Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35043.t1 | XP_013457218.1 | 99.1 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.00E+00 | 1490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35043.t1 | Q84N64 | 78.9 | 739 | 156 | 0 | 17 | 755 | 23 | 761 | 0.0e+00 | 1166.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35043.t1 | A0A072UN67 | 99.1 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.0e+00 | 1490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050354 | MS.gene35043 | -0.838836 | 2.27E-57 | -1.69E-46 |
| MS.gene051333 | MS.gene35043 | 0.854063 | 1.58E-61 | -1.69E-46 |
| MS.gene051564 | MS.gene35043 | 0.818728 | 1.68E-52 | -1.69E-46 |
| MS.gene051566 | MS.gene35043 | 0.811437 | 7.00E-51 | -1.69E-46 |
| MS.gene058041 | MS.gene35043 | 0.806233 | 9.08E-50 | -1.69E-46 |
| MS.gene059529 | MS.gene35043 | 0.830861 | 2.31E-55 | -1.69E-46 |
| MS.gene059530 | MS.gene35043 | 0.857577 | 1.48E-62 | -1.69E-46 |
| MS.gene060356 | MS.gene35043 | 0.804529 | 2.07E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35043.t1 | MTR_4g094300 | 99.080 | 761 | 5 | 1 | 1 | 761 | 1 | 759 | 0.0 | 1561 |
| MS.gene35043.t1 | MTR_8g463270 | 32.294 | 449 | 280 | 9 | 23 | 465 | 27 | 457 | 1.84e-58 | 213 |
| MS.gene35043.t1 | MTR_4g093750 | 30.570 | 193 | 126 | 5 | 37 | 228 | 32 | 217 | 1.25e-13 | 75.1 |
| MS.gene35043.t1 | MTR_4g093750 | 31.053 | 190 | 123 | 5 | 40 | 228 | 35 | 217 | 1.75e-13 | 74.7 |
| MS.gene35043.t1 | MTR_8g099550 | 27.723 | 202 | 135 | 5 | 30 | 228 | 21 | 214 | 1.23e-11 | 68.6 |
| MS.gene35043.t1 | MTR_2g009690 | 27.861 | 201 | 121 | 5 | 37 | 228 | 41 | 226 | 2.52e-11 | 67.8 |
| MS.gene35043.t1 | MTR_8g027675 | 26.887 | 212 | 123 | 7 | 30 | 228 | 21 | 213 | 3.30e-11 | 67.0 |
| MS.gene35043.t1 | MTR_1g032550 | 27.807 | 187 | 127 | 4 | 43 | 228 | 36 | 215 | 3.40e-11 | 67.0 |
| MS.gene35043.t1 | MTR_8g105580 | 28.342 | 187 | 125 | 4 | 43 | 228 | 36 | 214 | 3.88e-11 | 67.0 |
| MS.gene35043.t1 | MTR_8g105580 | 28.342 | 187 | 125 | 4 | 43 | 228 | 36 | 214 | 4.29e-11 | 66.6 |
| MS.gene35043.t1 | MTR_8g009510 | 28.342 | 187 | 126 | 4 | 43 | 228 | 41 | 220 | 4.89e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35043.t1 | AT3G19720 | 78.890 | 739 | 156 | 0 | 17 | 755 | 23 | 761 | 0.0 | 1206 |
| MS.gene35043.t1 | AT3G19720 | 77.267 | 739 | 132 | 1 | 17 | 755 | 23 | 725 | 0.0 | 1170 |
| MS.gene35043.t1 | AT3G19720 | 73.548 | 775 | 133 | 3 | 17 | 755 | 23 | 761 | 0.0 | 1145 |
| MS.gene35043.t1 | AT1G53140 | 29.735 | 565 | 363 | 14 | 23 | 572 | 43 | 588 | 1.14e-60 | 219 |
| MS.gene35043.t1 | AT4G33650 | 29.016 | 193 | 122 | 5 | 43 | 228 | 60 | 244 | 2.35e-12 | 71.2 |
| MS.gene35043.t1 | AT4G33650 | 29.016 | 193 | 122 | 5 | 43 | 228 | 60 | 244 | 2.41e-12 | 71.2 |
| MS.gene35043.t1 | AT1G14830 | 28.877 | 187 | 125 | 4 | 43 | 228 | 36 | 215 | 1.25e-11 | 68.6 |
| MS.gene35043.t1 | AT2G44590 | 28.877 | 187 | 125 | 4 | 43 | 228 | 36 | 215 | 1.83e-11 | 68.2 |
| MS.gene35043.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 1.95e-11 | 67.4 |
| MS.gene35043.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 2.93e-11 | 67.4 |
| MS.gene35043.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 3.48e-11 | 67.0 |
| MS.gene35043.t1 | AT5G42080 | 27.228 | 202 | 136 | 5 | 30 | 228 | 21 | 214 | 3.48e-11 | 67.0 |
Find 190 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTGAAAGGATTGTTTA+TGG | 0.162341 | 4.4:-20598662 | MS.gene35043:CDS |
| CAGCTGTCATTGCTGCTTAA+AGG | 0.162593 | 4.4:-20601065 | MS.gene35043:CDS |
| CTTGGTTTCTACAGAATTAA+AGG | 0.177555 | 4.4:-20598600 | MS.gene35043:intron |
| CAAGCTTTGTTTCAGCTGTC+TGG | 0.191720 | 4.4:+20598729 | None:intergenic |
| CGCCTTAGTTGAGGCTCTTA+TGG | 0.197470 | 4.4:-20603462 | MS.gene35043:CDS |
| TGCATCCTTGGAGGAGAAAT+TGG | 0.198064 | 4.4:-20601837 | MS.gene35043:CDS |
| AATGCAGGGATGCGTCTTTA+TGG | 0.205537 | 4.4:-20600516 | MS.gene35043:CDS |
| ACAATTTCTTCCCGGGTAAT+TGG | 0.225123 | 4.4:+20600429 | None:intergenic |
| TTCTTTACTTCGGTGCCTTC+TGG | 0.270195 | 4.4:-20602639 | MS.gene35043:CDS |
| AGTAATGGGCCGGCGGGTTT+TGG | 0.273814 | 4.4:+20603409 | None:intergenic |
| ACACTTGATGGATGCATTCT+TGG | 0.281907 | 4.4:-20602672 | MS.gene35043:CDS |
| GCCTTAGTTGAGGCTCTTAT+GGG | 0.288458 | 4.4:-20603461 | MS.gene35043:CDS |
| ATAAAAGAGGGACCTGGATT+TGG | 0.311312 | 4.4:+20603294 | None:intergenic |
| ATTACTCTTCATATGAAATA+TGG | 0.321859 | 4.4:-20603392 | MS.gene35043:CDS |
| TTACCAGATGAGCGAATAAA+TGG | 0.323825 | 4.4:-20600854 | MS.gene35043:CDS |
| CGCGCCGGCCGTGCTGGTTG+TGG | 0.324903 | 4.4:-20603507 | MS.gene35043:CDS |
| TAAGTTGCCTGCACGCCTTC+GGG | 0.332712 | 4.4:-20597746 | MS.gene35043:CDS |
| TAGTCCTGGTGTGTCTATTA+TGG | 0.333208 | 4.4:+20602968 | None:intergenic |
| CTCATGGTCTCTACACAATA+AGG | 0.336061 | 4.4:-20599112 | MS.gene35043:intron |
| CATCTTCAAAAGCAGATTCT+AGG | 0.339798 | 4.4:+20597719 | None:intergenic |
| GGAAACTTACCAAACTTATC+AGG | 0.347296 | 4.4:+20601026 | None:intergenic |
| AGCTGTCATTGCTGCTTAAA+GGG | 0.352524 | 4.4:-20601064 | MS.gene35043:CDS |
| CGCCAGTTCTTAGATTCATT+TGG | 0.359410 | 4.4:-20598896 | MS.gene35043:CDS |
| CCACCTGCGTCTACACTTGA+TGG | 0.365304 | 4.4:-20602684 | MS.gene35043:CDS |
| CCTTCTGGAAGAGTTGGTTC+TGG | 0.366317 | 4.4:-20602624 | MS.gene35043:CDS |
| ATCACAGTCCTTGACAATTC+AGG | 0.369623 | 4.4:+20602777 | None:intergenic |
| CGCCCGTGCCTGTGCCTGTA+TGG | 0.370611 | 4.4:+20602914 | None:intergenic |
| TAAAAGAGGGACCTGGATTT+GGG | 0.371553 | 4.4:+20603295 | None:intergenic |
| TGAAAGGATTGTTTATGGTT+TGG | 0.374121 | 4.4:-20598657 | MS.gene35043:CDS |
| GACCAATCTGCAACTTTCAC+TGG | 0.376245 | 4.4:-20597674 | MS.gene35043:CDS |
| TTTCGACGCGCCGGCCGTGC+TGG | 0.376913 | 4.4:-20603513 | MS.gene35043:CDS |
| GATAGAAGATGTTGCATCCT+TGG | 0.381459 | 4.4:-20601849 | MS.gene35043:CDS |
| TTGGTACAACAAATATTTCA+TGG | 0.384673 | 4.4:-20598638 | MS.gene35043:CDS |
| AACCTGTTTGAAATCATCAT+TGG | 0.384824 | 4.4:+20602581 | None:intergenic |
| CTTTGTCTTGGAGTTGGAGT+TGG | 0.387030 | 4.4:+20603606 | None:intergenic |
| ATAAGTTGCCTGCACGCCTT+CGG | 0.392038 | 4.4:-20597747 | MS.gene35043:CDS |
| TGGCATACGAGAATATTTCT+TGG | 0.392689 | 4.4:-20598618 | MS.gene35043:CDS |
| CCTCCATTTATTCGCTCATC+TGG | 0.395092 | 4.4:+20600851 | None:intergenic |
| ATGCAGGGATGCGTCTTTAT+GGG | 0.398998 | 4.4:-20600515 | MS.gene35043:CDS |
| ATACAGAAATTGAACTGAAA+AGG | 0.399496 | 4.4:-20597636 | MS.gene35043:CDS |
| AGGCGCTCTTCCCGTCTGTT+TGG | 0.402265 | 4.4:+20603480 | None:intergenic |
| TTTCTTCTTTGTCTTGGAGT+TGG | 0.402277 | 4.4:+20603600 | None:intergenic |
| TTTCGACTAAGTTGGATACT+AGG | 0.408928 | 4.4:-20602752 | MS.gene35043:CDS |
| AAGCTTTGTTTCAGCTGTCT+GGG | 0.412861 | 4.4:+20598730 | None:intergenic |
| CTTCTTTCTTGCTTTGACAA+TGG | 0.414823 | 4.4:+20601809 | None:intergenic |
| AAGCATTTACAATTTCTTCC+CGG | 0.417927 | 4.4:+20600421 | None:intergenic |
| CGCTCTTCCCGTCTGTTTGG+TGG | 0.420293 | 4.4:+20603483 | None:intergenic |
| TCCAAAGTGTACTATCTAGA+AGG | 0.422812 | 4.4:+20598702 | None:intergenic |
| GCGCCGGCCGTGCTGGTTGT+GGG | 0.424580 | 4.4:-20603506 | MS.gene35043:CDS |
| AAGCTCAGTCACGTGGCCTC+TGG | 0.425374 | 4.4:-20598773 | MS.gene35043:CDS |
| CTCCAATGATGATTTCAAAC+AGG | 0.429013 | 4.4:-20602583 | MS.gene35043:intron |
| CACCACCGACGTGGTTGAAC+TGG | 0.431077 | 4.4:+20603435 | None:intergenic |
| CTGCAGATGCATGGAGGACT+TGG | 0.434256 | 4.4:-20599154 | MS.gene35043:intron |
| TTGAAGAAATACTACAAAAG+AGG | 0.443086 | 4.4:-20601754 | MS.gene35043:intron |
| GTCTTGAAGATTGTAGTGAT+TGG | 0.444388 | 4.4:-20602839 | MS.gene35043:CDS |
