.425374 4.1:-19368833 MS.gene051333:CDS
CTCCAATGATGATTTCAAAC+AGG 0.429013 4.1:-19372637 MS.gene051333:intron
CACCACCGACGTGGTTGAAC+TGG 0.431077 4.1:+19373479 None:intergenic
CTGCAGATGCATGGAGGACT+TGG 0.434256 4.1:-19369213 MS.gene051333:intron
TTTCTTCTTTGTCTTGGAGT+TGG 0.435132 4.1:+19373644 None:intergenic
TTGAAGAAATACTACAAAAG+AGG 0.443086 4.1:-19371812 MS.gene051333:intron
GTCTTGAAGATTGTAGTGAT+TGG 0.444388 4.1:-19372893 MS.gene051333:CDS
GTCGCGCCTCCTGATAAGTT+TGG 0.444868 4.1:-19371093 MS.gene051333:intron
CGCGCCGGCTGTGCTGGTGG+TGG 0.453623 4.1:-19373551 MS.gene051333:CDS
TGTGATTGTTTCGACTAAGT+TGG 0.455967 4.1:-19372814 MS.gene051333:CDS
TGAGTATCTAAGTGGCCATC+AGG 0.457017 4.1:-19369528 MS.gene051333:CDS
GCATCCTTGGAGGAGAAATT+GGG 0.457953 4.1:-19371894 MS.gene051333:CDS
TATTTCATATGAAGAGTAAT+GGG 0.459153 4.1:+19373439 None:intergenic
GCTGCTTTGCTGCAGATGCA+TGG 0.473544 4.1:-19369222 MS.gene051333:intron
TATCCTTCTCTGTAGAATGC+AGG 0.473558 4.1:-19370589 MS.gene051333:intron
GTGATATAAATCAAGAATTG+AGG 0.473579 4.1:-19371612 MS.gene051333:intron
TAGATAGTACACTTTGGAAT+CGG 0.477027 4.1:-19368757 MS.gene051333:CDS
TTAATCACCTGATGAAGAAA+AGG 0.478366 4.1:+19370283 None:intergenic
CACCAAATGAATCTAAGAAC+TGG 0.480476 4.1:+19368954 None:intergenic
TACAGAAATTGAACTGAAAA+GGG 0.482398 4.1:-19367708 MS.gene051333:intron
ACCAATCTGCAACTTTCACT+GGG 0.486344 4.1:-19367746 MS.gene051333:CDS
TCTTCCTTTCTCCTTCAACT+TGG 0.486429 4.1:+19371434 None:intergenic
AGGTCCTCCCGAAGGCGTGC+AGG 0.495111 4.1:+19367812 None:intergenic
GGATTTGGGAGAGGGACATA+TGG 0.496373 4.1:+19373353 None:intergenic
CGATGCTCCTTCTCAAGAAG+TGG 0.500444 4.1:+19371655 None:intergenic
TGATTCTCCATTCTTTACTT+CGG 0.501902 4.1:-19372703 MS.gene051333:CDS
ATAAACAATCCTTTCAGAAG+AGG 0.502061 4.1:+19368724 None:intergenic
GGTGCATTTGTTGGTGCCGA+TGG 0.507607 4.1:-19370888 MS.gene051333:CDS
TCGGTGCCTTCTGGAAGAGT+TGG 0.507960 4.1:-19372684 MS.gene051333:CDS
CCCCAGTGAAAGTTGCAGAT+TGG 0.507995 4.1:+19367745 None:intergenic
GTGGCCATCAGGTGTTCCTC+AGG 0.508175 4.1:-19369517 MS.gene051333:CDS
TGGCCCACCACCAGCACAGC+CGG 0.510117 4.1:+19373547 None:intergenic
CTGAGCTTTACTTCTAGTTG+TGG 0.513837 4.1:+19368848 None:intergenic
ATATTGAAGCTGAGAATGCC+AGG 0.515323 4.1:-19373124 MS.gene051333:CDS
TCAAATTATATTCAGCACAC+TGG 0.515656 4.1:-19371463 MS.gene051333:intron
GATCATTCCACTTCTTGAGA+AGG 0.515740 4.1:-19371662 MS.gene051333:CDS
AAGCAAGAAAGAAGTAGGAT+AGG 0.516003 4.1:-19371858 MS.gene051333:CDS
ATAAATGGAGGTGCATTTGT+TGG 0.517617 4.1:-19370897 MS.gene051333:CDS
AGTGGGATCATTACAAGCAT+TGG 0.518266 4.1:+19368919 None:intergenic
ACTGGATGAAGCCAAGTTGA+AGG 0.521534 4.1:-19371445 MS.gene051333:CDS
TCAAGAAGTGGAATGATCAA+TGG 0.524088 4.1:+19371667 None:intergenic
GCAGGCAACTTATCCACAAT+GGG 0.524857 4.1:+19367830 None:intergenic
CAGTTCAACCACGTCGGTGG+TGG 0.526497 4.1:-19373478 MS.gene051333:CDS
TTTCCTCTTGATGCCCATTG+TGG 0.528183 4.1:-19367843 MS.gene051333:CDS
AGCACAGCCGGCGCGTCGAA+AGG 0.528895 4.1:+19373559 None:intergenic
ACCTTCTAGATAGTACACTT+TGG 0.529433 4.1:-19368763 MS.gene051333:CDS
TGTCAAAGCAAGAAAGAAGT+AGG 0.531849 4.1:-19371863 MS.gene051333:CDS
TGCAAAGTTGTCGAAGGCAG+AGG 0.532153 4.1:+19369487 None:intergenic
GAAGCCAAGTTGAAGGAGAA+AGG 0.532201 4.1:-19371438 MS.gene051333:CDS
TAAGGAAATAATAATAAAAG+TGG 0.533072 4.1:-19373069 MS.gene051333:CDS
ATTTCTTCCCGGGTAATTGG+AGG 0.533870 4.1:+19370490 None:intergenic
AGGGACCTGGATTTGGGAGA+GGG 0.534883 4.1:+19373345 None:intergenic
ATCCTTCTCTGTAGAATGCA+GGG 0.535796 4.1:-19370588 MS.gene051333:intron
CAGTTCTTAGATTCATTTGG+TGG 0.536557 4.1:-19368953 MS.gene051333:CDS
GCCCATTAGAGCCTCAACTA+AGG 0.536655 4.1:+19373504 None:intergenic
GCGCCGGCTGTGCTGGTGGT+GGG 0.536719 4.1:-19373550 MS.gene051333:CDS
AGCATTTACAATTTCTTCCC+GGG 0.538399 4.1:+19370480 None:intergenic
ATGATGGAACAAACTACTCT+AGG 0.538851 4.1:-19370438 MS.gene051333:intron
CCTTCCCAATTTCTCCTCCA+AGG 0.539759 4.1:+19371890 None:intergenic
TTGTGTAATTGCTGTTGCAA+AGG 0.542310 4.1:-19370323 MS.gene051333:CDS
GTGTCTATTATGGTGAGATT+AGG 0.543431 4.1:+19373032 None:intergenic
CTGTTTGAAATCATCATTGG+AGG 0.543999 4.1:+19372638 None:intergenic
GAAGAAATTGTAAATGCTTG+TGG 0.544926 4.1:-19370475 MS.gene051333:CDS
ATGAAGAGTAATGGGCCGGC+GGG 0.546779 4.1:+19373447 None:intergenic
GGCTTGCACCCTCTTCTGAA+AGG 0.547455 4.1:-19368733 MS.gene051333:CDS
TCAAGTGCCCTCCAATTACC+CGG 0.547552 4.1:-19370498 MS.gene051333:CDS
GAAGGCACCGAAGTAAAGAA+TGG 0.547953 4.1:+19372696 None:intergenic
GGACTAGTTGCTCCTGCACC+AGG 0.550843 4.1:-19373005 MS.gene051333:CDS
CACGCCTGAGGAACACCTGA+TGG 0.551113 4.1:+19369513 None:intergenic
CTTACAGGTATTAGCTTGTG+AGG 0.551276 4.1:+19370855 None:intergenic
GGTGCAGGAGCAACTAGTCC+TGG 0.551746 4.1:+19373008 None:intergenic
TATGTCCCTCTCCCAAATCC+AGG 0.552033 4.1:-19373350 MS.gene051333:intron
TCATGATATGTTCTTGACCA+AGG 0.556614 4.1:-19371406 MS.gene051333:intron
AATTTGCATTACAACGCGCC+TGG 0.559478 4.1:+19372857 None:intergenic
GGATAGGTGTGAGCAAACTT+AGG 0.560619 4.1:-19371842 MS.gene051333:CDS
ATATTTCATATGAAGAGTAA+TGG 0.564525 4.1:+19373438 None:intergenic
TGCAGGGATGCGTCTTTATG+GGG 0.567216 4.1:-19370572 MS.gene051333:CDS
CGACGCGCCGGCTGTGCTGG+TGG 0.567291 4.1:-19373554 MS.gene051333:CDS
CTTTGTTTCAGCTGTCTGGG+TGG 0.567373 4.1:+19368793 None:intergenic
CACTTCTTGAGAAGGAGCAT+CGG 0.568800 4.1:-19371654 MS.gene051333:CDS
ACATGAGTCACGCTCCAACC+TGG 0.574901 4.1:+19373106 None:intergenic
GTGGTGGGCCACCAAACAGA+CGG 0.576585 4.1:-19373535 MS.gene051333:CDS
TTTCTTCCCGGGTAATTGGA+GGG 0.576915 4.1:+19370491 None:intergenic
CGGGAAGAGCGCCTTAGTTG+AGG 0.577376 4.1:-19373515 MS.gene051333:CDS
GAGGGACCTGGATTTGGGAG+AGG 0.577606 4.1:+19373344 None:intergenic
ATTGGAGCAACGCAACTACC+AGG 0.580115 4.1:-19372875 MS.gene051333:CDS
TGGTGGGCCACCAAACAGAC+GGG 0.583216 4.1:-19373534 MS.gene051333:CDS
GTGTAGACGCAGGTGGCGAA+AGG 0.584125 4.1:+19372745 None:intergenic
TGAAGCTGAGAATGCCAGGT+TGG 0.586571 4.1:-19373120 MS.gene051333:CDS
ACAAACAAATGTGCAAGAGA+AGG 0.587825 4.1:-19368882 MS.gene051333:CDS
AAATAGGGCAATACAGGCAC+AGG 0.587978 4.1:-19372976 MS.gene051333:CDS
TAAACAATCCTTTCAGAAGA+GGG 0.590872 4.1:+19368725 None:intergenic
TGCAGGCAACTTATCCACAA+TGG 0.590908 4.1:+19367829 None:intergenic
AAAGATTGTGAGTATCTAAG+TGG 0.591421 4.1:-19369536 MS.gene051333:CDS
GTTGCCTGCACGCCTTCGGG+AGG 0.591678 4.1:-19367816 MS.gene051333:CDS
AGGAGCATCGGAGCGTGACA+AGG 0.595430 4.1:-19371642 MS.gene051333:CDS
ATAGTACACTTTGGAATCGG+AGG 0.596031 4.1:-19368754 MS.gene051333:CDS
TTACAGGTATTAGCTTGTGA+GGG 0.597671 4.1:+19370856 None:intergenic
AAGACGGAGACTCGCAATGA+GGG 0.598166 4.1:+19373413 None:intergenic
