Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70393.t1 | XP_013457218.1 | 99.1 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.00E+00 | 1490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70393.t1 | Q84N64 | 78.9 | 739 | 156 | 0 | 17 | 755 | 23 | 761 | 0.0e+00 | 1166.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70393.t1 | A0A072UN67 | 99.1 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.0e+00 | 1490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050354 | MS.gene70393 | -0.842441 | 2.58E-58 | -1.69E-46 |
| MS.gene051333 | MS.gene70393 | 0.860676 | 1.75E-63 | -1.69E-46 |
| MS.gene051564 | MS.gene70393 | 0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene051566 | MS.gene70393 | 0.815222 | 1.03E-51 | -1.69E-46 |
| MS.gene058041 | MS.gene70393 | 0.813167 | 2.93E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene70393 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene70393 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene059529 | MS.gene70393 | 0.825877 | 3.69E-54 | -1.69E-46 |
| MS.gene059530 | MS.gene70393 | 0.849215 | 3.73E-60 | -1.69E-46 |
| MS.gene060356 | MS.gene70393 | 0.802971 | 4.36E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene70393 | 0.803964 | 2.71E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70393.t1 | MTR_4g094300 | 99.080 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.0 | 1561 |
| MS.gene70393.t1 | MTR_8g463270 | 32.294 | 449 | 280 | 9 | 23 | 465 | 27 | 457 | 1.84e-58 | 213 |
| MS.gene70393.t1 | MTR_4g093750 | 30.570 | 193 | 126 | 5 | 37 | 228 | 32 | 217 | 1.25e-13 | 75.1 |
| MS.gene70393.t1 | MTR_4g093750 | 31.053 | 190 | 123 | 5 | 40 | 228 | 35 | 217 | 1.75e-13 | 74.7 |
| MS.gene70393.t1 | MTR_8g099550 | 27.723 | 202 | 135 | 5 | 30 | 228 | 21 | 214 | 1.23e-11 | 68.6 |
| MS.gene70393.t1 | MTR_2g009690 | 27.861 | 201 | 121 | 5 | 37 | 228 | 41 | 226 | 2.52e-11 | 67.8 |
| MS.gene70393.t1 | MTR_8g027675 | 26.887 | 212 | 123 | 7 | 30 | 228 | 21 | 213 | 3.30e-11 | 67.0 |
| MS.gene70393.t1 | MTR_1g032550 | 27.807 | 187 | 127 | 4 | 43 | 228 | 36 | 215 | 3.40e-11 | 67.0 |
| MS.gene70393.t1 | MTR_8g105580 | 28.342 | 187 | 125 | 4 | 43 | 228 | 36 | 214 | 3.88e-11 | 67.0 |
| MS.gene70393.t1 | MTR_8g105580 | 28.342 | 187 | 125 | 4 | 43 | 228 | 36 | 214 | 4.29e-11 | 66.6 |
| MS.gene70393.t1 | MTR_8g009510 | 28.342 | 187 | 126 | 4 | 43 | 228 | 41 | 220 | 4.89e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70393.t1 | AT3G19720 | 78.890 | 739 | 156 | 0 | 17 | 755 | 23 | 761 | 0.0 | 1206 |
| MS.gene70393.t1 | AT3G19720 | 77.267 | 739 | 132 | 1 | 17 | 755 | 23 | 725 | 0.0 | 1170 |
| MS.gene70393.t1 | AT3G19720 | 73.548 | 775 | 133 | 3 | 17 | 755 | 23 | 761 | 0.0 | 1145 |
| MS.gene70393.t1 | AT1G53140 | 29.735 | 565 | 363 | 14 | 23 | 572 | 43 | 588 | 1.14e-60 | 219 |
| MS.gene70393.t1 | AT4G33650 | 29.016 | 193 | 122 | 5 | 43 | 228 | 60 | 244 | 2.35e-12 | 71.2 |
| MS.gene70393.t1 | AT4G33650 | 29.016 | 193 | 122 | 5 | 43 | 228 | 60 | 244 | 2.41e-12 | 71.2 |
| MS.gene70393.t1 | AT1G14830 | 28.877 | 187 | 125 | 4 | 43 | 228 | 36 | 215 | 1.25e-11 | 68.6 |
| MS.gene70393.t1 | AT2G44590 | 28.877 | 187 | 125 | 4 | 43 | 228 | 36 | 215 | 1.83e-11 | 68.2 |
| MS.gene70393.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 1.95e-11 | 67.4 |
| MS.gene70393.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 2.93e-11 | 67.4 |
| MS.gene70393.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 3.48e-11 | 67.0 |
| MS.gene70393.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 3.48e-11 | 67.0 |
Find 188 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTGAAAGGATTGTTTA+TGG | 0.162341 | 4.3:-20045754 | MS.gene70393:CDS |
| CAGCTGTCATTGCTGCTTAA+AGG | 0.162593 | 4.3:-20048156 | MS.gene70393:CDS |
| CTTGGTTTCTACAGAATTAA+AGG | 0.177555 | 4.3:-20045692 | MS.gene70393:intron |
| CAAGCTTTGTTTCAGCTGTC+TGG | 0.191720 | 4.3:+20045821 | None:intergenic |
| CGCCTTAGTTGAGGCTCTTA+TGG | 0.197470 | 4.3:-20050551 | MS.gene70393:CDS |
| TGCATCCTTGGAGGAGAAAT+TGG | 0.198064 | 4.3:-20048928 | MS.gene70393:CDS |
| AATGCAGGGATGCGTCTTTA+TGG | 0.205537 | 4.3:-20047608 | MS.gene70393:CDS |
| ACAATTTCTTCCCGGGTAAT+TGG | 0.225123 | 4.3:+20047521 | None:intergenic |
| TTCTTTACTTCGGTGCCTTC+TGG | 0.270195 | 4.3:-20049730 | MS.gene70393:CDS |
| AGTAATGGGCCGGCGGGTTT+TGG | 0.273814 | 4.3:+20050498 | None:intergenic |
| ACACTTGATGGATGCATTCT+TGG | 0.281907 | 4.3:-20049763 | MS.gene70393:CDS |
| GCCTTAGTTGAGGCTCTTAT+GGG | 0.288458 | 4.3:-20050550 | MS.gene70393:CDS |
| ATTACTCTTCATATGAAATA+TGG | 0.321859 | 4.3:-20050481 | MS.gene70393:CDS |
| TTACCAGATGAGCGAATAAA+TGG | 0.323825 | 4.3:-20047945 | MS.gene70393:CDS |
| CGCGCCGGCCGTGCTGGTTG+TGG | 0.324903 | 4.3:-20050596 | MS.gene70393:CDS |
| TAAGTTGCCTGCACGCCTTC+GGG | 0.332712 | 4.3:-20044841 | MS.gene70393:CDS |
| TAGTCCTGGTGTGTCTATTA+TGG | 0.333208 | 4.3:+20050059 | None:intergenic |
| CTCATGGTCTCTACACAATA+AGG | 0.336061 | 4.3:-20046204 | MS.gene70393:intron |
| CATCTTCAAAAGCAGATTCT+AGG | 0.339798 | 4.3:+20044814 | None:intergenic |
| GGAAACTTACCAAACTTATC+AGG | 0.347296 | 4.3:+20048117 | None:intergenic |
| AGCTGTCATTGCTGCTTAAA+GGG | 0.352524 | 4.3:-20048155 | MS.gene70393:CDS |
| CGCCAGTTCTTAGATTCATT+TGG | 0.359410 | 4.3:-20045988 | MS.gene70393:CDS |
| CCACCTGCGTCTACACTTGA+TGG | 0.365304 | 4.3:-20049775 | MS.gene70393:CDS |
| CCTTCTGGAAGAGTTGGTTC+TGG | 0.366317 | 4.3:-20049715 | MS.gene70393:CDS |
| ATCACAGTCCTTGACAATTC+AGG | 0.369623 | 4.3:+20049868 | None:intergenic |
| CGCCCGTGCCTGTGCCTGTA+TGG | 0.370611 | 4.3:+20050005 | None:intergenic |
| TGAAAGGATTGTTTATGGTT+TGG | 0.374121 | 4.3:-20045749 | MS.gene70393:CDS |
| GACCAATCTGCAACTTTCAC+TGG | 0.376245 | 4.3:-20044769 | MS.gene70393:CDS |
| TTTCGACGCGCCGGCCGTGC+TGG | 0.376913 | 4.3:-20050602 | MS.gene70393:CDS |
| GATAGAAGATGTTGCATCCT+TGG | 0.381459 | 4.3:-20048940 | MS.gene70393:CDS |
| TTGGTACAACAAATATTTCA+TGG | 0.384673 | 4.3:-20045730 | MS.gene70393:CDS |
| AACCTGTTTGAAATCATCAT+TGG | 0.384824 | 4.3:+20049672 | None:intergenic |
| CTTTGTCTTGGAGTTGGAGT+TGG | 0.387030 | 4.3:+20050695 | None:intergenic |
| ATAAGTTGCCTGCACGCCTT+CGG | 0.392038 | 4.3:-20044842 | MS.gene70393:CDS |
| TGGCATACGAGAATATTTCT+TGG | 0.392689 | 4.3:-20045710 | MS.gene70393:CDS |
| CCTCCATTTATTCGCTCATC+TGG | 0.395092 | 4.3:+20047942 | None:intergenic |
| ATGCAGGGATGCGTCTTTAT+GGG | 0.398998 | 4.3:-20047607 | MS.gene70393:CDS |
| ATACAGAAATTGAACTGAAA+AGG | 0.399496 | 4.3:-20044731 | MS.gene70393:CDS |
| AGGCGCTCTTCCCGTCTGTT+TGG | 0.402265 | 4.3:+20050569 | None:intergenic |
| TTTCTTCTTTGTCTTGGAGT+TGG | 0.402277 | 4.3:+20050689 | None:intergenic |
| TTTCGACTAAGTTGGATACT+AGG | 0.408928 | 4.3:-20049843 | MS.gene70393:CDS |
| AAGCTTTGTTTCAGCTGTCT+GGG | 0.412861 | 4.3:+20045822 | None:intergenic |
| CTTCTTTCTTGCTTTGACAA+TGG | 0.414823 | 4.3:+20048900 | None:intergenic |
| AAGCATTTACAATTTCTTCC+CGG | 0.417927 | 4.3:+20047513 | None:intergenic |
| CGCTCTTCCCGTCTGTTTGG+TGG | 0.420293 | 4.3:+20050572 | None:intergenic |
| TCCAAAGTGTACTATCTAGA+AGG | 0.422812 | 4.3:+20045794 | None:intergenic |
| GCGCCGGCCGTGCTGGTTGT+GGG | 0.424580 | 4.3:-20050595 | MS.gene70393:CDS |
| AAGCTCAGTCACGTGGCCTC+TGG | 0.425374 | 4.3:-20045865 | MS.gene70393:CDS |
| CTCCAATGATGATTTCAAAC+AGG | 0.429013 | 4.3:-20049674 | MS.gene70393:intron |
| CACCACCGACGTGGTTGAAC+TGG | 0.431077 | 4.3:+20050524 | None:intergenic |
| CTGCAGATGCATGGAGGACT+TGG | 0.434256 | 4.3:-20046246 | MS.gene70393:intron |