| GTCGCGCCTCCTGATAAGTT+TGG | 0.444868 | 4.4:-20601035 | MS.gene35043:intron |
| TGTGATTGTTTCGACTAAGT+TGG | 0.455967 | 4.4:-20602760 | MS.gene35043:CDS |
| TGAGTATCTAAGTGGCCATC+AGG | 0.457017 | 4.4:-20599468 | MS.gene35043:CDS |
| GCATCCTTGGAGGAGAAATT+GGG | 0.457953 | 4.4:-20601836 | MS.gene35043:CDS |
| TATTTCATATGAAGAGTAAT+GGG | 0.459153 | 4.4:+20603395 | None:intergenic |
| TGTCTTGGAGTTGGAGTTGG+TGG | 0.469942 | 4.4:+20603609 | None:intergenic |
| GCTGCTTTGCTGCAGATGCA+TGG | 0.473544 | 4.4:-20599163 | MS.gene35043:intron |
| TATCCTTCTCTGTAGAATGC+AGG | 0.473558 | 4.4:-20600531 | MS.gene35043:intron |
| GTGATATAAATCAAGAATTG+AGG | 0.473579 | 4.4:-20601554 | MS.gene35043:intron |
| TAGATAGTACACTTTGGAAT+CGG | 0.477027 | 4.4:-20598697 | MS.gene35043:CDS |
| TTAATCACCTGATGAAGAAA+AGG | 0.478366 | 4.4:+20600225 | None:intergenic |
| CACCAAATGAATCTAAGAAC+TGG | 0.480476 | 4.4:+20598894 | None:intergenic |
| TACAGAAATTGAACTGAAAA+GGG | 0.482398 | 4.4:-20597635 | MS.gene35043:intron |
| ACCAATCTGCAACTTTCACT+GGG | 0.486344 | 4.4:-20597673 | MS.gene35043:CDS |
| TCTTCCTTTCTCCTTCAACT+TGG | 0.486429 | 4.4:+20601376 | None:intergenic |
| AGGGACCTGGATTTGGGAAA+GGG | 0.489850 | 4.4:+20603301 | None:intergenic |
| AGGTCCTCCCGAAGGCGTGC+AGG | 0.495111 | 4.4:+20597739 | None:intergenic |
| GGCCATACAGGCACAGGCAC+GGG | 0.495586 | 4.4:-20602916 | MS.gene35043:CDS |
| CGATGCTCCTTCTCAAGAAG+TGG | 0.500444 | 4.4:+20601597 | None:intergenic |
| TGATTCTCCATTCTTTACTT+CGG | 0.501902 | 4.4:-20602649 | MS.gene35043:CDS |
| ATAAACAATCCTTTCAGAAG+AGG | 0.502061 | 4.4:+20598664 | None:intergenic |
| GGATTTGGGAAAGGGACATA+TGG | 0.507538 | 4.4:+20603309 | None:intergenic |
| GGTGCATTTGTTGGTGCCGA+TGG | 0.507607 | 4.4:-20600830 | MS.gene35043:CDS |
| TCGGTGCCTTCTGGAAGAGT+TGG | 0.507960 | 4.4:-20602630 | MS.gene35043:CDS |
| CCCCAGTGAAAGTTGCAGAT+TGG | 0.507995 | 4.4:+20597672 | None:intergenic |
| GTGGCCATCAGGTGTTCCTC+AGG | 0.508175 | 4.4:-20599457 | MS.gene35043:CDS |
| CTGAGCTTTACTTCTAGTTG+TGG | 0.513837 | 4.4:+20598788 | None:intergenic |
| TCAAATTATATTCAGCACAC+TGG | 0.515656 | 4.4:-20601405 | MS.gene35043:intron |
| AAGCAAGAAAGAAGTAGGAT+AGG | 0.516003 | 4.4:-20601800 | MS.gene35043:CDS |
| ATAAATGGAGGTGCATTTGT+TGG | 0.517617 | 4.4:-20600839 | MS.gene35043:CDS |
| AGTGGGATCATTACAAGCAT+TGG | 0.518266 | 4.4:+20598859 | None:intergenic |
| ACTGGATGAAGCCAAGTTGA+AGG | 0.521534 | 4.4:-20601387 | MS.gene35043:CDS |
| GCAGGCAACTTATCCACAAT+GGG | 0.524857 | 4.4:+20597757 | None:intergenic |
| TGGCCCACAACCAGCACGGC+CGG | 0.525548 | 4.4:+20603503 | None:intergenic |
| CAGTTCAACCACGTCGGTGG+TGG | 0.526497 | 4.4:-20603434 | MS.gene35043:CDS |
| TTTCCTCTTGATGCCCATTG+TGG | 0.528183 | 4.4:-20597770 | MS.gene35043:CDS |
| AGCACGGCCGGCGCGTCGAA+AGG | 0.528895 | 4.4:+20603515 | None:intergenic |
| ACCTTCTAGATAGTACACTT+TGG | 0.529433 | 4.4:-20598703 | MS.gene35043:CDS |
| GATCATTCCACTTCTTGAGA+AGG | 0.529630 | 4.4:-20601604 | MS.gene35043:CDS |
| TGTCAAAGCAAGAAAGAAGT+AGG | 0.531849 | 4.4:-20601805 | MS.gene35043:CDS |
| TGCAAAGTTGTCGAAGGCAG+AGG | 0.532153 | 4.4:+20599427 | None:intergenic |
| GAAGCCAAGTTGAAGGAGAA+AGG | 0.532201 | 4.4:-20601380 | MS.gene35043:CDS |
| TAAGGAAATAATAATAAAAG+TGG | 0.533072 | 4.4:-20603015 | MS.gene35043:CDS |
| ATTTCTTCCCGGGTAATTGG+AGG | 0.533870 | 4.4:+20600432 | None:intergenic |
| ATCCTTCTCTGTAGAATGCA+GGG | 0.535796 | 4.4:-20600530 | MS.gene35043:intron |
| CAGTTCTTAGATTCATTTGG+TGG | 0.536557 | 4.4:-20598893 | MS.gene35043:CDS |
| GCCCATAAGAGCCTCAACTA+AGG | 0.536655 | 4.4:+20603460 | None:intergenic |
| AGCATTTACAATTTCTTCCC+GGG | 0.538399 | 4.4:+20600422 | None:intergenic |
| ATGATGGAACAAACTACTCT+AGG | 0.538851 | 4.4:-20600380 | MS.gene35043:intron |
| CCTTCCCAATTTCTCCTCCA+AGG | 0.539759 | 4.4:+20601832 | None:intergenic |
| TATGTCCCTTTCCCAAATCC+AGG | 0.542276 | 4.4:-20603306 | MS.gene35043:intron |
| TTGTGTAATTGCTGTTGCAA+AGG | 0.542310 | 4.4:-20600265 | MS.gene35043:CDS |
| GTGTCTATTATGGTGAGATT+AGG | 0.543431 | 4.4:+20602978 | None:intergenic |
| TGAAGCTGAGAATGCGAGGT+TGG | 0.543558 | 4.4:-20603066 | MS.gene35043:CDS |
| CTGTTTGAAATCATCATTGG+AGG | 0.543999 | 4.4:+20602584 | None:intergenic |
| GAAGAAATTGTAAATGCTTG+TGG | 0.544926 | 4.4:-20600417 | MS.gene35043:CDS |
| ATGAAGAGTAATGGGCCGGC+GGG | 0.546779 | 4.4:+20603403 | None:intergenic |
| GGCTTGCACCCTCTTCTGAA+AGG | 0.547455 | 4.4:-20598673 | MS.gene35043:CDS |
| TCAAGTGCCCTCCAATTACC+CGG | 0.547552 | 4.4:-20600440 | MS.gene35043:CDS |
| GAAGGCACCGAAGTAAAGAA+TGG | 0.547953 | 4.4:+20602642 | None:intergenic |
| GGACTAGTTGCTCCTGCACC+AGG | 0.550843 | 4.4:-20602951 | MS.gene35043:CDS |
| CACGCCTGAGGAACACCTGA+TGG | 0.551113 | 4.4:+20599453 | None:intergenic |
| CTTACAGGTATTAGCTTGTG+AGG | 0.551276 | 4.4:+20600797 | None:intergenic |
| GGTGCAGGAGCAACTAGTCC+TGG | 0.551746 | 4.4:+20602954 | None:intergenic |
| TCATGATATGTTCTTGACCA+AGG | 0.556614 | 4.4:-20601348 | MS.gene35043:intron |
| AATTTGCATTACAACGCGCC+TGG | 0.559478 | 4.4:+20602803 | None:intergenic |
| GGATAGGTGTGAGCAAACTT+AGG | 0.560619 | 4.4:-20601784 | MS.gene35043:CDS |
| ATATTTCATATGAAGAGTAA+TGG | 0.564525 | 4.4:+20603394 | None:intergenic |
| GGGCCATACAGGCACAGGCA+CGG | 0.565838 | 4.4:-20602917 | MS.gene35043:CDS |
| TGCAGGGATGCGTCTTTATG+GGG | 0.567216 | 4.4:-20600514 | MS.gene35043:CDS |
| CTTTGTTTCAGCTGTCTGGG+TGG | 0.567373 | 4.4:+20598733 | None:intergenic |
| CACTTCTTGAGAAGGAGCAT+CGG | 0.568800 | 4.4:-20601596 | MS.gene35043:CDS |
| TTTCTTCCCGGGTAATTGGA+GGG | 0.576915 | 4.4:+20600433 | None:intergenic |
| CGGGAAGAGCGCCTTAGTTG+AGG | 0.577376 | 4.4:-20603471 | MS.gene35043:CDS |
| ATTGGAGCAACGCAACTACC+AGG | 0.580115 | 4.4:-20602821 | MS.gene35043:CDS |
| AAAGATTGTGAGTATCTAAG+TGG | 0.583085 | 4.4:-20599476 | MS.gene35043:CDS |
| GTTGTGGGCCACCAAACAGA+CGG | 0.583962 | 4.4:-20603491 | MS.gene35043:CDS |
| GTGTAGACGCAGGTGGCGAA+AGG | 0.584125 | 4.4:+20602691 | None:intergenic |
| ACAAACAAATGTGCAAGAGA+AGG | 0.587825 | 4.4:-20598822 | MS.gene35043:CDS |
| AAATAGGGCCATACAGGCAC+AGG | 0.587978 | 4.4:-20602922 | MS.gene35043:CDS |
| TAAACAATCCTTTCAGAAGA+GGG | 0.590872 | 4.4:+20598665 | None:intergenic |
| TGCAGGCAACTTATCCACAA+TGG | 0.590908 | 4.4:+20597756 | None:intergenic |
| GTTGCCTGCACGCCTTCGGG+AGG | 0.591678 | 4.4:-20597743 | MS.gene35043:CDS |
| AGGAGCATCGGAGCGTGACA+AGG | 0.595430 | 4.4:-20601584 | MS.gene35043:CDS |
| ATAGTACACTTTGGAATCGG+AGG | 0.596031 | 4.4:-20598694 | MS.gene35043:CDS |
| CATACAGGCACAGGCACGGG+CGG | 0.596791 | 4.4:-20602913 | MS.gene35043:CDS |
| TTACAGGTATTAGCTTGTGA+GGG | 0.597671 | 4.4:+20600798 | None:intergenic |
| TCAGAAGGACGTGAAAATTG+TGG | 0.598389 | 4.4:+20602726 | None:intergenic |
| AGGAAAACTTCAACATCAGA+AGG | 0.598510 | 4.4:+20602711 | None:intergenic |
| TCATATGAAGAGTAATGGGC+CGG | 0.598845 | 4.4:+20603399 | None:intergenic |
| TTCCAGTTCAACCACGTCGG+TGG | 0.601584 | 4.4:-20603437 | MS.gene35043:CDS |
| TTGTGGGCCACCAAACAGAC+GGG | 0.604019 | 4.4:-20603490 | MS.gene35043:CDS |
| GAGGGACCTGGATTTGGGAA+AGG | 0.604316 | 4.4:+20603300 | None:intergenic |
| AAGAAGGAGACTCGCAATGT+GGG | 0.605505 | 4.4:+20603369 | None:intergenic |
| GGAGTTGAAGACATTCATGA+TGG | 0.606200 | 4.4:-20600396 | MS.gene35043:CDS |
| AGAAGATGTTGCATCCTTGG+AGG | 0.608682 | 4.4:-20601846 | MS.gene35043:CDS |
| GACATATGGTGAGAAAGAGA+AGG | 0.609488 | 4.4:+20603323 | None:intergenic |
| AGGCAGAGGCAACACGCCTG+AGG | 0.612673 | 4.4:+20599441 | None:intergenic |
| TCACACGCCTTTCGACGCGC+CGG | 0.619278 | 4.4:-20603522 | MS.gene35043:CDS |
