AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051825

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051825.t1 MTR_4g125700 99.677 310 1 0 54 363 166 475 0.0 641
MS.gene051825.t1 MTR_2g099510 86.731 309 41 0 54 362 187 495 0.0 578
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051825.t1 AT4G29840 87.379 309 39 0 54 362 182 490 0.0 574
MS.gene051825.t1 AT1G72810 85.806 310 43 1 54 362 173 482 0.0 565

Find 93 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAATGTGTAAAGATTT+AGG 0.134689 8.2:+7141974 MS.gene051825:CDS
TTCTGAATTGCCGATATATT+TGG 0.177867 8.2:+7141811 MS.gene051825:CDS
AGTAAGATTGATTATCATTC+TGG 0.199505 8.2:+7142376 MS.gene051825:CDS
CTCAGGAATAATGGGGTTAT+TGG 0.245982 8.2:+7142298 MS.gene051825:CDS
ATTGTACCTGGTGGAAATTT+AGG 0.246107 8.2:+7141926 MS.gene051825:CDS
ATATCATCAGGGTGGATTTC+TGG 0.247855 8.2:-7141401 None:intergenic
TTGATTAAACTCAGGAATAA+TGG 0.260884 8.2:+7142289 MS.gene051825:CDS
TCAAAATGTGTAAAGATTTA+GGG 0.279636 8.2:+7141975 MS.gene051825:CDS
ATGGTTGTATGAAGCTGATT+AGG 0.316364 8.2:+7141780 MS.gene051825:CDS
ACCACTTGGCCTTACGGTTC+AGG 0.317729 8.2:+7141350 MS.gene051825:CDS
TTGTAGGCATGAACGATCTT+TGG 0.318466 8.2:+7141483 MS.gene051825:CDS
TGATTAAACTCAGGAATAAT+GGG 0.322866 8.2:+7142290 MS.gene051825:CDS
GGCCTTACGGTTCAGGTGTA+TGG 0.326197 8.2:+7141357 MS.gene051825:CDS
TTGTACCTGGTGGAAATTTA+GGG 0.337501 8.2:+7141927 MS.gene051825:CDS
TTCAATTCGTAAACTATTCA+AGG 0.352361 8.2:-7141840 None:intergenic
CACTGTGGTAATAGCCATAC+TGG 0.361097 8.2:+7141512 MS.gene051825:CDS
GATCTTTGAAGCTTCCAGTA+TGG 0.386403 8.2:-7141526 None:intergenic
CGAAGTTCGACGGCGCGTAC+TGG 0.391694 8.2:+7141297 MS.gene051825:CDS
ACTGGAAGCTTCAAAGATCT+TGG 0.393842 8.2:+7141530 MS.gene051825:CDS
TGTAGGCATGAACGATCTTT+GGG 0.399165 8.2:+7141484 MS.gene051825:CDS
TTGTATTTGTATTATAAGAA+TGG 0.406563 8.2:+7142052 MS.gene051825:CDS
TCTGCTTATTGCGCTTCAGC+TGG 0.409965 8.2:+7141653 MS.gene051825:CDS
TATCATTCTGGGAATATTGC+TGG 0.410252 8.2:+7142388 MS.gene051825:CDS
AAGGAATTCGCCAAATATAT+CGG 0.411303 8.2:-7141821 None:intergenic
ATGTTTATTTGTCCTCATAC+TGG 0.412669 8.2:+7142250 MS.gene051825:CDS
ATCCATCAATTCCTCTTCAC+TGG 0.414822 8.2:-7142200 None:intergenic
TTGAATAGTTTACGAATTGA+AGG 0.416111 8.2:+7141842 MS.gene051825:CDS
ATGGCACTTGCTGATTCAAC+TGG 0.418295 8.2:+7142226 MS.gene051825:CDS
TTTGCTTCTGCTATTCAGAT+TGG 0.423112 8.2:+7142112 MS.gene051825:CDS
