AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051508

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051508.t1 MTR_1g014640 99.320 294 2 0 1 294 44 337 0.0 602
MS.gene051508.t1 MTR_1g013400 99.320 294 2 0 1 294 44 337 0.0 602
MS.gene051508.t1 MTR_3g105730 92.491 293 21 1 1 293 1 292 0.0 556
MS.gene051508.t1 MTR_3g105730 93.258 267 17 1 27 293 5 270 0.0 514
MS.gene051508.t1 MTR_1g115570 65.918 267 82 3 19 280 75 337 2.88e-128 369
MS.gene051508.t1 MTR_3g105730 91.935 186 15 0 1 186 1 186 1.00e-124 355
MS.gene051508.t1 MTR_3g091060 60.741 270 102 1 15 280 71 340 2.61e-116 339
MS.gene051508.t1 MTR_4g094208 47.328 262 131 5 23 280 18 276 3.47e-70 219
MS.gene051508.t1 MTR_2g008850 45.802 262 135 5 23 280 22 280 1.59e-69 217
MS.gene051508.t1 MTR_2g008850 47.679 237 118 4 47 280 1 234 2.82e-67 209
MS.gene051508.t1 MTR_5g063940 43.893 262 140 5 23 280 23 281 4.06e-67 211
MS.gene051508.t1 MTR_3g074610 42.254 284 157 5 1 280 1 281 4.52e-67 211
MS.gene051508.t1 MTR_8g463130 44.803 279 138 7 7 280 14 281 7.45e-67 210
MS.gene051508.t1 MTR_2g078760 42.000 300 149 8 3 280 36 332 1.23e-66 211
MS.gene051508.t1 MTR_8g463130 45.817 251 129 5 34 280 6 253 1.75e-65 206
MS.gene051508.t1 MTR_2g078760 44.444 252 133 5 33 280 5 253 7.87e-65 204
MS.gene051508.t1 MTR_5g063940 45.992 237 122 4 47 280 1 234 7.93e-65 203
MS.gene051508.t1 MTR_4g094542 42.857 252 136 5 33 280 117 364 2.74e-60 196
MS.gene051508.t1 MTR_3g464650 40.141 284 147 6 8 280 43 314 6.83e-60 193
MS.gene051508.t1 MTR_3g464700 46.698 212 106 3 42 250 95 302 1.00e-57 188
MS.gene051508.t1 MTR_5g071550 40.784 255 138 4 35 280 124 374 1.72e-56 186
MS.gene051508.t1 MTR_5g071550 43.056 216 116 3 35 247 124 335 1.20e-50 171
MS.gene051508.t1 MTR_2g078760 40.078 257 129 8 3 237 36 289 4.12e-50 167
MS.gene051508.t1 MTR_1g050520 40.698 258 140 6 33 278 386 642 4.57e-49 172
MS.gene051508.t1 MTR_1g015110 35.762 302 136 7 35 278 240 541 2.99e-47 166
MS.gene051508.t1 MTR_2g040500 33.524 349 156 9 10 285 195 540 5.29e-46 162
MS.gene051508.t1 MTR_5g024340 38.023 263 141 7 36 280 87 345 6.26e-46 159
MS.gene051508.t1 MTR_5g080680 39.912 228 123 3 35 248 102 329 1.84e-44 155
MS.gene051508.t1 MTR_4g125810 39.526 253 110 6 65 278 253 501 2.52e-44 157
MS.gene051508.t1 MTR_3g068200 33.974 312 169 5 19 293 77 388 2.92e-44 155
MS.gene051508.t1 MTR_1g086350 34.420 276 147 8 42 288 71 341 1.21e-43 153
MS.gene051508.t1 MTR_1g086350 34.420 276 147 8 42 288 87 357 1.34e-43 153
MS.gene051508.t1 MTR_4g116420 35.581 267 147 5 36 280 87 350 5.02e-43 151
MS.gene051508.t1 MTR_1g086350 34.677 248 138 6 61 288 12 255 5.39e-43 149
MS.gene051508.t1 MTR_3g104710 34.528 307 138 7 35 278 231 537 2.46e-42 153
MS.gene051508.t1 MTR_5g009370 36.140 285 144 9 34 283 52 333 4.85e-42 147
MS.gene051508.t1 MTR_1g028300 38.686 274 141 6 29 278 107 377 3.49e-41 147
MS.gene051508.t1 MTR_4g123080 35.745 235 127 5 64 278 94 324 5.91e-41 145
MS.gene051508.t1 MTR_4g123080 35.745 235 127 5 64 278 112 342 6.71e-41 146
MS.gene051508.t1 MTR_3g107880 36.296 270 147 8 32 280 22 287 6.77e-41 144
MS.gene051508.t1 MTR_8g102550 34.589 292 145 9 30 278 98 386 7.69e-41 146
MS.gene051508.t1 MTR_3g107880 36.296 270 147 8 32 280 79 344 2.06e-40 144
MS.gene051508.t1 MTR_3g107880 36.296 270 147 8 32 280 80 345 2.29e-40 144
MS.gene051508.t1 MTR_6g081850 34.783 276 148 8 38 283 48 321 7.73e-39 139
MS.gene051508.t1 MTR_2g033000 32.746 284 141 9 32 278 59 329 7.92e-39 140
MS.gene051508.t1 MTR_1g014190 30.818 318 148 12 29 280 18 329 1.02e-35 132
MS.gene051508.t1 MTR_1g014190 30.818 318 148 12 29 280 56 367 1.24e-35 132
MS.gene051508.t1 MTR_4g007440 28.527 319 153 9 29 280 18 328 4.61e-34 127
MS.gene051508.t1 MTR_3g105880 29.538 325 159 10 29 288 18 337 9.88e-34 126
MS.gene051508.t1 MTR_3g105880 31.636 275 127 9 29 247 18 287 8.93e-33 123
MS.gene051508.t1 MTR_2g078760 37.500 200 102 7 3 182 36 232 7.19e-32 119
MS.gene051508.t1 MTR_4g094208 42.593 162 88 4 23 182 18 176 8.93e-32 117
MS.gene051508.t1 MTR_5g080680 37.912 182 99 3 35 202 102 283 1.09e-28 111
MS.gene051508.t1 MTR_3g491830 27.508 309 168 8 17 277 46 346 1.88e-28 112
MS.gene051508.t1 MTR_4g118340 30.970 268 142 9 63 288 84 350 2.05e-28 112
MS.gene051508.t1 MTR_1g110210 32.157 255 144 10 48 278 46 295 3.84e-28 110
MS.gene051508.t1 MTR_1g075730 29.333 225 142 4 56 280 70 277 5.10e-28 109
MS.gene051508.t1 MTR_1g075730 28.889 225 139 3 56 280 70 273 5.49e-28 109
MS.gene051508.t1 MTR_7g112430 32.016 253 144 8 54 285 57 302 3.27e-27 110
MS.gene051508.t1 MTR_2g020970 29.545 308 170 11 27 294 55 355 1.18e-26 108
MS.gene051508.t1 MTR_2g020970 29.932 294 159 11 27 280 55 341 1.85e-26 107
MS.gene051508.t1 MTR_1g019760 33.475 236 133 9 65 281 65 295 1.88e-26 107
MS.gene051508.t1 MTR_1g019760 32.917 240 137 9 65 285 65 299 2.85e-26 107
MS.gene051508.t1 MTR_4g013295 31.071 280 144 10 60 290 72 351 3.53e-26 106
MS.gene051508.t1 MTR_5g071550 39.333 150 85 2 35 182 124 269 7.06e-26 103
MS.gene051508.t1 MTR_7g090530 31.873 251 130 8 65 275 69 318 1.10e-25 105
MS.gene051508.t1 MTR_7g070510 29.123 285 145 7 65 293 92 375 1.54e-25 105
MS.gene051508.t1 MTR_3g101540 30.738 244 145 8 65 289 66 304 1.94e-25 105
MS.gene051508.t1 MTR_3g101540 30.738 244 145 8 65 289 66 304 2.24e-25 105
MS.gene051508.t1 MTR_7g112490 30.488 246 123 7 67 264 93 338 3.81e-25 103
MS.gene051508.t1 MTR_7g112490 30.488 246 123 7 67 264 111 356 4.37e-25 103
MS.gene051508.t1 MTR_7g029240 33.206 262 149 12 54 293 57 314 5.33e-25 103
MS.gene051508.t1 MTR_1g083750 29.930 284 158 11 29 281 25 298 1.20e-24 102
MS.gene051508.t1 MTR_2g435550 30.075 266 140 8 61 280 88 353 1.55e-24 101
MS.gene051508.t1 MTR_1g083690 32.510 243 117 11 67 266 91 329 1.63e-24 101
MS.gene051508.t1 MTR_2g435550 30.075 266 140 8 61 280 74 339 1.64e-24 101
MS.gene051508.t1 MTR_2g435550 31.276 243 128 7 61 264 88 330 2.46e-24 101
MS.gene051508.t1 MTR_1g116260 30.034 293 139 10 55 284 69 358 3.01e-24 101
MS.gene051508.t1 MTR_7g100240 30.522 249 124 7 45 247 47 292 3.81e-24 100
MS.gene051508.t1 MTR_4g120410 35.556 180 91 7 125 280 174 352 5.70e-24 100
MS.gene051508.t1 MTR_6g087000 29.730 259 138 9 65 280 124 381 6.23e-24 102
MS.gene051508.t1 MTR_1g016620 33.036 224 110 6 67 251 70 292 7.33e-24 99.8
MS.gene051508.t1 MTR_1g041475 28.972 214 131 3 67 280 81 273 8.41e-24 98.2
MS.gene051508.t1 MTR_6g087000 29.730 259 138 9 65 280 124 381 1.02e-23 101
MS.gene051508.t1 MTR_1g067210 29.520 271 141 8 45 269 52 318 2.77e-23 98.6
MS.gene051508.t1 MTR_8g074930 30.000 290 137 10 67 294 81 366 5.25e-23 97.8
MS.gene051508.t1 MTR_7g090550 31.154 260 128 10 31 248 42 292 6.50e-23 98.2
MS.gene051508.t1 MTR_5g005810 30.877 285 149 12 33 280 298 571 8.70e-23 98.6
MS.gene051508.t1 MTR_3g032660 29.771 262 135 10 45 264 51 305 3.54e-22 95.9
MS.gene051508.t1 MTR_3g032700 29.389 262 136 10 45 264 51 305 6.47e-22 95.1
MS.gene051508.t1 MTR_1g106855 29.617 287 133 9 67 289 63 344 1.72e-21 93.6
MS.gene051508.t1 MTR_2g033910 30.800 250 132 7 60 269 70 318 4.71e-21 92.0