| CAGTGGTTCATATATTCAAG+CGG | 0.622329 | 4.4:+20597452 | None:intergenic |
| ACATATGGTGAGAAAGAGAA+GGG | 0.625084 | 4.4:+20603324 | None:intergenic |
| GTGAGGGAACTGAACACCAT+CGG | 0.625618 | 4.4:+20600814 | None:intergenic |
| TCAAGAAGTGGAATGATCAA+CGG | 0.629262 | 4.4:+20601609 | None:intergenic |
| GGATTCTGCAAAGTTGTCGA+AGG | 0.629616 | 4.4:+20599421 | None:intergenic |
| TATCCACAATGGGCATCAAG+AGG | 0.631215 | 4.4:+20597767 | None:intergenic |
| AAATTGATCCTGAATTGTCA+AGG | 0.631423 | 4.4:-20602785 | MS.gene35043:CDS |
| GCACCACACGATATGTCTCA+TGG | 0.635950 | 4.4:-20599128 | MS.gene35043:CDS |
| ATATTGAAGCTGAGAATGCG+AGG | 0.642278 | 4.4:-20603070 | MS.gene35043:CDS |
| TCAGAGAGGAGATAGCAAGA+AGG | 0.642604 | 4.4:+20603353 | None:intergenic |
| TGCACAATATCATCGAGCAA+TGG | 0.644083 | 4.4:-20600490 | MS.gene35043:CDS |
| CAAGAAGGAGACTCGCAATG+TGG | 0.644912 | 4.4:+20603368 | None:intergenic |
| AACTTACCAAACTTATCAGG+AGG | 0.646410 | 4.4:+20601029 | None:intergenic |
| TATGAAGAGTAATGGGCCGG+CGG | 0.646689 | 4.4:+20603402 | None:intergenic |
| CAAGTGCCCTCCAATTACCC+GGG | 0.652716 | 4.4:-20600439 | MS.gene35043:CDS |
| TTGGTGGCCCACAACCAGCA+CGG | 0.653038 | 4.4:+20603499 | None:intergenic |
| CCAGAACCAACTCTTCCAGA+AGG | 0.654193 | 4.4:+20602624 | None:intergenic |
| GCTTTGCTGCAGATGCATGG+AGG | 0.654747 | 4.4:-20599160 | MS.gene35043:intron |
| GCAGGGATGCGTCTTTATGG+GGG | 0.654781 | 4.4:-20600513 | MS.gene35043:CDS |
| TGTGATAGAACAGTTGCAGT+GGG | 0.655199 | 4.4:+20598842 | None:intergenic |
| TGTGCTTGAATCAGTTCCAG+AGG | 0.655564 | 4.4:+20598757 | None:intergenic |
| AGAAGTAAAGCTCAGTCACG+TGG | 0.668138 | 4.4:-20598780 | MS.gene35043:CDS |
| GGCTTCCAGTTCAACCACGT+CGG | 0.671549 | 4.4:-20603440 | MS.gene35043:CDS |
| CCATCAAGTGTAGACGCAGG+TGG | 0.674421 | 4.4:+20602684 | None:intergenic |
| TTGTGATAGAACAGTTGCAG+TGG | 0.675737 | 4.4:+20598841 | None:intergenic |
| CCAGATGAGCGAATAAATGG+AGG | 0.675913 | 4.4:-20600851 | MS.gene35043:CDS |
| CTCACCATAATAGACACACC+AGG | 0.677974 | 4.4:-20602972 | MS.gene35043:CDS |
| CATCCATCAAGTGTAGACGC+AGG | 0.679396 | 4.4:+20602681 | None:intergenic |
| GACAGCTGAAACAAAGCTTG+CGG | 0.680189 | 4.4:-20598726 | MS.gene35043:CDS |
| AAGACAAAGAAGAAAACGAG+TGG | 0.685207 | 4.4:-20603592 | MS.gene35043:CDS |
| CCTTGGAGGAGAAATTGGGA+AGG | 0.686239 | 4.4:-20601832 | MS.gene35043:CDS |
| CAGATTCTAGGTCCTCCCGA+AGG | 0.687299 | 4.4:+20597731 | None:intergenic |
| GAGAAGGGTCATCATCAGAG+AGG | 0.690656 | 4.4:+20603339 | None:intergenic |
| GTGGTGGCACCAAAACCCGC+CGG | 0.702784 | 4.4:-20603418 | MS.gene35043:CDS |
| AGACCATGAGACATATCGTG+TGG | 0.704609 | 4.4:+20599125 | None:intergenic |
| CCAATCTGCAACTTTCACTG+GGG | 0.748437 | 4.4:-20597672 | MS.gene35043:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAAATAATTTTTTAAA+AGG | + | chr4.4:20600392-20600411 | None:intergenic | 0.0% |
| !!! | TTATAAATAATTTTTTAAAA+GGG | + | chr4.4:20600391-20600410 | None:intergenic | 0.0% |
| !! | AAAGAATTATATATTAGTTA+GGG | + | chr4.4:20601122-20601141 | None:intergenic | 10.0% |
| !! | TATGAGAAAAAAATATAATT+TGG | - | chr4.4:20602852-20602871 | MS.gene35043:CDS | 10.0% |
| !!! | ATAGTTTAATTCAATTTTAT+CGG | - | chr4.4:20598753-20598772 | MS.gene35043:CDS | 10.0% |
| !!! | ATTTTTTTTTTCTTTTCTTT+TGG | - | chr4.4:20600410-20600429 | MS.gene35043:CDS | 10.0% |
| !!! | TATTTTTTTCTCATAAATTT+TGG | + | chr4.4:20602847-20602866 | None:intergenic | 10.0% |
| !!! | TTAACATAATAATTGATTTA+AGG | - | chr4.4:20602936-20602955 | MS.gene35043:CDS | 10.0% |
| !! | CAAAGAATTATATATTAGTT+AGG | + | chr4.4:20601123-20601142 | None:intergenic | 15.0% |
| !! | TAAGGAAATAATAATAAAAG+TGG | - | chr4.4:20598081-20598100 | MS.gene35043:intron | 15.0% |
| !!! | AAATATTTTGTTATCTTCAT+AGG | - | chr4.4:20599580-20599599 | MS.gene35043:intron | 15.0% |
| !!! | AAGAAATTGATAATAAAAGA+GGG | + | chr4.4:20597817-20597836 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTTTTTTGCCAA+TGG | - | chr4.4:20601533-20601552 | MS.gene35043:intron | 15.0% |
| !!! | TTTAATTTTGAAGAATAGAT+TGG | + | chr4.4:20601375-20601394 | None:intergenic | 15.0% |
| !! | AAAAATGCATAATAAACCAT+TGG | + | chr4.4:20601552-20601571 | None:intergenic | 20.0% |
| !! | AAAACAATTGTATAACTTAC+AGG | + | chr4.4:20600317-20600336 | None:intergenic | 20.0% |
| !! | AAGATAGAAAGGAAAATAAT+AGG | + | chr4.4:20603267-20603286 | None:intergenic | 20.0% |
| !! | AATAGATAATAATCTCTAGA+AGG | + | chr4.4:20603051-20603070 | None:intergenic | 20.0% |
| !! | AATTTGTGATATTAAAACCT+TGG | + | chr4.4:20599768-20599787 | None:intergenic | 20.0% |
| !! | AGATAGAAAGGAAAATAATA+GGG | + | chr4.4:20603266-20603285 | None:intergenic | 20.0% |
| !! | AGTAAAATAATTTCGTAGTT+TGG | - | chr4.4:20601479-20601498 | MS.gene35043:intron | 20.0% |
| !! | ATAATTCACAATTATTGACA+TGG | + | chr4.4:20603240-20603259 | None:intergenic | 20.0% |
| !! | ATATTTCATATGAAGAGTAA+TGG | + | chr4.4:20597705-20597724 | None:intergenic | 20.0% |
| !! | ATGAAACAAACAGAATATTA+AGG | + | chr4.4:20600209-20600228 | None:intergenic | 20.0% |
| !! | ATTACTCTTCATATGAAATA+TGG | - | chr4.4:20597704-20597723 | MS.gene35043:CDS | 20.0% |
| !! | ATTGCATAATTTATATGTCT+TGG | - | chr4.4:20603485-20603504 | MS.gene35043:CDS | 20.0% |
| !! | CTAACAAATTACTAATTGAA+AGG | + | chr4.4:20600918-20600937 | None:intergenic | 20.0% |
| !! | TACTAGAGATAATTATTCAA+TGG | - | chr4.4:20598596-20598615 | MS.gene35043:intron | 20.0% |
| !! | TATTTCATATGAAGAGTAAT+GGG | + | chr4.4:20597704-20597723 | None:intergenic | 20.0% |
| !! | TCAAATAGAACAAAAAACAT+AGG | + | chr4.4:20602901-20602920 | None:intergenic | 20.0% |
| !! | TCATTAAGCAAATATTTGAT+AGG | - | chr4.4:20600536-20600555 | MS.gene35043:intron | 20.0% |
| !! | TTATTATTGCAAAATGTTAG+TGG | - | chr4.4:20598866-20598885 | MS.gene35043:CDS | 20.0% |
| !!! | ACTATGTTTCATTTTTTTGA+AGG | - | chr4.4:20601081-20601100 | MS.gene35043:intron | 20.0% |
| !!! | ATAAATTTTGGATTTGATTG+AGG | + | chr4.4:20602835-20602854 | None:intergenic | 20.0% |
| !!! | ATAGATAATAATCTCTAGAA+GGG | + | chr4.4:20603050-20603069 | None:intergenic | 20.0% |
| !!! | CAAGAAATTGATAATAAAAG+AGG | + | chr4.4:20597818-20597837 | None:intergenic | 20.0% |
| !!! | CTTTCAATTAGTAATTTGTT+AGG | - | chr4.4:20600916-20600935 | MS.gene35043:intron | 20.0% |
| !!! | GTAAGTTATACAATTGTTTT+CGG | - | chr4.4:20600317-20600336 | MS.gene35043:intron | 20.0% |
| !!! | GTTTAAGATTTTGAGATAAT+TGG | - | chr4.4:20601278-20601297 | MS.gene35043:intron | 20.0% |
| !!! | TCTTTAATCCTTTTTTTTAG+AGG | - | chr4.4:20597969-20597988 | MS.gene35043:intron | 20.0% |
| !!! | TGATTAATTTTGACTAAACA+GGG | - | chr4.4:20598001-20598020 | MS.gene35043:intron | 20.0% |
| ! | AAAATTGTGAGGACTAAAAT+GGG | - | chr4.4:20597946-20597965 | MS.gene35043:intron | 25.0% |
| ! | AAGAAGAAGAATAAAAACTC+TGG | + | chr4.4:20599181-20599200 | None:intergenic | 25.0% |
| ! | ACAATATTACTGCATATGTT+TGG | - | chr4.4:20597840-20597859 | MS.gene35043:intron | 25.0% |
| ! | AGATAGAAAATATTTGAGTC+AGG | + | chr4.4:20600009-20600028 | None:intergenic | 25.0% |
| ! | ATACAGAAATTGAACTGAAA+AGG | - | chr4.4:20603460-20603479 | MS.gene35043:CDS | 25.0% |
| ! | ATCTTTGTAAATTGTTCACA+AGG | + | chr4.4:20603515-20603534 | None:intergenic | 25.0% |
| ! | GAAACAAAATGCATAAATAC+AGG | + | chr4.4:20601594-20601613 | None:intergenic | 25.0% |
| ! | GAAGAAGATAAAAAGAGATT+GGG | + | chr4.4:20601196-20601215 | None:intergenic | 25.0% |
| ! | GAATGTAAATGTAAATGTGA+GGG | - | chr4.4:20597905-20597924 | MS.gene35043:intron | 25.0% |
| ! | GATAGAAAATATTTGAGTCA+GGG | + | chr4.4:20600008-20600027 | None:intergenic | 25.0% |