| TTGAAGAAATACTACAAAAG+AGG | 0.443086 | 4.3:-20048845 | MS.gene70393:intron |
| GTCTTGAAGATTGTAGTGAT+TGG | 0.444388 | 4.3:-20049930 | MS.gene70393:CDS |
| GTCGCGCCTCCTGATAAGTT+TGG | 0.444868 | 4.3:-20048126 | MS.gene70393:intron |
| TGTGATTGTTTCGACTAAGT+TGG | 0.455967 | 4.3:-20049851 | MS.gene70393:CDS |
| TGAGTATCTAAGTGGCCATC+AGG | 0.457017 | 4.3:-20046560 | MS.gene70393:CDS |
| GCATCCTTGGAGGAGAAATT+GGG | 0.457953 | 4.3:-20048927 | MS.gene70393:CDS |
| TATTTCATATGAAGAGTAAT+GGG | 0.459153 | 4.3:+20050484 | None:intergenic |
| TGTCTTGGAGTTGGAGTTGG+TGG | 0.469942 | 4.3:+20050698 | None:intergenic |
| GCTGCTTTGCTGCAGATGCA+TGG | 0.473544 | 4.3:-20046255 | MS.gene70393:intron |
| TATCCTTCTCTGTAGAATGC+AGG | 0.473558 | 4.3:-20047623 | MS.gene70393:intron |
| GTGATATAAATCAAGAATTG+AGG | 0.473579 | 4.3:-20048645 | MS.gene70393:intron |
| TAGATAGTACACTTTGGAAT+CGG | 0.477027 | 4.3:-20045789 | MS.gene70393:CDS |
| TTAATCACCTGATGAAGAAA+AGG | 0.478366 | 4.3:+20047317 | None:intergenic |
| CACCAAATGAATCTAAGAAC+TGG | 0.480476 | 4.3:+20045986 | None:intergenic |
| TACAGAAATTGAACTGAAAA+GGG | 0.482398 | 4.3:-20044730 | MS.gene70393:intron |
| ACCAATCTGCAACTTTCACT+GGG | 0.486344 | 4.3:-20044768 | MS.gene70393:CDS |
| TCTTCCTTTCTCCTTCAACT+TGG | 0.486429 | 4.3:+20048467 | None:intergenic |
| AGGGACCTGGATTTGGGAAA+GGG | 0.489850 | 4.3:+20050390 | None:intergenic |
| AGGTCCTCCCGAAGGCGTGC+AGG | 0.495111 | 4.3:+20044834 | None:intergenic |
| GGCCATACAGGCACAGGCAC+GGG | 0.495586 | 4.3:-20050007 | MS.gene70393:CDS |
| CGATGCTCCTTCTCAAGAAG+TGG | 0.500444 | 4.3:+20048688 | None:intergenic |
| TGATTCTCCATTCTTTACTT+CGG | 0.501902 | 4.3:-20049740 | MS.gene70393:CDS |
| ATAAACAATCCTTTCAGAAG+AGG | 0.502061 | 4.3:+20045756 | None:intergenic |
| GGATTTGGGAAAGGGACATA+TGG | 0.507538 | 4.3:+20050398 | None:intergenic |
| GGTGCATTTGTTGGTGCCGA+TGG | 0.507607 | 4.3:-20047921 | MS.gene70393:CDS |
| TCGGTGCCTTCTGGAAGAGT+TGG | 0.507960 | 4.3:-20049721 | MS.gene70393:CDS |
| CCCCAGTGAAAGTTGCAGAT+TGG | 0.507995 | 4.3:+20044767 | None:intergenic |
| GTGGCCATCAGGTGTTCCTC+AGG | 0.508175 | 4.3:-20046549 | MS.gene70393:CDS |
| CTGAGCTTTACTTCTAGTTG+TGG | 0.513837 | 4.3:+20045880 | None:intergenic |
| TCAAATTATATTCAGCACAC+TGG | 0.515656 | 4.3:-20048496 | MS.gene70393:intron |
| AAGCAAGAAAGAAGTAGGAT+AGG | 0.516003 | 4.3:-20048891 | MS.gene70393:CDS |
| ATAAATGGAGGTGCATTTGT+TGG | 0.517617 | 4.3:-20047930 | MS.gene70393:CDS |
| AGTGGGATCATTACAAGCAT+TGG | 0.518266 | 4.3:+20045951 | None:intergenic |
| ACTGGATGAAGCCAAGTTGA+AGG | 0.521534 | 4.3:-20048478 | MS.gene70393:CDS |
| GCAGGCAACTTATCCACAAT+GGG | 0.524857 | 4.3:+20044852 | None:intergenic |
| TGGCCCACAACCAGCACGGC+CGG | 0.525548 | 4.3:+20050592 | None:intergenic |
| CAGTTCAACCACGTCGGTGG+TGG | 0.526497 | 4.3:-20050523 | MS.gene70393:CDS |
| TTTCCTCTTGATGCCCATTG+TGG | 0.528183 | 4.3:-20044865 | MS.gene70393:CDS |
| AGCACGGCCGGCGCGTCGAA+AGG | 0.528895 | 4.3:+20050604 | None:intergenic |
| ACCTTCTAGATAGTACACTT+TGG | 0.529433 | 4.3:-20045795 | MS.gene70393:CDS |
| GATCATTCCACTTCTTGAGA+AGG | 0.529630 | 4.3:-20048695 | MS.gene70393:CDS |
| TGTCAAAGCAAGAAAGAAGT+AGG | 0.531849 | 4.3:-20048896 | MS.gene70393:CDS |
| TGCAAAGTTGTCGAAGGCAG+AGG | 0.532153 | 4.3:+20046519 | None:intergenic |
| GAAGCCAAGTTGAAGGAGAA+AGG | 0.532201 | 4.3:-20048471 | MS.gene70393:CDS |
| TAAGGAAATAATAATAAAAG+TGG | 0.533072 | 4.3:-20050106 | MS.gene70393:CDS |
| ATTTCTTCCCGGGTAATTGG+AGG | 0.533870 | 4.3:+20047524 | None:intergenic |
| ATCCTTCTCTGTAGAATGCA+GGG | 0.535796 | 4.3:-20047622 | MS.gene70393:intron |
| CAGTTCTTAGATTCATTTGG+TGG | 0.536557 | 4.3:-20045985 | MS.gene70393:CDS |
| GCCCATAAGAGCCTCAACTA+AGG | 0.536655 | 4.3:+20050549 | None:intergenic |
| AGCATTTACAATTTCTTCCC+GGG | 0.538399 | 4.3:+20047514 | None:intergenic |
| GGTGCAGGAGCAACTAGTCC+TGG | 0.538725 | 4.3:+20050045 | None:intergenic |
| ATGATGGAACAAACTACTCT+AGG | 0.538851 | 4.3:-20047472 | MS.gene70393:intron |
| CCTTCCCAATTTCTCCTCCA+AGG | 0.539759 | 4.3:+20048923 | None:intergenic |
| TATGTCCCTTTCCCAAATCC+AGG | 0.542276 | 4.3:-20050395 | MS.gene70393:intron |
| TTGTGTAATTGCTGTTGCAA+AGG | 0.542310 | 4.3:-20047357 | MS.gene70393:CDS |
| GTGTCTATTATGGTGAGATT+AGG | 0.543431 | 4.3:+20050069 | None:intergenic |
| TGAAGCTGAGAATGCGAGGT+TGG | 0.543558 | 4.3:-20050157 | MS.gene70393:CDS |
| CTGTTTGAAATCATCATTGG+AGG | 0.543999 | 4.3:+20049675 | None:intergenic |
| GAAGAAATTGTAAATGCTTG+TGG | 0.544926 | 4.3:-20047509 | MS.gene70393:CDS |
| ATGAAGAGTAATGGGCCGGC+GGG | 0.546779 | 4.3:+20050492 | None:intergenic |
| GGCTTGCACCCTCTTCTGAA+AGG | 0.547455 | 4.3:-20045765 | MS.gene70393:CDS |
| TCAAGTGCCCTCCAATTACC+CGG | 0.547552 | 4.3:-20047532 | MS.gene70393:CDS |
| GAAGGCACCGAAGTAAAGAA+TGG | 0.547953 | 4.3:+20049733 | None:intergenic |
| GGACTAGTTGCTCCTGCACC+TGG | 0.550165 | 4.3:-20050042 | MS.gene70393:CDS |
| CACGCCTGAGGAACACCTGA+TGG | 0.551113 | 4.3:+20046545 | None:intergenic |
| CTTACAGGTATTAGCTTGTG+AGG | 0.551276 | 4.3:+20047888 | None:intergenic |
| TCATGATATGTTCTTGACCA+AGG | 0.556614 | 4.3:-20048439 | MS.gene70393:intron |
| AATTTGCATTACAACGCGCC+TGG | 0.559478 | 4.3:+20049894 | None:intergenic |
| GGATAGGTGTGAGCAAACTT+AGG | 0.560619 | 4.3:-20048875 | MS.gene70393:CDS |
| ATATTTCATATGAAGAGTAA+TGG | 0.564525 | 4.3:+20050483 | None:intergenic |
| GGGCCATACAGGCACAGGCA+CGG | 0.565838 | 4.3:-20050008 | MS.gene70393:CDS |
| TGCAGGGATGCGTCTTTATG+GGG | 0.567216 | 4.3:-20047606 | MS.gene70393:CDS |
| CTTTGTTTCAGCTGTCTGGG+TGG | 0.567373 | 4.3:+20045825 | None:intergenic |
| CACTTCTTGAGAAGGAGCAT+CGG | 0.568800 | 4.3:-20048687 | MS.gene70393:CDS |
| TTTCTTCCCGGGTAATTGGA+GGG | 0.576915 | 4.3:+20047525 | None:intergenic |
| CGGGAAGAGCGCCTTAGTTG+AGG | 0.577376 | 4.3:-20050560 | MS.gene70393:CDS |
| ATTGGAGCAACGCAACTACC+AGG | 0.580115 | 4.3:-20049912 | MS.gene70393:CDS |
| AAAGATTGTGAGTATCTAAG+TGG | 0.583085 | 4.3:-20046568 | MS.gene70393:CDS |
| GTTGTGGGCCACCAAACAGA+CGG | 0.583962 | 4.3:-20050580 | MS.gene70393:CDS |
| GTGTAGACGCAGGTGGCGAA+AGG | 0.584125 | 4.3:+20049782 | None:intergenic |
| ACAAACAAATGTGCAAGAGA+AGG | 0.587825 | 4.3:-20045914 | MS.gene70393:CDS |
| AAATAGGGCCATACAGGCAC+AGG | 0.587978 | 4.3:-20050013 | MS.gene70393:CDS |
| TAAACAATCCTTTCAGAAGA+GGG | 0.590872 | 4.3:+20045757 | None:intergenic |
| TGCAGGCAACTTATCCACAA+TGG | 0.590908 | 4.3:+20044851 | None:intergenic |
| GTTGCCTGCACGCCTTCGGG+AGG | 0.591678 | 4.3:-20044838 | MS.gene70393:CDS |
| AGGAGCATCGGAGCGTGACA+AGG | 0.595430 | 4.3:-20048675 | MS.gene70393:CDS |
| ATAGTACACTTTGGAATCGG+AGG | 0.596031 | 4.3:-20045786 | MS.gene70393:CDS |
| CATACAGGCACAGGCACGGG+CGG | 0.596791 | 4.3:-20050004 | MS.gene70393:CDS |
| TTACAGGTATTAGCTTGTGA+GGG | 0.597671 | 4.3:+20047889 | None:intergenic |
| TCAGAAGGACGTGAAAATTG+TGG | 0.598389 | 4.3:+20049817 | None:intergenic |
| AGGAAAACTTCAACATCAGA+AGG | 0.598510 | 4.3:+20049802 | None:intergenic |
| TCATATGAAGAGTAATGGGC+CGG | 0.598845 | 4.3:+20050488 | None:intergenic |
| TTCCAGTTCAACCACGTCGG+TGG | 0.601584 | 4.3:-20050526 | MS.gene70393:CDS |
| TTGTGGGCCACCAAACAGAC+GGG | 0.604019 | 4.3:-20050579 | MS.gene70393:CDS |
| GAGGGACCTGGATTTGGGAA+AGG | 0.604316 | 4.3:+20050389 | None:intergenic |
| AAGAAGGAGACTCGCAATGT+GGG | 0.605505 | 4.3:+20050458 | None:intergenic |
| GGAGTTGAAGACATTCATGA+TGG | 0.606200 | 4.3:-20047488 | MS.gene70393:CDS |
| AGAAGATGTTGCATCCTTGG+AGG | 0.608682 | 4.3:-20048937 | MS.gene70393:CDS |
| GACATATGGTGAGAAAGAGA+AGG | 0.609488 | 4.3:+20050412 | None:intergenic |