MS.gene051508.t1 MTR_1g071370 28.692 237 111 6 100 278 200 436 1.01e-20 92.8
MS.gene051508.t1 MTR_1g106855 31.111 225 108 7 67 247 63 284 8.49e-20 87.8
MS.gene051508.t1 MTR_1g112840 29.018 224 114 7 67 248 83 303 8.95e-20 89.0
MS.gene051508.t1 MTR_4g037470 30.677 251 120 7 67 264 107 356 1.66e-19 88.6
MS.gene051508.t1 MTR_4g037470 30.677 251 120 7 67 264 98 347 2.06e-19 88.2
MS.gene051508.t1 MTR_2g090190 30.249 281 134 10 67 288 92 369 2.69e-19 87.8
MS.gene051508.t1 MTR_7g081020 27.530 247 133 7 65 269 76 318 5.01e-19 86.7
MS.gene051508.t1 MTR_7g060770 30.088 226 114 5 67 248 265 490 1.63e-18 85.9
MS.gene051508.t1 MTR_0015s0140 28.309 272 137 9 65 278 79 350 4.75e-18 84.0
MS.gene051508.t1 MTR_4g113480 27.481 262 151 9 47 274 60 316 5.20e-18 84.3
MS.gene051508.t1 MTR_1g083750 30.476 210 117 7 90 281 8 206 5.78e-18 83.2
MS.gene051508.t1 MTR_7g081020 27.679 224 117 6 67 248 78 298 6.17e-18 82.8
MS.gene051508.t1 MTR_8g017240 31.250 240 129 10 61 266 82 319 1.56e-17 82.0
MS.gene051508.t1 MTR_7g021530 29.435 248 140 9 39 264 59 293 1.87e-17 82.0
MS.gene051508.t1 MTR_7g021530 29.435 248 140 9 39 264 109 343 3.15e-17 81.6
MS.gene051508.t1 MTR_7g021530 29.435 248 140 9 39 264 150 384 3.75e-17 81.6
MS.gene051508.t1 MTR_7g080170 29.577 213 127 6 93 283 174 385 5.38e-17 81.3
MS.gene051508.t1 MTR_7g080170 29.577 213 127 6 93 283 66 277 9.01e-17 80.1
MS.gene051508.t1 MTR_4g123080 35.659 129 70 3 160 278 104 229 1.57e-16 78.2
MS.gene051508.t1 MTR_4g076560 28.685 251 127 9 67 269 204 450 3.06e-16 79.0
MS.gene051508.t1 MTR_8g074930 29.482 251 118 8 102 294 5 254 4.27e-16 77.0
MS.gene051508.t1 MTR_3g032590 30.994 171 86 4 125 264 142 311 2.67e-13 70.1
MS.gene051508.t1 MTR_5g005810 30.808 198 103 9 33 207 298 484 1.95e-12 67.8
MS.gene051508.t1 MTR_4g119830 32.484 157 70 5 126 248 277 431 1.61e-11 64.7
MS.gene051508.t1 MTR_7g021530 27.803 223 128 8 39 239 109 320 4.52e-11 62.8
MS.gene051508.t1 MTR_7g021530 27.803 223 128 8 39 239 150 361 6.77e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051508.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene051508.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene051508.t1 AT4G31750 90.476 294 24 2 1 291 1 293 0.0 535
MS.gene051508.t1 AT5G24940 83.630 281 45 1 1 281 1 280 7.35e-177 496
MS.gene051508.t1 AT5G10740 82.562 281 48 1 1 281 1 280 5.58e-173 483
MS.gene051508.t1 AT5G10740 82.562 281 48 1 1 281 1 280 5.58e-173 483
MS.gene051508.t1 AT1G43900 63.878 263 89 2 23 280 107 368 5.41e-125 362
MS.gene051508.t1 AT5G53140 58.687 259 107 0 22 280 89 347 1.43e-114 337
MS.gene051508.t1 AT5G53140 58.687 259 107 0 22 280 89 347 1.43e-114 337
MS.gene051508.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene051508.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene051508.t1 AT1G78200 45.420 262 139 3 23 280 21 282 1.95e-71 222
MS.gene051508.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene051508.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene051508.t1 AT1G34750 44.656 262 138 5 23 280 23 281 9.10e-69 215
MS.gene051508.t1 AT1G78200 46.414 237 124 2 47 280 1 237 4.75e-68 212
MS.gene051508.t1 AT1G78200 46.414 237 124 2 47 280 1 237 4.75e-68 212
MS.gene051508.t1 AT2G20630 45.635 252 130 5 33 280 30 278 2.28e-67 211
MS.gene051508.t1 AT4G28400 43.774 265 141 6 21 280 21 282 7.63e-66 207
MS.gene051508.t1 AT4G28400 44.048 252 134 5 33 280 12 260 1.14e-65 206
MS.gene051508.t1 AT2G20630 45.059 253 132 5 33 281 30 279 1.60e-65 207
MS.gene051508.t1 AT1G22280 44.488 254 134 5 31 280 30 280 1.36e-64 204
MS.gene051508.t1 AT3G15260 45.627 263 135 6 23 280 29 288 1.17e-63 202
MS.gene051508.t1 AT3G15260 45.627 263 135 6 23 280 29 288 1.17e-63 202
MS.gene051508.t1 AT1G22280 43.846 260 133 6 31 280 30 286 7.90e-63 200
MS.gene051508.t1 AT2G34740 43.922 255 134 6 32 281 85 335 5.94e-60 194
MS.gene051508.t1 AT2G40180 40.996 261 135 7 35 280 129 385 8.04e-57 187
MS.gene051508.t1 AT1G07160 41.473 258 135 6 35 280 123 376 1.61e-56 187
MS.gene051508.t1 AT2G30020 40.945 254 137 4 35 278 140 390 1.24e-55 185
MS.gene051508.t1 AT1G34750 44.749 219 114 5 23 237 23 238 2.55e-53 174
MS.gene051508.t1 AT1G67820 42.982 228 117 4 29 247 74 297 7.32e-53 178
MS.gene051508.t1 AT1G67820 42.982 228 117 4 29 247 110 333 2.17e-52 177
MS.gene051508.t1 AT3G51470 40.230 261 139 7 33 280 27 283 1.38e-49 167
MS.gene051508.t1 AT3G51470 40.230 261 139 7 33 280 71 327 3.05e-49 167
MS.gene051508.t1 AT2G40860 40.230 261 136 7 33 278 293 548 1.98e-48 169
MS.gene051508.t1 AT2G40860 40.230 261 136 7 33 278 391 646 3.34e-48 170
MS.gene051508.t1 AT4G28400 41.892 222 121 6 21 237 21 239 8.80e-48 160
MS.gene051508.t1 AT5G57050 38.796 299 126 11 35 278 73 369 3.86e-47 162
MS.gene051508.t1 AT5G57050 38.796 299 126 11 35 278 113 409 3.88e-47 163
MS.gene051508.t1 AT4G26080 38.176 296 127 10 35 278 129 420 1.57e-46 162
MS.gene051508.t1 AT3G62260 35.766 274 143 7 42 286 85 354 5.21e-46 159
MS.gene051508.t1 AT3G62260 35.766 274 143 7 42 286 86 355 5.21e-46 159
MS.gene051508.t1 AT3G62260 36.059 269 139 7 47 286 1 265 1.56e-45 155
MS.gene051508.t1 AT2G33700 39.648 227 123 5 64 280 122 344 1.91e-45 158
MS.gene051508.t1 AT5G59220 40.086 232 121 3 35 248 112 343 1.34e-44 156
MS.gene051508.t1 AT2G34740 41.395 215 117 6 32 241 81 291 1.56e-44 153
MS.gene051508.t1 AT2G34740 41.395 215 117 6 32 241 99 309 1.59e-44 154
MS.gene051508.t1 AT1G07430 40.084 237 117 6 35 248 121 355 2.90e-44 156
MS.gene051508.t1 AT2G25620 36.782 261 138 5 42 278 97 354 4.15e-43 152
MS.gene051508.t1 AT2G25620 36.782 261 138 5 42 278 97 354 4.15e-43 152
MS.gene051508.t1 AT2G40860 38.800 250 133 7 33 267 391 635 9.46e-43 155
MS.gene051508.t1 AT2G29380 37.324 284 135 8 35 278 78 358 1.04e-42 150
MS.gene051508.t1 AT5G51760 32.132 333 168 5 10 285 55 386 2.53e-41 147
MS.gene051508.t1 AT5G51760 32.132 333 168 5 10 285 85 416 4.35e-41 147
MS.gene051508.t1 AT3G17250 35.950 242 127 6 63 280 156 393 6.84e-41 147
MS.gene051508.t1 AT1G17550 34.295 312 136 8 35 278 189 499 9.16e-41 148
MS.gene051508.t1 AT1G17550 34.295 312 136 8 35 278 189 499 9.16e-41 148
MS.gene051508.t1 AT3G11410 36.975 238 125 3 36 248 106 343 5.72e-40 144
MS.gene051508.t1 AT1G48040 38.618 246 111 6 64 280 115 349 6.96e-40 143
MS.gene051508.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene051508.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene051508.t1 AT1G72770 33.762 311 138 8 35 278 190 499 4.70e-39 143
MS.gene051508.t1 AT1G18030 32.967 273 151 9 38 280 78 348 1.93e-34 128
MS.gene051508.t1 AT2G25070 29.394 330 163 10 29 293 18 342 6.78e-32 121
MS.gene051508.t1 AT2G25070 29.394 330 163 10 29 293 18 342 6.78e-32 121
MS.gene051508.t1 AT4G31860 29.338 317 154 9 29 280 18 329 1.48e-31 120
MS.gene051508.t1 AT2G40860 38.095 210 111 6 33 228 391 595 3.75e-31 122
MS.gene051508.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene051508.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene051508.t1 AT3G16800 34.599 237 122 6 61 264 89 325 5.20e-31 119