| ! | GATAGAAAGGAAAATAATAG+GGG | + | chr4.4:20603265-20603284 | None:intergenic | 25.0% |
| ! | GTCTAGGTTAAATTCAAATT+AGG | + | chr4.4:20602047-20602066 | None:intergenic | 25.0% |
| ! | GTGATATAAATCAAGAATTG+AGG | - | chr4.4:20599542-20599561 | MS.gene35043:intron | 25.0% |
| ! | GTTAGTGGTTAATTTATCAA+GGG | - | chr4.4:20598881-20598900 | MS.gene35043:CDS | 25.0% |
| ! | TACAGAAATTGAACTGAAAA+GGG | - | chr4.4:20603461-20603480 | MS.gene35043:CDS | 25.0% |
| ! | TATATGCATCTTTATGTGTT+TGG | - | chr4.4:20602545-20602564 | MS.gene35043:intron | 25.0% |
| ! | TATTCTGTTTGTTTCATTTC+AGG | - | chr4.4:20600212-20600231 | MS.gene35043:intron | 25.0% |
| ! | TCTTTGTAAATTGTTCACAA+GGG | + | chr4.4:20603514-20603533 | None:intergenic | 25.0% |
| ! | TGAAGAAGATAAAAAGAGAT+TGG | + | chr4.4:20601197-20601216 | None:intergenic | 25.0% |
| ! | TGAATGTAAATGTAAATGTG+AGG | - | chr4.4:20597904-20597923 | MS.gene35043:intron | 25.0% |
| ! | TGTTAGTGGTTAATTTATCA+AGG | - | chr4.4:20598880-20598899 | MS.gene35043:CDS | 25.0% |
| ! | TTGAAGAAATACTACAAAAG+AGG | - | chr4.4:20599342-20599361 | MS.gene35043:intron | 25.0% |
| ! | TTGGTACAACAAATATTTCA+TGG | - | chr4.4:20602458-20602477 | MS.gene35043:intron | 25.0% |
| ! | TTGTGAACAATTTACAAAGA+TGG | - | chr4.4:20603514-20603533 | MS.gene35043:CDS | 25.0% |
| ! | TTTATACTATAAGAACCTCT+AGG | - | chr4.4:20602082-20602101 | MS.gene35043:intron | 25.0% |
| !! | AAGGAATATTTTCACTTCTA+TGG | + | chr4.4:20600899-20600918 | None:intergenic | 25.0% |
| !! | AAGTGATGATTAACTTTTCA+CGG | + | chr4.4:20601715-20601734 | None:intergenic | 25.0% |
| !! | AATCTCTTTTTATCTTCTTC+AGG | - | chr4.4:20601196-20601215 | MS.gene35043:intron | 25.0% |
| !! | CTTAAAAAAAAGCATACTAG+TGG | + | chr4.4:20599901-20599920 | None:intergenic | 25.0% |
| !! | GAATCTGAAATGAAATGAAA+GGG | + | chr4.4:20598552-20598571 | None:intergenic | 25.0% |
| !! | GCAAATAATATTTTACCTAG+AGG | + | chr4.4:20602100-20602119 | None:intergenic | 25.0% |
| !! | GTGTGGATTTTATATTTGTA+CGG | - | chr4.4:20600473-20600492 | MS.gene35043:CDS | 25.0% |
| !! | TGAATCTGAAATGAAATGAA+AGG | + | chr4.4:20598553-20598572 | None:intergenic | 25.0% |
| !! | TGGTTTATTATGCATTTTTG+TGG | - | chr4.4:20601553-20601572 | MS.gene35043:intron | 25.0% |
| !! | TTTGTTAGCCTCTAAAAAAA+AGG | + | chr4.4:20597980-20597999 | None:intergenic | 25.0% |
| !! | TTTGTTATCTTCATAGGAAA+GGG | - | chr4.4:20599586-20599605 | MS.gene35043:intron | 25.0% |
| !!! | AAAGTTTTTTCTGCTTTTCT+AGG | + | chr4.4:20598804-20598823 | None:intergenic | 25.0% |
| !!! | ACAAGCTTCATTTTAGTTTT+GGG | - | chr4.4:20601830-20601849 | MS.gene35043:CDS | 25.0% |
| !!! | ATTTTTAATTTTGACCAACC+AGG | - | chr4.4:20600803-20600822 | MS.gene35043:CDS | 25.0% |
| !!! | CTGATTAATTTTGACTAAAC+AGG | - | chr4.4:20598000-20598019 | MS.gene35043:intron | 25.0% |
| !!! | TCTTTGTTTTTGATACAGTT+GGG | - | chr4.4:20601137-20601156 | MS.gene35043:intron | 25.0% |
| !!! | TTAGTAATTTGTTAGGACTT+AGG | - | chr4.4:20600923-20600942 | MS.gene35043:intron | 25.0% |
| !!! | TTCTTTGTTTTTGATACAGT+TGG | - | chr4.4:20601136-20601155 | MS.gene35043:intron | 25.0% |
| !!! | TTTTGTTATCTTCATAGGAA+AGG | - | chr4.4:20599585-20599604 | MS.gene35043:intron | 25.0% |
| AAAGATTGTGAGTATCTAAG+TGG | - | chr4.4:20601620-20601639 | MS.gene35043:CDS | 30.0% | |
| AAATTGATCCTGAATTGTCA+AGG | - | chr4.4:20598311-20598330 | MS.gene35043:intron | 30.0% | |
| AAGCATTTACAATTTCTTCC+CGG | + | chr4.4:20600678-20600697 | None:intergenic | 30.0% | |
| ACAACAACAAATTCTACTGT+AGG | + | chr4.4:20599372-20599391 | None:intergenic | 30.0% | |
| ACACCGATAATTGATTGATT+TGG | - | chr4.4:20603198-20603217 | MS.gene35043:intron | 30.0% | |
| ACCCCAAATCAATCAATTAT+CGG | + | chr4.4:20603204-20603223 | None:intergenic | 30.0% | |
| AGCATTATCTACTATTCGTT+AGG | + | chr4.4:20600118-20600137 | None:intergenic | 30.0% | |
| AGGAGCTGATTAAGAATAAA+GGG | - | chr4.4:20600974-20600993 | MS.gene35043:intron | 30.0% | |
| AGTATACAACCTAGAGTATA+TGG | - | chr4.4:20602632-20602651 | MS.gene35043:CDS | 30.0% | |
| AGTATCCGATTATGCTTTAT+TGG | - | chr4.4:20599801-20599820 | MS.gene35043:intron | 30.0% | |
| ATAAACAATCCTTTCAGAAG+AGG | + | chr4.4:20602435-20602454 | None:intergenic | 30.0% | |
| ATAAGTTTGGTAAGTTTCCT+AGG | - | chr4.4:20600074-20600093 | MS.gene35043:intron | 30.0% | |
| ATATAAAATCCACACGAAAG+TGG | + | chr4.4:20600468-20600487 | None:intergenic | 30.0% | |
| CAATAAATCCTAAACTCACA+AGG | + | chr4.4:20599103-20599122 | None:intergenic | 30.0% | |
| CAGTTGAACTGCAAAATATT+AGG | + | chr4.4:20603306-20603325 | None:intergenic | 30.0% | |
| CTTGGTTTCTACAGAATTAA+AGG | - | chr4.4:20602496-20602515 | MS.gene35043:intron | 30.0% | |
| GAAAATTGTGAGGACTAAAA+TGG | - | chr4.4:20597945-20597964 | MS.gene35043:intron | 30.0% | |
| GAAGAAATTGTAAATGCTTG+TGG | - | chr4.4:20600679-20600698 | MS.gene35043:intron | 30.0% | |
| GATCTATTTAGCTGTACTTA+TGG | - | chr4.4:20599201-20599220 | MS.gene35043:intron | 30.0% | |
| GTTAACAATATTAGTACTCC+TGG | - | chr4.4:20601873-20601892 | MS.gene35043:intron | 30.0% | |
| GTTGAATAGGTTAGGTAAAT+AGG | - | chr4.4:20601014-20601033 | MS.gene35043:intron | 30.0% | |
| TAAAACAAGACAACGTGTAT+TGG | + | chr4.4:20598690-20598709 | None:intergenic | 30.0% | |
| TAAACAATCCTTTCAGAAGA+GGG | + | chr4.4:20602434-20602453 | None:intergenic | 30.0% | |
| TAAGCAAATATTTGATAGGC+TGG | - | chr4.4:20600540-20600559 | MS.gene35043:intron | 30.0% | |
| TACTGTGAAATATCTTCAAG+AGG | - | chr4.4:20602785-20602804 | MS.gene35043:CDS | 30.0% | |
| TAGGAGCTGATTAAGAATAA+AGG | - | chr4.4:20600973-20600992 | MS.gene35043:intron | 30.0% | |
| TCAAATTATATTCAGCACAC+TGG | - | chr4.4:20599691-20599710 | MS.gene35043:intron | 30.0% | |
| TCAACTTACACAATTACGTT+AGG | - | chr4.4:20600954-20600973 | MS.gene35043:intron | 30.0% | |
| TCTTGAAGATATTTCACAGT+AGG | + | chr4.4:20602786-20602805 | None:intergenic | 30.0% | |
| TGAAAGGATTGTTTATGGTT+TGG | - | chr4.4:20602439-20602458 | MS.gene35043:intron | 30.0% | |
| TGATTCTCCATTCTTTACTT+CGG | - | chr4.4:20598447-20598466 | MS.gene35043:intron | 30.0% | |
| TGGTTAATTTATCAAGGGTA+GGG | - | chr4.4:20598886-20598905 | MS.gene35043:CDS | 30.0% | |
| TTAATCACCTGATGAAGAAA+AGG | + | chr4.4:20600874-20600893 | None:intergenic | 30.0% | |
| TTCACCCAATAAAGCATAAT+CGG | + | chr4.4:20599809-20599828 | None:intergenic | 30.0% | |
| TTTGAAGAATAGATTGGCAA+CGG | + | chr4.4:20601369-20601388 | None:intergenic | 30.0% | |
| ! | AACCTGTTTGAAATCATCAT+TGG | + | chr4.4:20598518-20598537 | None:intergenic | 30.0% |
| ! | AAGAAGAATTTTTGTCCAAG+AGG | - | chr4.4:20602675-20602694 | MS.gene35043:CDS | 30.0% |
| ! | ACAAAAAACATAGGTTTTCC+AGG | + | chr4.4:20602892-20602911 | None:intergenic | 30.0% |
| ! | AGTAGGTCTGAAATTTACAA+TGG | + | chr4.4:20602769-20602788 | None:intergenic | 30.0% |
| ! | AGTATAAAAGCACACATATG+CGG | + | chr4.4:20599968-20599987 | None:intergenic | 30.0% |
| ! | ATGTTGTCAATTTTCAGCTA+AGG | - | chr4.4:20598063-20598082 | MS.gene35043:intron | 30.0% |
| ! | ATTTGAACCTTTTCTTCATC+AGG | - | chr4.4:20600864-20600883 | MS.gene35043:CDS | 30.0% |
| ! | CACCGATAATTGATTGATTT+GGG | - | chr4.4:20603199-20603218 | MS.gene35043:intron | 30.0% |
| ! | GTATCCGATTATGCTTTATT+GGG | - | chr4.4:20599802-20599821 | MS.gene35043:intron | 30.0% |
| ! | TAGAATATCTAAGATACCGA+AGG | + | chr4.4:20598994-20599013 | None:intergenic | 30.0% |
| ! | TCATGTCAAAAACATTTTCC+AGG | + | chr4.4:20603404-20603423 | None:intergenic | 30.0% |
| ! | TCTTCTGAAAGGATTGTTTA+TGG | - | chr4.4:20602434-20602453 | MS.gene35043:intron | 30.0% |