| AGGCAGAGGCAACACGCCTG+AGG | 0.612673 | 4.3:+20046533 | None:intergenic |
| TCACACGCCTTTCGACGCGC+CGG | 0.619278 | 4.3:-20050611 | MS.gene70393:CDS |
| CAGTGGTTCATATATTCAAG+CGG | 0.622329 | 4.3:+20044547 | None:intergenic |
| ACATATGGTGAGAAAGAGAA+GGG | 0.625084 | 4.3:+20050413 | None:intergenic |
| GTGAGGGAACTGAACACCAT+CGG | 0.625618 | 4.3:+20047905 | None:intergenic |
| TCAAGAAGTGGAATGATCAA+CGG | 0.629262 | 4.3:+20048700 | None:intergenic |
| GGATTCTGCAAAGTTGTCGA+AGG | 0.629616 | 4.3:+20046513 | None:intergenic |
| TATCCACAATGGGCATCAAG+AGG | 0.631215 | 4.3:+20044862 | None:intergenic |
| AAATTGATCCTGAATTGTCA+AGG | 0.631423 | 4.3:-20049876 | MS.gene70393:CDS |
| GCACCACACGATATGTCTCA+TGG | 0.635950 | 4.3:-20046220 | MS.gene70393:CDS |
| ATATTGAAGCTGAGAATGCG+AGG | 0.642278 | 4.3:-20050161 | MS.gene70393:CDS |
| TCAGAGAGGAGATAGCAAGA+AGG | 0.642604 | 4.3:+20050442 | None:intergenic |
| TGCACAATATCATCGAGCAA+TGG | 0.644083 | 4.3:-20047582 | MS.gene70393:CDS |
| CAAGAAGGAGACTCGCAATG+TGG | 0.644912 | 4.3:+20050457 | None:intergenic |
| AACTTACCAAACTTATCAGG+AGG | 0.646410 | 4.3:+20048120 | None:intergenic |
| TATGAAGAGTAATGGGCCGG+CGG | 0.646689 | 4.3:+20050491 | None:intergenic |
| CAAGTGCCCTCCAATTACCC+GGG | 0.652716 | 4.3:-20047531 | MS.gene70393:CDS |
| TTGGTGGCCCACAACCAGCA+CGG | 0.653038 | 4.3:+20050588 | None:intergenic |
| CCAGAACCAACTCTTCCAGA+AGG | 0.654193 | 4.3:+20049715 | None:intergenic |
| GCTTTGCTGCAGATGCATGG+AGG | 0.654747 | 4.3:-20046252 | MS.gene70393:intron |
| GCAGGGATGCGTCTTTATGG+GGG | 0.654781 | 4.3:-20047605 | MS.gene70393:CDS |
| TGTGATAGAACAGTTGCAGT+GGG | 0.655199 | 4.3:+20045934 | None:intergenic |
| TGTGCTTGAATCAGTTCCAG+AGG | 0.655564 | 4.3:+20045849 | None:intergenic |
| AGAAGTAAAGCTCAGTCACG+TGG | 0.668138 | 4.3:-20045872 | MS.gene70393:CDS |
| GGCTTCCAGTTCAACCACGT+CGG | 0.671549 | 4.3:-20050529 | MS.gene70393:CDS |
| CCATCAAGTGTAGACGCAGG+TGG | 0.674421 | 4.3:+20049775 | None:intergenic |
| TTGTGATAGAACAGTTGCAG+TGG | 0.675737 | 4.3:+20045933 | None:intergenic |
| CCAGATGAGCGAATAAATGG+AGG | 0.675913 | 4.3:-20047942 | MS.gene70393:CDS |
| CTCACCATAATAGACACACC+AGG | 0.677974 | 4.3:-20050063 | MS.gene70393:CDS |
| CATCCATCAAGTGTAGACGC+AGG | 0.679396 | 4.3:+20049772 | None:intergenic |
| GACAGCTGAAACAAAGCTTG+CGG | 0.680189 | 4.3:-20045818 | MS.gene70393:CDS |
| AAGACAAAGAAGAAAACGAG+TGG | 0.685207 | 4.3:-20050681 | MS.gene70393:CDS |
| CCTTGGAGGAGAAATTGGGA+AGG | 0.686239 | 4.3:-20048923 | MS.gene70393:CDS |
| CAGATTCTAGGTCCTCCCGA+AGG | 0.687299 | 4.3:+20044826 | None:intergenic |
| GAGAAGGGTCATCATCAGAG+AGG | 0.690656 | 4.3:+20050428 | None:intergenic |
| GTGGTGGCACCAAAACCCGC+CGG | 0.702784 | 4.3:-20050507 | MS.gene70393:CDS |
| AGACCATGAGACATATCGTG+TGG | 0.704609 | 4.3:+20046217 | None:intergenic |
| CCAATCTGCAACTTTCACTG+GGG | 0.748437 | 4.3:-20044767 | MS.gene70393:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAAATAATTTTTTAAA+AGG | + | chr4.3:20047485-20047504 | None:intergenic | 0.0% |
| !!! | TTATAAATAATTTTTTAAAA+GGG | + | chr4.3:20047484-20047503 | None:intergenic | 0.0% |
| !! | AAAGAATTATATATTAGTTA+GGG | + | chr4.3:20048214-20048233 | None:intergenic | 10.0% |
| !! | TATGAGAAAAAAATATAATT+TGG | - | chr4.3:20049944-20049963 | MS.gene70393:CDS | 10.0% |
| !!! | AAATTGATAATAAAAAAAGA+GGG | + | chr4.3:20044912-20044931 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTCTTTTCTTT+TGG | - | chr4.3:20047502-20047521 | MS.gene70393:CDS | 10.0% |
| !!! | TATTTTTTTCTCATAAATTT+TGG | + | chr4.3:20049939-20049958 | None:intergenic | 10.0% |
| !!! | TTAACATAATAATTGATTTA+AGG | - | chr4.3:20050028-20050047 | MS.gene70393:CDS | 10.0% |
| !! | ATAGTTTAATTCAATTCTAT+CGG | - | chr4.3:20045846-20045865 | MS.gene70393:CDS | 15.0% |
| !! | CAAAGAATTATATATTAGTT+AGG | + | chr4.3:20048215-20048234 | None:intergenic | 15.0% |
| !! | TAAGGAAATAATAATAAAAG+TGG | - | chr4.3:20045174-20045193 | MS.gene70393:intron | 15.0% |
| !!! | AAATATTTTGTTATCTTCAT+AGG | - | chr4.3:20046673-20046692 | MS.gene70393:intron | 15.0% |
| !!! | GAAATTGATAATAAAAAAAG+AGG | + | chr4.3:20044913-20044932 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTTTTTTGCCAA+TGG | - | chr4.3:20048625-20048644 | MS.gene70393:intron | 15.0% |
| !!! | TTTAATTTTGAAGAATAGAT+TGG | + | chr4.3:20048467-20048486 | None:intergenic | 15.0% |
| !! | AAAAATGCATAATAAACCAT+TGG | + | chr4.3:20048644-20048663 | None:intergenic | 20.0% |
| !! | AAAACAATTGTATAACTTAC+AGG | + | chr4.3:20047410-20047429 | None:intergenic | 20.0% |
| !! | AAGATAGAAAGGAAAATAAT+AGG | + | chr4.3:20050356-20050375 | None:intergenic | 20.0% |
| !! | AATAGATAATAATCTCTAGA+AGG | + | chr4.3:20050143-20050162 | None:intergenic | 20.0% |
| !! | AATTTGTGATATTAAAACCT+TGG | + | chr4.3:20046861-20046880 | None:intergenic | 20.0% |
| !! | AGATAGAAAGGAAAATAATA+GGG | + | chr4.3:20050355-20050374 | None:intergenic | 20.0% |
| !! | AGTAAAATAATTTCGTAGTT+TGG | - | chr4.3:20048571-20048590 | MS.gene70393:intron | 20.0% |
| !! | ATAATTCACAATTATTGACA+TGG | + | chr4.3:20050329-20050348 | None:intergenic | 20.0% |
| !! | ATATTTCATATGAAGAGTAA+TGG | + | chr4.3:20044800-20044819 | None:intergenic | 20.0% |
| !! | ATGAAACAAACAGAATATTA+AGG | + | chr4.3:20047302-20047321 | None:intergenic | 20.0% |
| !! | ATTACTCTTCATATGAAATA+TGG | - | chr4.3:20044799-20044818 | MS.gene70393:CDS | 20.0% |
| !! | ATTGCATAATTTATATGTCT+TGG | - | chr4.3:20050574-20050593 | MS.gene70393:CDS | 20.0% |
| !! | CTAACAAATTACTAATTGAA+AGG | + | chr4.3:20048010-20048029 | None:intergenic | 20.0% |
| !! | TACTAGAGATAATTATTCAA+TGG | - | chr4.3:20045689-20045708 | MS.gene70393:intron | 20.0% |
| !! | TATTTCATATGAAGAGTAAT+GGG | + | chr4.3:20044799-20044818 | None:intergenic | 20.0% |
| !! | TCAAATAGAACAAAAAACAT+AGG | + | chr4.3:20049993-20050012 | None:intergenic | 20.0% |
| !! | TCATTAAGCAAATATTTGAT+AGG | - | chr4.3:20047628-20047647 | MS.gene70393:intron | 20.0% |
| !! | TTATTATTGCAAAATGTTAG+TGG | - | chr4.3:20045959-20045978 | MS.gene70393:CDS | 20.0% |
| !!! | ACTATGTTTCATTTTTTTGA+AGG | - | chr4.3:20048173-20048192 | MS.gene70393:intron | 20.0% |
| !!! | ATAAATTTTGGATTTGATTG+AGG | + | chr4.3:20049927-20049946 | None:intergenic | 20.0% |
| !!! | ATAGATAATAATCTCTAGAA+GGG | + | chr4.3:20050142-20050161 | None:intergenic | 20.0% |
| !!! | CTTTAATCCTTTTTTTTTAG+AGG | - | chr4.3:20045062-20045081 | MS.gene70393:intron | 20.0% |
| !!! | CTTTCAATTAGTAATTTGTT+AGG | - | chr4.3:20048008-20048027 | MS.gene70393:intron | 20.0% |
| !!! | GTAAGTTATACAATTGTTTT+CGG | - | chr4.3:20047410-20047429 | MS.gene70393:intron | 20.0% |
| !!! | GTTTAAGATTTTGAGATAAT+TGG | - | chr4.3:20048370-20048389 | MS.gene70393:intron | 20.0% |
| !!! | TGATTAATTTTGACTAAACA+GGG | - | chr4.3:20045094-20045113 | MS.gene70393:intron | 20.0% |
| ! | AAAATTGTGAGGACTAAAAT+GGG | - | chr4.3:20045038-20045057 | MS.gene70393:intron | 25.0% |
| ! | AAGAAGAAGAATAAAAACTC+TGG | + | chr4.3:20046274-20046293 | None:intergenic | 25.0% |
| ! | ACAATATTACTGCATATGTT+TGG | - | chr4.3:20044938-20044957 | MS.gene70393:intron | 25.0% |
| ! | AGATAGAAAATATTTGAGTC+AGG | + | chr4.3:20047102-20047121 | None:intergenic | 25.0% |
| ! | ATACAGAAATTGAACTGAAA+AGG | - | chr4.3:20050549-20050568 | MS.gene70393:CDS | 25.0% |
| ! | ATCTTTGTAAATTGTTCACA+AGG | + | chr4.3:20050604-20050623 | None:intergenic | 25.0% |
| ! | GAAACAAAATGCATAAATAC+AGG | + | chr4.3:20048686-20048705 | None:intergenic | 25.0% |
| ! | GAAGAAGATAAAAAGAGATT+GGG | + | chr4.3:20048288-20048307 | None:intergenic | 25.0% |