AGCCAGTGAAGAGGAATTGA+TGG 0.425665 8.2:+7142198 MS.gene051825:CDS
AATGACTGTGCTTGTTAGTC+AGG 0.431806 8.2:+7141553 MS.gene051825:CDS
GGGAAAACCACTTGGCCTTA+CGG 0.436987 8.2:+7141344 MS.gene051825:CDS
TTCAGGTGTATGGAGCAAAA+AGG 0.437179 8.2:+7141367 MS.gene051825:CDS
AAAGCGCTAACGATATCATC+AGG 0.438146 8.2:-7141413 None:intergenic
TTTGCAGCAGTTTGATTGGC+AGG 0.441607 8.2:+7141889 MS.gene051825:CDS
TGGTTGTATGAAGCTGATTA+GGG 0.444344 8.2:+7141781 MS.gene051825:CDS
ACAGCTCTATCAATTGAAAC+AGG 0.468555 8.2:-7142139 None:intergenic
GTAAGATTGATTATCATTCT+GGG 0.468628 8.2:+7142377 MS.gene051825:CDS
ATTTGTATTATAAGAATGGT+TGG 0.468821 8.2:+7142056 MS.gene051825:CDS
AACCTCTTCGACTCGCGTGT+GGG 0.484266 8.2:+7141323 MS.gene051825:CDS
CCAGGTACAATCACCCAATC+AGG 0.486304 8.2:-7141914 None:intergenic
GGAGTTGGTTGTGCTTCCAC+CGG 0.488070 8.2:+7141611 MS.gene051825:CDS
AACCGTCCGTTGGTCGGAGT+TGG 0.488563 8.2:+7141596 MS.gene051825:CDS
TTGATTGGCAGGTACCTGAT+TGG 0.489621 8.2:+7141900 MS.gene051825:CDS
CGCGTGTGGGGAAAACCACT+TGG 0.493520 8.2:+7141336 MS.gene051825:CDS
CCTGATTGGGTGATTGTACC+TGG 0.494816 8.2:+7141914 MS.gene051825:CDS
TGATTGGCAGGTACCTGATT+GGG 0.499461 8.2:+7141901 MS.gene051825:CDS
TGGAGCCAGTGAGAGGGTTG+TGG 0.505753 8.2:+7142318 MS.gene051825:CDS
CAACCTCTTCGACTCGCGTG+TGG 0.509904 8.2:+7141322 MS.gene051825:CDS
TTGATTCAACCGGTATCAAA+TGG 0.513680 8.2:+7141725 MS.gene051825:CDS
GTGGTTGTTAGTACTGCTCA+TGG 0.517105 8.2:+7142337 MS.gene051825:CDS
ACCAATGCACCATTTGATAC+CGG 0.522774 8.2:-7141734 None:intergenic
TCGCGAGTGCTTCGATGTCA+TGG 0.529208 8.2:-7141277 None:intergenic
AACCGCGCAGTTGATTCAAC+CGG 0.530203 8.2:+7141715 MS.gene051825:CDS
GTTAAAGCCACACCAGTATG+AGG 0.530207 8.2:-7142262 None:intergenic
ACCGGTATCAAATGGTGCAT+TGG 0.530776 8.2:+7141733 MS.gene051825:CDS
TGTTGATAAGATACCAAGGC+TGG 0.532452 8.2:+7142000 MS.gene051825:CDS
TAACTGCTTTGATTAAACTC+AGG 0.539179 8.2:+7142281 MS.gene051825:CDS
AACAACCACAACCCTCTCAC+TGG 0.543564 8.2:-7142323 None:intergenic
ACCTCTTCGACTCGCGTGTG+GGG 0.547841 8.2:+7141324 MS.gene051825:CDS
GCTTGTGCACAAACCAGCCT+TGG 0.551031 8.2:-7142013 None:intergenic
TGCTTCCACCGGTGATACAT+CGG 0.553305 8.2:+7141622 MS.gene051825:CDS
TTAGTCAGGTAAATCGCCTC+CGG 0.556393 8.2:+7141567 MS.gene051825:CDS
TATGCATTGAAGAATTCTGA+TGG 0.567257 8.2:+7142163 MS.gene051825:CDS
CAGCGCAGCCGATGTATCAC+CGG 0.572600 8.2:-7141630 None:intergenic
TCCCCACACGCGAGTCGAAG+AGG 0.573166 8.2:-7141325 None:intergenic