| ! | TGGATTTTATATTTGTACGG+AGG | - | chr4.4:20600476-20600495 | MS.gene35043:CDS | 30.0% |
| !! | AAAGGGAATTTTGAGTAGTT+AGG | - | chr4.4:20600991-20601010 | MS.gene35043:intron | 30.0% |
| !! | AAGGGAATTTTGAGTAGTTA+GGG | - | chr4.4:20600992-20601011 | MS.gene35043:intron | 30.0% |
| !! | ACCGATAATTGATTGATTTG+GGG | - | chr4.4:20603200-20603219 | MS.gene35043:intron | 30.0% |
| !! | TAGATAGTACACTTTGGAAT+CGG | - | chr4.4:20602399-20602418 | MS.gene35043:intron | 30.0% |
| !!! | CACAAGCTTCATTTTAGTTT+TGG | - | chr4.4:20601829-20601848 | MS.gene35043:CDS | 30.0% |
| !!! | CTTTGTTTTTGATACAGTTG+GGG | - | chr4.4:20601138-20601157 | MS.gene35043:intron | 30.0% |
| AAAACATCAGACAGTGTGAT+TGG | - | chr4.4:20598627-20598646 | MS.gene35043:CDS | 35.0% | |
| AAAAGAAATCTCACTGTCTC+AGG | - | chr4.4:20600145-20600164 | MS.gene35043:intron | 35.0% | |
| AAAATAGTAAGCAGACAACC+AGG | + | chr4.4:20601894-20601913 | None:intergenic | 35.0% | |
| AACTTACCAAACTTATCAGG+AGG | + | chr4.4:20600070-20600089 | None:intergenic | 35.0% | |
| AAGACAAAGAAGAAAACGAG+TGG | - | chr4.4:20597504-20597523 | MS.gene35043:CDS | 35.0% | |
| AAGCAAGAAAGAAGTAGGAT+AGG | - | chr4.4:20599296-20599315 | MS.gene35043:intron | 35.0% | |
| AAGGAGTTACATGCATAGAT+AGG | - | chr4.4:20601053-20601072 | MS.gene35043:CDS | 35.0% | |
| ACAAACAAATGTGCAAGAGA+AGG | - | chr4.4:20602274-20602293 | MS.gene35043:intron | 35.0% | |
| ACATATGGTGAGAAAGAGAA+GGG | + | chr4.4:20597775-20597794 | None:intergenic | 35.0% | |
| ACCTTCTAGATAGTACACTT+TGG | - | chr4.4:20602393-20602412 | MS.gene35043:intron | 35.0% | |
| AGAAAATATTTGAGTCAGGG+AGG | + | chr4.4:20600005-20600024 | None:intergenic | 35.0% | |
| AGCATTTACAATTTCTTCCC+GGG | + | chr4.4:20600677-20600696 | None:intergenic | 35.0% | |
| AGGAAAACTTCAACATCAGA+AGG | + | chr4.4:20598388-20598407 | None:intergenic | 35.0% | |
| AGTTACATGCATAGATAGGA+AGG | - | chr4.4:20601057-20601076 | MS.gene35043:CDS | 35.0% | |
| ATCTCCTTTCTCTTGGTAAA+TGG | - | chr4.4:20600170-20600189 | MS.gene35043:intron | 35.0% | |
| CAAACTTCACCATATACTCT+AGG | + | chr4.4:20602644-20602663 | None:intergenic | 35.0% | |
| CACCAAATGAATCTAAGAAC+TGG | + | chr4.4:20602205-20602224 | None:intergenic | 35.0% | |
| CAGTTCTTAGATTCATTTGG+TGG | - | chr4.4:20602203-20602222 | MS.gene35043:intron | 35.0% | |
| CATCTTCAAAAGCAGATTCT+AGG | + | chr4.4:20603380-20603399 | None:intergenic | 35.0% | |
| CTCCAATGATGATTTCAAAC+AGG | - | chr4.4:20598513-20598532 | MS.gene35043:intron | 35.0% | |
| CTTCTTTCTTGCTTTGACAA+TGG | + | chr4.4:20599290-20599309 | None:intergenic | 35.0% | |
| CTTTATGAACCAGTGGTTTA+GGG | - | chr4.4:20601331-20601350 | MS.gene35043:intron | 35.0% | |
| GAGTATATGGTGAAGTTTGA+TGG | - | chr4.4:20602645-20602664 | MS.gene35043:CDS | 35.0% | |
| GCAGTGCATAAAAGATAGAA+AGG | + | chr4.4:20603278-20603297 | None:intergenic | 35.0% | |
| GGAAACTTACCAAACTTATC+AGG | + | chr4.4:20600073-20600092 | None:intergenic | 35.0% | |
| GGGTGAATTTCTTCTATTGA+TGG | - | chr4.4:20599822-20599841 | MS.gene35043:intron | 35.0% | |
| GGTTAATTTATCAAGGGTAG+GGG | - | chr4.4:20598887-20598906 | MS.gene35043:CDS | 35.0% | |
| GTCTTGAAGATTGTAGTGAT+TGG | - | chr4.4:20598257-20598276 | MS.gene35043:intron | 35.0% | |
| GTGGTTAATTTATCAAGGGT+AGG | - | chr4.4:20598885-20598904 | MS.gene35043:CDS | 35.0% | |
| GTGTCTATTATGGTGAGATT+AGG | + | chr4.4:20598121-20598140 | None:intergenic | 35.0% | |
| GTTACCATTTACCAAGAGAA+AGG | + | chr4.4:20600177-20600196 | None:intergenic | 35.0% | |
| TAAATGTGAGGGACCAAATT+GGG | - | chr4.4:20597916-20597935 | MS.gene35043:intron | 35.0% | |
| TACCTAGCAAGTTCATTCTT+AGG | + | chr4.4:20599454-20599473 | None:intergenic | 35.0% | |
| TAGTTAGGGTTGAATAGGTT+AGG | - | chr4.4:20601006-20601025 | MS.gene35043:intron | 35.0% | |
| TCAAGAAGTGGAATGATCAA+CGG | + | chr4.4:20599490-20599509 | None:intergenic | 35.0% | |
| TCATGATATGTTCTTGACCA+AGG | - | chr4.4:20599748-20599767 | MS.gene35043:intron | 35.0% | |
| TCCAAAGTGTACTATCTAGA+AGG | + | chr4.4:20602397-20602416 | None:intergenic | 35.0% | |
| TGCGGGTTCAAATCAAATAT+TGG | + | chr4.4:20599950-20599969 | None:intergenic | 35.0% | |
| TGGAAGGAAACTAAGCAATT+GGG | + | chr4.4:20601741-20601760 | None:intergenic | 35.0% | |
| TGGACAGATAAGTAAACTAG+TGG | + | chr4.4:20599930-20599949 | None:intergenic | 35.0% | |
| TGGCATACGAGAATATTTCT+TGG | - | chr4.4:20602478-20602497 | MS.gene35043:intron | 35.0% | |
| TGTCAAAGCAAGAAAGAAGT+AGG | - | chr4.4:20599291-20599310 | MS.gene35043:intron | 35.0% | |
| TGTGATTGTTTCGACTAAGT+TGG | - | chr4.4:20598336-20598355 | MS.gene35043:intron | 35.0% | |
| TTACCAGATGAGCGAATAAA+TGG | - | chr4.4:20600242-20600261 | MS.gene35043:CDS | 35.0% | |
| TTCCATGATGTCTAACTCTT+TGG | - | chr4.4:20603552-20603571 | MS.gene35043:CDS | 35.0% | |
| TTGAGTAGTTAGGGTTGAAT+AGG | - | chr4.4:20601001-20601020 | MS.gene35043:intron | 35.0% | |
| TTGTAATTACCACTTTCGTG+TGG | - | chr4.4:20600456-20600475 | MS.gene35043:CDS | 35.0% | |
| TTTCTTCTTTGTCTTGGAGT+TGG | + | chr4.4:20597499-20597518 | None:intergenic | 35.0% | |
| ! | AATTTTCTCGCAACCCAATT+TGG | + | chr4.4:20597932-20597951 | None:intergenic | 35.0% |
| ! | ACTCGTTTTCTTCTTTGTCT+TGG | + | chr4.4:20597505-20597524 | None:intergenic | 35.0% |
| ! | AGGTTAGCTGGTTAGTTAAA+AGG | - | chr4.4:20601034-20601053 | MS.gene35043:intron | 35.0% |
| ! | ATAAATGGAGGTGCATTTGT+TGG | - | chr4.4:20600257-20600276 | MS.gene35043:CDS | 35.0% |
| ! | ATCCTAAGAATGAACTTGCT+AGG | - | chr4.4:20599449-20599468 | MS.gene35043:CDS | 35.0% |
| ! | ATGATGGAACAAACTACTCT+AGG | - | chr4.4:20600716-20600735 | MS.gene35043:intron | 35.0% |
| ! | CCTGAAATTGAAGCTTGTTT+GGG | - | chr4.4:20602600-20602619 | MS.gene35043:CDS | 35.0% |
| ! | CTGTTTGAAATCATCATTGG+AGG | + | chr4.4:20598515-20598534 | None:intergenic | 35.0% |
| ! | GAATTTCGTTTTGTAGTTGG+AGG | - | chr4.4:20600631-20600650 | MS.gene35043:intron | 35.0% |
| ! | GCTGAATTTCGTTTTGTAGT+TGG | - | chr4.4:20600628-20600647 | MS.gene35043:intron | 35.0% |
| ! | GTATAAAAGCACACATATGC+GGG | + | chr4.4:20599967-20599986 | None:intergenic | 35.0% |
| ! | TTGATAATAAAAGAGGGACC+TGG | + | chr4.4:20597811-20597830 | None:intergenic | 35.0% |
| ! | TTGTGTAATTGCTGTTGCAA+AGG | - | chr4.4:20600831-20600850 | MS.gene35043:CDS | 35.0% |
| ! | TTTCGACTAAGTTGGATACT+AGG | - | chr4.4:20598344-20598363 | MS.gene35043:intron | 35.0% |
| !! | AGTTATGTCGCTTTCTTTCA+CGG | + | chr4.4:20599070-20599089 | None:intergenic | 35.0% |
| !! | TCAATTTTATCGGTTACTGC+TGG | - | chr4.4:20598763-20598782 | MS.gene35043:CDS | 35.0% |
| !! | TTACAGGTATTAGCTTGTGA+GGG | + | chr4.4:20600301-20600320 | None:intergenic | 35.0% |
| ACAATTTCTTCCCGGGTAAT+TGG | + | chr4.4:20600670-20600689 | None:intergenic | 40.0% | |
| ACACTAAAGGAGTTGTGTGT+AGG | + | chr4.4:20598947-20598966 | None:intergenic | 40.0% | |
| ACAGACTGTCATACAAGTCT+AGG | + | chr4.4:20602063-20602082 | None:intergenic | 40.0% | |
| ACCAATCTGCAACTTTCACT+GGG | - | chr4.4:20603423-20603442 | MS.gene35043:CDS | 40.0% | |
| AGAATCAAACCCTAAACCAC+TGG | + | chr4.4:20601343-20601362 | None:intergenic | 40.0% | |
| AGCAAAGCAGCATGGAAAAA+TGG | + | chr4.4:20601924-20601943 | None:intergenic | 40.0% | |
| AGTGGGATCATTACAAGCAT+TGG | + | chr4.4:20602240-20602259 | None:intergenic | 40.0% | |
| ATAAAAGAGGGACCTGGATT+TGG | + | chr4.4:20597805-20597824 | None:intergenic | 40.0% | |
| ATATTGAAGCTGAGAATGCG+AGG | - | chr4.4:20598026-20598045 | MS.gene35043:intron | 40.0% | |
| ATCACAGTCCTTGACAATTC+AGG | + | chr4.4:20598322-20598341 | None:intergenic | 40.0% | |