| ! | GATAGAAAATATTTGAGTCA+GGG | + | chr4.3:20047101-20047120 | None:intergenic | 25.0% |
| ! | GATAGAAAGGAAAATAATAG+GGG | + | chr4.3:20050354-20050373 | None:intergenic | 25.0% |
| ! | GTCTAGGTTAAATTCAAATT+AGG | + | chr4.3:20049139-20049158 | None:intergenic | 25.0% |
| ! | GTGATATAAATCAAGAATTG+AGG | - | chr4.3:20046635-20046654 | MS.gene70393:intron | 25.0% |
| ! | GTTAGTGGTTAATTTATCAA+GGG | - | chr4.3:20045974-20045993 | MS.gene70393:CDS | 25.0% |
| ! | TACAGAAATTGAACTGAAAA+GGG | - | chr4.3:20050550-20050569 | MS.gene70393:CDS | 25.0% |
| ! | TATATGCATCTTTATGTGTT+TGG | - | chr4.3:20049637-20049656 | MS.gene70393:intron | 25.0% |
| ! | TATTCTGTTTGTTTCATTTC+AGG | - | chr4.3:20047305-20047324 | MS.gene70393:intron | 25.0% |
| ! | TCTTTGTAAATTGTTCACAA+GGG | + | chr4.3:20050603-20050622 | None:intergenic | 25.0% |
| ! | TGAAGAAGATAAAAAGAGAT+TGG | + | chr4.3:20048289-20048308 | None:intergenic | 25.0% |
| ! | TGTTAGTGGTTAATTTATCA+AGG | - | chr4.3:20045973-20045992 | MS.gene70393:CDS | 25.0% |
| ! | TTGAAGAAATACTACAAAAG+AGG | - | chr4.3:20046435-20046454 | MS.gene70393:intron | 25.0% |
| ! | TTGGTACAACAAATATTTCA+TGG | - | chr4.3:20049550-20049569 | MS.gene70393:intron | 25.0% |
| ! | TTGTGAACAATTTACAAAGA+TGG | - | chr4.3:20050603-20050622 | MS.gene70393:CDS | 25.0% |
| ! | TTTATACTATAAGAACCTCT+AGG | - | chr4.3:20049174-20049193 | MS.gene70393:intron | 25.0% |
| !! | AAGGAATATTTTCACTTCTA+TGG | + | chr4.3:20047991-20048010 | None:intergenic | 25.0% |
| !! | AAGTGATGATTAACTTTTCA+CGG | + | chr4.3:20048807-20048826 | None:intergenic | 25.0% |
| !! | AATCTCTTTTTATCTTCTTC+AGG | - | chr4.3:20048288-20048307 | MS.gene70393:intron | 25.0% |
| !! | CTTAAAAAAAAGCATACTAG+TGG | + | chr4.3:20046994-20047013 | None:intergenic | 25.0% |
| !! | GAATCTGAAATGAAATGAAA+GGG | + | chr4.3:20045645-20045664 | None:intergenic | 25.0% |
| !! | GCAAATAATATTTTACCTAG+AGG | + | chr4.3:20049192-20049211 | None:intergenic | 25.0% |
| !! | GTGTGGATTTTATATTTGTA+CGG | - | chr4.3:20047565-20047584 | MS.gene70393:CDS | 25.0% |
| !! | TGAATCTGAAATGAAATGAA+AGG | + | chr4.3:20045646-20045665 | None:intergenic | 25.0% |
| !! | TGGTTTATTATGCATTTTTG+TGG | - | chr4.3:20048645-20048664 | MS.gene70393:intron | 25.0% |
| !! | TTGTTAGCCTCTAAAAAAAA+AGG | + | chr4.3:20045072-20045091 | None:intergenic | 25.0% |
| !! | TTTGTTATCTTCATAGGAAA+GGG | - | chr4.3:20046679-20046698 | MS.gene70393:intron | 25.0% |
| !!! | AAAGTTTTTTCTGCTTTTCT+AGG | + | chr4.3:20045897-20045916 | None:intergenic | 25.0% |
| !!! | ACAAGCTTCATTTTAGTTTT+GGG | - | chr4.3:20048922-20048941 | MS.gene70393:CDS | 25.0% |
| !!! | ATTTTTAATTTTGACCAACC+AGG | - | chr4.3:20047895-20047914 | MS.gene70393:CDS | 25.0% |
| !!! | CTGATTAATTTTGACTAAAC+AGG | - | chr4.3:20045093-20045112 | MS.gene70393:intron | 25.0% |
| !!! | TCTTTGTTTTTGATACAGTT+GGG | - | chr4.3:20048229-20048248 | MS.gene70393:intron | 25.0% |
| !!! | TTAGTAATTTGTTAGGACTT+AGG | - | chr4.3:20048015-20048034 | MS.gene70393:intron | 25.0% |
| !!! | TTCTTTGTTTTTGATACAGT+TGG | - | chr4.3:20048228-20048247 | MS.gene70393:intron | 25.0% |
| !!! | TTTTGTTATCTTCATAGGAA+AGG | - | chr4.3:20046678-20046697 | MS.gene70393:intron | 25.0% |
| AAAGATTGTGAGTATCTAAG+TGG | - | chr4.3:20048712-20048731 | MS.gene70393:CDS | 30.0% | |
| AAATTGATCCTGAATTGTCA+AGG | - | chr4.3:20045404-20045423 | MS.gene70393:intron | 30.0% | |
| AAGCATTTACAATTTCTTCC+CGG | + | chr4.3:20047770-20047789 | None:intergenic | 30.0% | |
| ACAACAACAAATTCTACTGT+AGG | + | chr4.3:20046465-20046484 | None:intergenic | 30.0% | |
| ACACCGATAATTGATTGATT+TGG | - | chr4.3:20050287-20050306 | MS.gene70393:intron | 30.0% | |
| ACCCCAAATCAATCAATTAT+CGG | + | chr4.3:20050293-20050312 | None:intergenic | 30.0% | |
| AGCATTATCTACTATTCGTT+AGG | + | chr4.3:20047211-20047230 | None:intergenic | 30.0% | |
| AGGAGCTGATTAAGAATAAA+GGG | - | chr4.3:20048066-20048085 | MS.gene70393:intron | 30.0% | |
| AGTATACAACCTAGAGTATA+TGG | - | chr4.3:20049724-20049743 | MS.gene70393:CDS | 30.0% | |
| AGTATCCGATTATGCTTTAT+TGG | - | chr4.3:20046894-20046913 | MS.gene70393:intron | 30.0% | |
| ATAAACAATCCTTTCAGAAG+AGG | + | chr4.3:20049527-20049546 | None:intergenic | 30.0% | |
| ATAAGTTTGGTAAGTTTCCT+AGG | - | chr4.3:20047167-20047186 | MS.gene70393:intron | 30.0% | |
| ATAATAAAAAAAGAGGGACC+TGG | + | chr4.3:20044906-20044925 | None:intergenic | 30.0% | |
| ATATAAAATCCACACGAAAG+TGG | + | chr4.3:20047560-20047579 | None:intergenic | 30.0% | |
| CAATAAATCCTAAACTCACA+AGG | + | chr4.3:20046196-20046215 | None:intergenic | 30.0% | |
| CAGTTGAACTGCAAAATATT+AGG | + | chr4.3:20050395-20050414 | None:intergenic | 30.0% | |
| CTTGGTTTCTACAGAATTAA+AGG | - | chr4.3:20049588-20049607 | MS.gene70393:intron | 30.0% | |
| GAAAATTGTGAGGACTAAAA+TGG | - | chr4.3:20045037-20045056 | MS.gene70393:intron | 30.0% | |
| GAAGAAATTGTAAATGCTTG+TGG | - | chr4.3:20047771-20047790 | MS.gene70393:intron | 30.0% | |
| GATCTATTTAGCTGTACTTA+TGG | - | chr4.3:20046294-20046313 | MS.gene70393:intron | 30.0% | |
| GATTGTGAATGTAAATGTGA+GGG | - | chr4.3:20044997-20045016 | MS.gene70393:intron | 30.0% | |
| GTTAACAATATTAGTACTCC+TGG | - | chr4.3:20048965-20048984 | MS.gene70393:intron | 30.0% | |
| GTTGAATAGGTTAGGTAAAT+AGG | - | chr4.3:20048106-20048125 | MS.gene70393:intron | 30.0% | |
| TAAAACAAGACAACGTGTAT+TGG | + | chr4.3:20045783-20045802 | None:intergenic | 30.0% | |
| TAAACAATCCTTTCAGAAGA+GGG | + | chr4.3:20049526-20049545 | None:intergenic | 30.0% | |
| TAAGCAAATATTTGATAGGC+TGG | - | chr4.3:20047632-20047651 | MS.gene70393:intron | 30.0% | |
| TACTGTGAAATATCTTCAAG+AGG | - | chr4.3:20049877-20049896 | MS.gene70393:CDS | 30.0% | |
| TAGGAGCTGATTAAGAATAA+AGG | - | chr4.3:20048065-20048084 | MS.gene70393:intron | 30.0% | |
| TCAAATTATATTCAGCACAC+TGG | - | chr4.3:20046784-20046803 | MS.gene70393:intron | 30.0% | |
| TCAACTTACACAATTACGTT+AGG | - | chr4.3:20048046-20048065 | MS.gene70393:intron | 30.0% | |
| TCTTGAAGATATTTCACAGT+AGG | + | chr4.3:20049878-20049897 | None:intergenic | 30.0% | |
| TGAAAGGATTGTTTATGGTT+TGG | - | chr4.3:20049531-20049550 | MS.gene70393:intron | 30.0% | |
| TGATTCTCCATTCTTTACTT+CGG | - | chr4.3:20045540-20045559 | MS.gene70393:intron | 30.0% | |
| TGATTGTGAATGTAAATGTG+AGG | - | chr4.3:20044996-20045015 | MS.gene70393:intron | 30.0% | |
| TGGTTAATTTATCAAGGGTA+GGG | - | chr4.3:20045979-20045998 | MS.gene70393:CDS | 30.0% | |
| TTAATCACCTGATGAAGAAA+AGG | + | chr4.3:20047966-20047985 | None:intergenic | 30.0% | |
| TTCACCCAATAAAGCATAAT+CGG | + | chr4.3:20046902-20046921 | None:intergenic | 30.0% | |
| TTTGAAGAATAGATTGGCAA+CGG | + | chr4.3:20048461-20048480 | None:intergenic | 30.0% | |
| ! | AACCTGTTTGAAATCATCAT+TGG | + | chr4.3:20045611-20045630 | None:intergenic | 30.0% |
| ! | AAGAAGAATTTTTGTCCAAG+AGG | - | chr4.3:20049767-20049786 | MS.gene70393:CDS | 30.0% |
| ! | ACAAAAAACATAGGTTTTCC+AGG | + | chr4.3:20049984-20050003 | None:intergenic | 30.0% |
| ! | AGTAGGTCTGAAATTTACAA+TGG | + | chr4.3:20049861-20049880 | None:intergenic | 30.0% |
| ! | AGTATAAAAGCACACATATG+CGG | + | chr4.3:20047061-20047080 | None:intergenic | 30.0% |
| ! | ATGTTGTCAATTTTCAGCTA+AGG | - | chr4.3:20045156-20045175 | MS.gene70393:intron | 30.0% |
| ! | ATTTGAACCTTTTCTTCATC+AGG | - | chr4.3:20047956-20047975 | MS.gene70393:CDS | 30.0% |
| ! | CACCGATAATTGATTGATTT+GGG | - | chr4.3:20050288-20050307 | MS.gene70393:intron | 30.0% |
| ! | GTATCCGATTATGCTTTATT+GGG | - | chr4.3:20046895-20046914 | MS.gene70393:intron | 30.0% |
| ! | TAGAATATCTAAGATACCGA+AGG | + | chr4.3:20046087-20046106 | None:intergenic | 30.0% |