ATGCATTGAAGAATTCTGAT+GGG 0.574216 8.2:+7142164 MS.gene051825:CDS
TATTTGTCCTCATACTGGTG+TGG 0.574702 8.2:+7142255 MS.gene051825:CDS
GAAGCACTCGCGAAGTTCGA+CGG 0.577029 8.2:+7141287 MS.gene051825:CDS
GGGTTATTGGAGCCAGTGAG+AGG 0.577743 8.2:+7142311 MS.gene051825:CDS
GATTAAACTCAGGAATAATG+GGG 0.580133 8.2:+7142291 MS.gene051825:CDS
AAAATGAACCGTCCGTTGGT+CGG 0.591612 8.2:+7141590 MS.gene051825:CDS
TTCTTATAATACAAATACAA+AGG 0.596623 8.2:-7142049 None:intergenic
CTCCATACACCTGAACCGTA+AGG 0.596883 8.2:-7141359 None:intergenic
GCACAACCAACTCCGACCAA+CGG 0.599617 8.2:-7141602 None:intergenic
CGCAGCCGATGTATCACCGG+TGG 0.601314 8.2:-7141627 None:intergenic
TGTTGAGGAAGCCAGTGAAG+AGG 0.612541 8.2:+7142189 MS.gene051825:CDS
CCGGAAAATGAACCGTCCGT+TGG 0.613505 8.2:+7141586 MS.gene051825:CDS
AACCAACTCCGACCAACGGA+CGG 0.618009 8.2:-7141598 None:intergenic
GAATTCTGATGGGATTGTTG+AGG 0.621403 8.2:+7142174 MS.gene051825:CDS
CATCAGGGTGGATTTCTGGT+AGG 0.634205 8.2:-7141397 None:intergenic
GGTTATTGGAGCCAGTGAGA+GGG 0.634474 8.2:+7142312 MS.gene051825:CDS
ACCTGAACCGTAAGGCCAAG+TGG 0.644246 8.2:-7141351 None:intergenic
AGAGTTTAAAGCGATTAAAG+CGG 0.650024 8.2:+7142081 MS.gene051825:CDS
CGCTAACGATATCATCAGGG+TGG 0.654724 8.2:-7141409 None:intergenic
ATATTCCCTAAATTTCCACC+AGG 0.655231 8.2:-7141932 None:intergenic
AGAGGAATTGATGGATGCAA+TGG 0.657723 8.2:+7142207 MS.gene051825:CDS
GGCTTGTTGATAAGATACCA+AGG 0.657922 8.2:+7141996 MS.gene051825:CDS
GCTGGTAGGAAAACAATCGA+AGG 0.673402 8.2:-7141680 None:intergenic
AAGCGCTAACGATATCATCA+GGG 0.689325 8.2:-7141412 None:intergenic
GATCTTTGGGTTAAACACTG+TGG 0.724956 8.2:+7141497 MS.gene051825:CDS
TACCGGTTGAATCAACTGCG+CGG 0.770329 8.2:-7141717 None:intergenic
GATTGGGTGATTGTACCTGG+TGG 0.786775 8.2:+7141917 MS.gene051825:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTATAATACAAATACAA+AGG - chr8.2:7142052-7142071 None:intergenic 15.0%
!! TTGTATTTGTATTATAAGAA+TGG + chr8.2:7142052-7142071 MS.gene051825:CDS 15.0%
!!! AATATTTATGCATTTTACAA+AGG + chr8.2:7141950-7141969 MS.gene051825:CDS 15.0%
!! ATTTGTATTATAAGAATGGT+TGG + chr8.2:7142056-7142075 MS.gene051825:CDS 20.0%
!! TCAAAATGTGTAAAGATTTA+GGG + chr8.2:7141975-7141994 MS.gene051825:CDS 20.0%
!! TTCAAAATGTGTAAAGATTT+AGG + chr8.2:7141974-7141993 MS.gene051825:CDS 20.0%
! AGTAAGATTGATTATCATTC+TGG + chr8.2:7142376-7142395 MS.gene051825:CDS 25.0%