MS.gene051508.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.72e-30 115
MS.gene051508.t1 AT3G16800 34.783 230 117 6 68 264 1 230 1.72e-30 115
MS.gene051508.t1 AT4G08260 33.937 221 108 5 64 278 18 206 5.93e-30 113
MS.gene051508.t1 AT4G31860 30.909 275 129 8 29 247 18 287 1.14e-29 114
MS.gene051508.t1 AT1G22280 41.558 154 85 4 31 182 30 180 1.22e-29 111
MS.gene051508.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene051508.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene051508.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene051508.t1 AT1G68410 34.043 235 127 8 65 278 73 300 1.69e-29 116
MS.gene051508.t1 AT1G18030 34.222 225 121 7 38 237 78 300 2.82e-29 113
MS.gene051508.t1 AT4G27800 29.126 309 163 9 17 277 45 345 1.17e-28 113
MS.gene051508.t1 AT5G57050 39.196 199 90 9 35 204 113 309 2.20e-28 111
MS.gene051508.t1 AT1G09160 32.245 245 140 9 54 278 57 295 4.86e-28 112
MS.gene051508.t1 AT1G09160 32.245 245 140 9 54 278 57 295 4.86e-28 112
MS.gene051508.t1 AT4G32950 38.140 215 107 9 65 256 72 283 1.09e-27 109
MS.gene051508.t1 AT5G59220 37.297 185 98 3 35 201 112 296 1.30e-27 108
MS.gene051508.t1 AT1G47380 31.557 244 143 8 65 289 64 302 3.19e-27 110
MS.gene051508.t1 AT5G02760 31.579 266 132 9 26 247 32 291 3.41e-27 109
MS.gene051508.t1 AT4G31860 31.179 263 120 8 29 235 18 275 5.51e-27 106
MS.gene051508.t1 AT4G27800 29.710 276 142 8 17 248 45 312 1.70e-26 106
MS.gene051508.t1 AT4G27800 29.710 276 142 8 17 248 45 312 1.79e-26 106
MS.gene051508.t1 AT5G27930 31.034 261 132 8 67 280 94 353 1.79e-25 104
MS.gene051508.t1 AT5G27930 31.034 261 132 8 67 280 94 353 1.79e-25 104
MS.gene051508.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene051508.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene051508.t1 AT3G05640 32.941 255 130 11 67 280 95 349 5.13e-25 103
MS.gene051508.t1 AT2G20050 31.518 257 133 10 65 280 143 397 5.82e-25 105
MS.gene051508.t1 AT2G20050 31.518 257 133 10 65 280 143 397 6.40e-25 105
MS.gene051508.t1 AT3G63320 27.273 319 134 8 62 283 66 383 1.27e-24 102
MS.gene051508.t1 AT3G23360 29.699 266 141 7 20 280 35 259 1.80e-24 99.8
MS.gene051508.t1 AT3G06270 28.231 294 164 11 27 280 56 342 1.82e-24 101
MS.gene051508.t1 AT5G19280 30.851 282 154 11 33 280 303 577 2.64e-24 102
MS.gene051508.t1 AT3G17090 33.058 242 122 7 67 269 86 326 6.89e-24 100
MS.gene051508.t1 AT3G51370 28.720 289 138 9 65 290 79 362 8.29e-24 100
MS.gene051508.t1 AT3G51370 28.720 289 138 9 65 290 79 362 8.29e-24 100
MS.gene051508.t1 AT5G26010 35.681 213 105 8 65 247 73 283 1.40e-23 98.6
MS.gene051508.t1 AT3G17090 33.182 220 108 6 67 247 86 305 7.36e-23 96.3
MS.gene051508.t1 AT3G12620 29.537 281 133 9 60 278 78 355 8.34e-23 97.4
MS.gene051508.t1 AT3G12620 29.537 281 133 9 60 278 78 355 8.34e-23 97.4
MS.gene051508.t1 AT3G27140 30.268 261 115 5 47 292 1 209 2.53e-22 93.6
MS.gene051508.t1 AT3G63340 28.692 237 111 7 100 278 207 443 2.97e-22 96.7
MS.gene051508.t1 AT5G01700 32.210 267 127 11 67 285 31 291 3.34e-22 95.1
MS.gene051508.t1 AT3G55050 29.787 282 133 10 65 284 84 362 3.43e-22 95.5
MS.gene051508.t1 AT3G55050 29.787 282 133 10 65 284 84 362 3.43e-22 95.5
MS.gene051508.t1 AT3G63340 28.692 237 111 7 100 278 207 443 4.24e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.36e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.36e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.75e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 4.93e-22 96.7
MS.gene051508.t1 AT3G63340 28.512 242 115 7 100 283 207 448 5.18e-22 96.7
MS.gene051508.t1 AT5G19280 30.137 292 153 13 33 280 303 587 5.84e-22 96.3
MS.gene051508.t1 AT5G01700 32.210 267 131 10 65 285 78 340 7.13e-22 94.7
MS.gene051508.t1 AT3G63320 29.832 238 107 7 100 278 59 295 1.67e-21 93.6
MS.gene051508.t1 AT4G32950 37.306 193 97 8 65 234 72 263 2.59e-21 91.7
MS.gene051508.t1 AT1G72770 33.333 213 95 6 35 201 190 401 3.26e-21 93.2
MS.gene051508.t1 AT1G72770 33.333 213 95 6 35 201 190 401 3.26e-21 93.2
MS.gene051508.t1 AT4G38520 26.389 360 181 12 1 283 6 358 6.28e-21 92.0
MS.gene051508.t1 AT4G38520 26.389 360 181 12 1 283 6 358 6.28e-21 92.0
MS.gene051508.t1 AT5G06750 28.689 244 123 7 67 264 84 322 1.02e-20 91.7
MS.gene051508.t1 AT5G06750 28.689 244 123 7 67 264 84 322 1.02e-20 91.7
MS.gene051508.t1 AT4G33920 29.514 288 134 12 67 289 63 346 1.38e-20 90.9
MS.gene051508.t1 AT5G66080 30.204 245 125 7 67 269 84 324 1.45e-20 90.9
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 189 401 2.25e-19 88.2
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 119 331 2.25e-19 88.2
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 119 331 2.25e-19 88.2
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 185 397 2.45e-19 88.2
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene051508.t1 AT1G79630 31.308 214 124 5 93 284 79 291 4.58e-19 86.7
MS.gene051508.t1 AT1G03590 32.627 236 107 9 63 247 88 322 4.93e-19 87.0
MS.gene051508.t1 AT1G16220 28.421 285 138 9 65 284 95 378 2.10e-18 85.5
MS.gene051508.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene051508.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene051508.t1 AT4G03415 32.365 241 108 10 61 247 93 332 7.76e-18 83.6
MS.gene051508.t1 AT5G36250 27.826 230 132 8 79 285 169 387 9.68e-18 83.2
MS.gene051508.t1 AT3G02750 32.203 177 102 4 88 247 178 353 1.81e-17 82.8
MS.gene051508.t1 AT3G02750 32.203 177 102 4 88 247 178 353 1.81e-17 82.8
MS.gene051508.t1 AT2G05050 43.299 97 49 1 188 278 91 187 2.49e-17 79.0
MS.gene051508.t1 AT3G51370 28.629 248 116 7 102 290 32 277 4.10e-17 80.1
MS.gene051508.t1 AT3G63340 32.394 142 81 4 157 283 340 481 2.89e-15 76.6
MS.gene051508.t1 AT3G16560 26.966 267 121 11 52 247 160 423 5.71e-13 69.3
MS.gene051508.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene051508.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene051508.t1 AT3G16560 26.966 267 121 11 52 247 160 423 6.14e-13 69.3
MS.gene051508.t1 AT3G02750 25.283 265 138 6 88 293 178 441 8.80e-12 65.9
MS.gene051508.t1 AT5G36250 28.814 177 97 7 79 237 169 334 1.28e-11 64.7

Find 74 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAACACACCTGGATTTC+CGG 0.247960 1.3:+7682740 None:intergenic
GGCTGATCAAATTACTAAAT+AGG 0.269326 1.3:+7683679 None:intergenic
TTCTCTTGAGTTTCTTATAC+TGG 0.273284 1.3:-7682581 MS.gene051508:CDS
TGGTGTCAGAAATGAATTTC+GGG 0.277480 1.3:+7683655 None:intergenic
CTACAAACCTATGGCAGATT+TGG 0.295271 1.3:+7683635 None:intergenic
GCTTCTTCTGCATCCTCAAT+TGG 0.302601 1.3:+7681812 None:intergenic
TTTGGTCTGGTTTGTGATCT+CGG 0.324635 1.3:+7682980 None:intergenic
TCCTTTGCCTCTCATCGGTT+TGG 0.352602 1.3:+7682962 None:intergenic
GCTTCCACTGCCATTCTTGT+TGG 0.352895 1.3:-7683438 MS.gene051508:CDS
CTTGCTGTTTCTCGCGCATT+TGG 0.353518 1.3:-7682797 MS.gene051508:CDS
TTGGTGTCAGAAATGAATTT+CGG 0.353974 1.3:+7683654 None:intergenic
ACAAGAATTGACGGCGTTGA+TGG 0.370122 1.3:-7684669 MS.gene051508:CDS