| ! | TCATGTCAAAAACATTTTCC+AGG | + | chr4.3:20050493-20050512 | None:intergenic | 30.0% |
| ! | TCTTCTGAAAGGATTGTTTA+TGG | - | chr4.3:20049526-20049545 | MS.gene70393:intron | 30.0% |
| ! | TGGATTTTATATTTGTACGG+AGG | - | chr4.3:20047568-20047587 | MS.gene70393:CDS | 30.0% |
| !! | AAAGGGAATTTTGAGTAGTT+AGG | - | chr4.3:20048083-20048102 | MS.gene70393:intron | 30.0% |
| !! | AAGGGAATTTTGAGTAGTTA+GGG | - | chr4.3:20048084-20048103 | MS.gene70393:intron | 30.0% |
| !! | ACCGATAATTGATTGATTTG+GGG | - | chr4.3:20050289-20050308 | MS.gene70393:intron | 30.0% |
| !! | TAGATAGTACACTTTGGAAT+CGG | - | chr4.3:20049491-20049510 | MS.gene70393:intron | 30.0% |
| !!! | CACAAGCTTCATTTTAGTTT+TGG | - | chr4.3:20048921-20048940 | MS.gene70393:CDS | 30.0% |
| !!! | CTTTGTTTTTGATACAGTTG+GGG | - | chr4.3:20048230-20048249 | MS.gene70393:intron | 30.0% |
| AAAACATCAGACAGTGTGAT+TGG | - | chr4.3:20045720-20045739 | MS.gene70393:CDS | 35.0% | |
| AAAAGAAATCTCACTGTCTC+AGG | - | chr4.3:20047238-20047257 | MS.gene70393:intron | 35.0% | |
| AAAATAGTAAGCAGACAACC+AGG | + | chr4.3:20048986-20049005 | None:intergenic | 35.0% | |
| AACTTACCAAACTTATCAGG+AGG | + | chr4.3:20047163-20047182 | None:intergenic | 35.0% | |
| AAGACAAAGAAGAAAACGAG+TGG | - | chr4.3:20044599-20044618 | MS.gene70393:CDS | 35.0% | |
| AAGCAAGAAAGAAGTAGGAT+AGG | - | chr4.3:20046389-20046408 | MS.gene70393:intron | 35.0% | |
| AAGGAGTTACATGCATAGAT+AGG | - | chr4.3:20048145-20048164 | MS.gene70393:CDS | 35.0% | |
| ACAAACAAATGTGCAAGAGA+AGG | - | chr4.3:20049366-20049385 | MS.gene70393:intron | 35.0% | |
| ACATATGGTGAGAAAGAGAA+GGG | + | chr4.3:20044870-20044889 | None:intergenic | 35.0% | |
| ACCTTCTAGATAGTACACTT+TGG | - | chr4.3:20049485-20049504 | MS.gene70393:intron | 35.0% | |
| AGAAAATATTTGAGTCAGGG+AGG | + | chr4.3:20047098-20047117 | None:intergenic | 35.0% | |
| AGCATTTACAATTTCTTCCC+GGG | + | chr4.3:20047769-20047788 | None:intergenic | 35.0% | |
| AGGAAAACTTCAACATCAGA+AGG | + | chr4.3:20045481-20045500 | None:intergenic | 35.0% | |
| AGTTACATGCATAGATAGGA+AGG | - | chr4.3:20048149-20048168 | MS.gene70393:CDS | 35.0% | |
| ATCTCCTTTCTCTTGGTAAA+TGG | - | chr4.3:20047263-20047282 | MS.gene70393:intron | 35.0% | |
| CAAACTTCACCATATACTCT+AGG | + | chr4.3:20049736-20049755 | None:intergenic | 35.0% | |
| CACCAAATGAATCTAAGAAC+TGG | + | chr4.3:20049297-20049316 | None:intergenic | 35.0% | |
| CAGTTCTTAGATTCATTTGG+TGG | - | chr4.3:20049295-20049314 | MS.gene70393:intron | 35.0% | |
| CATCTTCAAAAGCAGATTCT+AGG | + | chr4.3:20050469-20050488 | None:intergenic | 35.0% | |
| CTCCAATGATGATTTCAAAC+AGG | - | chr4.3:20045606-20045625 | MS.gene70393:intron | 35.0% | |
| CTTCTTTCTTGCTTTGACAA+TGG | + | chr4.3:20046383-20046402 | None:intergenic | 35.0% | |
| CTTTATGAACCAGTGGTTTA+GGG | - | chr4.3:20048423-20048442 | MS.gene70393:intron | 35.0% | |
| GAGTATATGGTGAAGTTTGA+TGG | - | chr4.3:20049737-20049756 | MS.gene70393:CDS | 35.0% | |
| GCAGTGCATAAAAGATAGAA+AGG | + | chr4.3:20050367-20050386 | None:intergenic | 35.0% | |
| GGAAACTTACCAAACTTATC+AGG | + | chr4.3:20047166-20047185 | None:intergenic | 35.0% | |
| GGGTGAATTTCTTCTATTGA+TGG | - | chr4.3:20046915-20046934 | MS.gene70393:intron | 35.0% | |
| GGTTAATTTATCAAGGGTAG+GGG | - | chr4.3:20045980-20045999 | MS.gene70393:CDS | 35.0% | |
| GTCTTGAAGATTGTAGTGAT+TGG | - | chr4.3:20045350-20045369 | MS.gene70393:intron | 35.0% | |
| GTGGTTAATTTATCAAGGGT+AGG | - | chr4.3:20045978-20045997 | MS.gene70393:CDS | 35.0% | |
| GTGTCTATTATGGTGAGATT+AGG | + | chr4.3:20045214-20045233 | None:intergenic | 35.0% | |
| GTTACCATTTACCAAGAGAA+AGG | + | chr4.3:20047270-20047289 | None:intergenic | 35.0% | |
| TAAATGTGAGGGACCAAATT+GGG | - | chr4.3:20045008-20045027 | MS.gene70393:intron | 35.0% | |
| TACCTAGCAAGTTCATTCTT+AGG | + | chr4.3:20046547-20046566 | None:intergenic | 35.0% | |
| TAGTTAGGGTTGAATAGGTT+AGG | - | chr4.3:20048098-20048117 | MS.gene70393:intron | 35.0% | |
| TCAAGAAGTGGAATGATCAA+CGG | + | chr4.3:20046583-20046602 | None:intergenic | 35.0% | |
| TCATGATATGTTCTTGACCA+AGG | - | chr4.3:20046841-20046860 | MS.gene70393:intron | 35.0% | |
| TCCAAAGTGTACTATCTAGA+AGG | + | chr4.3:20049489-20049508 | None:intergenic | 35.0% | |
| TCGACAGATAAGTAAACTAG+TGG | + | chr4.3:20047023-20047042 | None:intergenic | 35.0% | |
| TGGAAGGAAACTAAGCAATT+GGG | + | chr4.3:20048833-20048852 | None:intergenic | 35.0% | |
| TGGCATACGAGAATATTTCT+TGG | - | chr4.3:20049570-20049589 | MS.gene70393:intron | 35.0% | |
| TGTCAAAGCAAGAAAGAAGT+AGG | - | chr4.3:20046384-20046403 | MS.gene70393:intron | 35.0% | |
| TGTGATTGTTTCGACTAAGT+TGG | - | chr4.3:20045429-20045448 | MS.gene70393:intron | 35.0% | |
| TTACCAGATGAGCGAATAAA+TGG | - | chr4.3:20047335-20047354 | MS.gene70393:CDS | 35.0% | |
| TTCCATGATGTCTAACTCTT+TGG | - | chr4.3:20050641-20050660 | MS.gene70393:CDS | 35.0% | |
| TTGAGTAGTTAGGGTTGAAT+AGG | - | chr4.3:20048093-20048112 | MS.gene70393:intron | 35.0% | |
| TTGTAATTACCACTTTCGTG+TGG | - | chr4.3:20047548-20047567 | MS.gene70393:CDS | 35.0% | |
| TTTCTTCTTTGTCTTGGAGT+TGG | + | chr4.3:20044594-20044613 | None:intergenic | 35.0% | |
| ! | AATTTTCTCGCAACCCAATT+TGG | + | chr4.3:20045024-20045043 | None:intergenic | 35.0% |
| ! | ACTCGTTTTCTTCTTTGTCT+TGG | + | chr4.3:20044600-20044619 | None:intergenic | 35.0% |
| ! | AGGTTAGCTGGTTAGTTAAA+AGG | - | chr4.3:20048126-20048145 | MS.gene70393:intron | 35.0% |
| ! | ATAAATGGAGGTGCATTTGT+TGG | - | chr4.3:20047350-20047369 | MS.gene70393:CDS | 35.0% |
| ! | ATCCTAAGAATGAACTTGCT+AGG | - | chr4.3:20046542-20046561 | MS.gene70393:CDS | 35.0% |
| ! | ATGATGGAACAAACTACTCT+AGG | - | chr4.3:20047808-20047827 | MS.gene70393:intron | 35.0% |
| ! | CCTGAAATTGAAGCTTGTTT+GGG | - | chr4.3:20049692-20049711 | MS.gene70393:CDS | 35.0% |
| ! | CTGTTTGAAATCATCATTGG+AGG | + | chr4.3:20045608-20045627 | None:intergenic | 35.0% |
| ! | GAATTTCGTTTTGTAGTTGG+AGG | - | chr4.3:20047723-20047742 | MS.gene70393:intron | 35.0% |
| ! | GCTGAATTTCGTTTTGTAGT+TGG | - | chr4.3:20047720-20047739 | MS.gene70393:intron | 35.0% |
| ! | GTATAAAAGCACACATATGC+GGG | + | chr4.3:20047060-20047079 | None:intergenic | 35.0% |
| ! | TTGTGTAATTGCTGTTGCAA+AGG | - | chr4.3:20047923-20047942 | MS.gene70393:CDS | 35.0% |
| ! | TTTCGACTAAGTTGGATACT+AGG | - | chr4.3:20045437-20045456 | MS.gene70393:intron | 35.0% |
| !! | AGTTATGTCGCTTTCTTTCA+CGG | + | chr4.3:20046163-20046182 | None:intergenic | 35.0% |
| !! | TTACAGGTATTAGCTTGTGA+GGG | + | chr4.3:20047394-20047413 | None:intergenic | 35.0% |
| AAAAAAGAGGGACCTGGATT+TGG | + | chr4.3:20044900-20044919 | None:intergenic | 40.0% | |
| AAAAAGAGGGACCTGGATTT+GGG | + | chr4.3:20044899-20044918 | None:intergenic | 40.0% | |
| ACAATTTCTTCCCGGGTAAT+TGG | + | chr4.3:20047762-20047781 | None:intergenic | 40.0% | |
| ACACTAAAGGAGTTGTGTGT+AGG | + | chr4.3:20046040-20046059 | None:intergenic | 40.0% | |
| ACAGACTGTCATACAAGTCT+AGG | + | chr4.3:20049155-20049174 | None:intergenic | 40.0% | |
| ACCAATCTGCAACTTTCACT+GGG | - | chr4.3:20050512-20050531 | MS.gene70393:CDS | 40.0% | |
| AGAATCAAACCCTAAACCAC+TGG | + | chr4.3:20048435-20048454 | None:intergenic | 40.0% | |
| AGCAAAGCAGCATGGAAAAA+TGG | + | chr4.3:20049016-20049035 | None:intergenic | 40.0% | |
| AGTGGGATCATTACAAGCAT+TGG | + | chr4.3:20049332-20049351 | None:intergenic | 40.0% | |
| ATATTGAAGCTGAGAATGCG+AGG | - | chr4.3:20045119-20045138 | MS.gene70393:intron | 40.0% | |
| ATCACAGTCCTTGACAATTC+AGG | + | chr4.3:20045415-20045434 | None:intergenic | 40.0% | |