| ATCCTTCTCTGTAGAATGCA+GGG | - | chr4.4:20600566-20600585 | MS.gene35043:intron | 40.0% | |
| ATCTTCACACAAGAGCTTGA+AGG | + | chr4.4:20601442-20601461 | None:intergenic | 40.0% | |
| ATTAGAACTCCTACCAAGGA+AGG | - | chr4.4:20599847-20599866 | MS.gene35043:intron | 40.0% | |
| CAAGGAAGGGCTATTTAATC+TGG | - | chr4.4:20599861-20599880 | MS.gene35043:intron | 40.0% | |
| CACCAAAGAGTTAGACATCA+TGG | + | chr4.4:20603557-20603576 | None:intergenic | 40.0% | |
| CAGATTAAATAGCCCTTCCT+TGG | + | chr4.4:20599863-20599882 | None:intergenic | 40.0% | |
| CATGATGTCTAACTCTTTGG+TGG | - | chr4.4:20603555-20603574 | MS.gene35043:CDS | 40.0% | |
| CCCAAACAAGCTTCAATTTC+AGG | + | chr4.4:20602603-20602622 | None:intergenic | 40.0% | |
| CCTTTATGAACCAGTGGTTT+AGG | - | chr4.4:20601330-20601349 | MS.gene35043:intron | 40.0% | |
| CGCCAGTTCTTAGATTCATT+TGG | - | chr4.4:20602200-20602219 | MS.gene35043:intron | 40.0% | |
| CTCATGGTCTCTACACAATA+AGG | - | chr4.4:20601984-20602003 | MS.gene35043:intron | 40.0% | |
| GAAGGAAACTAAGCAATTGG+GGG | + | chr4.4:20601739-20601758 | None:intergenic | 40.0% | |
| GACATATGGTGAGAAAGAGA+AGG | + | chr4.4:20597776-20597795 | None:intergenic | 40.0% | |
| GATAGAAGATGTTGCATCCT+TGG | - | chr4.4:20599247-20599266 | MS.gene35043:intron | 40.0% | |
| GATCATTCCACTTCTTGAGA+AGG | - | chr4.4:20599492-20599511 | MS.gene35043:intron | 40.0% | |
| GCTTCAATTTCAGGCAAGAA+AGG | + | chr4.4:20602594-20602613 | None:intergenic | 40.0% | |
| GGAAGGAAACTAAGCAATTG+GGG | + | chr4.4:20601740-20601759 | None:intergenic | 40.0% | |
| GGAGTTGAAGACATTCATGA+TGG | - | chr4.4:20600700-20600719 | MS.gene35043:intron | 40.0% | |
| GGATATTAGAACTCCTACCA+AGG | - | chr4.4:20599843-20599862 | MS.gene35043:intron | 40.0% | |
| GGTTAGGTAAATAGGTTAGC+TGG | - | chr4.4:20601022-20601041 | MS.gene35043:intron | 40.0% | |
| GTAAATGTGAGGGACCAAAT+TGG | - | chr4.4:20597915-20597934 | MS.gene35043:intron | 40.0% | |
| GTGGAAGGAAACTAAGCAAT+TGG | + | chr4.4:20601742-20601761 | None:intergenic | 40.0% | |
| TAAAAGAGGGACCTGGATTT+GGG | + | chr4.4:20597804-20597823 | None:intergenic | 40.0% | |
| TAGTCCTGGTGTGTCTATTA+TGG | + | chr4.4:20598131-20598150 | None:intergenic | 40.0% | |
| TATCCTTCTCTGTAGAATGC+AGG | - | chr4.4:20600565-20600584 | MS.gene35043:intron | 40.0% | |
| TATCTTCATAGGAAAGGGCA+GGG | - | chr4.4:20599591-20599610 | MS.gene35043:intron | 40.0% | |
| TCAATTTCAGGCAAGAAAGG+AGG | + | chr4.4:20602591-20602610 | None:intergenic | 40.0% | |
| TCAGAAGGACGTGAAAATTG+TGG | + | chr4.4:20598373-20598392 | None:intergenic | 40.0% | |
| TCAGGATATCTCCTTTCTCT+TGG | - | chr4.4:20600163-20600182 | MS.gene35043:intron | 40.0% | |
| TCGTAAAAATAGGGCCATAC+AGG | - | chr4.4:20598168-20598187 | MS.gene35043:intron | 40.0% | |
| TCTTCACACAAGAGCTTGAA+GGG | + | chr4.4:20601441-20601460 | None:intergenic | 40.0% | |
| TCTTCCTTTCTCCTTCAACT+TGG | + | chr4.4:20599723-20599742 | None:intergenic | 40.0% | |
| TGCACAATATCATCGAGCAA+TGG | - | chr4.4:20600606-20600625 | MS.gene35043:intron | 40.0% | |
| TGCACCAGGTCGTAAAAATA+GGG | - | chr4.4:20598159-20598178 | MS.gene35043:intron | 40.0% | |
| TGCAGTAGCAGTTGTATTCA+GGG | - | chr4.4:20599121-20599140 | MS.gene35043:CDS | 40.0% | |
| TGTGATAGAACAGTTGCAGT+GGG | + | chr4.4:20602257-20602276 | None:intergenic | 40.0% | |
| TTAAATAGCCCTTCCTTGGT+AGG | + | chr4.4:20599859-20599878 | None:intergenic | 40.0% | |
| TTAGAACTCCTACCAAGGAA+GGG | - | chr4.4:20599848-20599867 | MS.gene35043:intron | 40.0% | |
| TTAGCTGTACTTATGGATGC+AGG | - | chr4.4:20599208-20599227 | MS.gene35043:intron | 40.0% | |
| TTATCCACAAATGAGAGCCT+AGG | + | chr4.4:20600094-20600113 | None:intergenic | 40.0% | |
| TTATCTTCATAGGAAAGGGC+AGG | - | chr4.4:20599590-20599609 | MS.gene35043:intron | 40.0% | |
| TTGCAGTAGCAGTTGTATTC+AGG | - | chr4.4:20599120-20599139 | MS.gene35043:CDS | 40.0% | |
| TTGTGATAGAACAGTTGCAG+TGG | + | chr4.4:20602258-20602277 | None:intergenic | 40.0% | |
| ! | AAGACAACGTGTATTGGCAA+TGG | + | chr4.4:20598684-20598703 | None:intergenic | 40.0% |
| ! | ACACTTGATGGATGCATTCT+TGG | - | chr4.4:20598424-20598443 | MS.gene35043:intron | 40.0% |
| ! | AGCTGTCATTGCTGCTTAAA+GGG | - | chr4.4:20600032-20600051 | MS.gene35043:intron | 40.0% |
| ! | CTGAGCTTTACTTCTAGTTG+TGG | + | chr4.4:20602311-20602330 | None:intergenic | 40.0% |
| ! | CTTTATGTGTTTGGTGACTC+TGG | - | chr4.4:20602554-20602573 | MS.gene35043:intron | 40.0% |
| ! | GCCTGAAATTGAAGCTTGTT+TGG | - | chr4.4:20602599-20602618 | MS.gene35043:CDS | 40.0% |
| !! | AAGCTTTGTTTCAGCTGTCT+GGG | + | chr4.4:20602369-20602388 | None:intergenic | 40.0% |
| !! | ATAGTACACTTTGGAATCGG+AGG | - | chr4.4:20602402-20602421 | MS.gene35043:intron | 40.0% |
| !! | ATCTGCTTTTGAAGATGACC+TGG | - | chr4.4:20603383-20603402 | MS.gene35043:CDS | 40.0% |
| !! | ATTTTATCGGTTACTGCTGG+TGG | - | chr4.4:20598766-20598785 | MS.gene35043:CDS | 40.0% |
| !! | CATAGCGTTGATTGGTGAAT+TGG | + | chr4.4:20599030-20599049 | None:intergenic | 40.0% |
| !! | CCTAAACCACTGGTTCATAA+AGG | + | chr4.4:20601333-20601352 | None:intergenic | 40.0% |
| !! | CTTACAGGTATTAGCTTGTG+AGG | + | chr4.4:20600302-20600321 | None:intergenic | 40.0% |
| !! | TCATATGAAGAGTAATGGGC+CGG | + | chr4.4:20597700-20597719 | None:intergenic | 40.0% |
| !! | TTCACGGCATGATTTTTCAG+TGG | + | chr4.4:20601699-20601718 | None:intergenic | 40.0% |
| !! | TTTCAGCACATAGCGTTGAT+TGG | + | chr4.4:20599038-20599057 | None:intergenic | 40.0% |
| !!! | ACTGCCAACTTTTTAGAGTC+GGG | - | chr4.4:20602169-20602188 | MS.gene35043:intron | 40.0% |
| !!! | CACTGCCAACTTTTTAGAGT+CGG | - | chr4.4:20602168-20602187 | MS.gene35043:intron | 40.0% |
| AAGAAGGAGACTCGCAATGT+GGG | + | chr4.4:20597730-20597749 | None:intergenic | 45.0% | |
| AATGCAGGGATGCGTCTTTA+TGG | - | chr4.4:20600580-20600599 | MS.gene35043:intron | 45.0% | |
| AATTTGCATTACAACGCGCC+TGG | + | chr4.4:20598296-20598315 | None:intergenic | 45.0% | |
| AGAAGATGTTGCATCCTTGG+AGG | - | chr4.4:20599250-20599269 | MS.gene35043:intron | 45.0% | |
| AGAAGTAAAGCTCAGTCACG+TGG | - | chr4.4:20602316-20602335 | MS.gene35043:intron | 45.0% | |
| AGACCATGAGACATATCGTG+TGG | + | chr4.4:20601974-20601993 | None:intergenic | 45.0% | |
| AGAGAGCCTTTATGAACCAG+TGG | - | chr4.4:20601324-20601343 | MS.gene35043:intron | 45.0% | |
| AGCAATTACACAAGCAGTCC+TGG | + | chr4.4:20600824-20600843 | None:intergenic | 45.0% | |
| AGTTGTGTGTAGGAGGTTTG+CGG | + | chr4.4:20598937-20598956 | None:intergenic | 45.0% | |
| ATCCCTGCATTCTACAGAGA+AGG | + | chr4.4:20600571-20600590 | None:intergenic | 45.0% | |
| ATGCAGGGATGCGTCTTTAT+GGG | - | chr4.4:20600581-20600600 | MS.gene35043:intron | 45.0% | |
| ATTACACAAGCAGTCCTGGT+TGG | + | chr4.4:20600820-20600839 | None:intergenic | 45.0% | |
| ATTTCTTCCCGGGTAATTGG+AGG | + | chr4.4:20600667-20600686 | None:intergenic | 45.0% | |
| CACACATGCAACATAGCTTC+AGG | - | chr4.4:20602997-20603016 | MS.gene35043:CDS | 45.0% | |
| CAGTAGCAGTTGTATTCAGG+GGG | - | chr4.4:20599123-20599142 | MS.gene35043:CDS | 45.0% | |
| CATAAGCAGAAAGAGCCTCT+TGG | + | chr4.4:20602693-20602712 | None:intergenic | 45.0% | |
| CCAATCTGCAACTTTCACTG+GGG | - | chr4.4:20603424-20603443 | MS.gene35043:CDS | 45.0% | |
| CCAGATGAGCGAATAAATGG+AGG | - | chr4.4:20600245-20600264 | MS.gene35043:CDS | 45.0% | |
| CCTAAACTCACAAGGATCCA+GGG | + | chr4.4:20599095-20599114 | None:intergenic | 45.0% | |
| CCTCCATTTATTCGCTCATC+TGG | + | chr4.4:20600248-20600267 | None:intergenic | 45.0% | |
| CTAAAGGAGTTGTGTGTAGG+AGG | + | chr4.4:20598944-20598963 | None:intergenic | 45.0% | |
| CTCACCATAATAGACACACC+AGG | - | chr4.4:20598124-20598143 | MS.gene35043:intron | 45.0% | |
| CTGAAGCTATGTTGCATGTG+TGG | + | chr4.4:20602999-20603018 | None:intergenic | 45.0% | |
| CTGCACCAGGTCGTAAAAAT+AGG | - | chr4.4:20598158-20598177 | MS.gene35043:intron | 45.0% | |
| CTTTGTCTTGGAGTTGGAGT+TGG | + | chr4.4:20597493-20597512 | None:intergenic | 45.0% | |
| GACAGCTGAAACAAAGCTTG+CGG | - | chr4.4:20602370-20602389 | MS.gene35043:intron | 45.0% | |
| GACCAATCTGCAACTTTCAC+TGG | - | chr4.4:20603422-20603441 | MS.gene35043:CDS | 45.0% | |
| GCAGGCAACTTATCCACAAT+GGG | + | chr4.4:20603342-20603361 | None:intergenic | 45.0% | |
| GCAGTAGCAGTTGTATTCAG+GGG | - | chr4.4:20599122-20599141 | MS.gene35043:CDS | 45.0% | |
| GCATCCTTGGAGGAGAAATT+GGG | - | chr4.4:20599260-20599279 | MS.gene35043:intron | 45.0% | |
| GCCTTAGTTGAGGCTCTTAT+GGG | - | chr4.4:20597635-20597654 | MS.gene35043:intron | 45.0% | |
| GGATAGGTGTGAGCAAACTT+AGG | - | chr4.4:20599312-20599331 | MS.gene35043:intron | 45.0% | |
| GGATTCTGCAAAGTTGTCGA+AGG | + | chr4.4:20601678-20601697 | None:intergenic | 45.0% | |
| GGATTTGGGAAAGGGACATA+TGG | + | chr4.4:20597790-20597809 | None:intergenic | 45.0% | |
| GGGGCGAATGTTATTAGTAG+AGG | - | chr4.4:20598906-20598925 | MS.gene35043:CDS | 45.0% | |
| GTTTCCTAGGCTCTCATTTG+TGG | - | chr4.4:20600087-20600106 | MS.gene35043:intron | 45.0% | |
| TATCCACAATGGGCATCAAG+AGG | + | chr4.4:20603332-20603351 | None:intergenic | 45.0% | |
| TATGTCCCTTTCCCAAATCC+AGG | - | chr4.4:20597790-20597809 | MS.gene35043:intron | 45.0% | |
| TCAGAGAGGAGATAGCAAGA+AGG | + | chr4.4:20597746-20597765 | None:intergenic | 45.0% | |
| TCCTAAACTCACAAGGATCC+AGG | + | chr4.4:20599096-20599115 | None:intergenic | 45.0% | |
| TCGTGCAAAAATGCAGCACA+AGG | - | chr4.4:20598219-20598238 | MS.gene35043:intron | 45.0% | |
| TGAGTATCTAAGTGGCCATC+AGG | - | chr4.4:20601628-20601647 | MS.gene35043:CDS | 45.0% | |
| TGCAGGCAACTTATCCACAA+TGG | + | chr4.4:20603343-20603362 | None:intergenic | 45.0% | |
| TGCATCCTTGGAGGAGAAAT+TGG | - | chr4.4:20599259-20599278 | MS.gene35043:intron | 45.0% | |
| TGGGTTGCGAGAAAATTGTG+AGG | - | chr4.4:20597935-20597954 | MS.gene35043:intron | 45.0% | |
| TGTGCTTGAATCAGTTCCAG+AGG | + | chr4.4:20602342-20602361 | None:intergenic | 45.0% | |
| TTGGTAGAAACATCAGAGCC+TGG | - | chr4.4:20602871-20602890 | MS.gene35043:CDS | 45.0% | |
| TTTCCTCTTGATGCCCATTG+TGG | - | chr4.4:20603326-20603345 | MS.gene35043:CDS | 45.0% | |
| TTTCTTCCCGGGTAATTGGA+GGG | + | chr4.4:20600666-20600685 | None:intergenic | 45.0% | |
| ! | ACTGGATGAAGCCAAGTTGA+AGG | - | chr4.4:20599709-20599728 | MS.gene35043:intron | 45.0% |
| ! | ATAGCTTCAGGTTCAGCACA+AGG | - | chr4.4:20603009-20603028 | MS.gene35043:CDS | 45.0% |
| ! | CACTTCTTGAGAAGGAGCAT+CGG | - | chr4.4:20599500-20599519 | MS.gene35043:intron | 45.0% |
| ! | CAGCTGTCATTGCTGCTTAA+AGG | - | chr4.4:20600031-20600050 | MS.gene35043:intron | 45.0% |
| ! | CGACTCTAAAAAGTTGGCAG+TGG | + | chr4.4:20602170-20602189 | None:intergenic | 45.0% |
| ! | GAAGCCAAGTTGAAGGAGAA+AGG | - | chr4.4:20599716-20599735 | MS.gene35043:intron | 45.0% |
| ! | GGCATGGGTTAAGACACTAA+AGG | + | chr4.4:20598960-20598979 | None:intergenic | 45.0% |
| !! | CAAGCTTTGTTTCAGCTGTC+TGG | + | chr4.4:20602370-20602389 | None:intergenic | 45.0% |
| !! | GAAGGCACCGAAGTAAAGAA+TGG | + | chr4.4:20598457-20598476 | None:intergenic | 45.0% |
| !! | TGGTGGTTTTGCAGATCAAG+AGG | - | chr4.4:20603572-20603591 | MS.gene35043:CDS | 45.0% |
| !! | TTCTTTACTTCGGTGCCTTC+TGG | - | chr4.4:20598457-20598476 | MS.gene35043:intron | 45.0% |
| !!! | ATGGCCCTATTTTTACGACC+TGG | + | chr4.4:20598166-20598185 | None:intergenic | 45.0% |
| !!! | CTATTTTTACGACCTGGTGC+AGG | + | chr4.4:20598160-20598179 | None:intergenic | 45.0% |
| !! | ATAATAATAATAATAATACA+AGG | + | chr4.4:20603090-20603109 | None:intergenic | 5.0% |
| !! | TATATAAAAAATAATAATGA+TGG | + | chr4.4:20599417-20599436 | None:intergenic | 5.0% |
| !!! | TATAAATAATTTTTTAAAAG+GGG | + | chr4.4:20600390-20600409 | None:intergenic | 5.0% |
| AAATAGGGCCATACAGGCAC+AGG | - | chr4.4:20598174-20598193 | MS.gene35043:intron | 50.0% | |
| AGGGACCTGGATTTGGGAAA+GGG | + | chr4.4:20597798-20597817 | None:intergenic | 50.0% | |
| AGTGTCTTAACCCATGCCAC+TGG | - | chr4.4:20598962-20598981 | MS.gene35043:intron | 50.0% | |
| ATAAGTTGCCTGCACGCCTT+CGG | - | chr4.4:20603349-20603368 | MS.gene35043:CDS | 50.0% | |
| ATTGGAGCAACGCAACTACC+AGG | - | chr4.4:20598275-20598294 | MS.gene35043:intron | 50.0% | |
| CAAGAAGGAGACTCGCAATG+TGG | + | chr4.4:20597731-20597750 | None:intergenic | 50.0% | |
| CATCCATCAAGTGTAGACGC+AGG | + | chr4.4:20598418-20598437 | None:intergenic | 50.0% | |
| CCAGAACCAACTCTTCCAGA+AGG | + | chr4.4:20598475-20598494 | None:intergenic | 50.0% | |
| CCCCAGTGAAAGTTGCAGAT+TGG | + | chr4.4:20603427-20603446 | None:intergenic | 50.0% | |
| CCCTGGATCCTTGTGAGTTT+AGG | - | chr4.4:20599092-20599111 | MS.gene35043:intron | 50.0% | |
| CCTTCCCAATTTCTCCTCCA+AGG | + | chr4.4:20599267-20599286 | None:intergenic | 50.0% | |
| CCTTGGAGGAGAAATTGGGA+AGG | - | chr4.4:20599264-20599283 | MS.gene35043:intron | 50.0% | |
| CGATGCTCCTTCTCAAGAAG+TGG | + | chr4.4:20599502-20599521 | None:intergenic | 50.0% | |
| CGCCTTAGTTGAGGCTCTTA+TGG | - | chr4.4:20597634-20597653 | MS.gene35043:intron | 50.0% | |
| GAAAGCGACATAACTAGCCC+TGG | - | chr4.4:20599075-20599094 | MS.gene35043:intron | 50.0% | |
| GAGAAGGGTCATCATCAGAG+AGG | + | chr4.4:20597760-20597779 | None:intergenic | 50.0% | |
| GCACCACACGATATGTCTCA+TGG | - | chr4.4:20601968-20601987 | MS.gene35043:intron | 50.0% | |
| GCCCATAAGAGCCTCAACTA+AGG | + | chr4.4:20597639-20597658 | None:intergenic | 50.0% | |
| GTGAGGGAACTGAACACCAT+CGG | + | chr4.4:20600285-20600304 | None:intergenic | 50.0% | |
| GTGTCTTAACCCATGCCACT+GGG | - | chr4.4:20598963-20598982 | MS.gene35043:intron | 50.0% | |
| TCAAGTGCCCTCCAATTACC+CGG | - | chr4.4:20600656-20600675 | MS.gene35043:intron | 50.0% | |
| TGAAGCTGAGAATGCGAGGT+TGG | - | chr4.4:20598030-20598049 | MS.gene35043:intron | 50.0% | |
| TGCAAAGTTGTCGAAGGCAG+AGG | + | chr4.4:20601672-20601691 | None:intergenic | 50.0% | |
| TGCAGGGATGCGTCTTTATG+GGG | - | chr4.4:20600582-20600601 | MS.gene35043:intron | 50.0% | |
| TGTCTTGGAGTTGGAGTTGG+TGG | + | chr4.4:20597490-20597509 | None:intergenic | 50.0% | |
| ! | CCTGCCCGACTCTAAAAAGT+TGG | + | chr4.4:20602176-20602195 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGAGTTGGTTC+TGG | - | chr4.4:20598472-20598491 | MS.gene35043:intron | 50.0% |
| ! | CTTTGTTTCAGCTGTCTGGG+TGG | + | chr4.4:20602366-20602385 | None:intergenic | 50.0% |
| !! | TATGAAGAGTAATGGGCCGG+CGG | + | chr4.4:20597697-20597716 | None:intergenic | 50.0% |
| !!! | CCAACTTTTTAGAGTCGGGC+AGG | - | chr4.4:20602173-20602192 | MS.gene35043:intron | 50.0% |
| AAGGAGTAGCCCAGTGGCAT+GGG | + | chr4.4:20598975-20598994 | None:intergenic | 55.0% | |
| AGCAGTTGTATTCAGGGGGC+TGG | - | chr4.4:20599127-20599146 | MS.gene35043:CDS | 55.0% | |
| ATACCGAAGGAGTAGCCCAG+TGG | + | chr4.4:20598981-20599000 | None:intergenic | 55.0% | |
| ATGCCACTGGGCTACTCCTT+CGG | - | chr4.4:20598975-20598994 | MS.gene35043:intron | 55.0% | |
| CAAGTGCCCTCCAATTACCC+GGG | - | chr4.4:20600657-20600676 | MS.gene35043:intron | 55.0% | |
| CAGATTCTAGGTCCTCCCGA+AGG | + | chr4.4:20603368-20603387 | None:intergenic | 55.0% | |
| CCACCTGCGTCTACACTTGA+TGG | - | chr4.4:20598412-20598431 | MS.gene35043:intron | 55.0% | |
| CCATCAAGTGTAGACGCAGG+TGG | + | chr4.4:20598415-20598434 | None:intergenic | 55.0% | |