! GTAAGATTGATTATCATTCT+GGG + chr8.2:7142377-7142396 MS.gene051825:CDS 25.0%
! TGATTAAACTCAGGAATAAT+GGG + chr8.2:7142290-7142309 MS.gene051825:CDS 25.0%
! TTCAATTCGTAAACTATTCA+AGG - chr8.2:7141843-7141862 None:intergenic 25.0%
! TTGAATAGTTTACGAATTGA+AGG + chr8.2:7141842-7141861 MS.gene051825:CDS 25.0%
! TTGATTAAACTCAGGAATAA+TGG + chr8.2:7142289-7142308 MS.gene051825:CDS 25.0%
!! AAGGTAACTCTAATCTTTTA+GGG + chr8.2:7141438-7141457 MS.gene051825:intron 25.0%
!!! AGTATTGATACTGATTTTGA+TGG + chr8.2:7141761-7141780 MS.gene051825:CDS 25.0%
AAGGAATTCGCCAAATATAT+CGG - chr8.2:7141824-7141843 None:intergenic 30.0%
ATGCATTGAAGAATTCTGAT+GGG + chr8.2:7142164-7142183 MS.gene051825:CDS 30.0%
ATGTTTATTTGTCCTCATAC+TGG + chr8.2:7142250-7142269 MS.gene051825:CDS 30.0%
GATTAAACTCAGGAATAATG+GGG + chr8.2:7142291-7142310 MS.gene051825:CDS 30.0%
TAACTGCTTTGATTAAACTC+AGG + chr8.2:7142281-7142300 MS.gene051825:CDS 30.0%
TATGCATTGAAGAATTCTGA+TGG + chr8.2:7142163-7142182 MS.gene051825:CDS 30.0%
TTCTGAATTGCCGATATATT+TGG + chr8.2:7141811-7141830 MS.gene051825:CDS 30.0%
! AGAGTTTAAAGCGATTAAAG+CGG + chr8.2:7142081-7142100 MS.gene051825:CDS 30.0%
! AGGTAACTCTAATCTTTTAG+GGG + chr8.2:7141439-7141458 MS.gene051825:intron 30.0%
! GAAGGTAACTCTAATCTTTT+AGG + chr8.2:7141437-7141456 MS.gene051825:intron 30.0%
ACAGCTCTATCAATTGAAAC+AGG - chr8.2:7142142-7142161 None:intergenic 35.0%
ATATTCCCTAAATTTCCACC+AGG - chr8.2:7141935-7141954 None:intergenic 35.0%
ATGGTTGTATGAAGCTGATT+AGG + chr8.2:7141780-7141799 MS.gene051825:CDS 35.0%
ATTGTACCTGGTGGAAATTT+AGG + chr8.2:7141926-7141945 MS.gene051825:CDS 35.0%
TGGTTGTATGAAGCTGATTA+GGG + chr8.2:7141781-7141800 MS.gene051825:CDS 35.0%
TGTATGGAGCAAAAAGGAAT+GGG + chr8.2:7141373-7141392 MS.gene051825:CDS 35.0%
TTGATTCAACCGGTATCAAA+TGG + chr8.2:7141725-7141744 MS.gene051825:CDS 35.0%
TTGTACCTGGTGGAAATTTA+GGG + chr8.2:7141927-7141946 MS.gene051825:CDS 35.0%
TTTGCTTCTGCTATTCAGAT+TGG + chr8.2:7142112-7142131 MS.gene051825:CDS 35.0%
! AGATTTTGCAGCAGTTTGAT+TGG + chr8.2:7141885-7141904 MS.gene051825:CDS 35.0%
! TTGAGATTTTATTCGCTGGT+AGG - chr8.2:7141697-7141716 None:intergenic 35.0%
AAGCGCTAACGATATCATCA+GGG - chr8.2:7141415-7141434 None:intergenic 40.0%
ACCAATGCACCATTTGATAC+CGG - chr8.2:7141737-7141756 None:intergenic 40.0%
ACTGGAAGCTTCAAAGATCT+TGG + chr8.2:7141530-7141549 MS.gene051825:CDS 40.0%
ATCCATCAATTCCTCTTCAC+TGG - chr8.2:7142203-7142222 None:intergenic 40.0%