TCAGAAGGACGTGAAAATTG+TGG 0.598389 4.1:+19372780 None:intergenic
AGGAAAACTTCAACATCAGA+AGG 0.598510 4.1:+19372765 None:intergenic
TCATATGAAGAGTAATGGGC+CGG 0.598845 4.1:+19373443 None:intergenic
GACATATGGTGAGAAAGAGA+AGG 0.599858 4.1:+19373367 None:intergenic
TTCCAGTTCAACCACGTCGG+TGG 0.601584 4.1:-19373481 MS.gene051333:CDS
GGAGTTGAAGACATTCATGA+TGG 0.606200 4.1:-19370454 MS.gene051333:CDS
AGAAGATGTTGCATCCTTGG+AGG 0.608682 4.1:-19371904 MS.gene051333:CDS
AGGCAGAGGCAACACGCCTG+AGG 0.612673 4.1:+19369501 None:intergenic
CAGTGGTTCATATATTCAAG+CGG 0.622329 4.1:+19367525 None:intergenic
ACATATGGTGAGAAAGAGAA+GGG 0.625084 4.1:+19373368 None:intergenic
GTGAGGGAACTGAACACCAT+CGG 0.625618 4.1:+19370872 None:intergenic
GGATTCTGCAAAGTTGTCGA+AGG 0.629616 4.1:+19369481 None:intergenic
TATCCACAATGGGCATCAAG+AGG 0.631215 4.1:+19367840 None:intergenic
AAATTGATCCTGAATTGTCA+AGG 0.631423 4.1:-19372839 MS.gene051333:CDS
GCACCACACGATATGTCTCA+TGG 0.635950 4.1:-19369187 MS.gene051333:CDS
TGCACAATATCATCGAGCAA+TGG 0.644083 4.1:-19370548 MS.gene051333:CDS
AACTTACCAAACTTATCAGG+AGG 0.646410 4.1:+19371087 None:intergenic
TATGAAGAGTAATGGGCCGG+CGG 0.646689 4.1:+19373446 None:intergenic
CAAGTGCCCTCCAATTACCC+GGG 0.652716 4.1:-19370497 MS.gene051333:CDS
AATACAGGCACAGGCACGAG+CGG 0.652861 4.1:-19372967 MS.gene051333:CDS
CCAGAACCAACTCTTCCAGA+AGG 0.654193 4.1:+19372678 None:intergenic
GCTTTGCTGCAGATGCATGG+AGG 0.654747 4.1:-19369219 MS.gene051333:intron
GCAGGGATGCGTCTTTATGG+GGG 0.654781 4.1:-19370571 MS.gene051333:CDS
TGTGATAGAACAGTTGCAGT+GGG 0.655199 4.1:+19368902 None:intergenic
TGTGCTTGAATCAGTTCCAG+AGG 0.655564 4.1:+19368817 None:intergenic
CAAGACGGAGACTCGCAATG+AGG 0.657241 4.1:+19373412 None:intergenic
TCACACGCCTTTCGACGCGC+CGG 0.661138 4.1:-19373566 MS.gene051333:CDS
AGAAGTAAAGCTCAGTCACG+TGG 0.668138 4.1:-19368840 MS.gene051333:CDS
CCATCAAGTGTAGACGCAGG+TGG 0.674421 4.1:+19372738 None:intergenic
TTGTGATAGAACAGTTGCAG+TGG 0.675737 4.1:+19368901 None:intergenic
CCAGATGAGCGAATAAATGG+AGG 0.675913 4.1:-19370909 MS.gene051333:CDS
CTCACCATAATAGACACACC+AGG 0.677974 4.1:-19373026 MS.gene051333:CDS
CATCCATCAAGTGTAGACGC+AGG 0.679396 4.1:+19372735 None:intergenic
GACAGCTGAAACAAAGCTTG+CGG 0.680189 4.1:-19368786 MS.gene051333:CDS
TCAGAGAGGAGATAACAAGA+CGG 0.684250 4.1:+19373397 None:intergenic
AAGACAAAGAAGAAAACGAG+TGG 0.685207 4.1:-19373636 MS.gene051333:CDS
CCTTGGAGGAGAAATTGGGA+AGG 0.686239 4.1:-19371890 MS.gene051333:CDS
CAGATTCTAGGTCCTCCCGA+AGG 0.687299 4.1:+19367804 None:intergenic
GGCTTCCAGTTCAACCACGT+CGG 0.687558 4.1:-19373484 MS.gene051333:CDS
GAGAAGGGTCATCATCAGAG+AGG 0.690656 4.1:+19373383 None:intergenic
GTGGTGGCACCAAAACCCGC+CGG 0.702784 4.1:-19373462 MS.gene051333:CDS
AGACCATGAGACATATCGTG+TGG 0.704609 4.1:+19369184 None:intergenic
CCAATCTGCAACTTTCACTG+GGG 0.748437 4.1:-19367745 MS.gene051333:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATAAATAATTTTTTAAA+AGG + chr4.1:19370445-19370464 None:intergenic 0.0%
!!! TTATAAATAATTTTTTAAAA+GGG + chr4.1:19370444-19370463 None:intergenic 0.0%
!! TATGAGAAAAAAATATAATT+CGG - chr4.1:19372897-19372916 MS.gene051333:CDS 10.0%
!!! ATTTTTTTTTTCTTTTCTTT+TGG - chr4.1:19370463-19370482 MS.gene051333:CDS 10.0%
!!! TATTTTTTTCTCATAAATTT+TGG + chr4.1:19372892-19372911 None:intergenic 10.0%
!!! TTAACATAATAATTGATTTA+AGG - chr4.1:19372981-19373000 MS.gene051333:CDS 10.0%
!! AGAGAATTATATATTAGTTA+GGG + chr4.1:19371175-19371194 None:intergenic 15.0%
!! ATAGTTTAATTCAATTCTAT+CGG - chr4.1:19368810-19368829 MS.gene051333:CDS 15.0%
!! TAAGGAAATAATAATAAAAG+TGG - chr4.1:19368138-19368157 MS.gene051333:intron 15.0%
!!! AAATATTTTGTTATCTTCAT+AGG - chr4.1:19369633-19369652 MS.gene051333:intron 15.0%
!!! ATTTAATCCTTTTTTTTAAG+AGG - chr4.1:19368028-19368047 MS.gene051333:intron 15.0%
!!! TTTAATTTTGAAGAATAGAT+TGG + chr4.1:19371427-19371446 None:intergenic 15.0%
!! AAAAATGCATAATAAACCAT+TGG + chr4.1:19371603-19371622 None:intergenic 20.0%
!! AAAACAATTGTATAACTTAC+AGG + chr4.1:19370370-19370389 None:intergenic 20.0%
!! AAGATAGAAACGAAAATAAT+AGG + chr4.1:19373305-19373324 None:intergenic 20.0%
!! AATAGATAATAATCTCTAGA+AGG + chr4.1:19373095-19373114 None:intergenic 20.0%
!! AATTTGTGATATTAAAACCT+TGG + chr4.1:19369821-19369840 None:intergenic 20.0%
!! ACAAGAAATTGATATAAAAG+AGG + chr4.1:19367885-19367904 None:intergenic 20.0%
!! AGATAGAAACGAAAATAATA+GGG + chr4.1:19373304-19373323 None:intergenic 20.0%
!! AGTAAAATAATTTCGTAGTT+TGG - chr4.1:19371531-19371550 MS.gene051333:intron 20.0%
!! ATAATTCACAATTATTGACA+TGG + chr4.1:19373278-19373297 None:intergenic 20.0%
!! ATATTTCATATGAAGAGTAA+TGG + chr4.1:19367772-19367791 None:intergenic 20.0%
!! ATGAAACAAACAGAATATTA+AGG + chr4.1:19370262-19370281 None:intergenic 20.0%
!! ATTACTCTTCATATGAAATA+TGG - chr4.1:19367771-19367790 MS.gene051333:CDS 20.0%
!! ATTGCATAATTTATATGTCT+TGG - chr4.1:19373523-19373542 MS.gene051333:CDS 20.0%
!! CAAGAAATTGATATAAAAGA+GGG + chr4.1:19367884-19367903 None:intergenic 20.0%
!! CAGAGAATTATATATTAGTT+AGG + chr4.1:19371176-19371195 None:intergenic 20.0%
!! CTAACAAATTACTAATTGAA+AGG + chr4.1:19370971-19370990 None:intergenic 20.0%
!! TACTAGAGATAATTATTCAA+TGG - chr4.1:19368653-19368672 MS.gene051333:intron 20.0%
!! TATTTCATATGAAGAGTAAT+GGG + chr4.1:19367771-19367790 None:intergenic 20.0%
!! TCAAATAGAACAAAAAACAT+AGG + chr4.1:19372946-19372965 None:intergenic 20.0%
!! TCATTAAGCAAATATTTGAT+AGG - chr4.1:19370589-19370608 MS.gene051333:intron 20.0%
!!! ACTATGTTTCATTTTTTTGA+AGG - chr4.1:19371134-19371153 MS.gene051333:intron 20.0%
!!! ATAAATTTTGGATTTGATTG+AGG + chr4.1:19372880-19372899 None:intergenic 20.0%
!!! ATAGATAATAATCTCTAGAA+GGG + chr4.1:19373094-19373113 None:intergenic 20.0%
!!! CTTAAAAAAAAGTATACTAG+TGG + chr4.1:19369954-19369973 None:intergenic 20.0%
!!! CTTTCAATTAGTAATTTGTT+AGG - chr4.1:19370969-19370988 MS.gene051333:intron 20.0%
!!! GTAAGTTATACAATTGTTTT+CGG - chr4.1:19370370-19370389 MS.gene051333:intron 20.0%
!!! GTAATATTTTTTTTTGCCAA+TGG - chr4.1:19371584-19371603 MS.gene051333:intron 20.0%
!!! GTTTAAGATTTTGAGATAAT+TGG - chr4.1:19371331-19371350 MS.gene051333:intron 20.0%
!!! TTTTTATTGCAAAATGTTAG+TGG - chr4.1:19368919-19368938 MS.gene051333:CDS 20.0%
! AACTGATTAATTGACTAAAC+AGG - chr4.1:19368057-19368076 MS.gene051333:intron 25.0%
! AAGAAGAAGAATAAAAACTC+TGG + chr4.1:19369234-19369253 None:intergenic 25.0%
! AATATCCGATTATGCTTTAT+TGG - chr4.1:19369854-19369873 MS.gene051333:intron 25.0%
! ACTGATTAATTGACTAAACA+GGG - chr4.1:19368058-19368077 MS.gene051333:intron 25.0%
! AGATAGAAAATATTTGAGTC+AGG + chr4.1:19370062-19370081 None:intergenic 25.0%
! ATACAGAAATTGAACTGAAA+AGG - chr4.1:19373498-19373517 MS.gene051333:CDS 25.0%