| ATCCTTCTCTGTAGAATGCA+GGG | - | chr4.3:20047658-20047677 | MS.gene70393:intron | 40.0% | |
| ATCTTCACACAAGAGCTTGA+AGG | + | chr4.3:20048534-20048553 | None:intergenic | 40.0% | |
| ATTAGAACTCCTACCAAGGA+AGG | - | chr4.3:20046940-20046959 | MS.gene70393:intron | 40.0% | |
| CAAGGAAGGGCTATTTAATC+TGG | - | chr4.3:20046954-20046973 | MS.gene70393:intron | 40.0% | |
| CACCAAAGAGTTAGACATCA+TGG | + | chr4.3:20050646-20050665 | None:intergenic | 40.0% | |
| CAGATTAAATAGCCCTTCCT+TGG | + | chr4.3:20046956-20046975 | None:intergenic | 40.0% | |
| CATGATGTCTAACTCTTTGG+TGG | - | chr4.3:20050644-20050663 | MS.gene70393:CDS | 40.0% | |
| CCCAAACAAGCTTCAATTTC+AGG | + | chr4.3:20049695-20049714 | None:intergenic | 40.0% | |
| CCTTTATGAACCAGTGGTTT+AGG | - | chr4.3:20048422-20048441 | MS.gene70393:intron | 40.0% | |
| CGCCAGTTCTTAGATTCATT+TGG | - | chr4.3:20049292-20049311 | MS.gene70393:intron | 40.0% | |
| CTCATGGTCTCTACACAATA+AGG | - | chr4.3:20049076-20049095 | MS.gene70393:intron | 40.0% | |
| GAAGGAAACTAAGCAATTGG+GGG | + | chr4.3:20048831-20048850 | None:intergenic | 40.0% | |
| GACATATGGTGAGAAAGAGA+AGG | + | chr4.3:20044871-20044890 | None:intergenic | 40.0% | |
| GATAGAAGATGTTGCATCCT+TGG | - | chr4.3:20046340-20046359 | MS.gene70393:intron | 40.0% | |
| GATCATTCCACTTCTTGAGA+AGG | - | chr4.3:20046585-20046604 | MS.gene70393:intron | 40.0% | |
| GCTTCAATTTCAGGCAAGAA+AGG | + | chr4.3:20049686-20049705 | None:intergenic | 40.0% | |
| GGAAGGAAACTAAGCAATTG+GGG | + | chr4.3:20048832-20048851 | None:intergenic | 40.0% | |
| GGAGTTGAAGACATTCATGA+TGG | - | chr4.3:20047792-20047811 | MS.gene70393:intron | 40.0% | |
| GGATATTAGAACTCCTACCA+AGG | - | chr4.3:20046936-20046955 | MS.gene70393:intron | 40.0% | |
| GGTTAGGTAAATAGGTTAGC+TGG | - | chr4.3:20048114-20048133 | MS.gene70393:intron | 40.0% | |
| GTAAATGTGAGGGACCAAAT+TGG | - | chr4.3:20045007-20045026 | MS.gene70393:intron | 40.0% | |
| GTGGAAGGAAACTAAGCAAT+TGG | + | chr4.3:20048834-20048853 | None:intergenic | 40.0% | |
| TAGTCCTGGTGTGTCTATTA+TGG | + | chr4.3:20045224-20045243 | None:intergenic | 40.0% | |
| TATCCTTCTCTGTAGAATGC+AGG | - | chr4.3:20047657-20047676 | MS.gene70393:intron | 40.0% | |
| TATCTTCATAGGAAAGGGCA+GGG | - | chr4.3:20046684-20046703 | MS.gene70393:intron | 40.0% | |
| TCAATTTCAGGCAAGAAAGG+AGG | + | chr4.3:20049683-20049702 | None:intergenic | 40.0% | |
| TCAGAAGGACGTGAAAATTG+TGG | + | chr4.3:20045466-20045485 | None:intergenic | 40.0% | |
| TCAGGATATCTCCTTTCTCT+TGG | - | chr4.3:20047256-20047275 | MS.gene70393:intron | 40.0% | |
| TCGTAAAAATAGGGCCATAC+AGG | - | chr4.3:20045261-20045280 | MS.gene70393:intron | 40.0% | |
| TCTTCACACAAGAGCTTGAA+GGG | + | chr4.3:20048533-20048552 | None:intergenic | 40.0% | |
| TCTTCCTTTCTCCTTCAACT+TGG | + | chr4.3:20046816-20046835 | None:intergenic | 40.0% | |
| TGCACAATATCATCGAGCAA+TGG | - | chr4.3:20047698-20047717 | MS.gene70393:intron | 40.0% | |
| TGCACCTGGTCGTAAAAATA+GGG | - | chr4.3:20045252-20045271 | MS.gene70393:intron | 40.0% | |
| TGCAGTAGCAGTTGTATTCA+GGG | - | chr4.3:20046214-20046233 | MS.gene70393:CDS | 40.0% | |
| TGTGATAGAACAGTTGCAGT+GGG | + | chr4.3:20049349-20049368 | None:intergenic | 40.0% | |
| TTAAATAGCCCTTCCTTGGT+AGG | + | chr4.3:20046952-20046971 | None:intergenic | 40.0% | |
| TTAGAACTCCTACCAAGGAA+GGG | - | chr4.3:20046941-20046960 | MS.gene70393:intron | 40.0% | |
| TTAGCTGTACTTATGGATGC+AGG | - | chr4.3:20046301-20046320 | MS.gene70393:intron | 40.0% | |
| TTATCCACAAATGAGAGCCT+AGG | + | chr4.3:20047187-20047206 | None:intergenic | 40.0% | |
| TTATCTTCATAGGAAAGGGC+AGG | - | chr4.3:20046683-20046702 | MS.gene70393:intron | 40.0% | |
| TTGCAGTAGCAGTTGTATTC+AGG | - | chr4.3:20046213-20046232 | MS.gene70393:CDS | 40.0% | |
| TTGTGATAGAACAGTTGCAG+TGG | + | chr4.3:20049350-20049369 | None:intergenic | 40.0% | |
| ! | AAGACAACGTGTATTGGCAA+TGG | + | chr4.3:20045777-20045796 | None:intergenic | 40.0% |
| ! | ACACTTGATGGATGCATTCT+TGG | - | chr4.3:20045517-20045536 | MS.gene70393:intron | 40.0% |
| ! | AGCTGTCATTGCTGCTTAAA+GGG | - | chr4.3:20047125-20047144 | MS.gene70393:intron | 40.0% |
| ! | CTGAGCTTTACTTCTAGTTG+TGG | + | chr4.3:20049403-20049422 | None:intergenic | 40.0% |
| ! | CTTTATGTGTTTGGTGACTC+TGG | - | chr4.3:20049646-20049665 | MS.gene70393:intron | 40.0% |
| ! | GCCTGAAATTGAAGCTTGTT+TGG | - | chr4.3:20049691-20049710 | MS.gene70393:CDS | 40.0% |
| ! | TCAATTCTATCGGTTACTGC+TGG | - | chr4.3:20045856-20045875 | MS.gene70393:CDS | 40.0% |
| !! | AAGCTTTGTTTCAGCTGTCT+GGG | + | chr4.3:20049461-20049480 | None:intergenic | 40.0% |
| !! | ATAGTACACTTTGGAATCGG+AGG | - | chr4.3:20049494-20049513 | MS.gene70393:intron | 40.0% |
| !! | ATCTGCTTTTGAAGATGACC+TGG | - | chr4.3:20050472-20050491 | MS.gene70393:CDS | 40.0% |
| !! | CATAGCGTTGATTGGTGAAT+TGG | + | chr4.3:20046123-20046142 | None:intergenic | 40.0% |
| !! | CCTAAACCACTGGTTCATAA+AGG | + | chr4.3:20048425-20048444 | None:intergenic | 40.0% |
| !! | CTTACAGGTATTAGCTTGTG+AGG | + | chr4.3:20047395-20047414 | None:intergenic | 40.0% |
| !! | TCATATGAAGAGTAATGGGC+CGG | + | chr4.3:20044795-20044814 | None:intergenic | 40.0% |
| !! | TTCACGGCATGATTTTTCAG+TGG | + | chr4.3:20048791-20048810 | None:intergenic | 40.0% |
| !! | TTTCAGCACATAGCGTTGAT+TGG | + | chr4.3:20046131-20046150 | None:intergenic | 40.0% |
| !!! | ACTGCCAACTTTTTAGAGTC+GGG | - | chr4.3:20049261-20049280 | MS.gene70393:intron | 40.0% |
| !!! | CACTGCCAACTTTTTAGAGT+CGG | - | chr4.3:20049260-20049279 | MS.gene70393:intron | 40.0% |
| AAGAAGGAGACTCGCAATGT+GGG | + | chr4.3:20044825-20044844 | None:intergenic | 45.0% | |
| AATGCAGGGATGCGTCTTTA+TGG | - | chr4.3:20047672-20047691 | MS.gene70393:intron | 45.0% | |
| AATTTGCATTACAACGCGCC+TGG | + | chr4.3:20045389-20045408 | None:intergenic | 45.0% | |
| AGAAGATGTTGCATCCTTGG+AGG | - | chr4.3:20046343-20046362 | MS.gene70393:intron | 45.0% | |
| AGAAGTAAAGCTCAGTCACG+TGG | - | chr4.3:20049408-20049427 | MS.gene70393:intron | 45.0% | |
| AGACCATGAGACATATCGTG+TGG | + | chr4.3:20049066-20049085 | None:intergenic | 45.0% | |
| AGAGAGCCTTTATGAACCAG+TGG | - | chr4.3:20048416-20048435 | MS.gene70393:intron | 45.0% | |
| AGCAATTACACAAGCAGTCC+TGG | + | chr4.3:20047916-20047935 | None:intergenic | 45.0% | |
| AGTTGTGTGTAGGAGGTTTG+CGG | + | chr4.3:20046030-20046049 | None:intergenic | 45.0% | |
| ATCCCTGCATTCTACAGAGA+AGG | + | chr4.3:20047663-20047682 | None:intergenic | 45.0% | |
| ATGCAGGGATGCGTCTTTAT+GGG | - | chr4.3:20047673-20047692 | MS.gene70393:intron | 45.0% | |
| ATTACACAAGCAGTCCTGGT+TGG | + | chr4.3:20047912-20047931 | None:intergenic | 45.0% | |
| ATTTCTTCCCGGGTAATTGG+AGG | + | chr4.3:20047759-20047778 | None:intergenic | 45.0% | |
| CACACATGCAACATAGCTTC+AGG | - | chr4.3:20050089-20050108 | MS.gene70393:CDS | 45.0% | |
| CAGTAGCAGTTGTATTCAGG+GGG | - | chr4.3:20046216-20046235 | MS.gene70393:CDS | 45.0% | |
| CATAAGCAGAAAGAGCCTCT+TGG | + | chr4.3:20049785-20049804 | None:intergenic | 45.0% | |
| CCAATCTGCAACTTTCACTG+GGG | - | chr4.3:20050513-20050532 | MS.gene70393:CDS | 45.0% | |
| CCAGATGAGCGAATAAATGG+AGG | - | chr4.3:20047338-20047357 | MS.gene70393:CDS | 45.0% | |
| CCTAAACTCACAAGGATCCA+GGG | + | chr4.3:20046188-20046207 | None:intergenic | 45.0% | |
| CCTCCATTTATTCGCTCATC+TGG | + | chr4.3:20047341-20047360 | None:intergenic | 45.0% | |
| CTAAAGGAGTTGTGTGTAGG+AGG | + | chr4.3:20046037-20046056 | None:intergenic | 45.0% | |
| CTCACCATAATAGACACACC+AGG | - | chr4.3:20045217-20045236 | MS.gene70393:intron | 45.0% | |