TCCATTGAAGATCTCTTGCC+AGG 0.370550 1.3:+7684705 None:intergenic
GTTTGCTTGTTGCAAATGTT+GGG 0.374361 1.3:-7683410 MS.gene051508:CDS
GCAATACGTTGTTGCTGATC+CGG 0.380454 1.3:-7682759 MS.gene051508:CDS
CTGTTAGTGGTGGAGGGCTC+AGG 0.380832 1.3:-7686311 MS.gene051508:intron
CGTTTGCTTGTTGCAAATGT+TGG 0.389439 1.3:-7683411 MS.gene051508:CDS
TGTTCTGTCACCTTCAAGTC+AGG 0.389562 1.3:-7686355 MS.gene051508:CDS
TGCCTCTCATCGGTTTGGTC+TGG 0.391323 1.3:+7682967 None:intergenic
AAGAACCTTGATTGTTCATC+AGG 0.396468 1.3:+7681717 None:intergenic
CTGAGCCCTCCACCACTAAC+AGG 0.401508 1.3:+7686312 None:intergenic
GCAGCATGAACCTGACTTGA+AGG 0.411927 1.3:+7686345 None:intergenic
AACCATACTTTACAGGAACT+TGG 0.415452 1.3:-7682835 MS.gene051508:intron
GTTATATGCAGGGGTGGAAA+TGG 0.436154 1.3:-7683375 MS.gene051508:intron
ATGCGGGAGGCTTTGTTATG+TGG 0.437386 1.3:-7682933 MS.gene051508:CDS
TTGGTCTGGTTTGTGATCTC+GGG 0.438844 1.3:+7682981 None:intergenic
CAGCAACAACGTATTGCTTA+AGG 0.446853 1.3:+7682765 None:intergenic
CGTTTCCTGATGAACAATCA+AGG 0.448939 1.3:-7681722 MS.gene051508:CDS
TTCTATCCTTTGCCTCTCAT+CGG 0.449419 1.3:+7682957 None:intergenic
AATAATCAAAACAGAGATGC+TGG 0.452585 1.3:-7683468 MS.gene051508:CDS
GGAGGCTTTGTTATGTGGGC+TGG 0.461457 1.3:-7682928 MS.gene051508:intron
TATGGTCTTGCAGGAAGAAA+AGG 0.465734 1.3:-7682611 MS.gene051508:intron
ACCCCTGCATATAACAGCTC+TGG 0.472724 1.3:+7683383 None:intergenic
TATGGATATGCTAGCTCCCC+TGG 0.473211 1.3:-7684723 MS.gene051508:CDS
TGTTGCTGATCCGGAAATCC+AGG 0.488097 1.3:-7682750 MS.gene051508:intron
TGCTATGATTAAACCAATTG+AGG 0.496383 1.3:-7681825 MS.gene051508:CDS
ACTCCAGAGCTGTTATATGC+AGG 0.496874 1.3:-7683386 MS.gene051508:CDS
CCCTGGCAAGAGATCTTCAA+TGG 0.496968 1.3:-7684706 MS.gene051508:CDS
GGCGTTGATGGCGAAGTTGT+TGG 0.502083 1.3:-7684657 MS.gene051508:CDS
CTCCAGAGCTGTTATATGCA+GGG 0.504830 1.3:-7683385 MS.gene051508:CDS
TGGTTTGTGATCTCGGGAAA+CGG 0.510321 1.3:+7682987 None:intergenic
CAAACGGTCACCAACAAGAA+TGG 0.514978 1.3:+7683428 None:intergenic
GCTGATGATACACCTGTTAG+TGG 0.523474 1.3:-7686324 MS.gene051508:CDS
TCTTCGTCTCGTAATAGCTC+TGG 0.524836 1.3:-7681698 MS.gene051508:CDS
TCTGACACCAAATCTGCCAT+AGG 0.533304 1.3:-7683642 MS.gene051508:intron
ATATGTATCTACAGCCAGAA+TGG 0.533971 1.3:-7684756 MS.gene051508:intron
TGCGGGAGGCTTTGTTATGT+GGG 0.548770 1.3:-7682932 MS.gene051508:CDS
CAACATTTGCAACAAGCAAA+CGG 0.552780 1.3:+7683412 None:intergenic
CCATTGAAGATCTCTTGCCA+GGG 0.555774 1.3:+7684706 None:intergenic
GATACACCTGTTAGTGGTGG+AGG 0.559527 1.3:-7686318 MS.gene051508:CDS
GTCACCAACAAGAATGGCAG+TGG 0.571832 1.3:+7683434 None:intergenic
TACTGGCTAGTGACGGACTG+TGG 0.572019 1.3:-7682564 MS.gene051508:CDS
GTGGGATGTTGTCTCAAATG+AGG 0.577758 1.3:-7682545 MS.gene051508:intron
GTGATCTCGGGAAACGGCAA+TGG 0.578024 1.3:+7682993 None:intergenic
CAGAATGGAAAATTCAGCTA+TGG 0.581697 1.3:-7684741 MS.gene051508:CDS
TTTACAGGAACTTGGAGAGT+CGG 0.596161 1.3:-7682827 MS.gene051508:intron
ACCAAACCGATGAGAGGCAA+AGG 0.597114 1.3:-7682963 MS.gene051508:CDS
TTTGCTTGTTGCAAATGTTG+GGG 0.604673 1.3:-7683409 MS.gene051508:CDS
AGGCAAAGGATAGAAGATGC+GGG 0.610771 1.3:-7682949 MS.gene051508:CDS
TCCAGAGCTGTTATATGCAG+GGG 0.611886 1.3:-7683384 MS.gene051508:CDS
AACCAGACCAAACCGATGAG+AGG 0.614896 1.3:-7682969 MS.gene051508:CDS
ACTGGCTAGTGACGGACTGT+GGG 0.617935 1.3:-7682563 MS.gene051508:CDS
GAGGCAAAGGATAGAAGATG+CGG 0.618851 1.3:-7682950 MS.gene051508:CDS
TTTCTTATACTGGCTAGTGA+CGG 0.622894 1.3:-7682571 MS.gene051508:CDS
AGAGCTGTTATATGCAGGGG+TGG 0.625035 1.3:-7683381 MS.gene051508:CDS
CATTGAAGATCTCTTGCCAG+GGG 0.630301 1.3:+7684707 None:intergenic
ATACACCTGTTAGTGGTGGA+GGG 0.634978 1.3:-7686317 MS.gene051508:CDS
TGATTTCAGAAATTCAGAGT+CGG 0.642009 1.3:+7683494 None:intergenic
ACAGGAACTTGGAGAGTCGG+TGG 0.642115 1.3:-7682824 MS.gene051508:intron
ATGCAGAAGAAGCAGCAAAG+AGG 0.661189 1.3:-7681802 MS.gene051508:CDS
GATGATACACCTGTTAGTGG+TGG 0.682529 1.3:-7686321 MS.gene051508:CDS
ATGAAAGAAGCGTATCAGAG+AGG 0.696477 1.3:-7681776 MS.gene051508:CDS
TGTCAGAAATGAATTTCGGG+TGG 0.709462 1.3:+7683658 None:intergenic
CAAAGGATAGAAGATGCGGG+AGG 0.739247 1.3:-7682946 MS.gene051508:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTTAAAAACATAT+TGG + chr1.3:7686017-7686036 None:intergenic 10.0%
!!! TAAATTTTTATTTTGTATGT+GGG - chr1.3:7685878-7685897 MS.gene051508:intron 10.0%
!!! TTAAATTTTTATTTTGTATG+TGG - chr1.3:7685877-7685896 MS.gene051508:intron 10.0%
!! AAAATTAACCTACATATTTA+TGG - chr1.3:7685437-7685456 MS.gene051508:intron 15.0%
!! ATTAAGGAAAGAAAAAATAT+AGG + chr1.3:7683604-7683623 None:intergenic 15.0%
!! TAAAATGTTACAAAGTAAAT+GGG + chr1.3:7685860-7685879 None:intergenic 15.0%
!! TTAAAATGTTACAAAGTAAA+TGG + chr1.3:7685861-7685880 None:intergenic 15.0%
!!! ATTCATTAATAGCAATTTTT+CGG - chr1.3:7683998-7684017 MS.gene051508:intron 15.0%
!!! TAATATTTTACAAAAATGCT+AGG + chr1.3:7685705-7685724 None:intergenic 15.0%
!!! TATTTTTTTTTCTATCTCTA+TGG - chr1.3:7685199-7685218 MS.gene051508:intron 15.0%
!!! TCTAATTTTTATTTTATCCA+TGG - chr1.3:7686061-7686080 MS.gene051508:intron 15.0%
!!! TTATTCTTAGGATTTTAAAT+TGG - chr1.3:7682058-7682077 MS.gene051508:intron 15.0%
!!! TTTATCATTTTTGTTGTTTA+AGG - chr1.3:7681834-7681853 MS.gene051508:CDS 15.0%
!! AAAAAATATCGGAAATAAAC+AGG - chr1.3:7686093-7686112 MS.gene051508:intron 20.0%
!! AAAATGTTACAAAGTAAATG+GGG + chr1.3:7685859-7685878 None:intergenic 20.0%
!! AATAGATATAGTATAGTATC+AGG + chr1.3:7684285-7684304 None:intergenic 20.0%
!! ACTATATCTATTAGAAATGA+AGG - chr1.3:7684293-7684312 MS.gene051508:intron 20.0%
!! ATTAGCGAACAAATTTAAAA+GGG - chr1.3:7685721-7685740 MS.gene051508:intron 20.0%
!! ATTTATCGGAAAAAGAAAAA+GGG + chr1.3:7685583-7685602 None:intergenic 20.0%
!! CTGTGTAAAAAAAATACAAA+TGG + chr1.3:7684534-7684553 None:intergenic 20.0%
!! TATTAGCGAACAAATTTAAA+AGG - chr1.3:7685720-7685739 MS.gene051508:intron 20.0%
!! TATTTATCGGAAAAAGAAAA+AGG + chr1.3:7685584-7685603 None:intergenic 20.0%
!! TTAAAGCCTCTTAAAAAAAA+GGG - chr1.3:7685749-7685768 MS.gene051508:intron 20.0%
!!! AATAATTTTTCATCTCAAAC+CGG + chr1.3:7683109-7683128 None:intergenic 20.0%
!!! AATTGCTATTAATGAATTGA+AGG + chr1.3:7683995-7684014 None:intergenic 20.0%
!!! ATAAAGTATAAATCTGGTTT+TGG - chr1.3:7683800-7683819 MS.gene051508:intron 20.0%
!!! ATTTGATTTTCTAAAACTTG+AGG - chr1.3:7684755-7684774 MS.gene051508:intron 20.0%
!!! ATTTTCCTTTTGAAGTTATT+GGG - chr1.3:7683640-7683659 MS.gene051508:intron 20.0%
!!! GATTTTTGTTTACTATTGTT+TGG - chr1.3:7683140-7683159 MS.gene051508:intron 20.0%
!!! TGATTTGTATCAAGATTATT+TGG - chr1.3:7685641-7685660 MS.gene051508:intron 20.0%
!!! TTTTTATTTTATCCATGGAA+TGG - chr1.3:7686066-7686085 MS.gene051508:intron 20.0%
! AAAAATTAGAGAAGACGTTA+TGG + chr1.3:7686051-7686070 None:intergenic 25.0%
! AAAATTGATATTGCAGTTGT+AGG - chr1.3:7682179-7682198 MS.gene051508:intron 25.0%
! AACAACAATAACAATAACCA+TGG + chr1.3:7682929-7682948 None:intergenic 25.0%
! AATCTACATAAGGAAAGTAA+AGG + chr1.3:7685801-7685820 None:intergenic 25.0%
! ACTTGTGGATGAAATATAAA+AGG - chr1.3:7684887-7684906 MS.gene051508:intron 25.0%