! ATCTTTGTAAATTGTTCACA+AGG + chr4.1:19373553-19373572 None:intergenic 25.0%
! GAAACAAAATGCATAAATAC+AGG + chr4.1:19371645-19371664 None:intergenic 25.0%
! GAAGAAGATAAAAAGAGATT+GGG + chr4.1:19371249-19371268 None:intergenic 25.0%
! GATAGAAAATATTTGAGTCA+GGG + chr4.1:19370061-19370080 None:intergenic 25.0%
! GATAGAAACGAAAATAATAG+GGG + chr4.1:19373303-19373322 None:intergenic 25.0%
! GTCTAGGTTAAATTCAAATT+AGG + chr4.1:19372099-19372118 None:intergenic 25.0%
! GTGATATAAATCAAGAATTG+AGG - chr4.1:19369595-19369614 MS.gene051333:intron 25.0%
! GTTAGTGGTTAATTTATCAA+GGG - chr4.1:19368934-19368953 MS.gene051333:CDS 25.0%
! TACAGAAATTGAACTGAAAA+GGG - chr4.1:19373499-19373518 MS.gene051333:CDS 25.0%
! TATATGCATCTTTATGTGTT+TGG - chr4.1:19372596-19372615 MS.gene051333:intron 25.0%
! TATTCTGTTTGTTTCATTTC+AGG - chr4.1:19370265-19370284 MS.gene051333:intron 25.0%
! TCTTTGTAAATTGTTCACAA+GGG + chr4.1:19373552-19373571 None:intergenic 25.0%
! TGAAGAAGATAAAAAGAGAT+TGG + chr4.1:19371250-19371269 None:intergenic 25.0%
! TGTTAGTGGTTAATTTATCA+AGG - chr4.1:19368933-19368952 MS.gene051333:CDS 25.0%
! TTGAAGAAATACTACAAAAG+AGG - chr4.1:19369395-19369414 MS.gene051333:intron 25.0%
! TTGGTACAACAAATATTTCA+TGG - chr4.1:19372509-19372528 MS.gene051333:intron 25.0%
! TTGTGAACAATTTACAAAGA+TGG - chr4.1:19373552-19373571 MS.gene051333:CDS 25.0%
! TTTATACTATAAGAACCTCT+AGG - chr4.1:19372134-19372153 MS.gene051333:intron 25.0%
!! AAAAAGAATTTTTGTCCAAG+AGG - chr4.1:19372726-19372745 MS.gene051333:CDS 25.0%
!! AAAGGATTAAATACCCATTT+TGG + chr4.1:19368020-19368039 None:intergenic 25.0%
!! AAGGAATATTTTCACTTCTA+TGG + chr4.1:19370952-19370971 None:intergenic 25.0%
!! AATCTCTTTTTATCTTCTTC+AGG - chr4.1:19371249-19371268 MS.gene051333:intron 25.0%
!! ATATCCGATTATGCTTTATT+GGG - chr4.1:19369855-19369874 MS.gene051333:intron 25.0%
!! GAATCTGAAATGAAATGAAA+AGG + chr4.1:19368609-19368628 None:intergenic 25.0%
!! GCAAATAATATTTTACCTAG+AGG + chr4.1:19372152-19372171 None:intergenic 25.0%
!! TAGTTAGCCTCTTAAAAAAA+AGG + chr4.1:19368038-19368057 None:intergenic 25.0%
!! TGGTTTATTATGCATTTTTG+TGG - chr4.1:19371604-19371623 MS.gene051333:intron 25.0%
!! TTTGTTATCTTCATAGGAAA+GGG - chr4.1:19369639-19369658 MS.gene051333:intron 25.0%
!!! AAAGTTTTTTCTGCTTTTCT+AGG + chr4.1:19368861-19368880 None:intergenic 25.0%
!!! ACAAGCTTCATTTTAGTTTT+GGG - chr4.1:19371882-19371901 MS.gene051333:CDS 25.0%
!!! ATTTTTAATTTTGACCAACC+AGG - chr4.1:19370856-19370875 MS.gene051333:intron 25.0%
!!! GCTTAAGCTTTTAGAATAAT+TGG - chr4.1:19371556-19371575 MS.gene051333:intron 25.0%
!!! GTATTTATGCATTTTGTTTC+TGG - chr4.1:19371645-19371664 MS.gene051333:CDS 25.0%
!!! TTAGTAATTTGTTAGGACTT+AGG - chr4.1:19370976-19370995 MS.gene051333:intron 25.0%
!!! TTTTGTTATCTTCATAGGAA+AGG - chr4.1:19369638-19369657 MS.gene051333:intron 25.0%
AAAATTGTGAGGACCAAAAT+GGG - chr4.1:19368004-19368023 MS.gene051333:intron 30.0%
AAAGATTGTGAGTATCTAAG+TGG - chr4.1:19371671-19371690 MS.gene051333:CDS 30.0%
AAATTGATCCTGAATTGTCA+AGG - chr4.1:19368368-19368387 MS.gene051333:intron 30.0%
AAGCATTTACAATTTCTTCC+CGG + chr4.1:19370731-19370750 None:intergenic 30.0%
ACAACAACAAATTCTACTGT+AGG + chr4.1:19369425-19369444 None:intergenic 30.0%
ACACCGATAATTGATTGATT+TGG - chr4.1:19373236-19373255 MS.gene051333:intron 30.0%
ACCCCAAATCAATCAATTAT+CGG + chr4.1:19373242-19373261 None:intergenic 30.0%
AGGAGCTGATTAAGAATAAA+GGG - chr4.1:19371027-19371046 MS.gene051333:intron 30.0%
ATAAACAATCCTTTCAGAAG+AGG + chr4.1:19372486-19372505 None:intergenic 30.0%
ATAAGTTTGGTAAGTTTCCT+AGG - chr4.1:19370127-19370146 MS.gene051333:intron 30.0%
ATATAAAATCCACACGAAAG+TGG + chr4.1:19370521-19370540 None:intergenic 30.0%
CAGTTGAACTGCAAAATATT+AGG + chr4.1:19373344-19373363 None:intergenic 30.0%
CTTGGTTTCTACAGAATTAA+AGG - chr4.1:19372547-19372566 MS.gene051333:intron 30.0%
GAAGAAATTGTAAATGCTTG+TGG - chr4.1:19370732-19370751 MS.gene051333:intron 30.0%
GATCTATTTAGCTGTACTTA+TGG - chr4.1:19369254-19369273 MS.gene051333:intron 30.0%
GATTGTGAATGTAAATGTGA+GGG - chr4.1:19367963-19367982 MS.gene051333:intron 30.0%
GTTAACAATATTAGTACTCC+TGG - chr4.1:19371925-19371944 MS.gene051333:CDS 30.0%
GTTGAATAGGATAGGTAAAT+AGG - chr4.1:19371067-19371086 MS.gene051333:intron 30.0%
TAAAACAAGACAACGTGTAT+TGG + chr4.1:19368747-19368766 None:intergenic 30.0%
TAAACAATCCTTTCAGAAGA+GGG + chr4.1:19372485-19372504 None:intergenic 30.0%
TAAGCAAATATTTGATAGGC+TGG - chr4.1:19370593-19370612 MS.gene051333:intron 30.0%
TACTGTGAAATATCTTCAAG+AGG - chr4.1:19372830-19372849 MS.gene051333:CDS 30.0%
TAGGAGCTGATTAAGAATAA+AGG - chr4.1:19371026-19371045 MS.gene051333:intron 30.0%
TCAAATTATATTCAGCACAC+TGG - chr4.1:19369744-19369763 MS.gene051333:intron 30.0%
TCTTGAAGATATTTCACAGT+AGG + chr4.1:19372831-19372850 None:intergenic 30.0%
TGAAAGGATTGTTTATGGTT+TGG - chr4.1:19372490-19372509 MS.gene051333:intron 30.0%
TGATTCTCCATTCTTTACTT+CGG - chr4.1:19368504-19368523 MS.gene051333:intron 30.0%
TGATTGTGAATGTAAATGTG+AGG - chr4.1:19367962-19367981 MS.gene051333:intron 30.0%
TGGAAAGAAACTAAGCAATT+GGG + chr4.1:19371792-19371811 None:intergenic 30.0%
TGGTTAATTTATCAAGGGTA+GGG - chr4.1:19368939-19368958 MS.gene051333:CDS 30.0%
TTAATCACCTGATGAAGAAA+AGG + chr4.1:19370927-19370946 None:intergenic 30.0%
TTACAATATTCCTGCATGTT+TGG - chr4.1:19367904-19367923 MS.gene051333:intron 30.0%
TTCACCCAATAAAGCATAAT+CGG + chr4.1:19369862-19369881 None:intergenic 30.0%
TTTGAAGAATAGATTGGCAA+CGG + chr4.1:19371421-19371440 None:intergenic 30.0%
! AACCTGTTTGAAATCATCAT+TGG + chr4.1:19368575-19368594 None:intergenic 30.0%
! AAGTGATGGTTAACTTTTCA+CGG + chr4.1:19371766-19371785 None:intergenic 30.0%
! ACAAAAAACATAGGTTTTCC+AGG + chr4.1:19372937-19372956 None:intergenic 30.0%
! AGTAGGTCTGAAATTTACAA+TGG + chr4.1:19372814-19372833 None:intergenic 30.0%
! AGTATAAAAGCACACATATG+CGG + chr4.1:19370021-19370040 None:intergenic 30.0%
! ATGTTGTCAATTTTCAGCTA+AGG - chr4.1:19368120-19368139 MS.gene051333:intron 30.0%
! ATTTGAACCTTTTCTTCATC+AGG - chr4.1:19370917-19370936 MS.gene051333:CDS 30.0%
! CACCGATAATTGATTGATTT+GGG - chr4.1:19373237-19373256 MS.gene051333:intron 30.0%
! GTGTGGATTTTATATTTGTG+CGG - chr4.1:19370526-19370545 MS.gene051333:CDS 30.0%
! TCATGTCAAAAACATTTTCC+AGG + chr4.1:19373442-19373461 None:intergenic 30.0%
! TCTTCTGAAAGGATTGTTTA+TGG - chr4.1:19372485-19372504 MS.gene051333:intron 30.0%
!! AAAGGGAATTTTGAGTAGTT+AGG - chr4.1:19371044-19371063 MS.gene051333:intron 30.0%
!! AAGGGAATTTTGAGTAGTTA+GGG - chr4.1:19371045-19371064 MS.gene051333:intron 30.0%
!! ACCGATAATTGATTGATTTG+GGG - chr4.1:19373238-19373257 MS.gene051333:intron 30.0%