| CTGAAGCTATGTTGCATGTG+TGG | + | chr4.3:20050091-20050110 | None:intergenic | 45.0% | |
| CTGCACCTGGTCGTAAAAAT+AGG | - | chr4.3:20045251-20045270 | MS.gene70393:intron | 45.0% | |
| CTTTGTCTTGGAGTTGGAGT+TGG | + | chr4.3:20044588-20044607 | None:intergenic | 45.0% | |
| GACAGCTGAAACAAAGCTTG+CGG | - | chr4.3:20049462-20049481 | MS.gene70393:intron | 45.0% | |
| GACCAATCTGCAACTTTCAC+TGG | - | chr4.3:20050511-20050530 | MS.gene70393:CDS | 45.0% | |
| GCAGGCAACTTATCCACAAT+GGG | + | chr4.3:20050431-20050450 | None:intergenic | 45.0% | |
| GCAGTAGCAGTTGTATTCAG+GGG | - | chr4.3:20046215-20046234 | MS.gene70393:CDS | 45.0% | |
| GCATCCTTGGAGGAGAAATT+GGG | - | chr4.3:20046353-20046372 | MS.gene70393:intron | 45.0% | |
| GCCTTAGTTGAGGCTCTTAT+GGG | - | chr4.3:20044730-20044749 | MS.gene70393:intron | 45.0% | |
| GGATAGGTGTGAGCAAACTT+AGG | - | chr4.3:20046405-20046424 | MS.gene70393:intron | 45.0% | |
| GGATTCTGCAAAGTTGTCGA+AGG | + | chr4.3:20048770-20048789 | None:intergenic | 45.0% | |
| GGATTTGGGAAAGGGACATA+TGG | + | chr4.3:20044885-20044904 | None:intergenic | 45.0% | |
| GGGGCGAATGTTATTAGTAG+AGG | - | chr4.3:20045999-20046018 | MS.gene70393:CDS | 45.0% | |
| GTTTCCTAGGCTCTCATTTG+TGG | - | chr4.3:20047180-20047199 | MS.gene70393:intron | 45.0% | |
| TATCCACAATGGGCATCAAG+AGG | + | chr4.3:20050421-20050440 | None:intergenic | 45.0% | |
| TATGTCCCTTTCCCAAATCC+AGG | - | chr4.3:20044885-20044904 | MS.gene70393:intron | 45.0% | |
| TCAGAGAGGAGATAGCAAGA+AGG | + | chr4.3:20044841-20044860 | None:intergenic | 45.0% | |
| TCCTAAACTCACAAGGATCC+AGG | + | chr4.3:20046189-20046208 | None:intergenic | 45.0% | |
| TCGTGCAAAAATGCAGCACA+AGG | - | chr4.3:20045312-20045331 | MS.gene70393:intron | 45.0% | |
| TGAGTATCTAAGTGGCCATC+AGG | - | chr4.3:20048720-20048739 | MS.gene70393:intron | 45.0% | |
| TGCAGGCAACTTATCCACAA+TGG | + | chr4.3:20050432-20050451 | None:intergenic | 45.0% | |
| TGCATCCTTGGAGGAGAAAT+TGG | - | chr4.3:20046352-20046371 | MS.gene70393:intron | 45.0% | |
| TGGGTTGCGAGAAAATTGTG+AGG | - | chr4.3:20045027-20045046 | MS.gene70393:intron | 45.0% | |
| TGTGCTTGAATCAGTTCCAG+AGG | + | chr4.3:20049434-20049453 | None:intergenic | 45.0% | |
| TTGGTAGAAACATCAGAGCC+TGG | - | chr4.3:20049963-20049982 | MS.gene70393:CDS | 45.0% | |
| TTTCCTCTTGATGCCCATTG+TGG | - | chr4.3:20050415-20050434 | MS.gene70393:CDS | 45.0% | |
| TTTCTTCCCGGGTAATTGGA+GGG | + | chr4.3:20047758-20047777 | None:intergenic | 45.0% | |
| ! | ACTGGATGAAGCCAAGTTGA+AGG | - | chr4.3:20046802-20046821 | MS.gene70393:intron | 45.0% |
| ! | ATAGCTTCAGGTTCAGCACA+AGG | - | chr4.3:20050101-20050120 | MS.gene70393:CDS | 45.0% |
| ! | ATTCTATCGGTTACTGCTGG+TGG | - | chr4.3:20045859-20045878 | MS.gene70393:CDS | 45.0% |
| ! | CACTTCTTGAGAAGGAGCAT+CGG | - | chr4.3:20046593-20046612 | MS.gene70393:intron | 45.0% |
| ! | CAGCTGTCATTGCTGCTTAA+AGG | - | chr4.3:20047124-20047143 | MS.gene70393:intron | 45.0% |
| ! | CGACTCTAAAAAGTTGGCAG+TGG | + | chr4.3:20049262-20049281 | None:intergenic | 45.0% |
| ! | GAAGCCAAGTTGAAGGAGAA+AGG | - | chr4.3:20046809-20046828 | MS.gene70393:intron | 45.0% |
| ! | GGCATGGGTTAAGACACTAA+AGG | + | chr4.3:20046053-20046072 | None:intergenic | 45.0% |
| !! | CAAGCTTTGTTTCAGCTGTC+TGG | + | chr4.3:20049462-20049481 | None:intergenic | 45.0% |
| !! | GAAGGCACCGAAGTAAAGAA+TGG | + | chr4.3:20045550-20045569 | None:intergenic | 45.0% |
| !! | TGGTGGTTTTGCAGATCAAG+AGG | - | chr4.3:20050661-20050680 | MS.gene70393:CDS | 45.0% |
| !! | TTCTTTACTTCGGTGCCTTC+TGG | - | chr4.3:20045550-20045569 | MS.gene70393:intron | 45.0% |
| !!! | ATGGCCCTATTTTTACGACC+AGG | + | chr4.3:20045259-20045278 | None:intergenic | 45.0% |
| !!! | CTATTTTTACGACCAGGTGC+AGG | + | chr4.3:20045253-20045272 | None:intergenic | 45.0% |
| !! | ATAATAATAATAATAATACA+AGG | + | chr4.3:20050182-20050201 | None:intergenic | 5.0% |
| !! | TATATAAAAAATAATAATGA+TGG | + | chr4.3:20046510-20046529 | None:intergenic | 5.0% |
| !!! | TATAAATAATTTTTTAAAAG+GGG | + | chr4.3:20047483-20047502 | None:intergenic | 5.0% |
| AAATAGGGCCATACAGGCAC+AGG | - | chr4.3:20045267-20045286 | MS.gene70393:intron | 50.0% | |
| AGGGACCTGGATTTGGGAAA+GGG | + | chr4.3:20044893-20044912 | None:intergenic | 50.0% | |
| AGTGTCTTAACCCATGCCAC+TGG | - | chr4.3:20046055-20046074 | MS.gene70393:intron | 50.0% | |
| ATAAGTTGCCTGCACGCCTT+CGG | - | chr4.3:20050438-20050457 | MS.gene70393:CDS | 50.0% | |
| ATTGGAGCAACGCAACTACC+AGG | - | chr4.3:20045368-20045387 | MS.gene70393:intron | 50.0% | |
| CAAGAAGGAGACTCGCAATG+TGG | + | chr4.3:20044826-20044845 | None:intergenic | 50.0% | |
| CATCCATCAAGTGTAGACGC+AGG | + | chr4.3:20045511-20045530 | None:intergenic | 50.0% | |
| CCAGAACCAACTCTTCCAGA+AGG | + | chr4.3:20045568-20045587 | None:intergenic | 50.0% | |
| CCCCAGTGAAAGTTGCAGAT+TGG | + | chr4.3:20050516-20050535 | None:intergenic | 50.0% | |
| CCCTGGATCCTTGTGAGTTT+AGG | - | chr4.3:20046185-20046204 | MS.gene70393:intron | 50.0% | |
| CCTTCCCAATTTCTCCTCCA+AGG | + | chr4.3:20046360-20046379 | None:intergenic | 50.0% | |
| CCTTGGAGGAGAAATTGGGA+AGG | - | chr4.3:20046357-20046376 | MS.gene70393:intron | 50.0% | |
| CGATGCTCCTTCTCAAGAAG+TGG | + | chr4.3:20046595-20046614 | None:intergenic | 50.0% | |
| CGCCTTAGTTGAGGCTCTTA+TGG | - | chr4.3:20044729-20044748 | MS.gene70393:intron | 50.0% | |
| GAAAGCGACATAACTAGCCC+TGG | - | chr4.3:20046168-20046187 | MS.gene70393:intron | 50.0% | |
| GAGAAGGGTCATCATCAGAG+AGG | + | chr4.3:20044855-20044874 | None:intergenic | 50.0% | |
| GCACCACACGATATGTCTCA+TGG | - | chr4.3:20049060-20049079 | MS.gene70393:intron | 50.0% | |
| GCCCATAAGAGCCTCAACTA+AGG | + | chr4.3:20044734-20044753 | None:intergenic | 50.0% | |
| GTGAGGGAACTGAACACCAT+CGG | + | chr4.3:20047378-20047397 | None:intergenic | 50.0% | |
| GTGTCTTAACCCATGCCACT+GGG | - | chr4.3:20046056-20046075 | MS.gene70393:intron | 50.0% | |
| TCAAGTGCCCTCCAATTACC+CGG | - | chr4.3:20047748-20047767 | MS.gene70393:intron | 50.0% | |
| TGAAGCTGAGAATGCGAGGT+TGG | - | chr4.3:20045123-20045142 | MS.gene70393:intron | 50.0% | |
| TGCAAAGTTGTCGAAGGCAG+AGG | + | chr4.3:20048764-20048783 | None:intergenic | 50.0% | |
| TGCAGGGATGCGTCTTTATG+GGG | - | chr4.3:20047674-20047693 | MS.gene70393:intron | 50.0% | |
| TGTCTTGGAGTTGGAGTTGG+TGG | + | chr4.3:20044585-20044604 | None:intergenic | 50.0% | |
| ! | CCTGCCCGACTCTAAAAAGT+TGG | + | chr4.3:20049268-20049287 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGAGTTGGTTC+TGG | - | chr4.3:20045565-20045584 | MS.gene70393:intron | 50.0% |
| ! | CTTTGTTTCAGCTGTCTGGG+TGG | + | chr4.3:20049458-20049477 | None:intergenic | 50.0% |
| !! | TATGAAGAGTAATGGGCCGG+CGG | + | chr4.3:20044792-20044811 | None:intergenic | 50.0% |
| !!! | CCAACTTTTTAGAGTCGGGC+AGG | - | chr4.3:20049265-20049284 | MS.gene70393:intron | 50.0% |
| AAGGAGTAGCCCAGTGGCAT+GGG | + | chr4.3:20046068-20046087 | None:intergenic | 55.0% | |
| AGCAGTTGTATTCAGGGGGC+TGG | - | chr4.3:20046220-20046239 | MS.gene70393:CDS | 55.0% | |
| ATACCGAAGGAGTAGCCCAG+TGG | + | chr4.3:20046074-20046093 | None:intergenic | 55.0% | |
| ATGCCACTGGGCTACTCCTT+CGG | - | chr4.3:20046068-20046087 | MS.gene70393:intron | 55.0% | |
| CAAGTGCCCTCCAATTACCC+GGG | - | chr4.3:20047749-20047768 | MS.gene70393:intron | 55.0% | |
| CAGATTCTAGGTCCTCCCGA+AGG | + | chr4.3:20050457-20050476 | None:intergenic | 55.0% | |
| CCACCTGCGTCTACACTTGA+TGG | - | chr4.3:20045505-20045524 | MS.gene70393:intron | 55.0% | |
| CCATCAAGTGTAGACGCAGG+TGG | + | chr4.3:20045508-20045527 | None:intergenic | 55.0% | |