! ACTTTCCTTATGTAGATTAA+AGG - chr1.3:7685803-7685822 MS.gene051508:intron 25.0%
! ATTGAAGAAAACCAGTTTAA+AGG + chr1.3:7684480-7684499 None:intergenic 25.0%
! ATTGTTTGATTAGATTGTCA+AGG - chr1.3:7684926-7684945 MS.gene051508:intron 25.0%
! CAATTACTGTGACAATATAA+AGG + chr1.3:7682700-7682719 None:intergenic 25.0%
! CAATTCATTTATATCTCTTG+TGG + chr1.3:7685623-7685642 None:intergenic 25.0%
! CGAAAATGCACTATATTTAT+CGG + chr1.3:7685597-7685616 None:intergenic 25.0%
! CTTAAAGCCTCTTAAAAAAA+AGG - chr1.3:7685748-7685767 MS.gene051508:intron 25.0%
! CTTTCTTGTTAAAAACTTTC+AGG - chr1.3:7684325-7684344 MS.gene051508:intron 25.0%
! GAAAATTGTCTTGATATTGT+GGG - chr1.3:7682244-7682263 MS.gene051508:intron 25.0%
! GGAATGGAAACAAAAAATAT+CGG - chr1.3:7686082-7686101 MS.gene051508:intron 25.0%
! GTAAAAAAAATACAAATGGC+AGG + chr1.3:7684530-7684549 None:intergenic 25.0%
! TAAAATCCTAAGAATAACCA+TGG + chr1.3:7682055-7682074 None:intergenic 25.0%
! TAAAGCCTCTTAAAAAAAAG+GGG - chr1.3:7685750-7685769 MS.gene051508:intron 25.0%
! TAAAGTCATGATTATTCTCA+AGG - chr1.3:7682539-7682558 MS.gene051508:intron 25.0%
! TAATGTCATTCATTCATACT+TGG - chr1.3:7682952-7682971 MS.gene051508:CDS 25.0%
! TACTTAAAACCATACTTTAC+AGG - chr1.3:7685224-7685243 MS.gene051508:intron 25.0%
! TGAAAAATTATCTTGATGTG+TGG - chr1.3:7682462-7682481 MS.gene051508:intron 25.0%
! TGAAAATTGTCTTGATATTG+TGG - chr1.3:7682243-7682262 MS.gene051508:intron 25.0%
! TGATATTGTGAATGTTATCT+TGG - chr1.3:7682822-7682841 MS.gene051508:CDS 25.0%
! TGTCTCATAAAGTATAAATC+TGG - chr1.3:7683794-7683813 MS.gene051508:intron 25.0%
! TTAAAACCATGGTTATTCTT+AGG - chr1.3:7682046-7682065 MS.gene051508:intron 25.0%
! TTAAAACCTTAAACAAACCA+TGG + chr1.3:7681913-7681932 None:intergenic 25.0%
! TTATATTGTCACAGTAATTG+TGG - chr1.3:7682700-7682719 MS.gene051508:intron 25.0%
!! AAAAAAGTTTGAGTTAGAGT+TGG + chr1.3:7686199-7686218 None:intergenic 25.0%
!! AACTTTTCGATTTCAAGAAT+TGG - chr1.3:7685014-7685033 MS.gene051508:intron 25.0%
!! ACATAGAATGGTTTTTCTTA+AGG - chr1.3:7682153-7682172 MS.gene051508:intron 25.0%
!! ATAATTTTTCATCTCAAACC+GGG + chr1.3:7683108-7683127 None:intergenic 25.0%
!! ATGGTTATTGTTATTGTTGT+TGG - chr1.3:7682928-7682947 MS.gene051508:intron 25.0%
!! ATGTTTTTCTCAATTCTCAA+CGG + chr1.3:7684991-7685010 None:intergenic 25.0%
!! TGTTTTTCTTTATATGGACT+TGG - chr1.3:7684026-7684045 MS.gene051508:intron 25.0%
!! TTTAAAACCATGGTTATTCT+CGG - chr1.3:7682045-7682064 MS.gene051508:intron 25.0%
!! TTTTATGAGACAAGAATTGA+CGG - chr1.3:7683388-7683407 MS.gene051508:CDS 25.0%
!!! AAGGTTTTAAATTGATGTTG+CGG - chr1.3:7681853-7681872 MS.gene051508:intron 25.0%
!!! ACTTTTTTCTACTTTTCTTC+AGG - chr1.3:7686211-7686230 MS.gene051508:intron 25.0%
!!! ATTCATAACTTGGTTTTATG+TGG - chr1.3:7683055-7683074 MS.gene051508:intron 25.0%
!!! ATTTTTATTTTGTATGTGGG+TGG - chr1.3:7685881-7685900 MS.gene051508:intron 25.0%
!!! GATTTTCCTTTTGAAGTTAT+TGG - chr1.3:7683639-7683658 MS.gene051508:intron 25.0%
!!! TATTTTTTGTTTCCATTCCA+TGG + chr1.3:7686081-7686100 None:intergenic 25.0%
!!! TGACTTTTGATTTTTCTGAT+CGG - chr1.3:7683829-7683848 MS.gene051508:intron 25.0%
!!! TTTTGAAGTTATTGGGAAAT+GGG - chr1.3:7683647-7683666 MS.gene051508:CDS 25.0%
AAAAACCTTGGTTATTCTCA+AGG - chr1.3:7682363-7682382 MS.gene051508:intron 30.0%
AAAGGGAAGGAAAAAAACAA+AGG + chr1.3:7685566-7685585 None:intergenic 30.0%
AATAATCAAAACAGAGATGC+TGG - chr1.3:7684598-7684617 MS.gene051508:intron 30.0%
AGAACAGTGTAGTTAAATTG+TGG + chr1.3:7684240-7684259 None:intergenic 30.0%
AGAGATGGAATATCAAAGAA+TGG + chr1.3:7685372-7685391 None:intergenic 30.0%
ATAACAATTGTAGTTGCTGA+CGG - chr1.3:7682335-7682354 MS.gene051508:intron 30.0%
CAACTTAACCACAATACAAA+CGG + chr1.3:7682603-7682622 None:intergenic 30.0%
CAAGAGTCAATACTTCTTAA+AGG + chr1.3:7684073-7684092 None:intergenic 30.0%
CATTTCCCAATAACTTCAAA+AGG + chr1.3:7683648-7683667 None:intergenic 30.0%
CCATTGACAGAAACAAATTA+AGG + chr1.3:7683620-7683639 None:intergenic 30.0%
CCTTAAGTCGGAAAAATTAA+AGG + chr1.3:7683247-7683266 None:intergenic 30.0%
GGCTGATCAAATTACTAAAT+AGG + chr1.3:7684390-7684409 None:intergenic 30.0%
GTTAATGAAAAAGCCAGAAT+TGG + chr1.3:7683217-7683236 None:intergenic 30.0%
TAAAACCTTGAGAATAACCA+AGG + chr1.3:7682371-7682390 None:intergenic 30.0%
TAATCGTTATGGTTGTCAAA+TGG - chr1.3:7684731-7684750 MS.gene051508:CDS 30.0%
TACCATCAAAAACTCCAAAA+AGG + chr1.3:7683435-7683454 None:intergenic 30.0%
TAGAGTTGGATAAGACATTA+GGG + chr1.3:7686185-7686204 None:intergenic 30.0%
TATAGTATAGTATCAGGCAT+AGG + chr1.3:7684279-7684298 None:intergenic 30.0%
TATATGGACTTGGAAAGTAA+TGG - chr1.3:7684036-7684055 MS.gene051508:intron 30.0%
TGAGGAAATCATAATCGTTA+TGG - chr1.3:7684773-7684792 MS.gene051508:intron 30.0%
TGATTTCAGAAATTCAGAGT+CGG + chr1.3:7684575-7684594 None:intergenic 30.0%
TGCTATGATTAAACCAATTG+AGG - chr1.3:7686241-7686260 MS.gene051508:intron 30.0%
TTAAAACCATGGTTATTCTC+GGG - chr1.3:7682737-7682756 MS.gene051508:intron 30.0%
TTAGAGTTGGATAAGACATT+AGG + chr1.3:7686186-7686205 None:intergenic 30.0%
TTCTCTTGAGTTTCTTATAC+TGG - chr1.3:7685485-7685504 MS.gene051508:intron 30.0%
TTGCTCCTTTAATCTACATA+AGG + chr1.3:7685811-7685830 None:intergenic 30.0%
! AACATCTTATTAGCTCTCTA+TGG + chr1.3:7683577-7683596 None:intergenic 30.0%
! ACATCTTATTAGCTCTCTAT+GGG + chr1.3:7683576-7683595 None:intergenic 30.0%
! ATAAGCTAGCTTACATAGAA+TGG - chr1.3:7682141-7682160 MS.gene051508:intron 30.0%
! CAAACGGAAATTTAAAACCA+TGG - chr1.3:7682035-7682054 MS.gene051508:intron 30.0%
! CAACAGAAAGTATAAGACAA+TGG + chr1.3:7683939-7683958 None:intergenic 30.0%
! GTGCGATGTTTTTCTTTATA+TGG - chr1.3:7684020-7684039 MS.gene051508:intron 30.0%
! TCATCTTATTGTTAGCTCTT+GGG - chr1.3:7685166-7685185 MS.gene051508:intron 30.0%
! TCTTTGAGAATAATTTCGAG+AGG - chr1.3:7683908-7683927 MS.gene051508:intron 30.0%
! TGTTAAAAACTTTCAGGTCA+TGG - chr1.3:7684331-7684350 MS.gene051508:intron 30.0%
! TTTAAATTGTTGTTGCCATG+CGG - chr1.3:7682563-7682582 MS.gene051508:CDS 30.0%
! TTTAAATTGTTGTTGCGATG+CGG - chr1.3:7682387-7682406 MS.gene051508:intron 30.0%
!! ACTATTTTTCGTATCACTTG+TGG - chr1.3:7684872-7684891 MS.gene051508:intron 30.0%
!! CCTTAATTTGTTTCTGTCAA+TGG - chr1.3:7683617-7683636 MS.gene051508:intron 30.0%
!! CCTTTAATTTTTCCGACTTA+AGG - chr1.3:7683244-7683263 MS.gene051508:intron 30.0%
!! CTATCCATGCTACTTATTTT+CGG - chr1.3:7683487-7683506 MS.gene051508:CDS 30.0%
!! GAATAACCATGGTTTGTTTA+AGG - chr1.3:7681904-7681923 MS.gene051508:intron 30.0%
!! GCTTTGTTTGGTAAAAATAG+CGG - chr1.3:7682111-7682130 MS.gene051508:intron 30.0%
!! GGTGTTACTACATTTGTATT+TGG - chr1.3:7684953-7684972 MS.gene051508:intron 30.0%
!! TTGGTGTCAGAAATGAATTT+CGG + chr1.3:7684415-7684434 None:intergenic 30.0%
!!! CTTTTGAAGTTATTGGGAAA+TGG - chr1.3:7683646-7683665 MS.gene051508:CDS 30.0%
AACAAACCATGGTTATTCTC+AGG + chr1.3:7681902-7681921 None:intergenic 35.0%
AACATTGCTTTCAGTGTTTC+CGG + chr1.3:7685959-7685978 None:intergenic 35.0%
AACCATACTTTACAGGAACT+TGG - chr1.3:7685231-7685250 MS.gene051508:intron 35.0%
AAGAACCTTGATTGTTCATC+AGG + chr1.3:7686352-7686371 None:intergenic 35.0%