GAATTCTGATGGGATTGTTG+AGG + chr8.2:7142174-7142193 MS.gene051825:CDS 40.0%
GTGTATGGAGCAAAAAGGAA+TGG + chr8.2:7141372-7141391 MS.gene051825:CDS 40.0%
TATTTGTCCTCATACTGGTG+TGG + chr8.2:7142255-7142274 MS.gene051825:CDS 40.0%
TGTAGGCATGAACGATCTTT+GGG + chr8.2:7141484-7141503 MS.gene051825:CDS 40.0%
TTCAGGTGTATGGAGCAAAA+AGG + chr8.2:7141367-7141386 MS.gene051825:CDS 40.0%
TTGTAGGCATGAACGATCTT+TGG + chr8.2:7141483-7141502 MS.gene051825:CDS 40.0%
! AAAGCGCTAACGATATCATC+AGG - chr8.2:7141416-7141435 None:intergenic 40.0%
! AATGACTGTGCTTGTTAGTC+AGG + chr8.2:7141553-7141572 MS.gene051825:CDS 40.0%
! AGAGGAATTGATGGATGCAA+TGG + chr8.2:7142207-7142226 MS.gene051825:CDS 40.0%
! ATATCATCAGGGTGGATTTC+TGG - chr8.2:7141404-7141423 None:intergenic 40.0%
! CTCAGGAATAATGGGGTTAT+TGG + chr8.2:7142298-7142317 MS.gene051825:CDS 40.0%
! GATATCGTTAGCGCTTTTGA+AGG + chr8.2:7141419-7141438 MS.gene051825:CDS 40.0%
! GATCTTTGGGTTAAACACTG+TGG + chr8.2:7141497-7141516 MS.gene051825:CDS 40.0%
! TGTTGATAAGATACCAAGGC+TGG + chr8.2:7142000-7142019 MS.gene051825:CDS 40.0%
!! CGTTTTGGCAAACAGTTTGT+AGG + chr8.2:7141467-7141486 MS.gene051825:intron 40.0%
!! GATCTTTGAAGCTTCCAGTA+TGG - chr8.2:7141529-7141548 None:intergenic 40.0%
!! GGCTTGTTGATAAGATACCA+AGG + chr8.2:7141996-7142015 MS.gene051825:CDS 40.0%
AAAATGAACCGTCCGTTGGT+CGG + chr8.2:7141590-7141609 MS.gene051825:CDS 45.0%
ACCGGTATCAAATGGTGCAT+TGG + chr8.2:7141733-7141752 MS.gene051825:CDS 45.0%
AGCCAGTGAAGAGGAATTGA+TGG + chr8.2:7142198-7142217 MS.gene051825:CDS 45.0%
CACTGTGGTAATAGCCATAC+TGG + chr8.2:7141512-7141531 MS.gene051825:CDS 45.0%
GCTGGTAGGAAAACAATCGA+AGG - chr8.2:7141683-7141702 None:intergenic 45.0%
GTGGTTGTTAGTACTGCTCA+TGG + chr8.2:7142337-7142356 MS.gene051825:CDS 45.0%
GTTAAAGCCACACCAGTATG+AGG - chr8.2:7142265-7142284 None:intergenic 45.0%
TGATTGGCAGGTACCTGATT+GGG + chr8.2:7141901-7141920 MS.gene051825:CDS 45.0%
TTAGTCAGGTAAATCGCCTC+CGG + chr8.2:7141567-7141586 MS.gene051825:CDS 45.0%
TTGATTGGCAGGTACCTGAT+TGG + chr8.2:7141900-7141919 MS.gene051825:CDS 45.0%
TTTGCAGCAGTTTGATTGGC+AGG + chr8.2:7141889-7141908 MS.gene051825:CDS 45.0%
! GCGGTTGAGATTTTATTCGC+TGG - chr8.2:7141701-7141720 None:intergenic 45.0%
!! ATGGCACTTGCTGATTCAAC+TGG + chr8.2:7142226-7142245 MS.gene051825:CDS 45.0%
!! CTTTTAGGGGCTGAACGTTT+TGG + chr8.2:7141452-7141471 MS.gene051825:intron 45.0%