| CTGCAGATGCATGGAGGACT+TGG | - | chr4.3:20049034-20049053 | MS.gene70393:intron | 55.0% | |
| GAGGGACCTGGATTTGGGAA+AGG | + | chr4.3:20044894-20044913 | None:intergenic | 55.0% | |
| GCAGGGATGCGTCTTTATGG+GGG | - | chr4.3:20047675-20047694 | MS.gene70393:intron | 55.0% | |
| GCATCTGCAGCAAAGCAGCA+TGG | + | chr4.3:20049024-20049043 | None:intergenic | 55.0% | |
| GCTTTGCTGCAGATGCATGG+AGG | - | chr4.3:20049028-20049047 | MS.gene70393:intron | 55.0% | |
| GGCTTCCAGTTCAACCACGT+CGG | - | chr4.3:20044751-20044770 | MS.gene70393:CDS | 55.0% | |
| GGCTTGCACCCTCTTCTGAA+AGG | - | chr4.3:20049515-20049534 | MS.gene70393:intron | 55.0% | |
| GTCGCGCCTCCTGATAAGTT+TGG | - | chr4.3:20047154-20047173 | MS.gene70393:intron | 55.0% | |
| GTTACTGCTGGTGGCATGCA+AGG | - | chr4.3:20045868-20045887 | MS.gene70393:CDS | 55.0% | |
| GTTGTGGGCCACCAAACAGA+CGG | - | chr4.3:20044700-20044719 | MS.gene70393:intron | 55.0% | |
| TAAGTTGCCTGCACGCCTTC+GGG | - | chr4.3:20050439-20050458 | MS.gene70393:CDS | 55.0% | |
| TTCCAGTTCAACCACGTCGG+TGG | - | chr4.3:20044754-20044773 | MS.gene70393:CDS | 55.0% | |
| TTGTGGGCCACCAAACAGAC+GGG | - | chr4.3:20044701-20044720 | MS.gene70393:intron | 55.0% | |
| ! | GCTGCTTTGCTGCAGATGCA+TGG | - | chr4.3:20049025-20049044 | MS.gene70393:intron | 55.0% |
| ! | TCGGTGCCTTCTGGAAGAGT+TGG | - | chr4.3:20045559-20045578 | MS.gene70393:intron | 55.0% |
| !! | ATGAAGAGTAATGGGCCGGC+GGG | + | chr4.3:20044791-20044810 | None:intergenic | 55.0% |
| !! | GGTGCATTTGTTGGTGCCGA+TGG | - | chr4.3:20047359-20047378 | MS.gene70393:CDS | 55.0% |
| AAGCTCAGTCACGTGGCCTC+TGG | - | chr4.3:20049415-20049434 | MS.gene70393:intron | 60.0% | |
| AGGCGCTCTTCCCGTCTGTT+TGG | + | chr4.3:20044714-20044733 | None:intergenic | 60.0% | |
| CACCACCGACGTGGTTGAAC+TGG | + | chr4.3:20044759-20044778 | None:intergenic | 60.0% | |
| CACGCCTGAGGAACACCTGA+TGG | + | chr4.3:20048738-20048757 | None:intergenic | 60.0% | |
| CAGTTCAACCACGTCGGTGG+TGG | - | chr4.3:20044757-20044776 | MS.gene70393:CDS | 60.0% | |
| CGCTCTTCCCGTCTGTTTGG+TGG | + | chr4.3:20044711-20044730 | None:intergenic | 60.0% | |
| GAAGGAGTAGCCCAGTGGCA+TGG | + | chr4.3:20046069-20046088 | None:intergenic | 60.0% | |
| GGTGCAGGAGCAACTAGTCC+TGG | + | chr4.3:20045238-20045257 | None:intergenic | 60.0% | |
| GTGGCCATCAGGTGTTCCTC+AGG | - | chr4.3:20048731-20048750 | MS.gene70393:intron | 60.0% | |
| GTGTAGACGCAGGTGGCGAA+AGG | + | chr4.3:20045501-20045520 | None:intergenic | 60.0% | |
| ! | TTGGTGGCCCACAACCAGCA+CGG | + | chr4.3:20044695-20044714 | None:intergenic | 60.0% |
| !! | AGGAGCATCGGAGCGTGACA+AGG | - | chr4.3:20046605-20046624 | MS.gene70393:intron | 60.0% |
| !! | CGGGAAGAGCGCCTTAGTTG+AGG | - | chr4.3:20044720-20044739 | MS.gene70393:intron | 60.0% |
| !! | GGACTAGTTGCTCCTGCACC+TGG | - | chr4.3:20045238-20045257 | MS.gene70393:intron | 60.0% |
| !!! | AGTAATGGGCCGGCGGGTTT+TGG | + | chr4.3:20044785-20044804 | None:intergenic | 60.0% |
| !!! | TTTTGGTGCCACCACCGACG+TGG | + | chr4.3:20044768-20044787 | None:intergenic | 60.0% |
| AGGCAGAGGCAACACGCCTG+AGG | + | chr4.3:20048750-20048769 | None:intergenic | 65.0% | |
| CATACAGGCACAGGCACGGG+CGG | - | chr4.3:20045276-20045295 | MS.gene70393:intron | 65.0% | |
| GGCCATACAGGCACAGGCAC+GGG | - | chr4.3:20045273-20045292 | MS.gene70393:intron | 65.0% | |
| GGGCCATACAGGCACAGGCA+CGG | - | chr4.3:20045272-20045291 | MS.gene70393:intron | 65.0% | |
| GTGGTGGCACCAAAACCCGC+CGG | - | chr4.3:20044773-20044792 | MS.gene70393:CDS | 65.0% | |
| TCACACGCCTTTCGACGCGC+CGG | - | chr4.3:20044669-20044688 | MS.gene70393:intron | 65.0% | |
| CGCCCGTGCCTGTGCCTGTA+TGG | + | chr4.3:20045278-20045297 | None:intergenic | 70.0% | |
| GTTGCCTGCACGCCTTCGGG+AGG | - | chr4.3:20050442-20050461 | MS.gene70393:CDS | 70.0% | |
| TGGCCCACAACCAGCACGGC+CGG | + | chr4.3:20044691-20044710 | None:intergenic | 70.0% | |
| ! | AGGTCCTCCCGAAGGCGTGC+AGG | + | chr4.3:20050449-20050468 | None:intergenic | 70.0% |
| AGCACGGCCGGCGCGTCGAA+AGG | + | chr4.3:20044679-20044698 | None:intergenic | 75.0% | |
| ! | TTTCGACGCGCCGGCCGTGC+TGG | - | chr4.3:20044678-20044697 | MS.gene70393:intron | 75.0% |
| !! | GCGCCGGCCGTGCTGGTTGT+GGG | - | chr4.3:20044685-20044704 | MS.gene70393:intron | 75.0% |
| !!! | CGCGCCGGCCGTGCTGGTTG+TGG | - | chr4.3:20044684-20044703 | MS.gene70393:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20044562 | 20050740 | 20044562 | ID=MS.gene70393 |
| chr4.3 | mRNA | 20044562 | 20050740 | 20044562 | ID=MS.gene70393.t1;Parent=MS.gene70393 |
| chr4.3 | exon | 20050396 | 20050740 | 20050396 | ID=MS.gene70393.t1.exon1;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20050396 | 20050740 | 20050396 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20049675 | 20050187 | 20049675 | ID=MS.gene70393.t1.exon2;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20049675 | 20050187 | 20049675 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20048846 | 20048979 | 20048846 | ID=MS.gene70393.t1.exon3;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20048846 | 20048979 | 20048846 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20048646 | 20048738 | 20048646 | ID=MS.gene70393.t1.exon4;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20048646 | 20048738 | 20048646 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20048440 | 20048503 | 20048440 | ID=MS.gene70393.t1.exon5;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20048440 | 20048503 | 20048440 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20048127 | 20048175 | 20048127 | ID=MS.gene70393.t1.exon6;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20048127 | 20048175 | 20048127 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20047893 | 20047975 | 20047893 | ID=MS.gene70393.t1.exon7;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20047893 | 20047975 | 20047893 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20047473 | 20047630 | 20047473 | ID=MS.gene70393.t1.exon8;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20047473 | 20047630 | 20047473 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20047325 | 20047385 | 20047325 | ID=MS.gene70393.t1.exon9;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20047325 | 20047385 | 20047325 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20046993 | 20047055 | 20046993 | ID=MS.gene70393.t1.exon10;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20046993 | 20047055 | 20046993 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20046490 | 20046590 | 20046490 | ID=MS.gene70393.t1.exon11;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20046490 | 20046590 | 20046490 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20046205 | 20046262 | 20046205 | ID=MS.gene70393.t1.exon12;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20046205 | 20046262 | 20046205 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20045693 | 20046025 | 20045693 | ID=MS.gene70393.t1.exon13;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20045693 | 20046025 | 20045693 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20044731 | 20044895 | 20044731 | ID=MS.gene70393.t1.exon14;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20044731 | 20044895 | 20044731 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| chr4.3 | exon | 20044562 | 20044627 | 20044562 | ID=MS.gene70393.t1.exon15;Parent=MS.gene70393.t1 |
| chr4.3 | CDS | 20044562 | 20044627 | 20044562 | ID=cds.MS.gene70393.t1;Parent=MS.gene70393.t1 |
| Gene Sequence |
| Protein sequence |