ATATGTATCTACAGCCAGAA+TGG - chr1.3:7683310-7683329 MS.gene051508:intron 35.0%
ATCAATCAGAAATGACTCCT+TGG + chr1.3:7686133-7686152 None:intergenic 35.0%
ATCGGAAAAAGAAAAAGGGA+AGG + chr1.3:7685579-7685598 None:intergenic 35.0%
CAACATTTGCAACAAGCAAA+CGG + chr1.3:7684657-7684676 None:intergenic 35.0%
CAACTGCAGTCACAATATAA+AGG + chr1.3:7682009-7682028 None:intergenic 35.0%
CACACATAAAGAGGAAAGTT+TGG - chr1.3:7683755-7683774 MS.gene051508:intron 35.0%
CAGAATGGAAAATTCAGCTA+TGG - chr1.3:7683325-7683344 MS.gene051508:intron 35.0%
CTGCAAGACCATAAATATGT+AGG + chr1.3:7685448-7685467 None:intergenic 35.0%
CTTAAGATGAATCGAAGAGA+TGG + chr1.3:7685387-7685406 None:intergenic 35.0%
CTTGATATTGTGGGAAATTG+AGG - chr1.3:7682253-7682272 MS.gene051508:intron 35.0%
GAATGTCTTAAGTCCAATTC+TGG - chr1.3:7683201-7683220 MS.gene051508:intron 35.0%
GCCATATAAACACTTCATTG+CGG - chr1.3:7684122-7684141 MS.gene051508:intron 35.0%
GTCATTCATTCATACTTGGA+AGG - chr1.3:7682956-7682975 MS.gene051508:CDS 35.0%
GTGAATGTTATCTTGGTATG+CGG - chr1.3:7682829-7682848 MS.gene051508:intron 35.0%
TAAAACCATGGTTATTCTCG+GGG - chr1.3:7682738-7682757 MS.gene051508:intron 35.0%
TAACGTAACCACAACACAAA+AGG + chr1.3:7682427-7682446 None:intergenic 35.0%
TAAGGAAACACTAAGTCACA+TGG + chr1.3:7683685-7683704 None:intergenic 35.0%
TAGTAGCTGCATAATCGTTA+TGG - chr1.3:7684720-7684739 MS.gene051508:CDS 35.0%
TCATTCAATCGACCTTAAGT+CGG + chr1.3:7683259-7683278 None:intergenic 35.0%
TGATTAGATTGTCAAGGTGT+AGG - chr1.3:7684932-7684951 MS.gene051508:intron 35.0%
TGCTTTGCAGATTCATAACT+TGG - chr1.3:7683045-7683064 MS.gene051508:intron 35.0%
TTAAAGGATCGAACTGTGAT+AGG + chr1.3:7684464-7684483 None:intergenic 35.0%
TTATGGTTGTCAAATGGTTC+TGG - chr1.3:7684790-7684809 MS.gene051508:intron 35.0%
TTGCAATTGTGGTTGTGATA+TGG - chr1.3:7682852-7682871 MS.gene051508:intron 35.0%
TTGTACTTTCTTTCTGATCC+CGG - chr1.3:7683087-7683106 MS.gene051508:intron 35.0%
TTGTGGTTGTGATATGGTTT+CGG - chr1.3:7682858-7682877 MS.gene051508:intron 35.0%
TTTCCTTATGCAATGCTTCT+AGG - chr1.3:7683697-7683716 MS.gene051508:CDS 35.0%
TTTGATCCTGAGAATAACCA+TGG - chr1.3:7681893-7681912 MS.gene051508:intron 35.0%
TTTGTGTTGTGGTTACGTTA+CGG - chr1.3:7682427-7682446 MS.gene051508:intron 35.0%
! AGGATTTTAAATTGGCGTTG+CGG - chr1.3:7682066-7682085 MS.gene051508:intron 35.0%
! ATCCAGGTGTGTTTCTAATA+TGG - chr1.3:7685332-7685351 MS.gene051508:intron 35.0%
! CAGATGGCAATTTAAAACCA+TGG - chr1.3:7682726-7682745 MS.gene051508:intron 35.0%
! CATAGCTGAATTTTCCATTC+TGG + chr1.3:7683327-7683346 None:intergenic 35.0%
! CTACATATTTATGGTCTTGC+AGG - chr1.3:7685446-7685465 MS.gene051508:intron 35.0%
! GCAATGAAGTGTTTATATGG+CGG + chr1.3:7684123-7684142 None:intergenic 35.0%
! GTCATCTTATTGTTAGCTCT+TGG - chr1.3:7685165-7685184 MS.gene051508:intron 35.0%
! GTTTGCTTGTTGCAAATGTT+GGG - chr1.3:7684656-7684675 MS.gene051508:CDS 35.0%
! TAAAAACTTTCAGGTCATGG+TGG - chr1.3:7684334-7684353 MS.gene051508:intron 35.0%
! TGGTGTCAGAAATGAATTTC+GGG + chr1.3:7684414-7684433 None:intergenic 35.0%
! TGTTGTCTTTTGTGGTTGTT+TGG - chr1.3:7682205-7682224 MS.gene051508:intron 35.0%
! TTAAATTGTTGTTGCGATGC+GGG - chr1.3:7682388-7682407 MS.gene051508:intron 35.0%
! TTTCTTATACTGGCTAGTGA+CGG - chr1.3:7685495-7685514 MS.gene051508:intron 35.0%
! TTTGCTTGTTGCAAATGTTG+GGG - chr1.3:7684657-7684676 MS.gene051508:CDS 35.0%
!!! AGTGTTTATATGGCGGATTT+TGG + chr1.3:7684116-7684135 None:intergenic 35.0%
!!! CAGAAGGCATTTTAATACCA+TGG - chr1.3:7682909-7682928 MS.gene051508:intron 35.0%
!!! GAGAACCCCTTTTTTTTAAG+AGG + chr1.3:7685758-7685777 None:intergenic 35.0%
!!! TTCTGGCTTTTTCATTAACC+AGG - chr1.3:7683218-7683237 MS.gene051508:intron 35.0%
AACATTGATCAGACACGTGA+TGG - chr1.3:7683542-7683561 MS.gene051508:intron 40.0%
AACTAGAGAGACTGCATTTC+CGG - chr1.3:7685937-7685956 MS.gene051508:intron 40.0%
ACAGTAATTGTGGTTGCAGA+TGG - chr1.3:7682710-7682729 MS.gene051508:intron 40.0%
ACCTCCGAAAATAAGTAGCA+TGG + chr1.3:7683494-7683513 None:intergenic 40.0%
ACTGCAATTGTAGTTGCAGA+CGG - chr1.3:7682511-7682530 MS.gene051508:intron 40.0%
ACTGCAGTTGTAGTTGCAAA+CGG - chr1.3:7682019-7682038 MS.gene051508:intron 40.0%
AGAAGAAAAACCTCCTGAGA+CGG + chr1.3:7683878-7683897 None:intergenic 40.0%
AGTAAAGGCGAAGGTCTATT+TGG + chr1.3:7685786-7685805 None:intergenic 40.0%
ATGCCTTCACAAATTGCCTA+TGG - chr1.3:7684166-7684185 MS.gene051508:intron 40.0%
CAACACAAAAGGCAACAAAC+AGG + chr1.3:7682416-7682435 None:intergenic 40.0%
CAATACAAACGGCAACAAAC+AGG + chr1.3:7682592-7682611 None:intergenic 40.0%
CACAGTTCGATCCTTTAAAC+TGG - chr1.3:7684466-7684485 MS.gene051508:intron 40.0%
CAGCAACAACGTATTGCTTA+AGG + chr1.3:7685304-7685323 None:intergenic 40.0%
CATAAGGAAAGTAAAGGCGA+AGG + chr1.3:7685795-7685814 None:intergenic 40.0%
CGGAAAAATTAAAGGAAGCC+TGG + chr1.3:7683239-7683258 None:intergenic 40.0%
CGTTTCCTGATGAACAATCA+AGG - chr1.3:7686344-7686363 MS.gene051508:CDS 40.0%
CTACAAACCTATGGCAGATT+TGG + chr1.3:7684434-7684453 None:intergenic 40.0%
CTCCAAGTTCCTGTAAAGTA+TGG + chr1.3:7685236-7685255 None:intergenic 40.0%
CTCCATATTAGAAACACACC+TGG + chr1.3:7685337-7685356 None:intergenic 40.0%
CTGACGGCAATTAAAAACCT+TGG - chr1.3:7682351-7682370 MS.gene051508:intron 40.0%
GCAACTAACCACAACACAAA+AGG + chr1.3:7682797-7682816 None:intergenic 40.0%
GGATAGAAAGAGATGGAGAT+AGG + chr1.3:7683473-7683492 None:intergenic 40.0%
GGTGAGAAACTACAAACCTA+TGG + chr1.3:7684443-7684462 None:intergenic 40.0%
GTAGCATGGATAGAAAGAGA+TGG + chr1.3:7683480-7683499 None:intergenic 40.0%
GTGTAGTTAAATTGTGGCCA+TGG + chr1.3:7684234-7684253 None:intergenic 40.0%
TAAAACCCCGAGAATAACCA+TGG + chr1.3:7682746-7682765 None:intergenic 40.0%
TAGAAACACACCTGGATTTC+CGG + chr1.3:7685329-7685348 None:intergenic 40.0%
TGAATCTGCAAAGCAACAGA+AGG + chr1.3:7683040-7683059 None:intergenic 40.0%
TGCATATGTGGTTGTGTTGT+CGG - chr1.3:7682662-7682681 MS.gene051508:intron 40.0%
TGGGAAATTGAGGATAGATG+CGG - chr1.3:7682263-7682282 MS.gene051508:intron 40.0%
TGTCAGAAATGAATTTCGGG+TGG + chr1.3:7684411-7684430 None:intergenic 40.0%
TTCTATCCTTTGCCTCTCAT+CGG + chr1.3:7685112-7685131 None:intergenic 40.0%
TTGACCAGTGTTGTCTATGA+TGG - chr1.3:7684090-7684109 MS.gene051508:intron 40.0%
TTGATATGCTGCTGCATATG+TGG - chr1.3:7682650-7682669 MS.gene051508:intron 40.0%
TTGGATAAGACATTAGGGCA+GGG + chr1.3:7686180-7686199 None:intergenic 40.0%
TTTACAGGAACTTGGAGAGT+CGG - chr1.3:7685239-7685258 MS.gene051508:intron 40.0%
! ATGAAAGAAGCGTATCAGAG+AGG - chr1.3:7686290-7686309 MS.gene051508:intron 40.0%
! CAATTGTGGTTGTGTTGTTG+AGG - chr1.3:7682289-7682308 MS.gene051508:intron 40.0%
! CGTTTGCTTGTTGCAAATGT+TGG - chr1.3:7684655-7684674 MS.gene051508:CDS 40.0%
! GCAACTGCAATTGTAGGTTT+TGG + chr1.3:7682890-7682909 None:intergenic 40.0%
! GCCGCAATGAAGTGTTTATA+TGG + chr1.3:7684126-7684145 None:intergenic 40.0%
! GTAGGTTGTGTTGTCTTTTG+TGG - chr1.3:7682197-7682216 MS.gene051508:intron 40.0%
! GTTTGTTGCCGTTTGTATTG+TGG - chr1.3:7682592-7682611 MS.gene051508:CDS 40.0%
! TATGGTCTTGCAGGAAGAAA+AGG - chr1.3:7685455-7685474 MS.gene051508:intron 40.0%
! TGTGGTTGTTTGGTGATTCT+TGG - chr1.3:7682215-7682234 MS.gene051508:intron 40.0%