AACAACCACAACCCTCTCAC+TGG - chr8.2:7142326-7142345 None:intergenic 50.0%
CCAGGTACAATCACCCAATC+AGG - chr8.2:7141917-7141936 None:intergenic 50.0%
CCTGATTGGGTGATTGTACC+TGG + chr8.2:7141914-7141933 MS.gene051825:CDS 50.0%
CGCTAACGATATCATCAGGG+TGG - chr8.2:7141412-7141431 None:intergenic 50.0%
CTCCATACACCTGAACCGTA+AGG - chr8.2:7141362-7141381 None:intergenic 50.0%
GATTGGGTGATTGTACCTGG+TGG + chr8.2:7141917-7141936 MS.gene051825:CDS 50.0%
GGTTATTGGAGCCAGTGAGA+GGG + chr8.2:7142312-7142331 MS.gene051825:CDS 50.0%
TCTGCTTATTGCGCTTCAGC+TGG + chr8.2:7141653-7141672 MS.gene051825:CDS 50.0%
TGCTTCCACCGGTGATACAT+CGG + chr8.2:7141622-7141641 MS.gene051825:CDS 50.0%
TGTTGAGGAAGCCAGTGAAG+AGG + chr8.2:7142189-7142208 MS.gene051825:CDS 50.0%
! AACCGCGCAGTTGATTCAAC+CGG + chr8.2:7141715-7141734 MS.gene051825:CDS 50.0%
! CCAACGGACGGTTCATTTTC+CGG - chr8.2:7141589-7141608 None:intergenic 50.0%
! TACCGGTTGAATCAACTGCG+CGG - chr8.2:7141720-7141739 None:intergenic 50.0%
!! CATCAGGGTGGATTTCTGGT+AGG - chr8.2:7141400-7141419 None:intergenic 50.0%
!! GGGAAAACCACTTGGCCTTA+CGG + chr8.2:7141344-7141363 MS.gene051825:CDS 50.0%
AACCAACTCCGACCAACGGA+CGG - chr8.2:7141601-7141620 None:intergenic 55.0%
ACCTGAACCGTAAGGCCAAG+TGG - chr8.2:7141354-7141373 None:intergenic 55.0%
CCGGAAAATGAACCGTCCGT+TGG + chr8.2:7141586-7141605 MS.gene051825:CDS 55.0%
GCACAACCAACTCCGACCAA+CGG - chr8.2:7141605-7141624 None:intergenic 55.0%
GCTTGTGCACAAACCAGCCT+TGG - chr8.2:7142016-7142035 None:intergenic 55.0%
GGCCTTACGGTTCAGGTGTA+TGG + chr8.2:7141357-7141376 MS.gene051825:CDS 55.0%
GGGTTATTGGAGCCAGTGAG+AGG + chr8.2:7142311-7142330 MS.gene051825:CDS 55.0%
! AACCTCTTCGACTCGCGTGT+GGG + chr8.2:7141323-7141342 MS.gene051825:CDS 55.0%
! ACGGACGGTTCATTTTCCGG+AGG - chr8.2:7141586-7141605 None:intergenic 55.0%
! GAAGCACTCGCGAAGTTCGA+CGG + chr8.2:7141287-7141306 MS.gene051825:CDS 55.0%
! GGAGTTGGTTGTGCTTCCAC+CGG + chr8.2:7141611-7141630 MS.gene051825:CDS 55.0%
!! ACCACTTGGCCTTACGGTTC+AGG + chr8.2:7141350-7141369 MS.gene051825:CDS 55.0%
AACCGTCCGTTGGTCGGAGT+TGG + chr8.2:7141596-7141615 MS.gene051825:CDS 60.0%
CAGCGCAGCCGATGTATCAC+CGG - chr8.2:7141633-7141652 None:intergenic 60.0%
CGCGTGTGGGGAAAACCACT+TGG + chr8.2:7141336-7141355 MS.gene051825:CDS 60.0%
TGGAGCCAGTGAGAGGGTTG+TGG + chr8.2:7142318-7142337 MS.gene051825:CDS 60.0%
! ACCTCTTCGACTCGCGTGTG+GGG + chr8.2:7141324-7141343 MS.gene051825:CDS 60.0%
! CAACCTCTTCGACTCGCGTG+TGG + chr8.2:7141322-7141341 MS.gene051825:CDS 60.0%
CGAAGTTCGACGGCGCGTAC+TGG + chr8.2:7141297-7141316 MS.gene051825:CDS 65.0%
CGCAGCCGATGTATCACCGG+TGG - chr8.2:7141630-7141649 None:intergenic 65.0%
TCCCCACACGCGAGTCGAAG+AGG - chr8.2:7141328-7141347 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 7141279 7142409 7141279 ID=MS.gene051825
chr8.2 mRNA 7141279 7142409 7141279 ID=MS.gene051825.t1;Parent=MS.gene051825
chr8.2 exon 7141279 7141440 7141279 ID=MS.gene051825.t1.exon1;Parent=MS.gene051825.t1
chr8.2 CDS 7141279 7141440 7141279 ID=cds.MS.gene051825.t1;Parent=MS.gene051825.t1
chr8.2 exon 7141482 7142409 7141482 ID=MS.gene051825.t1.exon2;Parent=MS.gene051825.t1
chr8.2 CDS 7141482 7142409 7141482 ID=cds.MS.gene051825.t1;Parent=MS.gene051825.t1
Gene Sequence

>MS.gene051825

ATGACATCGAAGCACTCGCGAAGTTCGACGGCGCGTACTGGCGCAACCTCTTCGACTCGCGTGTGGGGAAAACCACTTGGCCTTACGGTTCAGGTGTATGGAGCAAAAAGGAATGGGTCCTACCAGAAATCCACCCTGATGATATCGTTAGCGCTTTTGAAGGTAACTCTAATCTTTTAGGGGCTGAACGTTTTGGCAAACAGTTTGTAGGCATGAACGATCTTTGGGTTAAACACTGTGGTAATAGCCATACTGGAAGCTTCAAAGATCTTGGAATGACTGTGCTTGTTAGTCAGGTAAATCGCCTCCGGAAAATGAACCGTCCGTTGGTCGGAGTTGGTTGTGCTTCCACCGGTGATACATCGGCTGCGCTGTCTGCTTATTGCGCTTCAGCTGGAATTCCTTCGATTGTTTTCCTACCAGCGAATAAAATCTCAACCGCGCAGTTGATTCAACCGGTATCAAATGGTGCATTGGTGTTGAGTATTGATACTGATTTTGATGGTTGTATGAAGCTGATTAGGGAAATTACTTCTGAATTGCCGATATATTTGGCGAATTCCTTGAATAGTTTACGAATTGAAGGACAGAAAACTGCTGCTATTGAGATTTTGCAGCAGTTTGATTGGCAGGTACCTGATTGGGTGATTGTACCTGGTGGAAATTTAGGGAATATTTATGCATTTTACAAAGGTTTCAAAATGTGTAAAGATTTAGGGCTTGTTGATAAGATACCAAGGCTGGTTTGTGCACAAGCTGCAAATGCAAATCCTTTGTATTTGTATTATAAGAATGGTTGGAAAGAGTTTAAAGCGATTAAAGCGGAAACAACTTTTGCTTCTGCTATTCAGATTGGTGATCCTGTTTCAATTGATAGAGCTGTTTATGCATTGAAGAATTCTGATGGGATTGTTGAGGAAGCCAGTGAAGAGGAATTGATGGATGCAATGGCACTTGCTGATTCAACTGGAATGTTTATTTGTCCTCATACTGGTGTGGCTTTAACTGCTTTGATTAAACTCAGGAATAATGGGGTTATTGGAGCCAGTGAGAGGGTTGTGGTTGTTAGTACTGCTCATGGATTGAAATTTGCAGATAGTAAGATTGATTATCATTCTGGGAATATTGCTG
Protein sequence

>MS.gene051825.t1

MTSKHSRSSTARTGATSSTRVWGKPLGLTVQVYGAKRNGSYQKSTLMISLALLKFVGMNDLWVKHCGNSHTGSFKDLGMTVLVSQVNRLRKMNRPLVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISTAQLIQPVSNGALVLSIDTDFDGCMKLIREITSELPIYLANSLNSLRIEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCKDLGLVDKIPRLVCAQAANANPLYLYYKNGWKEFKAIKAETTFASAIQIGDPVSIDRAVYALKNSDGIVEEASEEELMDAMALADSTGMFICPHTGVALTALIKLRNNGVIGASERVVVVSTAHGLKFADSKIDYHSGNIA