| CTGCAGATGCATGGAGGACT+TGG | - | chr4.4:20601942-20601961 | MS.gene35043:intron | 55.0% | |
| GAGGGACCTGGATTTGGGAA+AGG | + | chr4.4:20597799-20597818 | None:intergenic | 55.0% | |
| GCAGGGATGCGTCTTTATGG+GGG | - | chr4.4:20600583-20600602 | MS.gene35043:intron | 55.0% | |
| GCATCTGCAGCAAAGCAGCA+TGG | + | chr4.4:20601932-20601951 | None:intergenic | 55.0% | |
| GCTTTGCTGCAGATGCATGG+AGG | - | chr4.4:20601936-20601955 | MS.gene35043:intron | 55.0% | |
| GGCTTCCAGTTCAACCACGT+CGG | - | chr4.4:20597656-20597675 | MS.gene35043:CDS | 55.0% | |
| GGCTTGCACCCTCTTCTGAA+AGG | - | chr4.4:20602423-20602442 | MS.gene35043:intron | 55.0% | |
| GTCGCGCCTCCTGATAAGTT+TGG | - | chr4.4:20600061-20600080 | MS.gene35043:intron | 55.0% | |
| GTTACTGCTGGTGGCATGCA+AGG | - | chr4.4:20598775-20598794 | MS.gene35043:CDS | 55.0% | |
| GTTGTGGGCCACCAAACAGA+CGG | - | chr4.4:20597605-20597624 | MS.gene35043:intron | 55.0% | |
| TAAGTTGCCTGCACGCCTTC+GGG | - | chr4.4:20603350-20603369 | MS.gene35043:CDS | 55.0% | |
| TTCCAGTTCAACCACGTCGG+TGG | - | chr4.4:20597659-20597678 | MS.gene35043:CDS | 55.0% | |
| TTGTGGGCCACCAAACAGAC+GGG | - | chr4.4:20597606-20597625 | MS.gene35043:intron | 55.0% | |
| ! | GCTGCTTTGCTGCAGATGCA+TGG | - | chr4.4:20601933-20601952 | MS.gene35043:intron | 55.0% |
| ! | TCGGTGCCTTCTGGAAGAGT+TGG | - | chr4.4:20598466-20598485 | MS.gene35043:intron | 55.0% |
| !! | ATGAAGAGTAATGGGCCGGC+GGG | + | chr4.4:20597696-20597715 | None:intergenic | 55.0% |
| !! | GGTGCATTTGTTGGTGCCGA+TGG | - | chr4.4:20600266-20600285 | MS.gene35043:CDS | 55.0% |
| AAGCTCAGTCACGTGGCCTC+TGG | - | chr4.4:20602323-20602342 | MS.gene35043:intron | 60.0% | |
| AGGCGCTCTTCCCGTCTGTT+TGG | + | chr4.4:20597619-20597638 | None:intergenic | 60.0% | |
| CACCACCGACGTGGTTGAAC+TGG | + | chr4.4:20597664-20597683 | None:intergenic | 60.0% | |
| CACGCCTGAGGAACACCTGA+TGG | + | chr4.4:20601646-20601665 | None:intergenic | 60.0% | |
| CAGTTCAACCACGTCGGTGG+TGG | - | chr4.4:20597662-20597681 | MS.gene35043:CDS | 60.0% | |
| CGCTCTTCCCGTCTGTTTGG+TGG | + | chr4.4:20597616-20597635 | None:intergenic | 60.0% | |
| GAAGGAGTAGCCCAGTGGCA+TGG | + | chr4.4:20598976-20598995 | None:intergenic | 60.0% | |
| GGTGCAGGAGCAACTAGTCC+TGG | + | chr4.4:20598145-20598164 | None:intergenic | 60.0% | |
| GTGGCCATCAGGTGTTCCTC+AGG | - | chr4.4:20601639-20601658 | MS.gene35043:intron | 60.0% | |
| GTGTAGACGCAGGTGGCGAA+AGG | + | chr4.4:20598408-20598427 | None:intergenic | 60.0% | |
| ! | TTGGTGGCCCACAACCAGCA+CGG | + | chr4.4:20597600-20597619 | None:intergenic | 60.0% |
| !! | AGGAGCATCGGAGCGTGACA+AGG | - | chr4.4:20599512-20599531 | MS.gene35043:intron | 60.0% |
| !! | CGGGAAGAGCGCCTTAGTTG+AGG | - | chr4.4:20597625-20597644 | MS.gene35043:intron | 60.0% |
| !! | GGACTAGTTGCTCCTGCACC+AGG | - | chr4.4:20598145-20598164 | MS.gene35043:intron | 60.0% |
| !!! | AGTAATGGGCCGGCGGGTTT+TGG | + | chr4.4:20597690-20597709 | None:intergenic | 60.0% |
| !!! | TTTTGGTGCCACCACCGACG+TGG | + | chr4.4:20597673-20597692 | None:intergenic | 60.0% |
| AGGCAGAGGCAACACGCCTG+AGG | + | chr4.4:20601658-20601677 | None:intergenic | 65.0% | |
| CATACAGGCACAGGCACGGG+CGG | - | chr4.4:20598183-20598202 | MS.gene35043:intron | 65.0% | |
| GGCCATACAGGCACAGGCAC+GGG | - | chr4.4:20598180-20598199 | MS.gene35043:intron | 65.0% | |
| GGGCCATACAGGCACAGGCA+CGG | - | chr4.4:20598179-20598198 | MS.gene35043:intron | 65.0% | |
| GTGGTGGCACCAAAACCCGC+CGG | - | chr4.4:20597678-20597697 | MS.gene35043:CDS | 65.0% | |
| TCACACGCCTTTCGACGCGC+CGG | - | chr4.4:20597574-20597593 | MS.gene35043:intron | 65.0% | |
| CGCCCGTGCCTGTGCCTGTA+TGG | + | chr4.4:20598185-20598204 | None:intergenic | 70.0% | |
| GTTGCCTGCACGCCTTCGGG+AGG | - | chr4.4:20603353-20603372 | MS.gene35043:CDS | 70.0% | |
| TGGCCCACAACCAGCACGGC+CGG | + | chr4.4:20597596-20597615 | None:intergenic | 70.0% | |
| ! | AGGTCCTCCCGAAGGCGTGC+AGG | + | chr4.4:20603360-20603379 | None:intergenic | 70.0% |
| AGCACGGCCGGCGCGTCGAA+AGG | + | chr4.4:20597584-20597603 | None:intergenic | 75.0% | |
| ! | TTTCGACGCGCCGGCCGTGC+TGG | - | chr4.4:20597583-20597602 | MS.gene35043:intron | 75.0% |
| !! | GCGCCGGCCGTGCTGGTTGT+GGG | - | chr4.4:20597590-20597609 | MS.gene35043:intron | 75.0% |
| !!! | CGCGCCGGCCGTGCTGGTTG+TGG | - | chr4.4:20597589-20597608 | MS.gene35043:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20597467 | 20603651 | 20597467 | ID=MS.gene35043 |
| chr4.4 | mRNA | 20597467 | 20603651 | 20597467 | ID=MS.gene35043.t1;Parent=MS.gene35043 |
| chr4.4 | exon | 20603307 | 20603651 | 20603307 | ID=MS.gene35043.t1.exon1;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20603307 | 20603651 | 20603307 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20602584 | 20603096 | 20602584 | ID=MS.gene35043.t1.exon2;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20602584 | 20603096 | 20602584 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20601755 | 20601888 | 20601755 | ID=MS.gene35043.t1.exon3;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20601755 | 20601888 | 20601755 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20601555 | 20601647 | 20601555 | ID=MS.gene35043.t1.exon4;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20601555 | 20601647 | 20601555 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20601349 | 20601412 | 20601349 | ID=MS.gene35043.t1.exon5;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20601349 | 20601412 | 20601349 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20601036 | 20601084 | 20601036 | ID=MS.gene35043.t1.exon6;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20601036 | 20601084 | 20601036 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20600802 | 20600884 | 20600802 | ID=MS.gene35043.t1.exon7;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20600802 | 20600884 | 20600802 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20600381 | 20600538 | 20600381 | ID=MS.gene35043.t1.exon8;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20600381 | 20600538 | 20600381 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20600233 | 20600293 | 20600233 | ID=MS.gene35043.t1.exon9;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20600233 | 20600293 | 20600233 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20599901 | 20599963 | 20599901 | ID=MS.gene35043.t1.exon10;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20599901 | 20599963 | 20599901 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20599398 | 20599498 | 20599398 | ID=MS.gene35043.t1.exon11;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20599398 | 20599498 | 20599398 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20599113 | 20599170 | 20599113 | ID=MS.gene35043.t1.exon12;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20599113 | 20599170 | 20599113 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20598601 | 20598933 | 20598601 | ID=MS.gene35043.t1.exon13;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20598601 | 20598933 | 20598601 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20597636 | 20597800 | 20597636 | ID=MS.gene35043.t1.exon14;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20597636 | 20597800 | 20597636 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| chr4.4 | exon | 20597467 | 20597532 | 20597467 | ID=MS.gene35043.t1.exon15;Parent=MS.gene35043.t1 |
| chr4.4 | CDS | 20597467 | 20597532 | 20597467 | ID=cds.MS.gene35043.t1;Parent=MS.gene35043.t1 |
| Gene Sequence |
| Protein sequence |