! TTTGGTCTGGTTTGTGATCT+CGG + chr1.3:7685089-7685108 None:intergenic 40.0%
!! AAGCCTAGAAGCATTGCATA+AGG + chr1.3:7683703-7683722 None:intergenic 40.0%
!! AGGCTCTAAAAATCGAACCA+AGG - chr1.3:7686113-7686132 MS.gene051508:intron 40.0%
!! GTTTGTTGCCTTTTGTGTTG+TGG - chr1.3:7682416-7682435 MS.gene051508:intron 40.0%
!! TCCATGCTACTTATTTTCGG+AGG - chr1.3:7683490-7683509 MS.gene051508:CDS 40.0%
!!! CGTTACTTTTCGGCTTTGTT+TGG - chr1.3:7682099-7682118 MS.gene051508:intron 40.0%
!!! GATTTTTTTACCGCCACCAT+AGG + chr1.3:7684185-7684204 None:intergenic 40.0%
!!! GGCCTTTTTGGAGTTTTTGA+TGG - chr1.3:7683430-7683449 MS.gene051508:CDS 40.0%
!!! TTGCATGCTGCGTTACTTTT+CGG - chr1.3:7682089-7682108 MS.gene051508:intron 40.0%
AAACACTTCATTGCGGCCTA+TGG - chr1.3:7684129-7684148 MS.gene051508:intron 45.0%
ACATGCACGCACACATAAAG+AGG - chr1.3:7683746-7683765 MS.gene051508:intron 45.0%
ACTCCAGAGCTGTTATATGC+AGG - chr1.3:7684680-7684699 MS.gene051508:CDS 45.0%
AGGCAAAGGATAGAAGATGC+GGG - chr1.3:7685117-7685136 MS.gene051508:intron 45.0%
ATGCAGAAGAAGCAGCAAAG+AGG - chr1.3:7686264-7686283 MS.gene051508:intron 45.0%
CAAACGGTCACCAACAAGAA+TGG + chr1.3:7684641-7684660 None:intergenic 45.0%
CATATGTGGTTGTGTTGTCG+GGG - chr1.3:7682664-7682683 MS.gene051508:intron 45.0%
CATTGAAGATCTCTTGCCAG+GGG + chr1.3:7683362-7683381 None:intergenic 45.0%
CCACCATAGGCAATTTGTGA+AGG + chr1.3:7684172-7684191 None:intergenic 45.0%
CCATTGAAGATCTCTTGCCA+GGG + chr1.3:7683363-7683382 None:intergenic 45.0%
CCTACAATTGCAGTTGCAGA+AGG - chr1.3:7682893-7682912 MS.gene051508:intron 45.0%
CCTTCACAAATTGCCTATGG+TGG - chr1.3:7684169-7684188 MS.gene051508:intron 45.0%
CCTTCTGCAACTGCAATTGT+AGG + chr1.3:7682896-7682915 None:intergenic 45.0%
CTCCAGAGCTGTTATATGCA+GGG - chr1.3:7684681-7684700 MS.gene051508:CDS 45.0%
GAGGCAAAGGATAGAAGATG+CGG - chr1.3:7685116-7685135 MS.gene051508:intron 45.0%
GATGATACACCTGTTAGTGG+TGG - chr1.3:7681745-7681764 MS.gene051508:CDS 45.0%
GCAATACGTTGTTGCTGATC+CGG - chr1.3:7685307-7685326 MS.gene051508:intron 45.0%
GCAATTCCATTCCCCCTTAA+CGG - chr1.3:7684206-7684225 MS.gene051508:intron 45.0%
GCATATGTGGTTGTGTTGTC+GGG - chr1.3:7682663-7682682 MS.gene051508:intron 45.0%
GCTGATGATACACCTGTTAG+TGG - chr1.3:7681742-7681761 MS.gene051508:CDS 45.0%
GCTTCTTCTGCATCCTCAAT+TGG + chr1.3:7686257-7686276 None:intergenic 45.0%
GGCTGAAATGGCAATTGTTG+TGG - chr1.3:7685902-7685921 MS.gene051508:intron 45.0%
GTGGGATGTTGTCTCAAATG+AGG - chr1.3:7685521-7685540 MS.gene051508:intron 45.0%
GTTATATGCAGGGGTGGAAA+TGG - chr1.3:7684691-7684710 MS.gene051508:CDS 45.0%
GTTGGATAAGACATTAGGGC+AGG + chr1.3:7686181-7686200 None:intergenic 45.0%
TAAGACATTAGGGCAGGGTT+TGG + chr1.3:7686175-7686194 None:intergenic 45.0%
TCACAAATTGCCTATGGTGG+CGG - chr1.3:7684172-7684191 MS.gene051508:intron 45.0%
TCCAGAGCTGTTATATGCAG+GGG - chr1.3:7684682-7684701 MS.gene051508:CDS 45.0%
TCCATTGAAGATCTCTTGCC+AGG + chr1.3:7683364-7683383 None:intergenic 45.0%
TCTGACACCAAATCTGCCAT+AGG - chr1.3:7684424-7684443 MS.gene051508:intron 45.0%
TCTTCGTCTCGTAATAGCTC+TGG - chr1.3:7686368-7686387 MS.gene051508:CDS 45.0%
TGGTTGTGATATGGTTTCGG+AGG - chr1.3:7682861-7682880 MS.gene051508:intron 45.0%
TGTTCTGTCACCTTCAAGTC+AGG - chr1.3:7681711-7681730 MS.gene051508:CDS 45.0%
TTGCGGTTGTATGTTGTACG+AGG - chr1.3:7681870-7681889 MS.gene051508:intron 45.0%
TTGGCCATCATAGACAACAC+TGG + chr1.3:7684097-7684116 None:intergenic 45.0%
TTGGTATGCGGTTGCAATTG+TGG - chr1.3:7682841-7682860 MS.gene051508:intron 45.0%
TTGTATGTGGGTGGCTGAAA+TGG - chr1.3:7685890-7685909 MS.gene051508:intron 45.0%
! ACAAGAATTGACGGCGTTGA+TGG - chr1.3:7683397-7683416 MS.gene051508:CDS 45.0%
! ATACACCTGTTAGTGGTGGA+GGG - chr1.3:7681749-7681768 MS.gene051508:CDS 45.0%
! ATTTGTGAAGGCATGCTCCA+TGG + chr1.3:7684160-7684179 None:intergenic 45.0%
! TGGTTTGTGATCTCGGGAAA+CGG + chr1.3:7685082-7685101 None:intergenic 45.0%
! TTGGTCTGGTTTGTGATCTC+GGG + chr1.3:7685088-7685107 None:intergenic 45.0%
!! TTTCGGAGGTGCTAAGCTAA+GGG - chr1.3:7683504-7683523 MS.gene051508:CDS 45.0%
!!! CTTTTTTCGAACACCGTCTC+AGG - chr1.3:7683862-7683881 MS.gene051508:intron 45.0%
!!! TTTTCGGAGGTGCTAAGCTA+AGG - chr1.3:7683503-7683522 MS.gene051508:CDS 45.0%
!! AAAAAAAATTAAATAATTAC+AGG + chr1.3:7683962-7683981 None:intergenic 5.0%
AACCAGACCAAACCGATGAG+AGG - chr1.3:7685097-7685116 MS.gene051508:intron 50.0%
ACCAAACCGATGAGAGGCAA+AGG - chr1.3:7685103-7685122 MS.gene051508:intron 50.0%
ACCCCTGCATATAACAGCTC+TGG + chr1.3:7684686-7684705 None:intergenic 50.0%
AGAGCTGTTATATGCAGGGG+TGG - chr1.3:7684685-7684704 MS.gene051508:CDS 50.0%
ATGCAGGGGTGGAAATGGTA+AGG - chr1.3:7684696-7684715 MS.gene051508:CDS 50.0%
CAAAGGATAGAAGATGCGGG+AGG - chr1.3:7685120-7685139 MS.gene051508:intron 50.0%
CCATTGTGGTTGTGTTGCAG+AGG + chr1.3:7681947-7681966 None:intergenic 50.0%
CCCTGGCAAGAGATCTTCAA+TGG - chr1.3:7683360-7683379 MS.gene051508:intron 50.0%
CCTCTGCAACACAACCACAA+TGG - chr1.3:7681944-7681963 MS.gene051508:intron 50.0%
GATACACCTGTTAGTGGTGG+AGG - chr1.3:7681748-7681767 MS.gene051508:CDS 50.0%
GATAGATGCGGCTGCAATTG+TGG - chr1.3:7682275-7682294 MS.gene051508:intron 50.0%
GCTTCCACTGCCATTCTTGT+TGG - chr1.3:7684628-7684647 MS.gene051508:intron 50.0%
GTCACCAACAAGAATGGCAG+TGG + chr1.3:7684635-7684654 None:intergenic 50.0%
TATGGATATGCTAGCTCCCC+TGG - chr1.3:7683343-7683362 MS.gene051508:intron 50.0%
TGTTGCTGATCCGGAAATCC+AGG - chr1.3:7685316-7685335 MS.gene051508:intron 50.0%
! GCAGCATGAACCTGACTTGA+AGG + chr1.3:7681724-7681743 None:intergenic 50.0%
! TCCTTTGCCTCTCATCGGTT+TGG + chr1.3:7685107-7685126 None:intergenic 50.0%
! TTTTCGAACACCGTCTCAGG+AGG - chr1.3:7683865-7683884 MS.gene051508:intron 50.0%
!! ATGCGGGAGGCTTTGTTATG+TGG - chr1.3:7685133-7685152 MS.gene051508:intron 50.0%
!! CTTGCTGTTTCTCGCGCATT+TGG - chr1.3:7685269-7685288 MS.gene051508:intron 50.0%
!! TGCGGGAGGCTTTGTTATGT+GGG - chr1.3:7685134-7685153 MS.gene051508:intron 50.0%
!!! GGCGAAGTTGTTGGCCTTTT+TGG - chr1.3:7683418-7683437 MS.gene051508:CDS 50.0%
ACAGGAACTTGGAGAGTCGG+TGG - chr1.3:7685242-7685261 MS.gene051508:intron 55.0%
ATGGCACCGTTAAGGGGGAA+TGG + chr1.3:7684215-7684234 None:intergenic 55.0%
CACAATGGCTGCAGCATCTG+CGG - chr1.3:7681959-7681978 MS.gene051508:intron 55.0%
CGGGAAACGGCAATGGCTAA+AGG + chr1.3:7685069-7685088 None:intergenic 55.0%
GCAACAAACAGGCATCCGCA+TGG + chr1.3:7682581-7682600 None:intergenic 55.0%
GTGATCTCGGGAAACGGCAA+TGG + chr1.3:7685076-7685095 None:intergenic 55.0%
TGTGGCCATGGCACCGTTAA+GGG + chr1.3:7684222-7684241 None:intergenic 55.0%
TTGTGGCCATGGCACCGTTA+AGG + chr1.3:7684223-7684242 None:intergenic 55.0%
! ATTCCCCCTTAACGGTGCCA+TGG - chr1.3:7684214-7684233 MS.gene051508:intron 55.0%
!! ACTGGCTAGTGACGGACTGT+GGG - chr1.3:7685503-7685522 MS.gene051508:intron 55.0%
!! GGAGGCTTTGTTATGTGGGC+TGG - chr1.3:7685138-7685157 MS.gene051508:intron 55.0%
!! GGCGTTGATGGCGAAGTTGT+TGG - chr1.3:7683409-7683428 MS.gene051508:CDS 55.0%
!! TACTGGCTAGTGACGGACTG+TGG - chr1.3:7685502-7685521 MS.gene051508:intron 55.0%
!! TGCCTCTCATCGGTTTGGTC+TGG + chr1.3:7685102-7685121 None:intergenic 55.0%