!! TAGATAGTACACTTTGGAAT+CGG - chr4.1:19372450-19372469 MS.gene051333:intron 30.0%
!!! CACAAGCTTCATTTTAGTTT+TGG - chr4.1:19371881-19371900 MS.gene051333:CDS 30.0%
!!! TCTCTGTTTTTGATACAGTT+GGG - chr4.1:19371190-19371209 MS.gene051333:intron 30.0%
!!! TTCTCTGTTTTTGATACAGT+TGG - chr4.1:19371189-19371208 MS.gene051333:intron 30.0%
AAAACATCAGACAGTGTGAT+TGG - chr4.1:19368684-19368703 MS.gene051333:CDS 35.0%
AAAAGAAATCTCACTGTCTC+AGG - chr4.1:19370198-19370217 MS.gene051333:intron 35.0%
AAAATAGTAAGCAGACAACC+AGG + chr4.1:19371946-19371965 None:intergenic 35.0%
AACTTACCAAACTTATCAGG+AGG + chr4.1:19370123-19370142 None:intergenic 35.0%
AAGACAAAGAAGAAAACGAG+TGG - chr4.1:19367571-19367590 MS.gene051333:CDS 35.0%
AAGCAAGAAAGAAGTAGGAT+AGG - chr4.1:19369349-19369368 MS.gene051333:intron 35.0%
AAGGAGTTACATGCATAGAT+AGG - chr4.1:19371106-19371125 MS.gene051333:CDS 35.0%
ACAAACAAATGTGCAAGAGA+AGG - chr4.1:19372325-19372344 MS.gene051333:intron 35.0%
ACATATGGTGAGAAAGAGAA+GGG + chr4.1:19367842-19367861 None:intergenic 35.0%
ACCTTCTAGATAGTACACTT+TGG - chr4.1:19372444-19372463 MS.gene051333:intron 35.0%
AGAAAATATTTGAGTCAGGG+AGG + chr4.1:19370058-19370077 None:intergenic 35.0%
AGCATTTACAATTTCTTCCC+GGG + chr4.1:19370730-19370749 None:intergenic 35.0%
AGGAAAACTTCAACATCAGA+AGG + chr4.1:19368445-19368464 None:intergenic 35.0%
AGTACACAACCTAGAGTATA+TGG - chr4.1:19372683-19372702 MS.gene051333:CDS 35.0%
AGTTACATGCATAGATAGGA+AGG - chr4.1:19371110-19371129 MS.gene051333:CDS 35.0%
ATCTCCTTTCTCTTGGTAAA+TGG - chr4.1:19370223-19370242 MS.gene051333:intron 35.0%
ATTGATATAAAAGAGGGACC+TGG + chr4.1:19367878-19367897 None:intergenic 35.0%
CAAACTTCACCATATACTCT+AGG + chr4.1:19372695-19372714 None:intergenic 35.0%
CAAGGAAGGGTTATTTAATC+TGG - chr4.1:19369914-19369933 MS.gene051333:intron 35.0%
CAATAAATCCTAAACTCGCA+AGG + chr4.1:19369156-19369175 None:intergenic 35.0%
CACCAAATGAATCTAAGAAC+TGG + chr4.1:19372256-19372275 None:intergenic 35.0%
CAGATTAAATAACCCTTCCT+TGG + chr4.1:19369916-19369935 None:intergenic 35.0%
CAGTTCTTAGATTCATTTGG+TGG - chr4.1:19372254-19372273 MS.gene051333:intron 35.0%
CATCTTCAAAAGCAGATTCT+AGG + chr4.1:19373418-19373437 None:intergenic 35.0%
CCTTTATGAACAGTGGTTTA+GGG - chr4.1:19371383-19371402 MS.gene051333:intron 35.0%
CTCCAATGATGATTTCAAAC+AGG - chr4.1:19368570-19368589 MS.gene051333:intron 35.0%
CTTCTTTCTTGCTTTGACAA+TGG + chr4.1:19369343-19369362 None:intergenic 35.0%
GAAAATTGTGAGGACCAAAA+TGG - chr4.1:19368003-19368022 MS.gene051333:intron 35.0%
GAAAGAAACTAAGCAATTGG+GGG + chr4.1:19371790-19371809 None:intergenic 35.0%
GAGTATATGGTGAAGTTTGA+TGG - chr4.1:19372696-19372715 MS.gene051333:CDS 35.0%
GGAAACTTACCAAACTTATC+AGG + chr4.1:19370126-19370145 None:intergenic 35.0%
GGAAAGAAACTAAGCAATTG+GGG + chr4.1:19371791-19371810 None:intergenic 35.0%
GGGTGAATTTCTTCTATTGA+TGG - chr4.1:19369875-19369894 MS.gene051333:intron 35.0%
GGTTAATTTATCAAGGGTAG+GGG - chr4.1:19368940-19368959 MS.gene051333:CDS 35.0%
GTCTTGAAGATTGTAGTGAT+TGG - chr4.1:19368314-19368333 MS.gene051333:intron 35.0%
GTGGAAAGAAACTAAGCAAT+TGG + chr4.1:19371793-19371812 None:intergenic 35.0%
GTGGTTAATTTATCAAGGGT+AGG - chr4.1:19368938-19368957 MS.gene051333:CDS 35.0%
GTGTCTATTATGGTGAGATT+AGG + chr4.1:19368178-19368197 None:intergenic 35.0%
GTTACCATTTACCAAGAGAA+AGG + chr4.1:19370230-19370249 None:intergenic 35.0%
TAAATGTGAGGGACCAAATT+GGG - chr4.1:19367974-19367993 MS.gene051333:intron 35.0%
TACCTAGCAAGTTCATTCTT+AGG + chr4.1:19369507-19369526 None:intergenic 35.0%
TACTACAAATCCAAACATGC+AGG + chr4.1:19367917-19367936 None:intergenic 35.0%
TAGTTAGGGTTGAATAGGAT+AGG - chr4.1:19371059-19371078 MS.gene051333:intron 35.0%
TCAACTTACACAATTACGCT+AGG - chr4.1:19371007-19371026 MS.gene051333:intron 35.0%
TCAAGAAGTGGAATGATCAA+TGG + chr4.1:19369543-19369562 None:intergenic 35.0%
TCATGATATGTTCTTGACCA+AGG - chr4.1:19369801-19369820 MS.gene051333:intron 35.0%
TCCAAAGTGTACTATCTAGA+AGG + chr4.1:19372448-19372467 None:intergenic 35.0%
TCGTAAAAATAGGGCAATAC+AGG - chr4.1:19368225-19368244 MS.gene051333:intron 35.0%
TGCGGGTTCAAATCAAATAT+TGG + chr4.1:19370003-19370022 None:intergenic 35.0%
TGGACAGATAAGTAAACTAG+TGG + chr4.1:19369983-19370002 None:intergenic 35.0%
TGGCATACGAGAATATTTCT+TGG - chr4.1:19372529-19372548 MS.gene051333:intron 35.0%
TGTCAAAGCAAGAAAGAAGT+AGG - chr4.1:19369344-19369363 MS.gene051333:intron 35.0%
TGTGATTGTTTCGACTAAGT+TGG - chr4.1:19368393-19368412 MS.gene051333:intron 35.0%
TTAAATAACCCTTCCTTGGT+AGG + chr4.1:19369912-19369931 None:intergenic 35.0%
TTACCAGATGAGCGAATAAA+TGG - chr4.1:19370295-19370314 MS.gene051333:CDS 35.0%
TTCCATGATGTCTAACTCTT+TGG - chr4.1:19373590-19373609 MS.gene051333:CDS 35.0%
TTGAGTAGTTAGGGTTGAAT+AGG - chr4.1:19371054-19371073 MS.gene051333:intron 35.0%
TTGTAATTACCACTTTCGTG+TGG - chr4.1:19370509-19370528 MS.gene051333:CDS 35.0%
TTTCTTCTTTGTCTTGGAGT+TGG + chr4.1:19367566-19367585 None:intergenic 35.0%
! AATTTTCTCGCTACCCAATT+TGG + chr4.1:19367990-19368009 None:intergenic 35.0%
! ACTCGTTTTCTTCTTTGTCT+TGG + chr4.1:19367572-19367591 None:intergenic 35.0%
! AGGTTAGCTGGTTAGTTAAA+AGG - chr4.1:19371087-19371106 MS.gene051333:intron 35.0%
! ATAAATGGAGGTGCATTTGT+TGG - chr4.1:19370310-19370329 MS.gene051333:CDS 35.0%
! ATCCTAAGAATGAACTTGCT+AGG - chr4.1:19369502-19369521 MS.gene051333:CDS 35.0%
! ATGATGGAACAAACTACTCT+AGG - chr4.1:19370769-19370788 MS.gene051333:intron 35.0%
! CCTGAAATTGAAGCTTGTTT+GGG - chr4.1:19372651-19372670 MS.gene051333:CDS 35.0%
! CTGTTTGAAATCATCATTGG+AGG + chr4.1:19368572-19368591 None:intergenic 35.0%
! GAATTTCGTTTTGTAGTTGG+AGG - chr4.1:19370684-19370703 MS.gene051333:intron 35.0%
! GCTGAATTTCGTTTTGTAGT+TGG - chr4.1:19370681-19370700 MS.gene051333:intron 35.0%
! GTATAAAAGCACACATATGC+GGG + chr4.1:19370020-19370039 None:intergenic 35.0%
! TGGATTTTATATTTGTGCGG+AGG - chr4.1:19370529-19370548 MS.gene051333:CDS 35.0%
! TTGTGTAATTGCTGTTGCAA+AGG - chr4.1:19370884-19370903 MS.gene051333:CDS 35.0%
! TTTCGACTAAGTTGGATACT+AGG - chr4.1:19368401-19368420 MS.gene051333:intron 35.0%
!! AGTTATGTCGCTTTCTTTCA+CGG + chr4.1:19369123-19369142 None:intergenic 35.0%
!! TAGAATCTCTAAGATACCGA+AGG + chr4.1:19369047-19369066 None:intergenic 35.0%
!! TTACAGGTATTAGCTTGTGA+GGG + chr4.1:19370354-19370373 None:intergenic 35.0%
!!! ACTACCAACTTTTTAGAGTC+GGG - chr4.1:19372220-19372239 MS.gene051333:intron 35.0%
!!! CACTACCAACTTTTTAGAGT+CGG - chr4.1:19372219-19372238 MS.gene051333:intron 35.0%
!!! CTCTGTTTTTGATACAGTTG+GGG - chr4.1:19371191-19371210 MS.gene051333:intron 35.0%
ACAATTTCTTCCCGGGTAAT+TGG + chr4.1:19370723-19370742 None:intergenic 40.0%
ACACTAAAGGAGTTGTGTGT+AGG + chr4.1:19369000-19369019 None:intergenic 40.0%
ACCAATCTGCAACTTTCACT+GGG - chr4.1:19373461-19373480 MS.gene051333:CDS 40.0%
AGCAAAGCAGCATGGAAAAA+TGG + chr4.1:19371976-19371995 None:intergenic 40.0%
AGTGGGATCATTACAAGCAT+TGG + chr4.1:19372291-19372310 None:intergenic 40.0%
ATAAAAGAGGGACCTGGATT+TGG + chr4.1:19367872-19367891 None:intergenic 40.0%
ATATTGAAGCTGAGAATGCC+AGG - chr4.1:19368083-19368102 MS.gene051333:intron 40.0%
ATCACAGTCCTTGACAATTC+AGG + chr4.1:19368379-19368398 None:intergenic 40.0%
ATCCTTCTCTGTAGAATGCA+GGG - chr4.1:19370619-19370638 MS.gene051333:intron 40.0%
ATCTTCACACAAGAGCTTGA+AGG + chr4.1:19371494-19371513 None:intergenic 40.0%
ATTAGAACTCCTACCAAGGA+AGG - chr4.1:19369900-19369919 MS.gene051333:intron 40.0%
CACCAAAGAGTTAGACATCA+TGG + chr4.1:19373595-19373614 None:intergenic 40.0%
CATGATGTCTAACTCTTTGG+TGG - chr4.1:19373593-19373612 MS.gene051333:CDS 40.0%
CCCAAACAAGCTTCAATTTC+AGG + chr4.1:19372654-19372673 None:intergenic 40.0%
CCCTAAACCACTGTTCATAA+AGG + chr4.1:19371386-19371405 None:intergenic 40.0%
CGCCAGTTCTTAGATTCATT+TGG - chr4.1:19372251-19372270 MS.gene051333:intron 40.0%
CTCATGGTCTCTACACAATA+AGG - chr4.1:19372036-19372055 MS.gene051333:intron 40.0%
GACATATGGTGAGAAAGAGA+AGG + chr4.1:19367843-19367862 None:intergenic 40.0%
GATAGAAGATGTTGCATCCT+TGG - chr4.1:19369300-19369319 MS.gene051333:intron 40.0%
GATCATTCCACTTCTTGAGA+AGG - chr4.1:19369545-19369564 MS.gene051333:intron 40.0%
GCCTTTATGAACAGTGGTTT+AGG - chr4.1:19371382-19371401 MS.gene051333:intron 40.0%
GCTTCAATTTCAGGCAAGAA+AGG + chr4.1:19372645-19372664 None:intergenic 40.0%
GGAGTTGAAGACATTCATGA+TGG - chr4.1:19370753-19370772 MS.gene051333:intron 40.0%
GGATAGGTAAATAGGTTAGC+TGG - chr4.1:19371075-19371094 MS.gene051333:intron 40.0%
GGATATTAGAACTCCTACCA+AGG - chr4.1:19369896-19369915 MS.gene051333:intron 40.0%
GTAAATGTGAGGGACCAAAT+TGG - chr4.1:19367973-19367992 MS.gene051333:intron 40.0%
TAAAAGAGGGACCTGGATTT+GGG + chr4.1:19367871-19367890 None:intergenic 40.0%
TAGTCCTGGTGTGTCTATTA+TGG + chr4.1:19368188-19368207 None:intergenic 40.0%
TATCCTTCTCTGTAGAATGC+AGG - chr4.1:19370618-19370637 MS.gene051333:intron 40.0%
TATCTTCATAGGAAAGGGCA+GGG - chr4.1:19369644-19369663 MS.gene051333:intron 40.0%
TCAATTTCAGGCAAGAAAGG+AGG + chr4.1:19372642-19372661 None:intergenic 40.0%
TCAGAAGGACGTGAAAATTG+TGG + chr4.1:19368430-19368449 None:intergenic 40.0%
TCAGAGAGGAGATAACAAGA+CGG + chr4.1:19367813-19367832 None:intergenic 40.0%
TCAGGATATCTCCTTTCTCT+TGG - chr4.1:19370216-19370235 MS.gene051333:intron 40.0%
TCATGATTTCATTCGACGTG+TGG + chr4.1:19371812-19371831 None:intergenic 40.0%
TCTTCACACAAGAGCTTGAA+GGG + chr4.1:19371493-19371512 None:intergenic 40.0%
TCTTCCTTTCTCCTTCAACT+TGG + chr4.1:19369776-19369795 None:intergenic 40.0%
TGCACAATATCATCGAGCAA+TGG - chr4.1:19370659-19370678 MS.gene051333:intron 40.0%
TGCACCAGGTCGTAAAAATA+GGG - chr4.1:19368216-19368235 MS.gene051333:intron 40.0%
TGCAGTAGCAGTTGTATTCA+GGG - chr4.1:19369174-19369193 MS.gene051333:CDS 40.0%
TGTGATAGAACAGTTGCAGT+GGG + chr4.1:19372308-19372327 None:intergenic 40.0%
TTAGAACTCCTACCAAGGAA+GGG - chr4.1:19369901-19369920 MS.gene051333:intron 40.0%
TTAGCTGTACTTATGGATGC+AGG - chr4.1:19369261-19369280 MS.gene051333:intron 40.0%
TTATCCACAAATGAGAGCCT+AGG + chr4.1:19370147-19370166 None:intergenic 40.0%
TTATCTTCATAGGAAAGGGC+AGG - chr4.1:19369643-19369662 MS.gene051333:intron 40.0%
TTGCAGTAGCAGTTGTATTC+AGG - chr4.1:19369173-19369192 MS.gene051333:CDS 40.0%
TTGTGATAGAACAGTTGCAG+TGG + chr4.1:19372309-19372328 None:intergenic 40.0%
! AAGACAACGTGTATTGGCAA+TGG + chr4.1:19368741-19368760 None:intergenic 40.0%
! ACACTTGATGGATGCATTCT+TGG - chr4.1:19368481-19368500 MS.gene051333:intron 40.0%
! ACAGAGTGTCATACAAGTCT+AGG + chr4.1:19372115-19372134 None:intergenic 40.0%
! AGCTGTCATTGCTGCTTAAA+GGG - chr4.1:19370085-19370104 MS.gene051333:intron 40.0%
! CTGAGCTTTACTTCTAGTTG+TGG + chr4.1:19372362-19372381 None:intergenic 40.0%
! CTTTATGTGTTTGGTGACTC+TGG - chr4.1:19372605-19372624 MS.gene051333:intron 40.0%
! GCCTGAAATTGAAGCTTGTT+TGG - chr4.1:19372650-19372669 MS.gene051333:CDS 40.0%
! GTGGTTTAGGGTTTGATTCT+TGG - chr4.1:19371395-19371414 MS.gene051333:intron 40.0%
! TCAATTCTATCGGTTACTGC+TGG - chr4.1:19368820-19368839 MS.gene051333:CDS 40.0%
!! AAGCTTTGTTTCAGCTGTCT+GGG + chr4.1:19372420-19372439 None:intergenic 40.0%
!! ATAGTACACTTTGGAATCGG+AGG - chr4.1:19372453-19372472 MS.gene051333:intron 40.0%
!! ATCTGCTTTTGAAGATGACC+TGG - chr4.1:19373421-19373440 MS.gene051333:CDS 40.0%
!! CATAGCGTTGATTGGTGAAT+TGG + chr4.1:19369083-19369102 None:intergenic 40.0%
!! CGACTCTAAAAAGTTGGTAG+TGG + chr4.1:19372221-19372240 None:intergenic 40.0%
!! CTTACAGGTATTAGCTTGTG+AGG + chr4.1:19370355-19370374 None:intergenic 40.0%
!! TCATATGAAGAGTAATGGGC+CGG + chr4.1:19367767-19367786 None:intergenic 40.0%
!! TTCACGGCATGATTTTTCAG+TGG + chr4.1:19371750-19371769 None:intergenic 40.0%
!! TTTCAGCACATAGCGTTGAT+TGG + chr4.1:19369091-19369110 None:intergenic 40.0%
!!! ATTGCCCTATTTTTACGACC+TGG + chr4.1:19368223-19368242 None:intergenic 40.0%
AAATAGGGCAATACAGGCAC+AGG - chr4.1:19368231-19368250 MS.gene051333:intron 45.0%
AATGCAGGGATGCGTCTTTA+TGG - chr4.1:19370633-19370652 MS.gene051333:intron 45.0%
AATTTGCATTACAACGCGCC+TGG + chr4.1:19368353-19368372 None:intergenic 45.0%
AGAAGATGTTGCATCCTTGG+AGG - chr4.1:19369303-19369322 MS.gene051333:intron 45.0%
AGAAGTAAAGCTCAGTCACG+TGG - chr4.1:19372367-19372386 MS.gene051333:intron 45.0%
AGACCATGAGACATATCGTG+TGG + chr4.1:19372026-19372045 None:intergenic 45.0%
AGCAATTACACAAGCAGTCC+TGG + chr4.1:19370877-19370896 None:intergenic 45.0%
AGTTGTGTGTAGGAGGTTTG+AGG + chr4.1:19368990-19369009 None:intergenic 45.0%
ATCCCTGCATTCTACAGAGA+AGG + chr4.1:19370624-19370643 None:intergenic 45.0%
ATGCAGGGATGCGTCTTTAT+GGG - chr4.1:19370634-19370653 MS.gene051333:intron 45.0%
ATTACACAAGCAGTCCTGGT+TGG + chr4.1:19370873-19370892 None:intergenic 45.0%
ATTTCTTCCCGGGTAATTGG+AGG + chr4.1:19370720-19370739 None:intergenic 45.0%
CACACATGCAACATAGCTTC+AGG - chr4.1:19373041-19373060 MS.gene051333:CDS 45.0%
CAGTAGCAGTTGTATTCAGG+GGG - chr4.1:19369176-19369195 MS.gene051333:CDS 45.0%
CATAAGCAGAAAGAGCCTCT+TGG + chr4.1:19372744-19372763 None:intergenic 45.0%
CCAATCTGCAACTTTCACTG+GGG - chr4.1:19373462-19373481 MS.gene051333:CDS 45.0%
CCAGATGAGCGAATAAATGG+AGG - chr4.1:19370298-19370317 MS.gene051333:CDS 45.0%
CCTCCATTTATTCGCTCATC+TGG + chr4.1:19370301-19370320 None:intergenic 45.0%
CTAAAGGAGTTGTGTGTAGG+AGG + chr4.1:19368997-19369016 None:intergenic 45.0%
CTCACCATAATAGACACACC+AGG - chr4.1:19368181-19368200 MS.gene051333:intron 45.0%
CTGAAGCTATGTTGCATGTG+TGG + chr4.1:19373043-19373062 None:intergenic 45.0%
CTGCACCAGGTCGTAAAAAT+AGG - chr4.1:19368215-19368234 MS.gene051333:intron 45.0%
CTTCTTTGTCTTGGAGTTGG+TGG + chr4.1:19367563-19367582 None:intergenic 45.0%
GACAGCTGAAACAAAGCTTG+CGG - chr4.1:19372421-19372440 MS.gene051333:intron 45.0%
GACCAATCTGCAACTTTCAC+TGG - chr4.1:19373460-19373479 MS.gene051333:CDS 45.0%
GAGAGAGCCTTTATGAACAG+TGG - chr4.1:19371376-19371395 MS.gene051333:intron 45.0%
GCAGGCAACTTATCCACAAT+GGG + chr4.1:19373380-19373399 None:intergenic 45.0%
GCAGTAGCAGTTGTATTCAG+GGG - chr4.1:19369175-19369194 MS.gene051333:CDS 45.0%
GCATCCTTGGAGGAGAAATT+GGG - chr4.1:19369313-19369332 MS.gene051333:intron 45.0%
GGATAGGTGTGAGCAAACTT+AGG - chr4.1:19369365-19369384 MS.gene051333:intron 45.0%
GGATTCTGCAAAGTTGTCGA+AGG + chr4.1:19371729-19371748 None:intergenic 45.0%
GGGGCGAATGTTATTAGTAG+AGG - chr4.1:19368959-19368978 MS.gene051333:CDS 45.0%
GTTTCCTAGGCTCTCATTTG+TGG - chr4.1:19370140-19370159 MS.gene051333:intron 45.0%
TATCCACAATGGGCATCAAG+AGG + chr4.1:19373370-19373389 None:intergenic 45.0%
TCGTGCAAAAATGCAGCACA+AGG - chr4.1:19368276-19368295 MS.gene051333:intron 45.0%
TGAGTATCTAAGTGGCCATC+AGG - chr4.1:19371679-19371698 MS.gene051333:CDS 45.0%
TGCAGGCAACTTATCCACAA+TGG + chr4.1:19373381-19373400 None:intergenic 45.0%
TGCATCCTTGGAGGAGAAAT+TGG - chr4.1:19369312-19369331 MS.gene051333:intron 45.0%
TGGGTAGCGAGAAAATTGTG+AGG - chr4.1:19367993-19368012 MS.gene051333:intron 45.0%
TGTGCTTGAATCAGTTCCAG+AGG + chr4.1:19372393-19372412 None:intergenic 45.0%
TTTCCTCTTGATGCCCATTG+TGG - chr4.1:19373364-19373383 MS.gene051333:CDS 45.0%
TTTCTTCCCGGGTAATTGGA+GGG + chr4.1:19370719-19370738 None:intergenic 45.0%
! ACTGGATGAAGCCAAGTTGA+AGG - chr4.1:19369762-19369781 MS.gene051333:intron 45.0%
! ATAGCTTCAGGTTCAGCACA+AGG - chr4.1:19373053-19373072 MS.gene051333:CDS 45.0%
! ATTCTATCGGTTACTGCTGG+TGG - chr4.1:19368823-19368842 MS.gene051333:CDS 45.0%
! CACTTCTTGAGAAGGAGCAT+CGG - chr4.1:19369553-19369572 MS.gene051333:intron 45.0%
! CAGCTGTCATTGCTGCTTAA+AGG - chr4.1:19370084-19370103 MS.gene051333:intron 45.0%
! GAAGCCAAGTTGAAGGAGAA+AGG - chr4.1:19369769-19369788 MS.gene051333:intron 45.0%
! GCCTTAGTTGAGGCTCTAAT+GGG - chr4.1:19367702-19367721 MS.gene051333:intron 45.0%
!! CAAGCTTTGTTTCAGCTGTC+TGG + chr4.1:19372421-19372440 None:intergenic 45.0%
!! GAAGGCACCGAAGTAAAGAA+TGG + chr4.1:19368514-19368533 None:intergenic 45.0%
!! TGGTGGTTTTGCAGATCAAG+AGG - chr4.1:19373610-19373629 MS.gene051333:CDS 45.0%
!! TTCTTTACTTCGGTGCCTTC+TGG - chr4.1:19368514-19368533 MS.gene051333:intron 45.0%
!!! CTATTTTTACGACCTGGTGC+AGG + chr4.1:19368217-19368236 None:intergenic 45.0%
!! ATAATAATAATAATAATACA+AGG + chr4.1:19373134-19373153 None:intergenic 5.0%
!! TATATAAAAAATAATAATGA+TGG + chr4.1:19369470-19369489 None:intergenic 5.0%
!!! TATAAATAATTTTTTAAAAG+GGG + chr4.1:19370443-19370462 None:intergenic 5.0%
AAGACGGAGACTCGCAATGA+GGG + chr4.1:19367797-19367816 None:intergenic 50.0%
AAGCAATTGGGGGCAAGTGA+TGG + chr4.1:19371780-19371799 None:intergenic 50.0%
ATAAGTTGCCTGCACGCCTT+CGG - chr4.1:19373387-19373406 MS.gene051333:CDS 50.0%
ATTGGAGCAACGCAACTACC+AGG - chr4.1:19368332-19368351 MS.gene051333:intron 50.0%
CATCCATCAAGTGTAGACGC+AGG + chr4.1:19368475-19368494 None:intergenic 50.0%
CCAGAACCAACTCTTCCAGA+AGG + chr4.1:19368532-19368551 None:intergenic 50.0%
CCCCAGTGAAAGTTGCAGAT+TGG + chr4.1:19373465-19373484 None:intergenic 50.0%
CCTAAACTCGCAAGGATCCA+GGG + chr4.1:19369148-19369167 None:intergenic 50.0%
CCTTCCCAATTTCTCCTCCA+AGG + chr4.1:19369320-19369339 None:intergenic 50.0%
CCTTGGAGGAGAAATTGGGA+AGG - chr4.1:19369317-19369336 MS.gene051333:intron 50.0%
CGATGCTCCTTCTCAAGAAG+TGG + chr4.1:19369555-19369574 None:intergenic 50.0%
GAAAGCGACATAACTAGCCC+TGG - chr4.1:19369128-19369147 MS.gene051333:intron 50.0%
GAGAAGGGTCATCATCAGAG+AGG + chr4.1:19367827-19367846 None:intergenic 50.0%
GCACCACACGATATGTCTCA+TGG - chr4.1:19372020-19372039 MS.gene051333:intron 50.0%
GCCCATTAGAGCCTCAACTA+AGG + chr4.1:19367706-19367725 None:intergenic 50.0%
GGATTTGGGAGAGGGACATA+TGG + chr4.1:19367857-19367876 None:intergenic 50.0%
GTGAGGGAACTGAACACCAT+CGG + chr4.1:19370338-19370357 None:intergenic 50.0%
TATGTCCCTCTCCCAAATCC+AGG - chr4.1:19367857-19367876 MS.gene051333:intron 50.0%
TCAAGTGCCCTCCAATTACC+CGG - chr4.1:19370709-19370728 MS.gene051333:intron 50.0%
TCCTAAACTCGCAAGGATCC+AGG + chr4.1:19369149-19369168 None:intergenic 50.0%
TCGGTAGAAACATCAGAGCC+TGG - chr4.1:19372916-19372935 MS.gene051333:CDS 50.0%
TGAAGCTGAGAATGCCAGGT+TGG - chr4.1:19368087-19368106 MS.gene051333:intron 50.0%
TGCAAAGTTGTCGAAGGCAG+AGG + chr4.1:19371723-19371742 None:intergenic 50.0%
TGCAGGGATGCGTCTTTATG+GGG - chr4.1:19370635-19370654 MS.gene051333:intron 50.0%
! CCTGCCCGACTCTAAAAAGT+TGG + chr4.1:19372227-19372246 None:intergenic 50.0%
! CCTTCTGGAAGAGTTGGTTC+TGG - chr4.1:19368529-19368548 MS.gene051333:intron 50.0%
! CGCCTTAGTTGAGGCTCTAA+TGG - chr4.1:19367701-19367720 MS.gene051333:intron 50.0%
! CTTTGTTTCAGCTGTCTGGG+TGG + chr4.1:19372417-19372436 None:intergenic 50.0%
! GGCATGGGTTGAGACACTAA+AGG + chr4.1:19369013-19369032 None:intergenic 50.0%
!! TATGAAGAGTAATGGGCCGG+CGG + chr4.1:19367764-19367783 None:intergenic 50.0%
!!! CCAACTTTTTAGAGTCGGGC+AGG - chr4.1:19372224-19372243 MS.gene051333:intron 50.0%
AAGGAGTAGCCCAGTGGCAT+GGG + chr4.1:19369028-19369047 None:intergenic 55.0%
AATACAGGCACAGGCACGAG+CGG - chr4.1:19368240-19368259 MS.gene051333:intron 55.0%
ACATGAGTCACGCTCCAACC+TGG + chr4.1:19368104-19368123 None:intergenic 55.0%
AGCAGTTGTATTCAGGGGGC+TGG - chr4.1:19369180-19369199 MS.gene051333:CDS 55.0%
AGGGACCTGGATTTGGGAGA+GGG + chr4.1:19367865-19367884 None:intergenic 55.0%
AGTGTCTCAACCCATGCCAC+TGG - chr4.1:19369015-19369034 MS.gene051333:intron 55.0%
ATACCGAAGGAGTAGCCCAG+TGG + chr4.1:19369034-19369053 None:intergenic 55.0%
ATGCCACTGGGCTACTCCTT+CGG - chr4.1:19369028-19369047 MS.gene051333:intron 55.0%
CAAGACGGAGACTCGCAATG+AGG + chr4.1:19367798-19367817 None:intergenic 55.0%
CAAGTGCCCTCCAATTACCC+GGG - chr4.1:19370710-19370729 MS.gene051333:intron 55.0%
CAGATTCTAGGTCCTCCCGA+AGG + chr4.1:19373406-19373425 None:intergenic 55.0%
CCACCTGCGTCTACACTTGA+TGG - chr4.1:19368469-19368488 MS.gene051333:intron 55.0%
CCATCAAGTGTAGACGCAGG+TGG + chr4.1:19368472-19368491 None:intergenic 55.0%
CCCTGGATCCTTGCGAGTTT+AGG - chr4.1:19369145-19369164 MS.gene051333:intron 55.0%
CTGCAGATGCATGGAGGACT+TGG - chr4.1:19371994-19372013 MS.gene051333:intron 55.0%
GCAGGGATGCGTCTTTATGG+GGG - chr4.1:19370636-19370655 MS.gene051333:intron 55.0%
GCATCTGCAGCAAAGCAGCA+TGG + chr4.1:19371984-19372003 None:intergenic 55.0%
GCTTTGCTGCAGATGCATGG+AGG - chr4.1:19371988-19372007 MS.gene051333:intron 55.0%
GGCTTCCAGTTCAACCACGT+CGG - chr4.1:19367723-19367742 MS.gene051333:CDS 55.0%
GGCTTGCACCCTCTTCTGAA+AGG - chr4.1:19372474-19372493 MS.gene051333:intron 55.0%
GTCGCGCCTCCTGATAAGTT+TGG - chr4.1:19370114-19370133 MS.gene051333:intron 55.0%
GTGTCTCAACCCATGCCACT+GGG - chr4.1:19369016-19369035 MS.gene051333:intron 55.0%
GTTACTGCTGGTGGCATGCA+AGG - chr4.1:19368832-19368851 MS.gene051333:CDS 55.0%
TAAGTTGCCTGCACGCCTTC+GGG - chr4.1:19373388-19373407 MS.gene051333:CDS 55.0%
TTCCAGTTCAACCACGTCGG+TGG - chr4.1:19367726-19367745 MS.gene051333:CDS 55.0%
! GCTGCTTTGCTGCAGATGCA+TGG - chr4.1:19371985-19372004 MS.gene051333:intron 55.0%
! TCGGTGCCTTCTGGAAGAGT+TGG - chr4.1:19368523-19368542 MS.gene051333:intron 55.0%
!! ATGAAGAGTAATGGGCCGGC+GGG + chr4.1:19367763-19367782 None:intergenic 55.0%
!! GGTGCATTTGTTGGTGCCGA+TGG - chr4.1:19370319-19370338 MS.gene051333:CDS 55.0%
AAGCTCAGTCACGTGGCCTC+TGG - chr4.1:19372374-19372393 MS.gene051333:intron 60.0%
AGGCGCTCTTCCCGTCTGTT+TGG + chr4.1:19367686-19367705 None:intergenic 60.0%
CACCACCGACGTGGTTGAAC+TGG + chr4.1:19367731-19367750 None:intergenic 60.0%
CACGCCTGAGGAACACCTGA+TGG + chr4.1:19371697-19371716 None:intergenic 60.0%
CAGTTCAACCACGTCGGTGG+TGG - chr4.1:19367729-19367748 MS.gene051333:CDS 60.0%
CGCTCTTCCCGTCTGTTTGG+TGG + chr4.1:19367683-19367702 None:intergenic 60.0%
GAAGGAGTAGCCCAGTGGCA+TGG + chr4.1:19369029-19369048 None:intergenic 60.0%
GAGGGACCTGGATTTGGGAG+AGG + chr4.1:19367866-19367885 None:intergenic 60.0%
GGTGCAGGAGCAACTAGTCC+TGG + chr4.1:19368202-19368221 None:intergenic 60.0%
GTGGCCATCAGGTGTTCCTC+AGG - chr4.1:19371690-19371709 MS.gene051333:intron 60.0%
GTGTAGACGCAGGTGGCGAA+AGG + chr4.1:19368465-19368484 None:intergenic 60.0%
! TGGTGGGCCACCAAACAGAC+GGG - chr4.1:19367673-19367692 MS.gene051333:intron 60.0%
!! AGGAGCATCGGAGCGTGACA+AGG - chr4.1:19369565-19369584 MS.gene051333:intron 60.0%
!! CGGGAAGAGCGCCTTAGTTG+AGG - chr4.1:19367692-19367711 MS.gene051333:intron 60.0%
!! GGACTAGTTGCTCCTGCACC+AGG - chr4.1:19368202-19368221 MS.gene051333:intron 60.0%
!! GTGGTGGGCCACCAAACAGA+CGG - chr4.1:19367672-19367691 MS.gene051333:intron 60.0%
!!! AGTAATGGGCCGGCGGGTTT+TGG + chr4.1:19367757-19367776 None:intergenic 60.0%
!!! TTTTGGTGCCACCACCGACG+TGG + chr4.1:19367740-19367759 None:intergenic 60.0%
AGGCAGAGGCAACACGCCTG+AGG + chr4.1:19371709-19371728 None:intergenic 65.0%
GTGGTGGCACCAAAACCCGC+CGG - chr4.1:19367745-19367764 MS.gene051333:CDS 65.0%
TCACACGCCTTTCGACGCGC+CGG - chr4.1:19367641-19367660 MS.gene051333:intron 65.0%
AGCACAGCCGGCGCGTCGAA+AGG + chr4.1:19367651-19367670 None:intergenic 70.0%
GTTGCCTGCACGCCTTCGGG+AGG - chr4.1:19373391-19373410 MS.gene051333:CDS 70.0%
TGGCCCACCACCAGCACAGC+CGG + chr4.1:19367663-19367682 None:intergenic 70.0%
! AGGTCCTCCCGAAGGCGTGC+AGG + chr4.1:19373398-19373417 None:intergenic 70.0%
!! TTTCGACGCGCCGGCTGTGC+TGG - chr4.1:19367650-19367669 MS.gene051333:intron 70.0%
!! GCGCCGGCTGTGCTGGTGGT+GGG - chr4.1:19367657-19367676 MS.gene051333:intron 75.0%
!!! CGACGCGCCGGCTGTGCTGG+TGG - chr4.1:19367653-19367672 MS.gene051333:intron 80.0%
!!! CGCGCCGGCTGTGCTGGTGG+TGG - chr4.1:19367656-19367675 MS.gene051333:intron 80.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 19367540 19373689 19367540 ID=MS.gene051333
chr4.1 mRNA 19367540 19373689 19367540 ID=MS.gene051333.t1;Parent=MS.gene051333
chr4.1 exon 19373351 19373689 19373351 ID=MS.gene051333.t1.exon1;Parent=MS.gene051333.t1
chr4.1 CDS 19373351 19373689 19373351 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19372638 19373150 19372638 ID=MS.gene051333.t1.exon2;Parent=MS.gene051333.t1
chr4.1 CDS 19372638 19373150 19372638 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19371813 19371946 19371813 ID=MS.gene051333.t1.exon3;Parent=MS.gene051333.t1
chr4.1 CDS 19371813 19371946 19371813 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19371613 19371705 19371613 ID=MS.gene051333.t1.exon4;Parent=MS.gene051333.t1
chr4.1 CDS 19371613 19371705 19371613 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19371407 19371470 19371407 ID=MS.gene051333.t1.exon5;Parent=MS.gene051333.t1
chr4.1 CDS 19371407 19371470 19371407 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19371094 19371142 19371094 ID=MS.gene051333.t1.exon6;Parent=MS.gene051333.t1
chr4.1 CDS 19371094 19371142 19371094 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19370860 19370942 19370860 ID=MS.gene051333.t1.exon7;Parent=MS.gene051333.t1
chr4.1 CDS 19370860 19370942 19370860 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19370439 19370596 19370439 ID=MS.gene051333.t1.exon8;Parent=MS.gene051333.t1
chr4.1 CDS 19370439 19370596 19370439 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19370291 19370351 19370291 ID=MS.gene051333.t1.exon9;Parent=MS.gene051333.t1
chr4.1 CDS 19370291 19370351 19370291 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19369959 19370021 19369959 ID=MS.gene051333.t1.exon10;Parent=MS.gene051333.t1
chr4.1 CDS 19369959 19370021 19369959 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19369458 19369558 19369458 ID=MS.gene051333.t1.exon11;Parent=MS.gene051333.t1
chr4.1 CDS 19369458 19369558 19369458 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19369172 19369229 19369172 ID=MS.gene051333.t1.exon12;Parent=MS.gene051333.t1
chr4.1 CDS 19369172 19369229 19369172 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19368661 19368993 19368661 ID=MS.gene051333.t1.exon13;Parent=MS.gene051333.t1
chr4.1 CDS 19368661 19368993 19368661 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19367709 19367873 19367709 ID=MS.gene051333.t1.exon14;Parent=MS.gene051333.t1
chr4.1 CDS 19367709 19367873 19367709 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
chr4.1 exon 19367540 19367605 19367540 ID=MS.gene051333.t1.exon15;Parent=MS.gene051333.t1
chr4.1 CDS 19367540 19367605 19367540 ID=cds.MS.gene051333.t1;Parent=MS.gene051333.t1
Gene Sequence

>MS.gene051333

ATGGAGGAAGAAACAGAGCACCACCAACTCCAAGACAAAGAAGAAAACGAGTGGCGTCTCTACGAAGCTTACAATGAACTTCACGCGCTTGCTCAAGAACTTCACACGCCTTTCGACGCGCCGGCTGTGCTGGTGGTGGGCCACCAAACAGACGGGAAGAGCGCCTTAGTTGAGGCTCTAATGGGCTTCCAGTTCAACCACGTCGGTGGTGGCACCAAAACCCGCCGGCCCATTACTCTTCATATGAAATATGGCCCTCATTGCGAGTCTCCGTCTTGTTATCTCCTCTCTGATGATGACCCTTCTCTTTCTCACCATATGTCCCTCTCCCAAATCCAGGTCCCTCTTTTATATCAATTTCTTGTTACAATATTCCTGCATGTTTGGATTTGTAGTAGTGACTTTGACTGAATTATCATGAGTGATTGTGAATGTAAATGTGAGGGACCAAATTGGGTAGCGAGAAAATTGTGAGGACCAAAATGGGTATTTAATCCTTTTTTTTAAGAGGCTAACTAACTGATTAATTGACTAAACAGGGTTATATTGAAGCTGAGAATGCCAGGTTGGAGCGTGACTCATGTTGTCAATTTTCAGCTAAGGAAATAATAATAAAAGTGGAATACAAATACTGTCCTAATCTCACCATAATAGACACACCAGGACTAGTTGCTCCTGCACCAGGTCGTAAAAATAGGGCAATACAGGCACAGGCACGAGCGGTAGAGTCACTCGTTCGTGCAAAAATGCAGCACAAGGAGTTCATTATACTCTGTCTTGAAGATTGTAGTGATTGGAGCAACGCAACTACCAGGCGCGTTGTAATGCAAATTGATCCTGAATTGTCAAGGACTGTGATTGTTTCGACTAAGTTGGATACTAGGATACCACAATTTTCACGTCCTTCTGATGTTGAAGTTTTCCTTTCGCCACCTGCGTCTACACTTGATGGATGCATTCTTGGTGATTCTCCATTCTTTACTTCGGTGCCTTCTGGAAGAGTTGGTTCTGGAACTCATTGTTTATACTCCTCCAATGATGATTTCAAACAGGTTCATTACTTAAACCTTTTCATTTCATTTCAGATTCAAAGCTTCATGCTTAGATAGTAGATACTAGAGATAATTATTCAATGGTTAAAAGTAAAACATCAGACAGTGTGATTGGCAAAGATAGACAAACAAAACAATTACGCGTGCCATTGCCAATACACGTTGTCTTGTTTTATTTTATGCTATAAATGAATTATTATGCTTTTTTAGTAGATAGTATAGTTTAATTCAATTCTATCGGTTACTGCTGGTGGCATGCAAGGAATCCTAGAAAAGCAGAAAAAACTTTCTATGTGCTGCACTCAACTTGTTAGAGATTTTTTTTTTTTTTTATTGCAAAATGTTAGTGGTTAATTTATCAAGGGTAGGGGCGAATGTTATTAGTAGAGGTTGAACCTCAAACCTCCTACACACAACTCCTTTAGTGTCTCAACCCATGCCACTGGGCTACTCCTTCGGTATCTTAGAGATTCTATTTTTTTACTTATCCAATTCACCAATCAACGCTATGTGCTGAAAAGCTTTCATCCGTGAAAGAAAGCGACATAACTAGCCCTGGATCCTTGCGAGTTTAGGATTTATTGCAGTAGCAGTTGTATTCAGGGGGCTGGCAATTTTAATTTGTAGAATGTGAAATAACCAGAGTTTTTATTCTTCTTCTTGATCTATTTAGCTGTACTTATGGATGCAGGCAGTAAGCTTCAGAGAGATAGAAGATGTTGCATCCTTGGAGGAGAAATTGGGAAGGCCATTGTCAAAGCAAGAAAGAAGTAGGATAGGTGTGAGCAAACTTAGGTTGTTTCTTGAAGAAATACTACAAAAGAGGTTTACCTACAGTAGAATTTGTTGTTGTTTCTTGACAATAATTAGTAAATCCATCATTATTATTTTTTATATATTCTATAGCTAAATCCTAAGAATGAACTTGCTAGGTATATAAATAATGTACCATTGATCATTCCACTTCTTGAGAAGGAGCATCGGAGCGTGACAAGGAAATTGAGTGATATAAATCAAGAATTGAGGTTTGTATTAAGTTAGAAATATTTTGTTATCTTCATAGGAAAGGGCAGGGTTGATACTTGATAATTTTATGTATTGATATTATTGTTATCTTTGAATGTATTTGTTTCATCACTTGTATATTCTTCTTCAAATTATATTCAGCACACTGGATGAAGCCAAGTTGAAGGAGAAAGGAAGAGCTTTTCATGATATGTTCTTGACCAAGGTTTTAATATCACAAATTCAATTTTCTTCTCAATATCCGATTATGCTTTATTGGGTGAATTTCTTCTATTGATGGATATTAGAACTCCTACCAAGGAAGGGTTATTTAATCTGGTTGTTTAACGTGTGCCACTAGTATACTTTTTTTTAAGAAAGTGCCACTAGTTTACTTATCTGTCCAATATTTGATTTGAACCCGCATATGTGTGCTTTTATACTTTATTATGTGTCTTCCTCCCTGACTCAAATATTTTCTATCTTTCAGCTGTCATTGCTGCTTAAAGGGACAGTTGTCGCGCCTCCTGATAAGTTTGGTAAGTTTCCTAGGCTCTCATTTGTGGATAAGCTTAACGAATAGTAGATAATGCTCAATGAAAAAAGAAATCTCACTGTCTCAGGATATCTCCTTTCTCTTGGTAAATGGTAACTGTTATATTCCTTAATATTCTGTTTGTTTCATTTCAGGTGAAACATTACCAGATGAGCGAATAAATGGAGGTGCATTTGTTGGTGCCGATGGTGTTCAGTTCCCTCACAAGCTAATACCTGTAAGTTATACAATTGTTTTCGGCTTGTTTTTCTCAGTACTTACATTCTACTCATTTTATTATATTGTCTCCCCTTTTAAAAAATTATTTATAATTTTTTTTTTCTTTTCTTTTGGTTGATGACTCATTTAACTTATGCTTGTAATTACCACTTTCGTGTGGATTTTATATTTGTGCGGAGGTTCATGCACTGAAAGCTTTTGAAGTATTTTCAGAATCTCATTAAGCAAATATTTGATAGGCTGGTTTATCCTTCTCTGTAGAATGCAGGGATGCGTCTTTATGGGGGTGCACAATATCATCGAGCAATGGCTGAATTTCGTTTTGTAGTTGGAGGAATCAAGTGCCCTCCAATTACCCGGGAAGAAATTGTAAATGCTTGTGGAGTTGAAGACATTCATGATGGAACAAACTACTCTAGGTAATTCTGTGTGCTCTACTTATTCATTCTTGTAATAATATTTACTCATTTTTTAACATTAAAATATTTTTAATTTTGACCAACCAGGACTGCTTGTGTAATTGCTGTTGCAAAGGCTCATGATACATTTGAACCTTTTCTTCATCAGGTGATTAATACCATAGAAGTGAAAATATTCCTTTCAATTAGTAATTTGTTAGGACTTAGGATTACAAGTCAACTTACACAATTACGCTAGGAGCTGATTAAGAATAAAGGGAATTTTGAGTAGTTAGGGTTGAATAGGATAGGTAAATAGGTTAGCTGGTTAGTTAAAAGGAGTTACATGCATAGATAGGAAGGCACTATGTTTCATTTTTTTGAAGGTTTAATGTTTTGCTTCCCTAACTAATATATAATTCTCTGTTTTTGATACAGTTGGGGTCTAGATTGTTGCACATACTTAAGAGATTGCTCCCAATCTCTTTTTATCTTCTTCAGGTATTCTCGTTGTATTCTTTTGTGAGATATAAAACTATTTTTTATTTTTTACATCAGATAGTTTAAGATTTTGAGATAATTGGTTCTTGACATGCATCAAGATTCGAGAGAGCCTTTATGAACAGTGGTTTAGGGTTTGATTCTTGGCCGTTGCCAATCTATTCTTCAAAATTAAAGTTGAATTTCTGTACAAATTAGTATGAACGTGTTCGTTGTCTACCCTTCAAGCTCTTGTGTGAAGATTTGTACAATACAGTATTAGTAAAATAATTTCGTAGTTTGGCAGCTTAAGCTTTTAGAATAATTGGTTCTTGTAATATTTTTTTTTGCCAATGGTTTATTATGCATTTTTGTGGAAATCTTCTGACACTCCTGTATTTATGCATTTTGTTTCTGGCAGAAAGATTGTGAGTATCTAAGTGGCCATCAGGTGTTCCTCAGGCGTGTTGCCTCTGCCTTCGACAACTTTGCAGAATCCACTGAAAAATCATGCCGTGAAAAGTTAACCATCACTTGCCCCCAATTGCTTAGTTTCTTTCCACACGTCGAATGAAATCATGAGTCTTTTGTTCTAAAAAAAAACTGAAACTGAAATAACAAACAAAAACATCACAAGCTTCATTTTAGTTTTGGGCGAATTGTATTGACTTCGCTGTTAACAATATTAGTACTCCTGGTTGTCTGCTTACTATTTTCTAAATGCCATTTTTCCATGCTGCTTTGCTGCAGATGCATGGAGGACTTGGTAAGCACCACACGATATGTCTCATGGTCTCTACACAATAAGGTAATCTTTGAAATGCTGCATTTTAAATGATCTAACTTCCTAATTTGAATTTAACCTAGACTTGTATGACACTCTGTTTATACTATAAGAACCTCTAGGTAAAATATTATTTGCAAAGCTACGTCTTTCTTGCTCGTTTCTTTTCTTATATCTGATTCTGCCACTACCAACTTTTTAGAGTCGGGCAGGATTACGCCAGTTCTTAGATTCATTTGGTGGAACAGAACATTCCAATGCTTGTAATGATCCCACTGCAACTGTTCTATCACAAACAAATGTGCAAGAGAAGGAAGACACAAAGCCACAACTAGAAGTAAAGCTCAGTCACGTGGCCTCTGGAACTGATTCAAGCACATCCACCCAGACAGCTGAAACAAAGCTTGCGGACCTTCTAGATAGTACACTTTGGAATCGGAGGCTTGCACCCTCTTCTGAAAGGATTGTTTATGGTTTGGTACAACAAATATTTCATGGCATACGAGAATATTTCTTGGTTTCTACAGAATTAAAGGTTTGAAATGTTTATTGTTTGTTTATGTATATGCATCTTTATGTGTTTGGTGACTCTGGTCTGCAAATTACCTCCTTTCTTGCCTGAAATTGAAGCTTGTTTGGGTTTAAGTACAGTACACAACCTAGAGTATATGGTGAAGTTTGATGGCTATTTAAAAAAGAATTTTTGTCCAAGAGGCTCTTTCTGCTTATGCGTTATGACAATGATATCATAAGAGAAAAATATCTTCAAAATTAAAGCCATTGTAAATTTCAGACCTACTGTGAAATATCTTCAAGAGGCTCTCTACTTTTTTCTGTTCAATTCCTCAATCAAATCCAAAATTTATGAGAAAAAAATATAATTCGGTAGAAACATCAGAGCCTGGAAAACCTATGTTTTTTGTTCTATTTGAGAAAACTATGATATATTAACATAATAATTGATTTAAGGACGAGCAGTATGTGCTACATGCTAAAGTTTCATGTACCACACATGCAACATAGCTTCAGGTTCAGCACAAGGTTTCAAGTTTATTAGCCCTTCTAGAGATTATTATCTATTAGATATCATACACTATCCTTGTATTATTATTATTATTATTATTATTATTATCATTCTTTTAAATTTTATGTTTATTGTTCAGTCTGATTACAGCTGCAACACTAGAAGACAATATGTCAAAACACCGATAATTGATTGATTTGGGGTTATTATGATAAAGCCATGTCAATAATTGTGAATTATCACCCCTATTATTTTCGTTTCTATCTTTTATGCACTGCTTATACCTAATATTTTGCAGTTCAACTGTTTCCTCTTGATGCCCATTGTGGATAAGTTGCCTGCACGCCTTCGGGAGGACCTAGAATCTGCTTTTGAAGATGACCTGGAAAATGTTTTTGACATGACCAATCTGCAACTTTCACTGGGGCAACAGAAAAGAGATACAGAAATTGAACTGAAAAGGGTATTGCATAATTTATATGTCTTGGTTTCCCTTGTGAACAATTTACAAAGATGGTAATTTTCTCTTGTTTTCCATGATGTCTAACTCTTTGGTGGTTTTGCAGATCAAGAGGCTCAAAGATAAATTCAGAATGATACATGAGCAGCTAATTCTACGTCAAGCCGCTTGA
Protein sequence

>MS.gene051333.t1

MEEETEHHQLQDKEENEWRLYEAYNELHALAQELHTPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYGPHCESPSCYLLSDDDPSLSHHMSLSQIQGYIEAENARLERDSCCQFSAKEIIIKVEYKYCPNLTIIDTPGLVAPAPGRKNRAIQAQARAVESLVRAKMQHKEFIILCLEDCSDWSNATTRRVVMQIDPELSRTVIVSTKLDTRIPQFSRPSDVEVFLSPPASTLDGCILGDSPFFTSVPSGRVGSGTHCLYSSNDDFKQAVSFREIEDVASLEEKLGRPLSKQERSRIGVSKLRLFLEEILQKRYINNVPLIIPLLEKEHRSVTRKLSDINQELSTLDEAKLKEKGRAFHDMFLTKLSLLLKGTVVAPPDKFGETLPDERINGGAFVGADGVQFPHKLIPNAGMRLYGGAQYHRAMAEFRFVVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACVIAVAKAHDTFEPFLHQLGSRLLHILKRLLPISFYLLQKDCEYLSGHQVFLRRVASAFDNFAESTEKSCREKCMEDLVSTTRYVSWSLHNKSRAGLRQFLDSFGGTEHSNACNDPTATVLSQTNVQEKEDTKPQLEVKLSHVASGTDSSTSTQTAETKLADLLDSTLWNRRLAPSSERIVYGLVQQIFHGIREYFLVSTELKFNCFLLMPIVDKLPARLREDLESAFEDDLENVFDMTNLQLSLGQQKRDTEIELKRIKRLKDKFRMIHEQLILRQAA