AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051936

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051936.t1 MTR_2g100110 96.552 841 10 2 1 822 1 841 0.0 1679
MS.gene051936.t1 MTR_8g016230 84.211 836 117 1 2 822 3 838 0.0 1472
MS.gene051936.t1 MTR_2g100110 97.959 588 8 1 1 584 1 588 0.0 1195
MS.gene051936.t1 MTR_5g021190 62.874 835 290 4 4 821 6 837 0.0 1114
MS.gene051936.t1 MTR_2g039120 67.647 714 213 3 10 707 14 725 0.0 1032
MS.gene051936.t1 MTR_1g018200 68.511 705 203 4 20 707 27 729 0.0 1028
MS.gene051936.t1 MTR_2g039120 67.548 681 203 3 10 674 14 692 0.0 983
MS.gene051936.t1 MTR_1g023120 63.724 725 237 7 23 729 28 744 0.0 959
MS.gene051936.t1 MTR_3g112370 62.363 728 248 5 4 714 14 732 0.0 952
MS.gene051936.t1 MTR_2g094060 54.241 837 350 11 8 821 6 832 0.0 904
MS.gene051936.t1 MTR_2g039120 70.149 603 177 2 10 611 14 614 0.0 903
MS.gene051936.t1 MTR_1g023120 62.680 694 233 7 54 729 1 686 0.0 902
MS.gene051936.t1 MTR_2g094020 53.627 841 353 11 8 821 6 836 0.0 897
MS.gene051936.t1 MTR_4g059680 53.095 840 359 12 8 822 10 839 0.0 886
MS.gene051936.t1 MTR_2g094060 54.364 802 334 10 8 786 6 798 0.0 870
MS.gene051936.t1 MTR_2g039120 70.466 579 168 2 10 587 14 590 0.0 869
MS.gene051936.t1 MTR_8g085210 48.284 874 382 11 13 821 28 896 0.0 828
MS.gene051936.t1 MTR_2g094060 55.895 687 273 8 8 672 6 684 0.0 777
MS.gene051936.t1 MTR_3g096900 53.973 730 304 6 4 707 10 733 0.0 775
MS.gene051936.t1 MTR_2g042610 47.186 835 389 11 15 821 18 828 0.0 753
MS.gene051936.t1 MTR_3g096900 53.515 697 292 6 4 674 10 700 0.0 728
MS.gene051936.t1 MTR_5g024080 46.043 834 393 15 16 821 2 806 0.0 714
MS.gene051936.t1 MTR_5g025830 45.966 818 393 11 24 818 28 819 0.0 710
MS.gene051936.t1 MTR_3g117840 43.349 842 426 11 7 822 11 827 0.0 709
MS.gene051936.t1 MTR_4g073290 43.285 834 428 12 9 821 15 824 0.0 698
MS.gene051936.t1 MTR_3g005570 44.634 820 393 13 8 803 10 792 0.0 674
MS.gene051936.t1 MTR_3g096900 55.465 613 259 4 4 608 10 616 0.0 671
MS.gene051936.t1 MTR_3g088520 49.650 715 301 11 10 704 12 687 0.0 663
MS.gene051936.t1 MTR_3g096910 48.045 716 325 8 8 704 11 698 0.0 643
MS.gene051936.t1 MTR_3g088520 49.329 671 281 11 54 704 1 632 0.0 617
MS.gene051936.t1 MTR_3g096910 44.367 577 272 10 148 704 1 548 1.12e-151 456
MS.gene051936.t1 MTR_4g126330 41.247 417 131 8 279 679 131 449 3.28e-84 276
MS.gene051936.t1 MTR_4g126330 78.261 92 20 0 79 170 25 116 3.00e-44 166
MS.gene051936.t1 MTR_5g022590 41.765 340 156 9 43 380 11 310 7.90e-78 258
MS.gene051936.t1 MTR_5g022590 35.965 114 70 1 675 785 305 418 9.17e-14 74.7
MS.gene051936.t1 MTR_2g100000 31.768 362 207 9 34 366 64 414 2.03e-35 144
MS.gene051936.t1 MTR_6g007470 50.725 138 19 3 145 282 2 90 5.24e-29 116
MS.gene051936.t1 MTR_3g005610 30.573 314 168 10 432 725 26 309 3.55e-24 104
MS.gene051936.t1 MTR_2g059440 29.236 301 161 11 432 712 26 294 8.95e-20 91.3
MS.gene051936.t1 MTR_8g076800 82.353 51 9 0 145 195 9 59 2.46e-19 89.4
MS.gene051936.t1 MTR_4g126320 66.667 36 12 0 787 822 72 107 1.40e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051936.t1 AT3G13750 77.925 829 168 1 9 822 19 847 0.0 1375
MS.gene051936.t1 AT4G36360 61.679 822 296 4 17 821 26 845 0.0 1108
MS.gene051936.t1 AT4G36360 61.679 822 295 5 17 821 26 844 0.0 1103
MS.gene051936.t1 AT4G26140 69.832 716 197 5 8 707 13 725 0.0 1051
MS.gene051936.t1 AT4G26140 67.611 741 196 6 8 707 13 750 0.0 1036
MS.gene051936.t1 AT3G52840 66.480 716 220 6 8 707 67 778 0.0 1007
MS.gene051936.t1 AT3G52840 66.480 716 220 6 8 707 13 724 0.0 1006
MS.gene051936.t1 AT5G56870 67.318 716 213 6 8 707 13 723 0.0 996
MS.gene051936.t1 AT4G26140 67.514 708 186 6 8 674 13 717 0.0 987
MS.gene051936.t1 AT1G45130 64.552 725 231 7 8 710 12 732 0.0 974
MS.gene051936.t1 AT4G26140 71.736 605 167 4 8 611 13 614 0.0 912
MS.gene051936.t1 AT4G26140 72.231 605 162 5 8 611 13 612 0.0 911
MS.gene051936.t1 AT4G26140 72.231 605 162 5 8 611 13 612 0.0 911
MS.gene051936.t1 AT2G28470 53.717 834 350 11 18 822 26 852 0.0 909
MS.gene051936.t1 AT2G28470 53.717 834 350 11 18 822 20 846 0.0 909
MS.gene051936.t1 AT2G28470 53.717 834 350 11 18 822 26 852 0.0 909
MS.gene051936.t1 AT2G28470 53.717 834 350 11 18 822 20 846 0.0 909
MS.gene051936.t1 AT1G45130 63.256 645 214 6 85 710 13 653 0.0 854
MS.gene051936.t1 AT2G32810 49.143 875 382 13 2 822 12 877 0.0 838
MS.gene051936.t1 AT4G26140 72.344 546 147 4 8 552 13 555 0.0 828
MS.gene051936.t1 AT4G26140 69.352 571 146 5 8 552 13 580 0.0 815
MS.gene051936.t1 AT4G26140 69.352 571 146 5 8 552 13 580 0.0 815
MS.gene051936.t1 AT2G32810 49.820 833 355 13 2 780 12 835 0.0 806
MS.gene051936.t1 AT2G28470 56.094 681 267 7 18 672 26 700 0.0 789
MS.gene051936.t1 AT5G63810 51.719 727 328 4 8 712 16 741 0.0 771
MS.gene051936.t1 AT5G20710 46.961 839 394 14 8 821 14 826 0.0 749
MS.gene051936.t1 AT1G31740 46.498 828 379 13 7 821 3 779 0.0 729
MS.gene051936.t1 AT1G77410 45.789 843 397 14 6 822 7 815 0.0 724
MS.gene051936.t1 AT1G77410 45.519 848 397 15 6 822 7 820 0.0 717
MS.gene051936.t1 AT2G16730 43.030 825 419 15 23 821 43 842 0.0 655
MS.gene051936.t1 AT5G63800 49.000 700 309 9 24 704 32 702 0.0 642
MS.gene051936.t1 AT4G35010 41.807 830 422 17 23 821 40 839 0.0 639
MS.gene051936.t1 AT4G38590 41.846 791 413 13 54 821 1 767 0.0 617
MS.gene051936.t1 AT4G38590 41.258 795 416 14 50 821 65 831 0.0 603
MS.gene051936.t1 AT1G77410 44.552 725 342 15 124 822 19 709 0.0 583
MS.gene051936.t1 AT1G77410 44.552 725 342 15 124 822 19 709 0.0 583
MS.gene051936.t1 AT5G20710 42.016 645 325 13 202 821 1 621 5.53e-165 493
MS.gene051936.t1 AT2G04060 35.694 353 168 8 289 641 23 316 1.71e-53 193
MS.gene051936.t1 AT1G72990 36.982 338 163 13 34 337 18 339 1.03e-46 177
MS.gene051936.t1 AT1G72990 36.982 338 163 13 34 337 73 394 2.41e-46 177
MS.gene051936.t1 AT1G72990 36.982 338 163 13 34 337 73 394 2.41e-46 177
MS.gene051936.t1 AT1G72990 35.780 327 160 13 45 337 22 332 2.42e-41 161
MS.gene051936.t1 AT2G04062 43.023 172 77 2 24 195 7 157 3.08e-37 137
MS.gene051936.t1 AT3G53080 38.095 84 50 2 740 822 71 153 5.22e-14 70.9
MS.gene051936.t1 AT3G53075 35.955 89 55 2 735 822 76 163 9.02e-11 61.6

Find 209 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTAGCATGTTCTCTTAT+TGG 0.082868 2.2:+2991555 MS.gene051936:CDS
TTTGGTTTGTAATCCTTATT+TGG 0.159217 2.2:-2992888 None:intergenic
TCTGAACCGGCTTTAATTTC+TGG 0.172970 2.2:+2993492 MS.gene051936:CDS
ACTGAAAATATTACCTTAAA+TGG 0.184873 2.2:-2992291 None:intergenic
AACTGACAATGATCCATTTA+AGG 0.186889 2.2:+2992278 MS.gene051936:CDS
CTTGGCCCGATTACATTAAA+TGG 0.188773 2.2:+2995005 MS.gene051936:CDS
GATCCTTCTTTGTCCATTAA+TGG 0.198924 2.2:-2991619 None:intergenic
TCTACCTGAGACATAATTAT+TGG 0.206709 2.2:-2992491 None:intergenic
GTTTGTGCTGAGTGGAATTT+TGG 0.211328 2.2:+2992115 MS.gene051936:CDS
ATGTAGATTGAAAATGAATA+TGG 0.212289 2.2:+2992599 MS.gene051936:intron
GATTGCTACGGCAACCAAAA+TGG 0.213807 2.2:+2993433 MS.gene051936:CDS
TATCATGGAGGAACAAATTT+TGG 0.217874 2.2:+2993249 MS.gene051936:CDS
GATACCAACTGGAAATTTAT+TGG 0.218053 2.2:+2995593 MS.gene051936:CDS
TGCTTTAGACATGGGAAGTA+TGG 0.233821 2.2:+2995310 MS.gene051936:CDS
GCTACTGTTGCATAAGCTTT+TGG 0.236595 2.2:-2993702 None:intergenic
TCCTTCAGATGACCCCATTT+TGG 0.237236 2.2:-2993447 None:intergenic
CAAGCTTCTGTCCACATCTT+TGG 0.242648 2.2:-2992906 None:intergenic
CAGGTAAATCCTACACTAAA+TGG 0.247949 2.2:+2992648 MS.gene051936:CDS
TGATTATTTCTCTCCAAATA+AGG 0.248287 2.2:+2992875 MS.gene051936:CDS
CAAAGAAGGATCCTCATTTC+TGG 0.251203 2.2:+2991630 MS.gene051936:CDS
TCTAAAGCTATCACCATTAA+TGG 0.257290 2.2:+2991606 MS.gene051936:CDS
ATCTGATAACTTATAAGATT+TGG 0.262548 2.2:-2995708 None:intergenic
GGAGCTTGTGCTGCATTTCT+TGG 0.279746 2.2:+2993669 MS.gene051936:CDS
GACAGAATCTTGGCCGTTAC+TGG 0.287159 2.2:+2995357 MS.gene051936:CDS
ATTGGTTGTGTTTGAAGAAT+TGG 0.289834 2.2:+2995611 MS.gene051936:CDS
TCGAGACCATTTAATGTAAT+CGG 0.293848 2.2:-2995011 None:intergenic
CACTAAATGGGCAGCAGATA+TGG 0.301029 2.2:+2992661 MS.gene051936:CDS
TTCCTCGGTCGAGTGGGTTC+AGG 0.307536 2.2:+2995211 MS.gene051936:CDS
GCTTATGCAACAGTAGCTTT+TGG 0.311576 2.2:+2993708 MS.gene051936:CDS
CCACAAGATAAATGTGCTTT+TGG 0.318440 2.2:-2995765 None:intergenic
AAAGGACAAGTGTGGTTAAA+TGG 0.318838 2.2:+2995335 MS.gene051936:CDS
CAGGTATGAGCTTCACATTT+TGG 0.322652 2.2:-2994735 None:intergenic
GAGACTTTCTTCAAGACATT+TGG 0.330421 2.2:-2996263 None:intergenic
CTGGTCTTTATGTTCATCTA+AGG 0.337463 2.2:+2992080 MS.gene051936:CDS
GTTTGCAGGTTTACGGAGTT+TGG 0.340398 2.2:+2993044 MS.gene051936:intron
ACATGGAATGCTGGTGTTCT+TGG 0.357372 2.2:+2994987 MS.gene051936:CDS
GGTACCATGTTCCTCATTCA+TGG 0.357838 2.2:+2995568 MS.gene051936:intron
ACTTCTCAGAAATCCTTCAT+TGG 0.358344 2.2:-2994351 None:intergenic
AATACCTCAGGAGTGCTTCT+TGG 0.360089 2.2:-2991666 None:intergenic
GATGCACCTCTTGATGAATA+TGG 0.363756 2.2:+2993315 MS.gene051936:CDS
AGACAGGCTATTTGAATCTC+AGG 0.368202 2.2:+2992463 MS.gene051936:CDS
GTTTGGTTGAAGTACATTCC+TGG 0.369390 2.2:+2992243 MS.gene051936:CDS
CTATTCACGGTGGACTATCT+TGG 0.380755 2.2:+2994101 MS.gene051936:CDS
TGCATTACAACTTGCCTCCT+TGG 0.383676 2.2:+2993736 MS.gene051936:CDS
ATTGCTACGGCAACCAAAAT+GGG 0.389460 2.2:+2993434 MS.gene051936:CDS
TTGGTTGTGTTTGAAGAATT+GGG 0.390742 2.2:+2995612 MS.gene051936:CDS
ACTGTGTCACCTGAAAATTT+TGG 0.396444 2.2:+2996227 MS.gene051936:CDS
GAAAGCTAAGGAAGGAGGTT+TGG 0.400481 2.2:+2991830 MS.gene051936:CDS
GGACCTATGGAGTATGAAAT+TGG 0.404072 2.2:+2992620 MS.gene051936:CDS
TCGATCAAATTCGCTAGCTT+TGG 0.406768 2.2:+2995807 MS.gene051936:CDS
AGTTATCAGATGCAAACTTC+TGG 0.407166 2.2:+2995720 MS.gene051936:CDS
CAAGATAGTCCACCGTGAAT+AGG 0.413215 2.2:-2994100 None:intergenic
CTTTATGTTCATCTAAGGAT+TGG 0.414439 2.2:+2992085 MS.gene051936:CDS
TTAGCTTTCTGTATAAGATC+TGG 0.418138 2.2:-2991816 None:intergenic
GTTCTTACAGTGTTATCTGC+AGG 0.421154 2.2:+2994386 MS.gene051936:CDS
CTTCTCAGAAATCCTTCATT+GGG 0.424686 2.2:-2994350 None:intergenic
GTGGAAGGTTCCATCATCAT+TGG 0.435542 2.2:+2991527 MS.gene051936:CDS
TTTATTTAGGTTGGTCTCCA+TGG 0.437798 2.2:+2995155 MS.gene051936:intron
CATTTAGTGTAGGATTTACC+TGG 0.437828 2.2:-2992647 None:intergenic
GAACACGAGTCATCTTCATC+TGG 0.442908 2.2:-2994078 None:intergenic
TTCTCTCGGTGGAAGTTCCT+CGG 0.444564 2.2:+2995196 MS.gene051936:CDS
GTTATTATTATTACTTTGCC+AGG 0.444713 2.2:-2991897 None:intergenic
GCATTCCATGTTTCAAAATG+AGG 0.445741 2.2:-2994975 None:intergenic
AGCAATAAAACTCTCTGAAC+CGG 0.448263 2.2:+2993479 MS.gene051936:CDS
CATTCATGGCTGATACCAAC+TGG 0.453589 2.2:+2995582 MS.gene051936:CDS
CACCCTTGCAGTGTTATAAA+CGG 0.454278 2.2:-2993790 None:intergenic
TCCTCGGTCGAGTGGGTTCA+GGG 0.456499 2.2:+2995212 MS.gene051936:CDS
ATGGTCTCGATGAAGGTAGA+AGG 0.457897 2.2:+2995024 MS.gene051936:CDS
TAAACGGTGTTCTTGCAGTC+AGG 0.459415 2.2:-2993774 None:intergenic
GCCTTGAGTCTTCATTCTCT+CGG 0.459507 2.2:+2995182 MS.gene051936:CDS
AACTGAAAATGCCATGTCTT+CGG 0.461960 2.2:-2993090 None:intergenic
GTTTACGGAGTTTGGAGGTC+CGG 0.462157 2.2:+2993052 MS.gene051936:CDS
GGAATGTACTTCAACCAAAC+AGG 0.469362 2.2:-2992240 None:intergenic
GCACATTTATCTTGTGGCCC+TGG 0.470883 2.2:+2995771 MS.gene051936:CDS
TTGAAATGATCAGGTACAAA+TGG 0.471373 2.2:-2996294 None:intergenic
AAGTGTTGCAGTTGGACTCC+CGG 0.472133 2.2:+2994780 MS.gene051936:CDS
GCAGATATGGCTGTAGGACT+TGG 0.475319 2.2:+2992674 MS.gene051936:CDS
TGGTCCAATAATTATGTCTC+AGG 0.477103 2.2:+2992487 MS.gene051936:CDS
TGGCCTGCTTATAAAGCGTC+CGG 0.479606 2.2:+2995377 MS.gene051936:CDS
ATCACAATAGAAGCCATTGC+AGG 0.479843 2.2:-2992856 None:intergenic
GTCTTACAATACCTTTGAAA+AGG 0.480418 2.2:+2995884 MS.gene051936:CDS
TGGTTAAATGGACAGAATCT+TGG 0.481305 2.2:+2995347 MS.gene051936:CDS
CAAAGATGTGGACAGAAGCT+TGG 0.481859 2.2:+2992907 MS.gene051936:CDS
AAGGTAGAAGGGACCTGTCT+TGG 0.482087 2.2:+2995036 MS.gene051936:CDS
TTCCACTCAGCACAAACATA+AGG 0.488437 2.2:-2992109 None:intergenic
TGTGGAGTACCACAAGTAAT+CGG 0.489635 2.2:-2994215 None:intergenic
GCAGATAACACTGTAAGAAC+AGG 0.491038 2.2:-2994383 None:intergenic
CGAGACCATTTAATGTAATC+GGG 0.491861 2.2:-2995010 None:intergenic
GTTGCAAGATTTATACAGAA+AGG 0.492357 2.2:+2993110 MS.gene051936:CDS
TGAAAATGAATATGGACCTA+TGG 0.492558 2.2:+2992607 MS.gene051936:CDS
AGGTAAATCCTACACTAAAT+GGG 0.494074 2.2:+2992649 MS.gene051936:CDS
GCTGAACTTACAACAGGATC+AGG 0.496896 2.2:-2992737 None:intergenic
GCTTTAGACATGGGAAGTAT+GGG 0.497936 2.2:+2995311 MS.gene051936:CDS
TCGGCAGGTCGGTGAGGTAC+CGG 0.502753 2.2:-2993071 None:intergenic
TTCGTCAATAGTCAGCTGTC+AGG 0.502839 2.2:+2994425 MS.gene051936:CDS
GTCCCGGACGCTTTATAAGC+AGG 0.508646 2.2:-2995380 None:intergenic
TTCTTACAGTGTTATCTGCA+GGG 0.511747 2.2:+2994387 MS.gene051936:CDS
ATCATTTATCAATTATTACA+TGG 0.512390 2.2:+2993136 MS.gene051936:CDS
TTTGGTGAAGTTCATAAAGT+TGG 0.514157 2.2:+2992048 MS.gene051936:CDS
ACCAAAATGGGGTCATCTGA+AGG 0.518131 2.2:+2993446 MS.gene051936:CDS
AGTGCTTCTTGGATAATGAA+TGG 0.519114 2.2:-2991655 None:intergenic
ATAGTTTCCGATCCGTGTAA+TGG 0.519802 2.2:-2993523 None:intergenic
TTGGCAGACATGGTCTTACA+AGG 0.520025 2.2:+2995055 MS.gene051936:CDS
GAATTGGGCGGTGACCCTAA+TGG 0.520205 2.2:+2995627 MS.gene051936:CDS
ATGACTCGTGTTCCTATTCA+CGG 0.520311 2.2:+2994088 MS.gene051936:CDS
GACATGGGAAGTATGGGAAA+AGG 0.521616 2.2:+2995317 MS.gene051936:CDS
ATTATTACTTTGCCAGGTGA+AGG 0.522232 2.2:-2991891 None:intergenic
AATGAAGGATTTCTGAGAAG+TGG 0.525796 2.2:+2994353 MS.gene051936:CDS
AAGTTTCCACAAGATCCTAC+TGG 0.526632 2.2:-2995834 None:intergenic
GTGGCGAGGCTTCTCAAAGA+TGG 0.529015 2.2:+2995459 MS.gene051936:CDS
AGCAGAAGAACCAATGATGA+TGG 0.529803 2.2:-2991537 None:intergenic
GGACAGAAGCTTGGACTGGC+TGG 0.530087 2.2:+2992916 MS.gene051936:CDS
GGTACTCCAGTAGGATCTTG+TGG 0.530178 2.2:+2995828 MS.gene051936:CDS
GAGTATGAAATTGGTGCTCC+AGG 0.530719 2.2:+2992629 MS.gene051936:CDS
ACATTAAATGGTCTCGATGA+AGG 0.531878 2.2:+2995017 MS.gene051936:CDS
CATGTGTTTAAATCGAAGTC+GGG 0.531921 2.2:+2993648 MS.gene051936:CDS
GTCCTTATGTTTGTGCTGAG+TGG 0.532594 2.2:+2992107 MS.gene051936:CDS
TGCAGGTTTACGGAGTTTGG+AGG 0.532601 2.2:+2993047 MS.gene051936:intron
CAAAATGTGAAGCTCATACC+TGG 0.534579 2.2:+2994736 MS.gene051936:CDS
GAAAATGCCATGTCTTCGGC+AGG 0.539055 2.2:-2993086 None:intergenic
CTGCTCTAGTAGACCGGTCA+TGG 0.539262 2.2:-2994170 None:intergenic
CTTCAAGTTCATAATGTGGA+AGG 0.540664 2.2:+2991512 None:intergenic
TGTTTACCATATTCATCAAG+AGG 0.544097 2.2:-2993321 None:intergenic
CTTTATAAGCAGGCCAGTAA+CGG 0.545557 2.2:-2995370 None:intergenic
GGGACCTGTCTTGGCAGACA+TGG 0.549363 2.2:+2995045 MS.gene051936:CDS
GTGGAAGTTCCTCGGTCGAG+TGG 0.550654 2.2:+2995204 MS.gene051936:CDS
CATTCCATGTTTCAAAATGA+GGG 0.550777 2.2:-2994974 None:intergenic
TCTCTTCTAAGTGTTGCAGT+TGG 0.551688 2.2:+2994772 MS.gene051936:CDS
GATAGTTCATTCACCATGAC+CGG 0.554175 2.2:+2994157 MS.gene051936:CDS
TCTTGTGGAAACTTTCATGA+AGG 0.554418 2.2:+2995843 MS.gene051936:CDS
AAGACCATGTCTGCCAAGAC+AGG 0.554988 2.2:-2995049 None:intergenic
CTTCCCATGTCTAAAGCAAA+CGG 0.559247 2.2:-2995305 None:intergenic
TGGAAGTTCCTCGGTCGAGT+GGG 0.563498 2.2:+2995205 MS.gene051936:CDS
GCTAGCTTTGGTACTCCAGT+AGG 0.567006 2.2:+2995819 MS.gene051936:CDS
TTGTTGTTTCAGAATTGTGT+TGG 0.567563 2.2:+2996185 MS.gene051936:intron
GAGATTTAACCGATTACTTG+TGG 0.569217 2.2:+2994206 MS.gene051936:CDS
ATAAAGTTGGTGCAGCAAGC+TGG 0.570622 2.2:+2992061 MS.gene051936:CDS
CCAAAAGCACATTTATCTTG+TGG 0.571229 2.2:+2995765 MS.gene051936:CDS
TCATGTGTTTAAATCGAAGT+CGG 0.572762 2.2:+2993647 MS.gene051936:CDS
GTTTAACTGCTCTAGTAGAC+CGG 0.575697 2.2:-2994176 None:intergenic
TCACCGACCTGCCGAAGACA+TGG 0.575969 2.2:+2993079 MS.gene051936:CDS
TCATAGCTTGTAGCAATGAA+AGG 0.576212 2.2:-2993288 None:intergenic
TGCACCGTTTGCTTTAGACA+TGG 0.576992 2.2:+2995301 MS.gene051936:CDS
TCCTGTGTACAGGATTGCTA+CGG 0.577884 2.2:+2993421 MS.gene051936:intron
TTGATATGATGAAAGCAGAC+AGG 0.577949 2.2:+2992447 MS.gene051936:CDS
ACAACCAATAAATTTCCAGT+TGG 0.578032 2.2:-2995597 None:intergenic
GTTGTGATTGATCCCAATGA+AGG 0.582958 2.2:+2994338 MS.gene051936:CDS
GATCCTACCATTACACGGAT+CGG 0.585240 2.2:+2993516 MS.gene051936:CDS
TCACCATTAATGGACAAAGA+AGG 0.585727 2.2:+2991616 MS.gene051936:CDS
TGCGTAGTCACAGTTATCAC+AGG 0.585886 2.2:-2995402 None:intergenic
GGCCTGCTTATAAAGCGTCC+GGG 0.586163 2.2:+2995378 MS.gene051936:CDS
AATGGACATGAACCTTCACC+TGG 0.589322 2.2:+2991879 MS.gene051936:CDS
ACACCGTTTATAACACTGCA+AGG 0.590454 2.2:+2993787 MS.gene051936:CDS
GTACAGATTAACACCTGCAA+TGG 0.591387 2.2:+2992843 MS.gene051936:intron
GCACATGATCCACGGAACTC+CGG 0.591942 2.2:-2992699 None:intergenic
GCACCAATTTCATACTCCAT+AGG 0.593297 2.2:-2992623 None:intergenic
TTTGGCTAAAAGTTAGCTTG+GGG 0.594034 2.2:-2994717 None:intergenic
CTGGAGATCCTACCATTACA+CGG 0.599160 2.2:+2993511 MS.gene051936:CDS
AGGATTTCTGAGAAGTGGAA+AGG 0.600566 2.2:+2994358 MS.gene051936:CDS
GACAGGCTATTTGAATCTCA+GGG 0.601333 2.2:+2992464 MS.gene051936:CDS
AGATCTTATACAGAAAGCTA+AGG 0.602448 2.2:+2991818 MS.gene051936:CDS
GTTACTGTAACACAGAATGT+TGG 0.602653 2.2:+2994951 MS.gene051936:intron
AACACGAGTCATCTTCATCT+GGG 0.604554 2.2:-2994077 None:intergenic
ATGTGGACAGAAGCTTGGAC+TGG 0.605181 2.2:+2992912 MS.gene051936:CDS
GCACCGTTTGCTTTAGACAT+GGG 0.605886 2.2:+2995302 MS.gene051936:CDS
AATGAATGGATCCAGAAATG+AGG 0.605975 2.2:-2991641 None:intergenic
ACCGAGAGAATGAAGACTCA+AGG 0.605997 2.2:-2995183 None:intergenic
CTTATACAGAAAGCTAAGGA+AGG 0.606000 2.2:+2991822 MS.gene051936:CDS
TGGTCTCGATGAAGGTAGAA+GGG 0.607950 2.2:+2995025 MS.gene051936:CDS
TTCTTCAAGACATTTGGACA+TGG 0.608848 2.2:-2996257 None:intergenic
AGGATTACAAACCAAAGATG+TGG 0.608975 2.2:+2992895 MS.gene051936:CDS
GTCACAGTTATCACAGGTCC+CGG 0.609764 2.2:-2995396 None:intergenic
ATACAGAAAGCTAAGGAAGG+AGG 0.610912 2.2:+2991825 MS.gene051936:CDS
ATCTGCTGCCCATTTAGTGT+AGG 0.611477 2.2:-2992657 None:intergenic
GTTGGTATCAGCCATGAATG+AGG 0.611609 2.2:-2995579 None:intergenic
CTTGAAGAAAGTCTCGGTCG+AGG 0.612254 2.2:+2996271 MS.gene051936:CDS
TCTTGCTTGCACATGATCCA+CGG 0.613454 2.2:-2992707 None:intergenic
CCCCTGAACCCACTCGACCG+AGG 0.614563 2.2:-2995213 None:intergenic
GGATCTCCAGAAATTAAAGC+CGG 0.615458 2.2:-2993498 None:intergenic
TTTCCGATCCGTGTAATGGT+AGG 0.617396 2.2:-2993519 None:intergenic
GCAAGATTTATACAGAAAGG+AGG 0.618225 2.2:+2993113 MS.gene051936:CDS
TGGGCAGCAGATATGGCTGT+AGG 0.619879 2.2:+2992668 MS.gene051936:CDS
TTGAGTCTTCATTCTCTCGG+TGG 0.621166 2.2:+2995185 MS.gene051936:CDS
AAATGTCTTGAAGAAAGTCT+CGG 0.621445 2.2:+2996265 MS.gene051936:CDS
CCTCGGTCGAGTGGGTTCAG+GGG 0.627821 2.2:+2995213 MS.gene051936:CDS
GAATGAACTATCATCAGTAG+AGG 0.630435 2.2:-2994146 None:intergenic
ATGGCTGTAGGACTTGGTAC+CGG 0.637207 2.2:+2992680 MS.gene051936:CDS
ATGTCTTCGGCAGGTCGGTG+AGG 0.645166 2.2:-2993077 None:intergenic
TCAGTTCTAAAACTGATACC+AGG 0.645739 2.2:-2992261 None:intergenic
TGTGATAACTGTGACTACGC+AGG 0.651220 2.2:+2995404 MS.gene051936:CDS
GACTTGGTACCGGAGTTCCG+TGG 0.652078 2.2:+2992690 MS.gene051936:CDS
ATGCCATGTCTTCGGCAGGT+CGG 0.653584 2.2:-2993082 None:intergenic
GGAAGAATGCTTATAGACCA+AGG 0.658066 2.2:-2993753 None:intergenic
ATGTAGAAGTAACTGTGGCG+AGG 0.658652 2.2:+2995445 MS.gene051936:CDS
AATAAATGTAGAAGTAACTG+TGG 0.658775 2.2:+2995440 MS.gene051936:CDS
GTATGGGAAAAGGACAAGTG+TGG 0.663046 2.2:+2995327 MS.gene051936:CDS
CACCGTTTATAACACTGCAA+GGG 0.667596 2.2:+2993788 MS.gene051936:CDS
TTATCCAAGAAGCACTCCTG+AGG 0.679239 2.2:+2991662 MS.gene051936:CDS
TTGCTACGGCAACCAAAATG+GGG 0.680712 2.2:+2993435 MS.gene051936:CDS
GAAGACTCAAGGCTTCACCA+TGG 0.682047 2.2:-2995172 None:intergenic
TGTTCATTTCAGTATCATGG+AGG 0.682153 2.2:+2993237 MS.gene051936:intron
TGTTGGACAGAACTCATGCA+AGG 0.683554 2.2:+2996202 MS.gene051936:CDS
ACGGATCGGAAACTATCAAG+AGG 0.690937 2.2:+2993530 MS.gene051936:CDS
TCAGCCATGAATGAGGAACA+TGG 0.708195 2.2:-2995572 None:intergenic
TATGTGCAGATATTTATGAG+TGG 0.736896 2.2:+2995682 MS.gene051936:CDS
ACTCGTGTTCCTATTCACGG+TGG 0.752987 2.2:+2994091 MS.gene051936:CDS
AGGCTATTTGAATCTCAGGG+TGG 0.765466 2.2:+2992467 MS.gene051936:CDS
GTTGTGTTTGAAGAATTGGG+CGG 0.788119 2.2:+2995615 MS.gene051936:CDS
AGAATGCTTATAGACCAAGG+AGG 0.819272 2.2:-2993750 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTACTGTTTTATTT+AGG + chr2.2:2995142-2995161 MS.gene051936:intron 10.0%
!!! TTTTTTTATTTGAATAAGAA+AGG - chr2.2:2994598-2994617 None:intergenic 10.0%
!! AAAAACAAAAACTAATTAGA+AGG - chr2.2:2992377-2992396 None:intergenic 15.0%
!! AAAATATGTATAGTTCTTAT+TGG - chr2.2:2993372-2993391 None:intergenic 15.0%
!! ATATTATATAATAATACCTC+AGG - chr2.2:2991681-2991700 None:intergenic 15.0%
!! ATCATTTATCAATTATTACA+TGG + chr2.2:2993136-2993155 MS.gene051936:CDS 15.0%
!! TTGAAGTAAAATAGTTTATT+CGG - chr2.2:2994627-2994646 None:intergenic 15.0%
!!! AAAATTTCATTATTTTCCTT+CGG - chr2.2:2993927-2993946 None:intergenic 15.0%
!!! AGATTTTGGAATTTTAATTT+TGG - chr2.2:2994033-2994052 None:intergenic 15.0%
!!! ATATTTTATACACTTAAGTA+GGG + chr2.2:2993385-2993404 MS.gene051936:intron 15.0%
!!! ATTTGCTTAATTGATTTTTA+GGG + chr2.2:2992212-2992231 MS.gene051936:intron 15.0%
!! ACTGAAAATATTACCTTAAA+TGG - chr2.2:2992294-2992313 None:intergenic 20.0%
!! ACTGAAATGAACAAAATAAT+GGG - chr2.2:2993230-2993249 None:intergenic 20.0%
!! ATCTGATAACTTATAAGATT+TGG - chr2.2:2995711-2995730 None:intergenic 20.0%
!! ATGTAGATTGAAAATGAATA+TGG + chr2.2:2992599-2992618 MS.gene051936:intron 20.0%
!! TAACTAAAAAGATTCCATTA+GGG - chr2.2:2995644-2995663 None:intergenic 20.0%
!! TACTGAAATGAACAAAATAA+TGG - chr2.2:2993231-2993250 None:intergenic 20.0%
!! TTGATAAACTAATCACTAAA+TGG + chr2.2:2995537-2995556 MS.gene051936:intron 20.0%
!!! AAAACAATGTCTTTTAGTTT+TGG + chr2.2:2991931-2991950 MS.gene051936:intron 20.0%
!!! AATATTTTTGCCAAAAAGAT+AGG - chr2.2:2992160-2992179 None:intergenic 20.0%
!!! AATTACTGTTTTATTTAGGT+TGG + chr2.2:2995146-2995165 MS.gene051936:intron 20.0%
!!! CATATTTTATACACTTAAGT+AGG + chr2.2:2993384-2993403 MS.gene051936:intron 20.0%
!!! GATTTGCTTAATTGATTTTT+AGG + chr2.2:2992211-2992230 MS.gene051936:intron 20.0%
!!! GCTCTAAAATAAAATCTTTT+AGG + chr2.2:2996085-2996104 MS.gene051936:intron 20.0%
!!! TTTGCTTAATTGATTTTTAG+GGG + chr2.2:2992213-2992232 MS.gene051936:intron 20.0%
!!! TTTTATTTACATGATCTTGT+TGG + chr2.2:2993960-2993979 MS.gene051936:intron 20.0%
! AAATTCCAAAATCTCTTTAC+AGG + chr2.2:2994039-2994058 MS.gene051936:intron 25.0%
! AAGTGACAATCAAATACAAA+TGG - chr2.2:2996137-2996156 None:intergenic 25.0%
! AATAAATGTAGAAGTAACTG+TGG + chr2.2:2995440-2995459 MS.gene051936:CDS 25.0%
! AATCACTAAATGGTAATTTC+AGG + chr2.2:2995547-2995566 MS.gene051936:intron 25.0%
! AATGATCTGACAATTATGAT+CGG - chr2.2:2996013-2996032 None:intergenic 25.0%
! AGTTCATGATTCAGATAAAT+CGG - chr2.2:2994880-2994899 None:intergenic 25.0%
! ATATATAGTTCCTGATCAAA+AGG - chr2.2:2994683-2994702 None:intergenic 25.0%
! CCAAGTTCAATACTAAAAAA+TGG - chr2.2:2993207-2993226 None:intergenic 25.0%
! CTAACTAAAAAGATTCCATT+AGG - chr2.2:2995645-2995664 None:intergenic 25.0%
! GTTATTATTATTACTTTGCC+AGG - chr2.2:2991900-2991919 None:intergenic 25.0%
! TACTTGGAATGAATATATCT+AGG + chr2.2:2994532-2994551 MS.gene051936:intron 25.0%
! TGATACATAGTAACAATACT+TGG + chr2.2:2994516-2994535 MS.gene051936:intron 25.0%
! TTGCATTTATCTCATTCTTA+TGG - chr2.2:2992974-2992993 None:intergenic 25.0%
!! AAGGTACTAATCAATGAAAA+GGG - chr2.2:2992358-2992377 None:intergenic 25.0%
!! TGAAACAACAAAATCACTTT+TGG - chr2.2:2996176-2996195 None:intergenic 25.0%
!! TGATTATTTCTCTCCAAATA+AGG + chr2.2:2992875-2992894 MS.gene051936:CDS 25.0%
!! TGTGATTTGTATAACTAAGT+TGG + chr2.2:2991766-2991785 MS.gene051936:intron 25.0%
!! TTGCATTTGAAACTTCATTA+TGG - chr2.2:2992408-2992427 None:intergenic 25.0%
!! TTTGTTCATATTTTCAGATG+TGG + chr2.2:2991793-2991812 MS.gene051936:intron 25.0%
!! TTTTGATCAGGAACTATATA+TGG + chr2.2:2994682-2994701 MS.gene051936:intron 25.0%
!! TTTTGTTCATTTCAGTATCA+TGG + chr2.2:2993234-2993253 MS.gene051936:intron 25.0%
!!! ATGAATTTTTGAGCAAAATC+AGG - chr2.2:2995123-2995142 None:intergenic 25.0%
!!! ATGGAATCTTTTTAGTTAGA+AGG + chr2.2:2995646-2995665 MS.gene051936:CDS 25.0%
!!! CCATTTTTTAGTATTGAACT+TGG + chr2.2:2993204-2993223 MS.gene051936:intron 25.0%
!!! TATAGTCTTATTTAGCAAAG+TGG + chr2.2:2993893-2993912 MS.gene051936:intron 25.0%
!!! TGATTCAGACTTATGTTTTT+TGG + chr2.2:2991856-2991875 MS.gene051936:CDS 25.0%
!!! TGGAATCTTTTTAGTTAGAA+GGG + chr2.2:2995647-2995666 MS.gene051936:CDS 25.0%
!!! TGTTACAAAGCATTTTAGAT+AGG - chr2.2:2993590-2993609 None:intergenic 25.0%
!!! TTGGTGTAGTATTATTTTGA+GGG + chr2.2:2992016-2992035 MS.gene051936:intron 25.0%
!!! TTTGGTGTAGTATTATTTTG+AGG + chr2.2:2992015-2992034 MS.gene051936:intron 25.0%
!!! TTTGGTTTGTAATCCTTATT+TGG - chr2.2:2992891-2992910 None:intergenic 25.0%
AAATGTCTTGAAGAAAGTCT+CGG + chr2.2:2996265-2996284 MS.gene051936:CDS 30.0%
AAATTTGATGTATGCTCTTG+AGG + chr2.2:2994490-2994509 MS.gene051936:intron 30.0%
AACCTAAGAAATAAGAAGCA+AGG - chr2.2:2992950-2992969 None:intergenic 30.0%
AACTGACAATGATCCATTTA+AGG + chr2.2:2992278-2992297 MS.gene051936:CDS 30.0%
ACAACCAATAAATTTCCAGT+TGG - chr2.2:2995600-2995619 None:intergenic 30.0%
AGAATCTTTAACAGTGCTTA+AGG - chr2.2:2992327-2992346 None:intergenic 30.0%
AGATCTTATACAGAAAGCTA+AGG + chr2.2:2991818-2991837 MS.gene051936:CDS 30.0%
AGGTAAATCCTACACTAAAT+GGG + chr2.2:2992649-2992668 MS.gene051936:CDS 30.0%
ATCTTTAATCATTACTGTGC+AGG + chr2.2:2993623-2993642 MS.gene051936:intron 30.0%
ATTGGTTGTGTTTGAAGAAT+TGG + chr2.2:2995611-2995630 MS.gene051936:CDS 30.0%
CATTCCATGTTTCAAAATGA+GGG - chr2.2:2994977-2994996 None:intergenic 30.0%
CTTTATGTTCATCTAAGGAT+TGG + chr2.2:2992085-2992104 MS.gene051936:CDS 30.0%
GATACCAACTGGAAATTTAT+TGG + chr2.2:2995593-2995612 MS.gene051936:CDS 30.0%
GATGAATATGGTAAACACAA+AGG + chr2.2:2993327-2993346 MS.gene051936:intron 30.0%
GTTGCAAGATTTATACAGAA+AGG + chr2.2:2993110-2993129 MS.gene051936:CDS 30.0%
TAAACCTGCAAACATAAAAG+AGG - chr2.2:2993037-2993056 None:intergenic 30.0%
TATGTGCAGATATTTATGAG+TGG + chr2.2:2995682-2995701 MS.gene051936:CDS 30.0%
TCATGTGTTTAAATCGAAGT+CGG + chr2.2:2993647-2993666 MS.gene051936:CDS 30.0%
TCGAGACCATTTAATGTAAT+CGG - chr2.2:2995014-2995033 None:intergenic 30.0%
TCTACCTGAGACATAATTAT+TGG - chr2.2:2992494-2992513 None:intergenic 30.0%
TCTACTCAATCACATATCTT+TGG - chr2.2:2993850-2993869 None:intergenic 30.0%
TGAAAATGAATATGGACCTA+TGG + chr2.2:2992607-2992626 MS.gene051936:CDS 30.0%
TGTTTACCATATTCATCAAG+AGG - chr2.2:2993324-2993343 None:intergenic 30.0%
TTAACTCTTTGCAGTACTAA+AGG + chr2.2:2996063-2996082 MS.gene051936:intron 30.0%
TTAGAGGCTAAAATCATTGA+AGG - chr2.2:2992806-2992825 None:intergenic 30.0%
TTGGTTGTGTTTGAAGAATT+GGG + chr2.2:2995612-2995631 MS.gene051936:CDS 30.0%
TTTGGTGAAGTTCATAAAGT+TGG + chr2.2:2992048-2992067 MS.gene051936:CDS 30.0%
! AATTTAATGTGCTGTTGTGT+AGG + chr2.2:2993177-2993196 MS.gene051936:intron 30.0%
! ATTTAATGTGCTGTTGTGTA+GGG + chr2.2:2993178-2993197 MS.gene051936:intron 30.0%
! CTATAGCAATACCTTTTCAA+AGG - chr2.2:2995898-2995917 None:intergenic 30.0%
! CTTTTATGTTTGCAGGTTTA+CGG + chr2.2:2993037-2993056 MS.gene051936:intron 30.0%
! GTCTTACAATACCTTTGAAA+AGG + chr2.2:2995884-2995903 MS.gene051936:CDS 30.0%
! TATCATGGAGGAACAAATTT+TGG + chr2.2:2993249-2993268 MS.gene051936:CDS 30.0%
! TCTAAAGCTATCACCATTAA+TGG + chr2.2:2991606-2991625 MS.gene051936:CDS 30.0%
! TGATGACTCATCATTCATTT+TGG + chr2.2:2994271-2994290 MS.gene051936:intron 30.0%
! TTAGCTTTCTGTATAAGATC+TGG - chr2.2:2991819-2991838 None:intergenic 30.0%
! TTGTTCCTTTCCTATCTTTT+TGG + chr2.2:2992147-2992166 MS.gene051936:intron 30.0%
! TTTTGCCAAAAAGATAGGAA+AGG - chr2.2:2992155-2992174 None:intergenic 30.0%
!! GAAGGTACTAATCAATGAAA+AGG - chr2.2:2992359-2992378 None:intergenic 30.0%
!! TAATTTTGTTTCCTGTGTAC+AGG + chr2.2:2993411-2993430 MS.gene051936:intron 30.0%
!! TTGTTGTTTCAGAATTGTGT+TGG + chr2.2:2996185-2996204 MS.gene051936:intron 30.0%
!! TTTTGGCTAAAAGTTAGCTT+GGG - chr2.2:2994721-2994740 None:intergenic 30.0%
!!! ATTTTGGCTAAAAGTTAGCT+TGG - chr2.2:2994722-2994741 None:intergenic 30.0%
!!! CAGACTTATGTTTTTTGGAA+TGG + chr2.2:2991861-2991880 MS.gene051936:CDS 30.0%
!!! TGGTGTAGTATTATTTTGAG+GGG + chr2.2:2992017-2992036 MS.gene051936:intron 30.0%
AAAGGACAAGTGTGGTTAAA+TGG + chr2.2:2995335-2995354 MS.gene051936:CDS 35.0%
AACTGAAAATGCCATGTCTT+CGG - chr2.2:2993093-2993112 None:intergenic 35.0%
AATGAATGGATCCAGAAATG+AGG - chr2.2:2991644-2991663 None:intergenic 35.0%
AATTCAGCTGAACTTACAAC+AGG - chr2.2:2992746-2992765 None:intergenic 35.0%
ACATTAAATGGTCTCGATGA+AGG + chr2.2:2995017-2995036 MS.gene051936:CDS 35.0%
ACTTCTCAGAAATCCTTCAT+TGG - chr2.2:2994354-2994373 None:intergenic 35.0%
AGCAATAAAACTCTCTGAAC+CGG + chr2.2:2993479-2993498 MS.gene051936:CDS 35.0%
AGGATTACAAACCAAAGATG+TGG + chr2.2:2992895-2992914 MS.gene051936:CDS 35.0%
AGTGCTTCTTGGATAATGAA+TGG - chr2.2:2991658-2991677 None:intergenic 35.0%
AGTTATCAGATGCAAACTTC+TGG + chr2.2:2995720-2995739 MS.gene051936:CDS 35.0%
ATCACAACACTAGCAAAAGA+AGG - chr2.2:2994326-2994345 None:intergenic 35.0%
ATCTTTCTGTTCATTGCAGA+TGG - chr2.2:2993995-2994014 None:intergenic 35.0%
ATTATTACTTTGCCAGGTGA+AGG - chr2.2:2991894-2991913 None:intergenic 35.0%
CAGGTAAATCCTACACTAAA+TGG + chr2.2:2992648-2992667 MS.gene051936:CDS 35.0%
CATGTGTTTAAATCGAAGTC+GGG + chr2.2:2993648-2993667 MS.gene051936:CDS 35.0%
CATTTAGTGTAGGATTTACC+TGG - chr2.2:2992650-2992669 None:intergenic 35.0%
CGAGACCATTTAATGTAATC+GGG - chr2.2:2995013-2995032 None:intergenic 35.0%
CTTATACAGAAAGCTAAGGA+AGG + chr2.2:2991822-2991841 MS.gene051936:CDS 35.0%
CTTCTCAGAAATCCTTCATT+GGG - chr2.2:2994353-2994372 None:intergenic 35.0%
GAACAGAAAGATATTCCTCT+CGG + chr2.2:2994003-2994022 MS.gene051936:intron 35.0%
GAATGAACTATCATCAGTAG+AGG - chr2.2:2994149-2994168 None:intergenic 35.0%
GAGACTTTCTTCAAGACATT+TGG - chr2.2:2996266-2996285 None:intergenic 35.0%
GAGATTTAACCGATTACTTG+TGG + chr2.2:2994206-2994225 MS.gene051936:CDS 35.0%
GATCCTTCTTTGTCCATTAA+TGG - chr2.2:2991622-2991641 None:intergenic 35.0%
GCAAGATTTATACAGAAAGG+AGG + chr2.2:2993113-2993132 MS.gene051936:CDS 35.0%
GCATTCCATGTTTCAAAATG+AGG - chr2.2:2994978-2994997 None:intergenic 35.0%
GTTACTGTAACACAGAATGT+TGG + chr2.2:2994951-2994970 MS.gene051936:intron 35.0%
GTTGTTTATTACTCACTCTG+TGG - chr2.2:2994236-2994255 None:intergenic 35.0%
TCACAACACTAGCAAAAGAA+GGG - chr2.2:2994325-2994344 None:intergenic 35.0%
TCCAAAATCTCTTTACAGGT+TGG + chr2.2:2994043-2994062 MS.gene051936:intron 35.0%
TCTTGTGGAAACTTTCATGA+AGG + chr2.2:2995843-2995862 MS.gene051936:CDS 35.0%
TGGTCCAATAATTATGTCTC+AGG + chr2.2:2992487-2992506 MS.gene051936:CDS 35.0%
TGGTTAAATGGACAGAATCT+TGG + chr2.2:2995347-2995366 MS.gene051936:CDS 35.0%
TGTTCATTTCAGTATCATGG+AGG + chr2.2:2993237-2993256 MS.gene051936:intron 35.0%
TTACTGTAGAATGAGCTTCA+GGG + chr2.2:2991710-2991729 MS.gene051936:intron 35.0%
TTCTTACAGTGTTATCTGCA+GGG + chr2.2:2994387-2994406 MS.gene051936:CDS 35.0%
TTCTTCAAGACATTTGGACA+TGG - chr2.2:2996260-2996279 None:intergenic 35.0%
TTGATATGATGAAAGCAGAC+AGG + chr2.2:2992447-2992466 MS.gene051936:CDS 35.0%
! AATGAAGGATTTCTGAGAAG+TGG + chr2.2:2994353-2994372 MS.gene051936:CDS 35.0%
! ACCAACCTGTAAAGAGATTT+TGG - chr2.2:2994047-2994066 None:intergenic 35.0%
! ACGTTTTACGTCGAAATTAG+AGG - chr2.2:2992822-2992841 None:intergenic 35.0%
! ACTGTGTCACCTGAAAATTT+TGG + chr2.2:2996227-2996246 MS.gene051936:CDS 35.0%
! AGAGATATTTTGTTGACACC+AGG - chr2.2:2994757-2994776 None:intergenic 35.0%
! ATCGATGATATTTTCTGTCC+AGG - chr2.2:2995792-2995811 None:intergenic 35.0%
! CCAAAAGCACATTTATCTTG+TGG + chr2.2:2995765-2995784 MS.gene051936:CDS 35.0%
! CCACAAGATAAATGTGCTTT+TGG - chr2.2:2995768-2995787 None:intergenic 35.0%
! CTGGTCTTTATGTTCATCTA+AGG + chr2.2:2992080-2992099 MS.gene051936:CDS 35.0%
! TCACCATTAATGGACAAAGA+AGG + chr2.2:2991616-2991635 MS.gene051936:CDS 35.0%
! TCATAGCTTGTAGCAATGAA+AGG - chr2.2:2993291-2993310 None:intergenic 35.0%
! TCGATGATATTTTCTGTCCA+GGG - chr2.2:2995791-2995810 None:intergenic 35.0%
! TGCCTTGCTTCTTATTTCTT+AGG + chr2.2:2992945-2992964 MS.gene051936:intron 35.0%
! TGTTCCTCTTTTATGTTTGC+AGG + chr2.2:2993030-2993049 MS.gene051936:intron 35.0%
! TTTGGCTAAAAGTTAGCTTG+GGG - chr2.2:2994720-2994739 None:intergenic 35.0%
! TTTGTGCTGAGTGGAATTTT+GGG + chr2.2:2992116-2992135 MS.gene051936:CDS 35.0%
!! ACAAATTTTGGTAGAACTGC+TGG + chr2.2:2993261-2993280 MS.gene051936:CDS 35.0%
!! TCAGTTCTAAAACTGATACC+AGG - chr2.2:2992264-2992283 None:intergenic 35.0%
!! TTTAATTTTGGATCTCCGAG+AGG - chr2.2:2994021-2994040 None:intergenic 35.0%
!! TTTATTTAGGTTGGTCTCCA+TGG + chr2.2:2995155-2995174 MS.gene051936:intron 35.0%
!! TTTTGAGGGGAACTATGATT+TGG + chr2.2:2992030-2992049 MS.gene051936:CDS 35.0%
!! TTTTTAGGGGTTTTCCTGTT+TGG + chr2.2:2992226-2992245 MS.gene051936:intron 35.0%
!!! CATTTTGAAACATGGAATGC+TGG + chr2.2:2994978-2994997 MS.gene051936:CDS 35.0%
!!! GTAGTTTTGTACCAAGTCAA+TGG - chr2.2:2995260-2995279 None:intergenic 35.0%
AACACGAGTCATCTTCATCT+GGG - chr2.2:2994080-2994099 None:intergenic 40.0%
AAGGAGAGTAACGATGTTAG+CGG - chr2.2:2994664-2994683 None:intergenic 40.0%
AAGTTTCCACAAGATCCTAC+TGG - chr2.2:2995837-2995856 None:intergenic 40.0%
ACAACACTAGCAAAAGAAGG+GGG - chr2.2:2994323-2994342 None:intergenic 40.0%
ACACCGTTTATAACACTGCA+AGG + chr2.2:2993787-2993806 MS.gene051936:CDS 40.0%
AGAATGCTTATAGACCAAGG+AGG - chr2.2:2993753-2993772 None:intergenic 40.0%
AGACAGGCTATTTGAATCTC+AGG + chr2.2:2992463-2992482 MS.gene051936:CDS 40.0%
AGCAGAAGAACCAATGATGA+TGG - chr2.2:2991540-2991559 None:intergenic 40.0%
ATACAGAAAGCTAAGGAAGG+AGG + chr2.2:2991825-2991844 MS.gene051936:CDS 40.0%
ATAGTTTCCGATCCGTGTAA+TGG - chr2.2:2993526-2993545 None:intergenic 40.0%
ATCACAATAGAAGCCATTGC+AGG - chr2.2:2992859-2992878 None:intergenic 40.0%
ATCGGAAACTATCAAGAGGT+GGG + chr2.2:2993534-2993553 MS.gene051936:intron 40.0%
ATGACTCGTGTTCCTATTCA+CGG + chr2.2:2994088-2994107 MS.gene051936:CDS 40.0%
ATTGCTACGGCAACCAAAAT+GGG + chr2.2:2993434-2993453 MS.gene051936:CDS 40.0%
CAAAATGTGAAGCTCATACC+TGG + chr2.2:2994736-2994755 MS.gene051936:CDS 40.0%
CAAAGAAGGATCCTCATTTC+TGG + chr2.2:2991630-2991649 MS.gene051936:CDS 40.0%
CACAACACTAGCAAAAGAAG+GGG - chr2.2:2994324-2994343 None:intergenic 40.0%
CACCCTTGCAGTGTTATAAA+CGG - chr2.2:2993793-2993812 None:intergenic 40.0%
CACCGTTTATAACACTGCAA+GGG + chr2.2:2993788-2993807 MS.gene051936:CDS 40.0%
CTGCTAGCATGTTCTCTTAT+TGG + chr2.2:2991555-2991574 MS.gene051936:CDS 40.0%
CTTGGCCCGATTACATTAAA+TGG + chr2.2:2995005-2995024 MS.gene051936:CDS 40.0%
CTTTATAAGCAGGCCAGTAA+CGG - chr2.2:2995373-2995392 None:intergenic 40.0%
GACAGGCTATTTGAATCTCA+GGG + chr2.2:2992464-2992483 MS.gene051936:CDS 40.0%
GATAGTTCATTCACCATGAC+CGG + chr2.2:2994157-2994176 MS.gene051936:CDS 40.0%
GATGCACCTCTTGATGAATA+TGG + chr2.2:2993315-2993334 MS.gene051936:CDS 40.0%
GCACCAATTTCATACTCCAT+AGG - chr2.2:2992626-2992645 None:intergenic 40.0%
GCAGATAACACTGTAAGAAC+AGG - chr2.2:2994386-2994405 None:intergenic 40.0%
GGAAGAATGCTTATAGACCA+AGG - chr2.2:2993756-2993775 None:intergenic 40.0%
GGAATGTACTTCAACCAAAC+AGG - chr2.2:2992243-2992262 None:intergenic 40.0%
GGACCTATGGAGTATGAAAT+TGG + chr2.2:2992620-2992639 MS.gene051936:CDS 40.0%
GGATCTCCAGAAATTAAAGC+CGG - chr2.2:2993501-2993520 None:intergenic 40.0%
GTACAGATTAACACCTGCAA+TGG + chr2.2:2992843-2992862 MS.gene051936:intron 40.0%
GTTACTGTAGAATGAGCTTC+AGG + chr2.2:2991709-2991728 MS.gene051936:intron 40.0%
GTTCTTACAGTGTTATCTGC+AGG + chr2.2:2994386-2994405 MS.gene051936:CDS 40.0%
GTTGTGATTGATCCCAATGA+AGG + chr2.2:2994338-2994357 MS.gene051936:CDS 40.0%
GTTGTGTTTGAAGAATTGGG+CGG + chr2.2:2995615-2995634 MS.gene051936:CDS 40.0%
GTTTAACTGCTCTAGTAGAC+CGG - chr2.2:2994179-2994198 None:intergenic 40.0%
GTTTGGTTGAAGTACATTCC+TGG + chr2.2:2992243-2992262 MS.gene051936:CDS 40.0%
TTCCACTCAGCACAAACATA+AGG - chr2.2:2992112-2992131 None:intergenic 40.0%
TTTATAACACTGCAAGGGTG+AGG + chr2.2:2993793-2993812 MS.gene051936:intron 40.0%
! AAATGTGCTTTTGGTCTCAC+AGG - chr2.2:2995759-2995778 None:intergenic 40.0%
! AGGATTTCTGAGAAGTGGAA+AGG + chr2.2:2994358-2994377 MS.gene051936:CDS 40.0%
! CAGGTATGAGCTTCACATTT+TGG - chr2.2:2994738-2994757 None:intergenic 40.0%
! CTTCCCATGTCTAAAGCAAA+CGG - chr2.2:2995308-2995327 None:intergenic 40.0%
! GCTACTGTTGCATAAGCTTT+TGG - chr2.2:2993705-2993724 None:intergenic 40.0%
! GCTTATGCAACAGTAGCTTT+TGG + chr2.2:2993708-2993727 MS.gene051936:CDS 40.0%
! GCTTTAGACATGGGAAGTAT+GGG + chr2.2:2995311-2995330 MS.gene051936:CDS 40.0%
! GGATCTCCTCCAAAATTTTC+AGG - chr2.2:2996239-2996258 None:intergenic 40.0%
! GTGTCACCTGAAAATTTTGG+AGG + chr2.2:2996230-2996249 MS.gene051936:CDS 40.0%
! GTTTGTGCTGAGTGGAATTT+TGG + chr2.2:2992115-2992134 MS.gene051936:CDS 40.0%
! TCGATCAAATTCGCTAGCTT+TGG + chr2.2:2995807-2995826 MS.gene051936:CDS 40.0%
! TCGTTACTCTCCTTTTGATC+AGG + chr2.2:2994670-2994689 MS.gene051936:intron 40.0%
! TCTCTTCTAAGTGTTGCAGT+TGG + chr2.2:2994772-2994791 MS.gene051936:CDS 40.0%
! TCTGAACCGGCTTTAATTTC+TGG + chr2.2:2993492-2993511 MS.gene051936:CDS 40.0%
! TGCTTTAGACATGGGAAGTA+TGG + chr2.2:2995310-2995329 MS.gene051936:CDS 40.0%
! TGTGGAGTACCACAAGTAAT+CGG - chr2.2:2994218-2994237 None:intergenic 40.0%
!! AATTTTGGTAGAACTGCTGG+TGG + chr2.2:2993264-2993283 MS.gene051936:CDS 40.0%
!!! GGTGGGACTTGTTTTAGTTA+CGG + chr2.2:2993551-2993570 MS.gene051936:intron 40.0%
!!! GTGGGACTTGTTTTAGTTAC+GGG + chr2.2:2993552-2993571 MS.gene051936:intron 40.0%
!!! TTGGCCCTCATTTTGAAACA+TGG + chr2.2:2994970-2994989 MS.gene051936:CDS 40.0%
AATGGACATGAACCTTCACC+TGG + chr2.2:2991879-2991898 MS.gene051936:CDS 45.0%
ACATGGAATGCTGGTGTTCT+TGG + chr2.2:2994987-2995006 MS.gene051936:CDS 45.0%
ACCAAAATGGGGTCATCTGA+AGG + chr2.2:2993446-2993465 MS.gene051936:CDS 45.0%
ACCGAGAGAATGAAGACTCA+AGG - chr2.2:2995186-2995205 None:intergenic 45.0%
ACGGATCGGAAACTATCAAG+AGG + chr2.2:2993530-2993549 MS.gene051936:CDS 45.0%
AGGCTATTTGAATCTCAGGG+TGG + chr2.2:2992467-2992486 MS.gene051936:CDS 45.0%
ATCTGCTGCCCATTTAGTGT+AGG - chr2.2:2992660-2992679 None:intergenic 45.0%
ATGGTCTCGATGAAGGTAGA+AGG + chr2.2:2995024-2995043 MS.gene051936:CDS 45.0%
ATGTAGAAGTAACTGTGGCG+AGG + chr2.2:2995445-2995464 MS.gene051936:CDS 45.0%
CAAAGATGTGGACAGAAGCT+TGG + chr2.2:2992907-2992926 MS.gene051936:CDS 45.0%
CAAGATAGTCCACCGTGAAT+AGG - chr2.2:2994103-2994122 None:intergenic 45.0%
CAAGCTTCTGTCCACATCTT+TGG - chr2.2:2992909-2992928 None:intergenic 45.0%
CAATTATGATCGGCTGACAG+TGG - chr2.2:2996003-2996022 None:intergenic 45.0%
CACTAAATGGGCAGCAGATA+TGG + chr2.2:2992661-2992680 MS.gene051936:CDS 45.0%
CATTCATGGCTGATACCAAC+TGG + chr2.2:2995582-2995601 MS.gene051936:CDS 45.0%
CGGCTTAGTATTGTAACGCA+GGG - chr2.2:2994860-2994879 None:intergenic 45.0%
CTGGAGATCCTACCATTACA+CGG + chr2.2:2993511-2993530 MS.gene051936:CDS 45.0%
GAAAGCTAAGGAAGGAGGTT+TGG + chr2.2:2991830-2991849 MS.gene051936:CDS 45.0%
GAACACGAGTCATCTTCATC+TGG - chr2.2:2994081-2994100 None:intergenic 45.0%
GATCCTACCATTACACGGAT+CGG + chr2.2:2993516-2993535 MS.gene051936:CDS 45.0%
GATCGGAAACTATCAAGAGG+TGG + chr2.2:2993533-2993552 MS.gene051936:intron 45.0%
GATTGCTACGGCAACCAAAA+TGG + chr2.2:2993433-2993452 MS.gene051936:CDS 45.0%
GCCTTGAGTCTTCATTCTCT+CGG + chr2.2:2995182-2995201 MS.gene051936:CDS 45.0%
GCTGAACTTACAACAGGATC+AGG - chr2.2:2992740-2992759 None:intergenic 45.0%
GGCAAGTTAGCGATAAGACA+TGG - chr2.2:2994302-2994321 None:intergenic 45.0%
GGCTTAGTATTGTAACGCAG+GGG - chr2.2:2994859-2994878 None:intergenic 45.0%
GGTACCATGTTCCTCATTCA+TGG + chr2.2:2995568-2995587 MS.gene051936:intron 45.0%
GTATGGGAAAAGGACAAGTG+TGG + chr2.2:2995327-2995346 MS.gene051936:CDS 45.0%
GTCCTTATGTTTGTGCTGAG+TGG + chr2.2:2992107-2992126 MS.gene051936:CDS 45.0%
GTGGAAGGTTCCATCATCAT+TGG + chr2.2:2991527-2991546 MS.gene051936:CDS 45.0%
GTTGGTATCAGCCATGAATG+AGG - chr2.2:2995582-2995601 None:intergenic 45.0%
GTTTGCAGGTTTACGGAGTT+TGG + chr2.2:2993044-2993063 MS.gene051936:intron 45.0%
TAAACGGTGTTCTTGCAGTC+AGG - chr2.2:2993777-2993796 None:intergenic 45.0%
TAAGAAAGGTCAAGCAAGCG+TGG - chr2.2:2994584-2994603 None:intergenic 45.0%
TCAGCCATGAATGAGGAACA+TGG - chr2.2:2995575-2995594 None:intergenic 45.0%
TCCTGTGTACAGGATTGCTA+CGG + chr2.2:2993421-2993440 MS.gene051936:intron 45.0%
TCGGCTTAGTATTGTAACGC+AGG - chr2.2:2994861-2994880 None:intergenic 45.0%
TCTTGCTTGCACATGATCCA+CGG - chr2.2:2992710-2992729 None:intergenic 45.0%
TGCATTACAACTTGCCTCCT+TGG + chr2.2:2993736-2993755 MS.gene051936:CDS 45.0%
TGCGTAGTCACAGTTATCAC+AGG - chr2.2:2995405-2995424 None:intergenic 45.0%
TGGTCTCGATGAAGGTAGAA+GGG + chr2.2:2995025-2995044 MS.gene051936:CDS 45.0%
TGTGATAACTGTGACTACGC+AGG + chr2.2:2995404-2995423 MS.gene051936:CDS 45.0%
TGTTGGACAGAACTCATGCA+AGG + chr2.2:2996202-2996221 MS.gene051936:CDS 45.0%
TTCGTCAATAGTCAGCTGTC+AGG + chr2.2:2994425-2994444 MS.gene051936:CDS 45.0%
TTGAGTCTTCATTCTCTCGG+TGG + chr2.2:2995185-2995204 MS.gene051936:CDS 45.0%
TTGCTACGGCAACCAAAATG+GGG + chr2.2:2993435-2993454 MS.gene051936:CDS 45.0%
TTTCCGATCCGTGTAATGGT+AGG - chr2.2:2993522-2993541 None:intergenic 45.0%
! ATAGAGAGAAGAAAGCGCGA+TGG - chr2.2:2995096-2995115 None:intergenic 45.0%
! GACATGGGAAGTATGGGAAA+AGG + chr2.2:2995317-2995336 MS.gene051936:CDS 45.0%
! GAGTATGAAATTGGTGCTCC+AGG + chr2.2:2992629-2992648 MS.gene051936:CDS 45.0%
! GCACCGTTTGCTTTAGACAT+GGG + chr2.2:2995302-2995321 MS.gene051936:CDS 45.0%
! TAGAGAGAAGAAAGCGCGAT+GGG - chr2.2:2995095-2995114 None:intergenic 45.0%
! TCCTTCAGATGACCCCATTT+TGG - chr2.2:2993450-2993469 None:intergenic 45.0%
! TGCACCGTTTGCTTTAGACA+TGG + chr2.2:2995301-2995320 MS.gene051936:CDS 45.0%
! TTGGCAGACATGGTCTTACA+AGG + chr2.2:2995055-2995074 MS.gene051936:CDS 45.0%
!! AATACCTCAGGAGTGCTTCT+TGG - chr2.2:2991669-2991688 None:intergenic 45.0%
!! ATAAAGTTGGTGCAGCAAGC+TGG + chr2.2:2992061-2992080 MS.gene051936:CDS 45.0%
!! CTATTCACGGTGGACTATCT+TGG + chr2.2:2994101-2994120 MS.gene051936:CDS 45.0%
!! GCTGAGTGGAATTTTGGGTA+GGG + chr2.2:2992121-2992140 MS.gene051936:intron 45.0%
!! TCAGGTGAGGAGCATTATAC+TGG + chr2.2:2994443-2994462 MS.gene051936:intron 45.0%
!! TGCTGAGTGGAATTTTGGGT+AGG + chr2.2:2992120-2992139 MS.gene051936:intron 45.0%
!! TTATCCAAGAAGCACTCCTG+AGG + chr2.2:2991662-2991681 MS.gene051936:CDS 45.0%
!!! AAAAATAATCTTTTTTTTTT+TGG + chr2.2:2991997-2992016 MS.gene051936:intron 5.0%
AAACGGTGCAATTCCGTCTG+GGG - chr2.2:2995291-2995310 None:intergenic 50.0%
AAGACCATGTCTGCCAAGAC+AGG - chr2.2:2995052-2995071 None:intergenic 50.0%
AAGGTAGAAGGGACCTGTCT+TGG + chr2.2:2995036-2995055 MS.gene051936:CDS 50.0%
ACTACCTTTGATGCCCCAGA+CGG + chr2.2:2995275-2995294 MS.gene051936:intron 50.0%
ACTCGTGTTCCTATTCACGG+TGG + chr2.2:2994091-2994110 MS.gene051936:CDS 50.0%
AGAGAGAGAGAGAACGAACC+GGG - chr2.2:2994801-2994820 None:intergenic 50.0%
ATGTGGACAGAAGCTTGGAC+TGG + chr2.2:2992912-2992931 MS.gene051936:CDS 50.0%
CAAACGGTGCAATTCCGTCT+GGG - chr2.2:2995292-2995311 None:intergenic 50.0%
CAATAGTCAGCTGTCAGGTG+AGG + chr2.2:2994430-2994449 MS.gene051936:intron 50.0%
CTTGAAGAAAGTCTCGGTCG+AGG + chr2.2:2996271-2996290 MS.gene051936:CDS 50.0%
GAAAATGCCATGTCTTCGGC+AGG - chr2.2:2993089-2993108 None:intergenic 50.0%
GAAGACTCAAGGCTTCACCA+TGG - chr2.2:2995175-2995194 None:intergenic 50.0%
GACAGAATCTTGGCCGTTAC+TGG + chr2.2:2995357-2995376 MS.gene051936:CDS 50.0%
GAGAGAGAGAGAGAACGAAC+CGG - chr2.2:2994802-2994821 None:intergenic 50.0%
GCACATTTATCTTGTGGCCC+TGG + chr2.2:2995771-2995790 MS.gene051936:CDS 50.0%
GCAGATATGGCTGTAGGACT+TGG + chr2.2:2992674-2992693 MS.gene051936:CDS 50.0%
GGAGCTTGTGCTGCATTTCT+TGG + chr2.2:2993669-2993688 MS.gene051936:CDS 50.0%
GGTACTCCAGTAGGATCTTG+TGG + chr2.2:2995828-2995847 MS.gene051936:CDS 50.0%
GTCACAGTTATCACAGGTCC+CGG - chr2.2:2995399-2995418 None:intergenic 50.0%
GTTTACGGAGTTTGGAGGTC+CGG + chr2.2:2993052-2993071 MS.gene051936:CDS 50.0%
TGCAGGTTTACGGAGTTTGG+AGG + chr2.2:2993047-2993066 MS.gene051936:intron 50.0%
TTCTCTCGGTGGAAGTTCCT+CGG + chr2.2:2995196-2995215 MS.gene051936:CDS 50.0%
! AAGTGTTGCAGTTGGACTCC+CGG + chr2.2:2994780-2994799 MS.gene051936:CDS 50.0%
! AATTCCGTCTGGGGCATCAA+AGG - chr2.2:2995282-2995301 None:intergenic 50.0%
! ATGGCTGTAGGACTTGGTAC+CGG + chr2.2:2992680-2992699 MS.gene051936:CDS 50.0%
! CTCGTATGCAGCCATTGACT+TGG + chr2.2:2995246-2995265 MS.gene051936:intron 50.0%
! TGGCCTGCTTATAAAGCGTC+CGG + chr2.2:2995377-2995396 MS.gene051936:CDS 50.0%
!! GCTAGCTTTGGTACTCCAGT+AGG + chr2.2:2995819-2995838 MS.gene051936:CDS 50.0%
ATGCCATGTCTTCGGCAGGT+CGG - chr2.2:2993085-2993104 None:intergenic 55.0%
CAAAGTGGACGTCACACCGA+AGG + chr2.2:2993908-2993927 MS.gene051936:intron 55.0%
CTGCTCTAGTAGACCGGTCA+TGG - chr2.2:2994173-2994192 None:intergenic 55.0%
GAATTGGGCGGTGACCCTAA+TGG + chr2.2:2995627-2995646 MS.gene051936:CDS 55.0%
GCAAACGGTGCAATTCCGTC+TGG - chr2.2:2995293-2995312 None:intergenic 55.0%
GCACATGATCCACGGAACTC+CGG - chr2.2:2992702-2992721 None:intergenic 55.0%
GCCGTAGCAATCCTGTACAC+AGG - chr2.2:2993425-2993444 None:intergenic 55.0%
GTCCCGGACGCTTTATAAGC+AGG - chr2.2:2995383-2995402 None:intergenic 55.0%
GTGGCGAGGCTTCTCAAAGA+TGG + chr2.2:2995459-2995478 MS.gene051936:CDS 55.0%
TGGAAGTTCCTCGGTCGAGT+GGG + chr2.2:2995205-2995224 MS.gene051936:CDS 55.0%
TGGGCAGCAGATATGGCTGT+AGG + chr2.2:2992668-2992687 MS.gene051936:CDS 55.0%
! AGAAAGCGCGATGGGTGTTC+AGG - chr2.2:2995087-2995106 None:intergenic 55.0%
! GAAAGCGCGATGGGTGTTCA+GGG - chr2.2:2995086-2995105 None:intergenic 55.0%
! GGCCTGCTTATAAAGCGTCC+GGG + chr2.2:2995378-2995397 MS.gene051936:CDS 55.0%
ATGTCTTCGGCAGGTCGGTG+AGG - chr2.2:2993080-2993099 None:intergenic 60.0%
GGGACCTGTCTTGGCAGACA+TGG + chr2.2:2995045-2995064 MS.gene051936:CDS 60.0%
GTGGAAGTTCCTCGGTCGAG+TGG + chr2.2:2995204-2995223 MS.gene051936:CDS 60.0%
TCACCGACCTGCCGAAGACA+TGG + chr2.2:2993079-2993098 MS.gene051936:CDS 60.0%
! GACTTGGTACCGGAGTTCCG+TGG + chr2.2:2992690-2992709 MS.gene051936:CDS 60.0%
! TCCTCGGTCGAGTGGGTTCA+GGG + chr2.2:2995212-2995231 MS.gene051936:CDS 60.0%
! TTCCTCGGTCGAGTGGGTTC+AGG + chr2.2:2995211-2995230 MS.gene051936:CDS 60.0%
!! GGACAGAAGCTTGGACTGGC+TGG + chr2.2:2992916-2992935 MS.gene051936:CDS 60.0%
TCGGCAGGTCGGTGAGGTAC+CGG - chr2.2:2993074-2993093 None:intergenic 65.0%
! CCTCGGTCGAGTGGGTTCAG+GGG + chr2.2:2995213-2995232 MS.gene051936:CDS 65.0%
CCCCTGAACCCACTCGACCG+AGG - chr2.2:2995216-2995235 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2991525 2996307 2991525 ID=MS.gene051936
chr2.2 mRNA 2991525 2996307 2991525 ID=MS.gene051936.t1;Parent=MS.gene051936
chr2.2 exon 2991525 2991683 2991525 ID=MS.gene051936.t1.exon1;Parent=MS.gene051936.t1
chr2.2 CDS 2991525 2991683 2991525 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2991810 2991905 2991810 ID=MS.gene051936.t1.exon2;Parent=MS.gene051936.t1
chr2.2 CDS 2991810 2991905 2991810 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2992025 2992137 2992025 ID=MS.gene051936.t1.exon3;Parent=MS.gene051936.t1
chr2.2 CDS 2992025 2992137 2992025 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2992233 2992299 2992233 ID=MS.gene051936.t1.exon4;Parent=MS.gene051936.t1
chr2.2 CDS 2992233 2992299 2992233 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2992416 2992508 2992416 ID=MS.gene051936.t1.exon5;Parent=MS.gene051936.t1
chr2.2 CDS 2992416 2992508 2992416 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2992605 2992748 2992605 ID=MS.gene051936.t1.exon6;Parent=MS.gene051936.t1
chr2.2 CDS 2992605 2992748 2992605 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2992849 2992937 2992849 ID=MS.gene051936.t1.exon7;Parent=MS.gene051936.t1
chr2.2 CDS 2992849 2992937 2992849 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2993052 2993157 2993052 ID=MS.gene051936.t1.exon8;Parent=MS.gene051936.t1
chr2.2 CDS 2993052 2993157 2993052 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2993249 2993336 2993249 ID=MS.gene051936.t1.exon9;Parent=MS.gene051936.t1
chr2.2 CDS 2993249 2993336 2993249 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2993433 2993551 2993433 ID=MS.gene051936.t1.exon10;Parent=MS.gene051936.t1
chr2.2 CDS 2993433 2993551 2993433 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2993645 2993809 2993645 ID=MS.gene051936.t1.exon11;Parent=MS.gene051936.t1
chr2.2 CDS 2993645 2993809 2993645 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2994061 2994239 2994061 ID=MS.gene051936.t1.exon12;Parent=MS.gene051936.t1
chr2.2 CDS 2994061 2994239 2994061 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2994337 2994446 2994337 ID=MS.gene051936.t1.exon13;Parent=MS.gene051936.t1
chr2.2 CDS 2994337 2994446 2994337 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2994692 2994801 2994692 ID=MS.gene051936.t1.exon14;Parent=MS.gene051936.t1
chr2.2 CDS 2994692 2994801 2994692 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2994966 2995076 2994966 ID=MS.gene051936.t1.exon15;Parent=MS.gene051936.t1
chr2.2 CDS 2994966 2995076 2994966 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2995164 2995248 2995164 ID=MS.gene051936.t1.exon16;Parent=MS.gene051936.t1
chr2.2 CDS 2995164 2995248 2995164 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2995294 2995480 2995294 ID=MS.gene051936.t1.exon17;Parent=MS.gene051936.t1
chr2.2 CDS 2995294 2995480 2995294 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2995569 2995905 2995569 ID=MS.gene051936.t1.exon18;Parent=MS.gene051936.t1
chr2.2 CDS 2995569 2995905 2995569 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
chr2.2 exon 2996197 2996307 2996197 ID=MS.gene051936.t1.exon19;Parent=MS.gene051936.t1
chr2.2 CDS 2996197 2996307 2996197 ID=cds.MS.gene051936.t1;Parent=MS.gene051936.t1
Gene Sequence

>MS.gene051936

ATGTGGAAGGTTCCATCATCATTGGTTCTTCTGCTAGCATGTTCTCTTATTGGTTCTGTTATAGCTTCTGTGTCTTATGACTCTAAAGCTATCACCATTAATGGACAAAGAAGGATCCTCATTTCTGGATCCATTCATTATCCAAGAAGCACTCCTGAGGTATTATTATATAATATTTTTACTTGTTACTGTAGAATGAGCTTCAGGGTTGTTGTATTTTATTGTTTTTCTCAAATATTTATGTGATTTGTATAACTAAGTTGGTTTTTTTGTTCATATTTTCAGATGTGGCCAGATCTTATACAGAAAGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTTTGGAATGGACATGAACCTTCACCTGGCAAAGTAATAATAATAACTAATGATAATTAAAACAATGTCTTTTAGTTTTGGTAGTAGTTCTGCTCAAACAGTGCATAGTTATGATTTATGAGTGAAAAATAATCTTTTTTTTTTTGGTGTAGTATTATTTTGAGGGGAACTATGATTTGGTGAAGTTCATAAAGTTGGTGCAGCAAGCTGGTCTTTATGTTCATCTAAGGATTGGTCCTTATGTTTGTGCTGAGTGGAATTTTGGGTAGGGAAATTGTTCCTTTCCTATCTTTTTGGCAAAAATATTTGACACTTGTCAAACTAGAAATGTGTTAATAGATTTGCTTAATTGATTTTTAGGGGTTTTCCTGTTTGGTTGAAGTACATTCCTGGTATCAGTTTTAGAACTGACAATGATCCATTTAAGGTAATATTTTCAGTTATTATTATACCTTAAGCACTGTTAAAGATTCTCATTATTTCCCTTTTCATTGATTAGTACCTTCTAATTAGTTTTTGTTTTTATATATTGCCATAATGAAGTTTCAAATGCAAAAATTTACTGAGAAGATTGTTGATATGATGAAAGCAGACAGGCTATTTGAATCTCAGGGTGGTCCAATAATTATGTCTCAGGTAGACTAAACATGCTGCTAGCTTTCTACTTAATCTAATTTTGCTTTATATTATCTTATGTTTTATTTATTGACTAGAACTTGTGATTTTATGTAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCAGGTAAATCCTACACTAAATGGGCAGCAGATATGGCTGTAGGACTTGGTACCGGAGTTCCGTGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTGTTGTAAGTTCAGCTGAATTGTATCATTTTTTAAGAAAATATTTTTATTCATGAATGCCTTCAATGATTTTAGCCTCTAATTTCGACGTAAAACGTTGTACAGATTAACACCTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGATTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTATTGATGCCTTGCTTCTTATTTCTTAGGTTTCCATAAGAATGAGATAAATGCAAGCTAGATATAATATAAGATTGACTATACATTGCTTTTGTTCCTCTTTTATGTTTGCAGGTTTACGGAGTTTGGAGGTCCGGTACCTCACCGACCTGCCGAAGACATGGCATTTTCAGTTGCAAGATTTATACAGAAAGGAGGATCATTTATCAATTATTACATGGTAACTTCATTGTTTATTGAATTTAATGTGCTGTTGTGTAGGGTAACCATTTTTTAGTATTGAACTTGGCCCATTATTTTGTTCATTTCAGTATCATGGAGGAACAAATTTTGGTAGAACTGCTGGTGGTCCTTTCATTGCTACAAGCTATGACTATGATGCACCTCTTGATGAATATGGTAAACACAAAGGATTCTAATACTTGTTATAACCAATAAGAACTATACATATTTTATACACTTAAGTAGGGTTTTAATTTTGTTTCCTGTGTACAGGATTGCTACGGCAACCAAAATGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTCTGAACCGGCTTTAATTTCTGGAGATCCTACCATTACACGGATCGGAAACTATCAAGAGGTGGGACTTGTTTTAGTTACGGGAAAATTATCAAACCTATCTAAAATGCTTTGTAACAAGACTGAATTTCTATCTTTAATCATTACTGTGCAGGCTCATGTGTTTAAATCGAAGTCGGGAGCTTGTGCTGCATTTCTTGGAAACTATAATCCAAAAGCTTATGCAACAGTAGCTTTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACCGTTTATAACACTGCAAGGGTGAGGAAAAAAACATTTTCATTTCTGTAGAGCTTGACCAAAGATATGTGATTGAGTAGATTCAATAACATTTTATATTCAGTTATAGTCTTATTTAGCAAAGTGGACGTCACACCGAAGGAAAATAATGAAATTTTTCTAGTGTCTTATTTTTATTTACATGATCTTGTTGGACTGAATTTCCATCTGCAATGAACAGAAAGATATTCCTCTCGGAGATCCAAAATTAAAATTCCAAAATCTCTTTACAGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGTGTTCCTATTCACGGTGGACTATCTTGGCAAGTGTTCACTGAACAAACAGCCTCTACTGATGATAGTTCATTCACCATGACCGGTCTACTAGAGCAGTTAAACACAACAAGAGATTTAACCGATTACTTGTGGTACTCCACAGAGTGAGTAATAAACAACACTGCAGTTATGAAATGATGACTCATCATTCATTTTGGCTTCTCCATGTCTTATCGCTAACTTGCCCCCTTCTTTTGCTAGTGTTGTGATTGATCCCAATGAAGGATTTCTGAGAAGTGGAAAGGATCCTGTTCTTACAGTGTTATCTGCAGGGCATGCTTTGCATGTTTTCGTCAATAGTCAGCTGTCAGGTGAGGAGCATTATACTGGTTTATGAAATTTCATGTTAGATTAAAATTTGATGTATGCTCTTGAGGATATGATACATAGTAACAATACTTGGAATGAATATATCTAGGCTTCATTAAGTTATCAAAATTAGTCGCCACGCTTGCTTGACCTTTCTTATTCAAATAAAAAAAAATAGTCCGAATAAACTATTTTACTTCAAAAGCTAATAATTATCCGCTAACATCGTTACTCTCCTTTTGATCAGGAACTATATATGGAAGCTTAGAATTCCCCAAGCTAACTTTTAGCCAAAATGTGAAGCTCATACCTGGTGTCAACAAAATATCTCTTCTAAGTGTTGCAGTTGGACTCCCGGTTCGTTCTCTCTCTCTCTCACACACAGACATTGAAAATATATAGTTTTAAGAACCCCTGCGTTACAATACTAAGCCGATTTATCTGAATCATGAACTGTATTGTAGTATGATCTTTCTTGACAATTCTATATTACTTACTTGCTGCTTGTTACTGTAACACAGAATGTTGGCCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCGATTACATTAAATGGTCTCGATGAAGGTAGAAGGGACCTGTCTTGGCAGACATGGTCTTACAAGGTTCTGCCCTGAACACCCATCGCGCTTTCTTCTCTCTATATTTCCTGATTTTGCTCAAAAATTCATTAAAATTACTGTTTTATTTAGGTTGGTCTCCATGGTGAAGCCTTGAGTCTTCATTCTCTCGGTGGAAGTTCCTCGGTCGAGTGGGTTCAGGGGAGTTTAGTTTCTCGTATGCAGCCATTGACTTGGTACAAAACTACCTTTGATGCCCCAGACGGAATTGCACCGTTTGCTTTAGACATGGGAAGTATGGGAAAAGGACAAGTGTGGTTAAATGGACAGAATCTTGGCCGTTACTGGCCTGCTTATAAAGCGTCCGGGACCTGTGATAACTGTGACTACGCAGGAACTTATAATGAGAATAAATGTAGAAGTAACTGTGGCGAGGCTTCTCAAAGATGGTGAGTGAGAAACATAAAGTTTTCCTCATAGTTTTGCCTAATGCCGATGATAAATATTGATAAACTAATCACTAAATGGTAATTTCAGGTACCATGTTCCTCATTCATGGCTGATACCAACTGGAAATTTATTGGTTGTGTTTGAAGAATTGGGCGGTGACCCTAATGGAATCTTTTTAGTTAGAAGGGATATAGATAGTGTATGTGCAGATATTTATGAGTGGCAGCCAAATCTTATAAGTTATCAGATGCAAACTTCTGGCAAAACTAACAAACCTGTGAGACCAAAAGCACATTTATCTTGTGGCCCTGGACAGAAAATATCATCGATCAAATTCGCTAGCTTTGGTACTCCAGTAGGATCTTGTGGAAACTTTCATGAAGGAAGCTGTCATGCTCACAAGTCTTACAATACCTTTGAAAAGGTATTGCTATAGCTAGACATAGTTTCTGATAAAACATGATATCTTTTTAAGTTAAGATTCAATGCATATACATTGTCAGTATAAAAACTTTTTTCCACTGTCAGCCGATCATAATTGTCAGATCATTAAAAATGTTGCATCAACAGTGTATCAATATTTAACTCTTTGCAGTACTAAAGGCTCTAAAATAAAATCTTTTAGGTTCAAGTCGAAAAGTCAAATTTTCAACCATTTGTATTTGATTGTCACTTATACTTGTTTCATTAACCAAAAGTGATTTTGTTGTTTCAGAATTGTGTTGGACAGAACTCATGCAAGGTAACTGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAAGTCTCGGTCGAGGCCATTTGTACCTGA
Protein sequence

>MS.gene051936.t1

MWKVPSSLVLLLACSLIGSVIASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNDPFKFQMQKFTEKIVDMMKADRLFESQGGPIIMSQIENEYGPMEYEIGAPGKSYTKWAADMAVGLGTGVPWIMCKQDDAPDPVINTCNGFYCDYFSPNKDYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLSEPALISGDPTITRIGNYQEAHVFKSKSGACAAFLGNYNPKAYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWQVFTEQTASTDDSSFTMTGLLEQLNTTRDLTDYLWYSTDVVIDPNEGFLRSGKDPVLTVLSAGHALHVFVNSQLSGTIYGSLEFPKLTFSQNVKLIPGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLDEGRRDLSWQTWSYKVGLHGEALSLHSLGGSSSVEWVQGSLVSHGIAPFALDMGSMGKGQVWLNGQNLGRYWPAYKASGTCDNCDYAGTYNENKCRSNCGEASQRWYHVPHSWLIPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQTSGKTNKPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNFHEGSCHAHKSYNTFEKNCVGQNSCKVTVSPENFGGDPCPNVLKKVSVEAICT