ATGCTCCATGGCAGCGCCAT+AGG + chr1.3:7684148-7684167 None:intergenic 60.0%
CGCAGATGCTGCAGCCATTG+TGG + chr1.3:7681961-7681980 None:intergenic 60.0%
CTGAGCCCTCCACCACTAAC+AGG + chr1.3:7681757-7681776 None:intergenic 60.0%
GTGGCCATGGCACCGTTAAG+GGG + chr1.3:7684221-7684240 None:intergenic 60.0%
TGGCCATGGCACCGTTAAGG+GGG + chr1.3:7684220-7684239 None:intergenic 60.0%
! CTGTTAGTGGTGGAGGGCTC+AGG - chr1.3:7681755-7681774 MS.gene051508:CDS 60.0%
CATCTGCGGTTGCGCTGTCG+AGG - chr1.3:7681973-7681992 MS.gene051508:intron 65.0%
TGCGGCCTATGGCGCTGCCA+TGG - chr1.3:7684140-7684159 MS.gene051508:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 7681694 7686394 7681694 ID=MS.gene051508
chr1.3 mRNA 7681694 7686394 7681694 ID=MS.gene051508.t1;Parent=MS.gene051508
chr1.3 exon 7686312 7686394 7686312 ID=MS.gene051508.t1.exon1;Parent=MS.gene051508.t1
chr1.3 CDS 7686312 7686394 7686312 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7684637 7684764 7684637 ID=MS.gene051508.t1.exon2;Parent=MS.gene051508.t1
chr1.3 CDS 7684637 7684764 7684637 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7683643 7683741 7683643 ID=MS.gene051508.t1.exon3;Parent=MS.gene051508.t1
chr1.3 CDS 7683643 7683741 7683643 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7683376 7683534 7683376 ID=MS.gene051508.t1.exon4;Parent=MS.gene051508.t1
chr1.3 CDS 7683376 7683534 7683376 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7682929 7683015 7682929 ID=MS.gene051508.t1.exon5;Parent=MS.gene051508.t1
chr1.3 CDS 7682929 7683015 7682929 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7682751 7682842 7682751 ID=MS.gene051508.t1.exon6;Parent=MS.gene051508.t1
chr1.3 CDS 7682751 7682842 7682751 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7682546 7682620 7682546 ID=MS.gene051508.t1.exon7;Parent=MS.gene051508.t1
chr1.3 CDS 7682546 7682620 7682546 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
chr1.3 exon 7681694 7681855 7681694 ID=MS.gene051508.t1.exon8;Parent=MS.gene051508.t1
chr1.3 CDS 7681694 7681855 7681694 ID=cds.MS.gene051508.t1;Parent=MS.gene051508.t1
Gene Sequence

>MS.gene051508

ATGGGCTATCTCAATTCTGTTCTGTCACCTTCAAGTCAGGTTCATGCTGCTGATGATACACCTGTTAGTGGTGGAGGGCTCAGGTTTGTTAATGTTCTTAATTTTTGTCTAGATCTATAAATTTTATGAAATTGTTTTGTTTTATCATTTTTGTTGTTTAAGGTTTTAAATTGATGTTGCGGTTGTATGTTGTACGAGGTTTGATCCTGAGAATAACCATGGTTTGTTTAAGGTTTTAAAAACTCAGAAGCCTCTGCAACACAACCACAATGGCTGCAGCATCTGCGGTTGCGCTGTCGAGGCTTCTGAAAACCTTTATATTGTGACTGCAGTTGTAGTTGCAAACGGAAATTTAAAACCATGGTTATTCTTAGGATTTTAAATTGGCGTTGCGGTTGCATGCTGCGTTACTTTTCGGCTTTGTTTGGTAAAAATAGCGGATAGCTGATAAGCTAGCTTACATAGAATGGTTTTTCTTAAGGTTAAAAATTGATATTGCAGTTGTAGGTTGTGTTGTCTTTTGTGGTTGTTTGGTGATTCTTGGTATTGTGAAAATTGTCTTGATATTGTGGGAAATTGAGGATAGATGCGGCTGCAATTGTGGTTGTGTTGTTGAGGCTTTTAAAAACATTTATATTTTAATAACAATTGTAGTTGCTGACGGCAATTAAAAACCTTGGTTATTCTCAAGGTTTTAAATTGTTGTTGCGATGCGGGTGCCTGTTTGTTGCCTTTTGTGTTGTGGTTACGTTACGGTGTTTGATATCGTGAAAAATTATCTTGATGTGTGGCTGCAATTGTGTCGCGTTGTCGTGCGACTGCAATTGTAGTTGCAGACGGCAATTTAAAGTCATGATTATTCTCAAGGTTTTAAATTGTTGTTGCCATGCGGATGCCTGTTTGTTGCCGTTTGTATTGTGGTTAAGTTGCGATGTTTGATATTGTGAAAACTTATCTTGATATGCTGCTGCATATGTGGTTGTGTTGTCGGGGCTTCTGAAAACCTTTATATTGTCACAGTAATTGTGGTTGCAGATGGCAATTTAAAACCATGGTTATTCTCGGGGTTTTAACTTGCTGTTGTGATTGTTTGTTTGTTGCCTTTTGTGTTGTGGTTAGTTGCGATTTTGATATTGTGAATGTTATCTTGGTATGCGGTTGCAATTGTGGTTGTGATATGGTTTCGGAGGCTTCCAAAACCTACAATTGCAGTTGCAGAAGGCATTTTAATACCATGGTTATTGTTATTGTTGTTGGCTAATGTCATTCATTCATACTTGGAAGGTTTAGTATTGAAAATTTGAAAATTTTCATGTTAAATTTGTCTCTAGTTTTCTATTGTTCCTTCTGTTGCTTTGCAGATTCATAACTTGGTTTTATGTGGTTATTGTCTTTGTACTTTCTTTCTGATCCCGGTTTGAGATGAAAAATTATTGCAATTTTTGAGATTTTTGTTTACTATTGTTTGGTTGATATTATTGTTGTGTTGTTCAATCTATGTTTTGTTGAATGTCTTAAGTCCAATTCTGGCTTTTTCATTAACCAGGCTTCCTTTAATTTTTCCGACTTAAGGTCGATTGAATGAGATGTTTTTTTTGACATACTTTGTTGTTTTGATATGTATCTACAGCCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTATATTTGCATAATTCTCCTATCTCCATCTCTTTCTATCCATGCTACTTATTTTCGGAGGTGCTAAGCTAAGGGACTAGTTGTAGTTGAAACATTGATCAGACACGTGATGGAGATTCGACCCATAGAGAGCTAATAAGATGTTTTTACCTATATTTTTTCTTTCCTTAATTTGTTTCTGTCAATGGATTTTCCTTTTGAAGTTATTGGGAAATGGGAAATTAATTGTTCCATGTGACTTAGTGTTTCCTTATGCAATGCTTCTAGGCTTTTTGCTTTTATTTTCTCAAATGCACATGCACGCACACATAAAGAGGAAAGTTTGGATCTGTTTACAGTTATTGTCTCATAAAGTATAAATCTGGTTTTGGTTGTTTTGACTTTTGATTTTTCTGATCGGACACAGTACTCTTTTTTCGAACACCGTCTCAGGAGGTTTTTCTTCTAAGTGATCTGTCTTTGAGAATAATTTCGAGAGGCATCGCCATTGTCTTATACTTTCTGTTGCCTGTAATTATTTAATTTTTTTTTTATGAAGAGCCTTCAATTCATTAATAGCAATTTTTCGGTGCGATGTTTTTCTTTATATGGACTTGGAAAGTAATGGTACTTCTTAATCCTTTAAGAAGTATTGACTCTTGACCAGTGTTGTCTATGATGGCCAAAATCCGCCATATAAACACTTCATTGCGGCCTATGGCGCTGCCATGGAGCATGCCTTCACAAATTGCCTATGGTGGCGGTAAAAAAATCTGCAATTCCATTCCCCCTTAACGGTGCCATGGCCACAATTTAACTACACTGTTCTTGACTAGTATTTATGACCTATGCCTGATACTATACTATATCTATTAGAAATGAAGGTAGCTACAACTTTCTTGTTAAAAACTTTCAGGTCATGGTGGTGCTCGCGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGCCACCCGAAATTCATTTCTGACACCAAATCTGCCATAGGTTTGTAGTTTCTCACCTATCACAGTTCGATCCTTTAAACTGGTTTTCTTCAATTCGCTAAATATGTAGAATAATACTGCTCCTGCCATTTGTATTTTTTTTACACAGCTGATGCGTATACGCATACCGACTCTGAATTTCTGAAATCAGAGAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGGTAAGGCTAGTAGCTGCATAATCGTTATGGTTGTCAAATGGAATTTGATTTTCTAAAACTTGAGGAAATCATAATCGTTATGGTTGTCAAATGGTTCTGGAAGTTTCTATATGATGTATTTTTAGCTCTATGCTTTTCTTTCTAAATGAACGTTGAAAGACTATTTTTCGTATCACTTGTGGATGAAATATAAAAGGTGTTAATTCAGTTTTAATTGTTTGATTAGATTGTCAAGGTGTAGGTGTTACTACATTTGTATTTGGTCTCTTGCGTATCCGTTGAGAATTGAGAAAAACATTTCAACTTTTCGATTTCAAGAATTGGTAAAATATTATGATTTACTATTTTTTTTTCCTTTAGCCATTGCCGTTTCCCGAGATCACAAACCAGACCAAACCGATGAGAGGCAAAGGATAGAAGATGCGGGAGGCTTTGTTATGTGGGCTGGTAAAGTCATCTTATTGTTAGCTCTTGGGATTTGATTTATATTTTTTTTTCTATCTCTATGGAGTACTTAAAACCATACTTTACAGGAACTTGGAGAGTCGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTCCTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGTGTGTTTCTAATATGGAGACAGACTGACATCCATTCTTTGATATTCCATCTCTTCGATTCATCTTAAGAGAGAAAATTATGTTTCATATGAGAAATTGAAAATTAACCTACATATTTATGGTCTTGCAGGAAGAAAAGGTCGATAGTTCTCTTGAGTTTCTTATACTGGCTAGTGACGGACTGTGGGATGTTGTCTCAAATGAGGTTTGCTATCATTTTCACTTCCTTTGTTTTTTTCCTTCCCTTTTTCTTTTTCCGATAAATATAGTGCATTTTCGTAACCACAAGAGATATAAATGAATTGATTTGTATCAAGATTATTTGGTAAAGTTAACATTTGTTCTGTTTTAAATAGAGTTATAGCCTAGCATTTTTGTAAAATATTAGCGAACAAATTTAAAAGGGTTCTCTTAAAGCCTCTTAAAAAAAAGGGGTTCTCTTAAACCAAATAGACCTTCGCCTTTACTTTCCTTATGTAGATTAAAGGAGCAAAATGCGAGAAACAGATAGAGCAAGACCCCATTTACTTTGTAACATTTTAAATTTTTATTTTGTATGTGGGTGGCTGAAATGGCAATTGTTGTGGAGTATGAAAGCTAACTAGAGAGACTGCATTTCCGGAAACACTGAAAGCAATGTTTTGAAAAGAAAAAAATTAACAATTTTTAAAAATATCCAATATGTTTTTAAATTACATTTTCAAAAACTTCCATAACGTCTTCTCTAATTTTTATTTTATCCATGGAATGGAAACAAAAAATATCGGAAATAAACAGGCTCTAAAAATCGAACCAAGGAGTCATTTCTGATTGATGAGTTGTAAAATTGATAATCCAAACCCTGCCCTAATGTCTTATCCAACTCTAACTCAAACTTTTTTCTACTTTTCTTCAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATGCAGAAGAAGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCCTGATGAACAATCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA
Protein sequence

>MS.gene051508.t1

MGYLNSVLSPSSQVHAADDTPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFLMNNQGSSSRNSSG