AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85206

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85206.t1 MTR_2g100110 96.552 841 10 2 1 822 1 841 0.0 1679
MS.gene85206.t1 MTR_8g016230 84.211 836 117 1 2 822 3 838 0.0 1474
MS.gene85206.t1 MTR_2g100110 98.129 588 7 1 1 584 1 588 0.0 1197
MS.gene85206.t1 MTR_5g021190 62.994 835 289 4 4 821 6 837 0.0 1115
MS.gene85206.t1 MTR_2g039120 67.787 714 212 3 10 707 14 725 0.0 1033
MS.gene85206.t1 MTR_1g018200 68.652 705 202 4 20 707 27 729 0.0 1030
MS.gene85206.t1 MTR_2g039120 67.695 681 202 3 10 674 14 692 0.0 984
MS.gene85206.t1 MTR_1g023120 63.862 725 236 7 23 729 28 744 0.0 960
MS.gene85206.t1 MTR_3g112370 62.500 728 247 5 4 714 14 732 0.0 954
MS.gene85206.t1 MTR_2g094060 54.361 837 349 11 8 821 6 832 0.0 905
MS.gene85206.t1 MTR_2g039120 70.315 603 176 2 10 611 14 614 0.0 905
MS.gene85206.t1 MTR_1g023120 62.824 694 232 7 54 729 1 686 0.0 904
MS.gene85206.t1 MTR_2g094020 53.746 841 352 11 8 821 6 836 0.0 899
MS.gene85206.t1 MTR_4g059680 53.095 840 359 12 8 822 10 839 0.0 886
MS.gene85206.t1 MTR_2g039120 70.639 579 167 2 10 587 14 590 0.0 871
MS.gene85206.t1 MTR_2g094060 54.489 802 333 10 8 786 6 798 0.0 870
MS.gene85206.t1 MTR_8g085210 48.284 874 382 11 13 821 28 896 0.0 827
MS.gene85206.t1 MTR_2g094060 56.041 687 272 8 8 672 6 684 0.0 778
MS.gene85206.t1 MTR_3g096900 53.973 730 304 6 4 707 10 733 0.0 774
MS.gene85206.t1 MTR_2g042610 47.186 835 389 11 15 821 18 828 0.0 754
MS.gene85206.t1 MTR_3g096900 53.515 697 292 6 4 674 10 700 0.0 728
MS.gene85206.t1 MTR_5g024080 46.043 834 393 15 16 821 2 806 0.0 712
MS.gene85206.t1 MTR_5g025830 45.966 818 393 11 24 818 28 819 0.0 708
MS.gene85206.t1 MTR_3g117840 43.349 842 426 11 7 822 11 827 0.0 708
MS.gene85206.t1 MTR_4g073290 43.285 834 428 12 9 821 15 824 0.0 698
MS.gene85206.t1 MTR_3g005570 44.512 820 394 13 8 803 10 792 0.0 671
MS.gene85206.t1 MTR_3g096900 55.465 613 259 4 4 608 10 616 0.0 671
MS.gene85206.t1 MTR_3g088520 49.650 715 301 11 10 704 12 687 0.0 662
MS.gene85206.t1 MTR_3g096910 47.905 716 326 8 8 704 11 698 0.0 640
MS.gene85206.t1 MTR_3g088520 49.329 671 281 11 54 704 1 632 0.0 615
MS.gene85206.t1 MTR_3g096910 44.367 577 272 10 148 704 1 548 1.12e-150 454
MS.gene85206.t1 MTR_4g126330 41.487 417 130 8 279 679 131 449 8.83e-85 278
MS.gene85206.t1 MTR_4g126330 78.261 92 20 0 79 170 25 116 3.09e-44 166
MS.gene85206.t1 MTR_5g022590 41.765 340 156 9 43 380 11 310 7.90e-78 258
MS.gene85206.t1 MTR_5g022590 35.965 114 70 1 675 785 305 418 8.32e-14 74.7
MS.gene85206.t1 MTR_2g100000 31.768 362 207 9 34 366 64 414 2.01e-35 144
MS.gene85206.t1 MTR_6g007470 50.725 138 19 3 145 282 2 90 5.34e-29 116
MS.gene85206.t1 MTR_3g005610 30.255 314 169 10 432 725 26 309 2.61e-23 102
MS.gene85206.t1 MTR_8g076800 82.353 51 9 0 145 195 9 59 2.55e-19 89.4
MS.gene85206.t1 MTR_2g059440 28.808 302 161 11 432 712 26 294 5.96e-19 89.0
MS.gene85206.t1 MTR_4g126320 66.667 36 12 0 787 822 72 107 1.28e-12 65.5
MS.gene85206.t1 MTR_2g059430 27.536 276 130 10 448 712 10 226 1.47e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85206.t1 AT3G13750 77.925 829 168 1 9 822 19 847 0.0 1375
MS.gene85206.t1 AT4G36360 61.800 822 295 4 17 821 26 845 0.0 1109
MS.gene85206.t1 AT4G36360 61.800 822 294 5 17 821 26 844 0.0 1105
MS.gene85206.t1 AT4G26140 69.972 716 196 5 8 707 13 725 0.0 1053
MS.gene85206.t1 AT4G26140 67.746 741 195 6 8 707 13 750 0.0 1038
MS.gene85206.t1 AT3G52840 66.620 716 219 6 8 707 67 778 0.0 1008
MS.gene85206.t1 AT3G52840 66.620 716 219 6 8 707 13 724 0.0 1006
MS.gene85206.t1 AT5G56870 67.458 716 212 6 8 707 13 723 0.0 996
MS.gene85206.t1 AT4G26140 67.655 708 185 6 8 674 13 717 0.0 989
MS.gene85206.t1 AT1G45130 64.690 725 230 7 8 710 12 732 0.0 975
MS.gene85206.t1 AT4G26140 72.397 605 161 5 8 611 13 612 0.0 913
MS.gene85206.t1 AT4G26140 72.397 605 161 5 8 611 13 612 0.0 913
MS.gene85206.t1 AT4G26140 71.901 605 166 4 8 611 13 614 0.0 913
MS.gene85206.t1 AT2G28470 53.717 834 350 11 18 822 20 846 0.0 909
MS.gene85206.t1 AT2G28470 53.717 834 350 11 18 822 20 846 0.0 909
MS.gene85206.t1 AT2G28470 53.717 834 350 11 18 822 26 852 0.0 908
MS.gene85206.t1 AT2G28470 53.717 834 350 11 18 822 26 852 0.0 908
MS.gene85206.t1 AT1G45130 63.411 645 213 6 85 710 13 653 0.0 855
MS.gene85206.t1 AT2G32810 49.143 875 382 13 2 822 12 877 0.0 836
MS.gene85206.t1 AT4G26140 72.344 546 147 4 8 552 13 555 0.0 827
MS.gene85206.t1 AT4G26140 69.352 571 146 5 8 552 13 580 0.0 815
MS.gene85206.t1 AT4G26140 69.352 571 146 5 8 552 13 580 0.0 815
MS.gene85206.t1 AT2G32810 49.820 833 355 13 2 780 12 835 0.0 804
MS.gene85206.t1 AT2G28470 56.094 681 267 7 18 672 26 700 0.0 789
MS.gene85206.t1 AT5G63810 51.857 727 327 4 8 712 16 741 0.0 772
MS.gene85206.t1 AT5G20710 46.961 839 394 14 8 821 14 826 0.0 749
MS.gene85206.t1 AT1G31740 46.618 828 378 13 7 821 3 779 0.0 731
MS.gene85206.t1 AT1G77410 45.789 843 397 14 6 822 7 815 0.0 722
MS.gene85206.t1 AT1G77410 45.519 848 397 15 6 822 7 820 0.0 716
MS.gene85206.t1 AT2G16730 43.152 825 418 15 23 821 43 842 0.0 656
MS.gene85206.t1 AT5G63800 49.000 700 309 9 24 704 32 702 0.0 642
MS.gene85206.t1 AT4G35010 41.928 830 421 17 23 821 40 839 0.0 640
MS.gene85206.t1 AT4G38590 41.846 791 413 13 54 821 1 767 0.0 616
MS.gene85206.t1 AT4G38590 41.258 795 416 14 50 821 65 831 0.0 602
MS.gene85206.t1 AT1G77410 44.414 725 343 14 124 822 19 709 0.0 582
MS.gene85206.t1 AT1G77410 44.414 725 343 14 124 822 19 709 0.0 582
MS.gene85206.t1 AT5G20710 42.016 645 325 13 202 821 1 621 4.61e-165 493
MS.gene85206.t1 AT2G04060 35.694 353 168 8 289 641 23 316 2.97e-53 192
MS.gene85206.t1 AT1G72990 36.982 338 163 13 34 337 18 339 8.53e-47 177
MS.gene85206.t1 AT1G72990 36.982 338 163 13 34 337 73 394 2.10e-46 177
MS.gene85206.t1 AT1G72990 36.982 338 163 13 34 337 73 394 2.10e-46 177
MS.gene85206.t1 AT1G72990 35.780 327 160 13 45 337 22 332 2.44e-41 161
MS.gene85206.t1 AT2G04062 43.023 172 77 2 24 195 7 157 3.08e-37 137
MS.gene85206.t1 AT3G53080 38.095 84 50 2 740 822 71 153 5.22e-14 70.9
MS.gene85206.t1 AT3G53075 35.955 89 55 2 735 822 76 163 9.02e-11 61.6

Find 208 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTAGCATGTTCTCTTAT+TGG 0.082868 2.4:+4225563 MS.gene85206:CDS
GTTTGTGCTGAATGGAATTT+TGG 0.144864 2.4:+4226122 MS.gene85206:CDS
TTTGGTTTGTAATCCTTATT+TGG 0.159217 2.4:-4226895 None:intergenic
TCTGAACCGGCTTTAATTTC+TGG 0.172970 2.4:+4227499 MS.gene85206:CDS
ACTGAAAATATTACCTTAAA+TGG 0.184873 2.4:-4226298 None:intergenic
AACTGACAATGATCCATTTA+AGG 0.186889 2.4:+4226285 MS.gene85206:CDS
CTTGGCCCGATTACATTAAA+TGG 0.188773 2.4:+4229014 MS.gene85206:CDS
GATCCTTCTTTGTCCATTAA+TGG 0.198924 2.4:-4225627 None:intergenic
TCTACCTGAGACATAATTAT+TGG 0.206709 2.4:-4226498 None:intergenic
ATGTAGATTGAAAATGAATA+TGG 0.212289 2.4:+4226606 MS.gene85206:intron
GATTGCTACGGCAACCAAAA+TGG 0.213807 2.4:+4227440 MS.gene85206:CDS
TATCATGGAGGAACAAATTT+TGG 0.217874 2.4:+4227256 MS.gene85206:CDS
GATACCAACTGGAAATTTAT+TGG 0.218053 2.4:+4229602 MS.gene85206:CDS
TGCTTTAGACATGGGAAGTA+TGG 0.233821 2.4:+4229319 MS.gene85206:CDS
GCTACTGTTGCATAAGCTTT+TGG 0.236595 2.4:-4227709 None:intergenic
TCCTTCAGATGACCCCATTT+TGG 0.237236 2.4:-4227454 None:intergenic
CAAGCTTCTGTCCACATCTT+TGG 0.242648 2.4:-4226913 None:intergenic
CAGGTAAATCCTACACTAAA+TGG 0.247949 2.4:+4226655 MS.gene85206:CDS
TGATTATTTCTCTCCAAATA+AGG 0.248287 2.4:+4226882 MS.gene85206:CDS
CAAAGAAGGATCCTCATTTC+TGG 0.251203 2.4:+4225638 MS.gene85206:CDS
TGGTTAAATGGACAGAATTT+TGG 0.253559 2.4:+4229356 MS.gene85206:CDS
TCTAAAGCTATCACCATTAA+TGG 0.257290 2.4:+4225614 MS.gene85206:CDS
ATCTGATAACTTATAAGATT+TGG 0.262548 2.4:-4229717 None:intergenic
GGAGCTTGTGCTGCATTTCT+TGG 0.279746 2.4:+4227676 MS.gene85206:CDS
ATTGGTTGTGTTTGAAGAAT+TGG 0.289834 2.4:+4229620 MS.gene85206:CDS
TCGAGACCATTTAATGTAAT+CGG 0.293848 2.4:-4229020 None:intergenic
CACTAAATGGGCAGCAGATA+TGG 0.301029 2.4:+4226668 MS.gene85206:CDS
TTCCTCGGTCGAGTGGGTTC+AGG 0.307536 2.4:+4229220 MS.gene85206:CDS
GCTTATGCAACAGTAGCTTT+TGG 0.311576 2.4:+4227715 MS.gene85206:CDS
CCACAAGATAAATGTGCTTT+TGG 0.318440 2.4:-4229774 None:intergenic
AAAGGACAAGTGTGGTTAAA+TGG 0.318838 2.4:+4229344 MS.gene85206:CDS
CAGGTATGAGCTTCACATTT+TGG 0.322652 2.4:-4228742 None:intergenic
GAGACTTTCTTCAAGACATT+TGG 0.330421 2.4:-4230272 None:intergenic
CTGGTCTTTATGTTCATCTA+AGG 0.337463 2.4:+4226087 MS.gene85206:CDS
GTTTGCAGGTTTACGGAGTT+TGG 0.340398 2.4:+4227051 MS.gene85206:intron
ACATGGAATGCTGGTGTTCT+TGG 0.357372 2.4:+4228996 MS.gene85206:CDS
GGTACCATGTTCCTCATTCA+TGG 0.357838 2.4:+4229577 MS.gene85206:intron
ACTTCTCAGAAATCCTTCAT+TGG 0.358344 2.4:-4228358 None:intergenic
AATACCTCAGGAGTGCTTCT+TGG 0.360089 2.4:-4225674 None:intergenic
GATGCACCTCTTGATGAATA+TGG 0.363756 2.4:+4227322 MS.gene85206:CDS
AGACAGGCTATTTGAATCTC+AGG 0.368202 2.4:+4226470 MS.gene85206:CDS
GTTTGGTTGAAGTACATTCC+TGG 0.369390 2.4:+4226250 MS.gene85206:CDS
CTATTCACGGTGGACTATCT+TGG 0.380755 2.4:+4228108 MS.gene85206:CDS
TGCATTACAACTTGCCTCCT+TGG 0.383676 2.4:+4227743 MS.gene85206:CDS
ATTGCTACGGCAACCAAAAT+GGG 0.389460 2.4:+4227441 MS.gene85206:CDS
TTGGTTGTGTTTGAAGAATT+GGG 0.390742 2.4:+4229621 MS.gene85206:CDS
ACTGTGTCACCTGAAAATTT+TGG 0.396444 2.4:+4230236 MS.gene85206:CDS
GAAAGCTAAGGAAGGAGGTT+TGG 0.400481 2.4:+4225838 MS.gene85206:CDS
GGACCTATGGAGTATGAAAT+TGG 0.404072 2.4:+4226627 MS.gene85206:CDS
TCGATCAAATTCGCTAGCTT+TGG 0.406768 2.4:+4229816 MS.gene85206:CDS
AGTTATCAGATGCAAACTTC+TGG 0.407166 2.4:+4229729 MS.gene85206:CDS
GTCCTTATGTTTGTGCTGAA+TGG 0.411437 2.4:+4226114 MS.gene85206:CDS
CAAGATAGTCCACCGTGAAT+AGG 0.413215 2.4:-4228107 None:intergenic
CTTTATGTTCATCTAAGGAT+TGG 0.414439 2.4:+4226092 MS.gene85206:CDS
GGGACCTGTCTTGGCAGAAA+TGG 0.415433 2.4:+4229054 MS.gene85206:CDS
TTAGCTTTCTGTATAAGATC+TGG 0.418138 2.4:-4225824 None:intergenic
GTTCTTACAGTGTTATCTGC+AGG 0.421154 2.4:+4228393 MS.gene85206:CDS
CTTCTCAGAAATCCTTCATT+GGG 0.424686 2.4:-4228357 None:intergenic
GTGGAAGGTTCCATCATCAT+TGG 0.435542 2.4:+4225535 MS.gene85206:CDS
TTTATTTAGGTTGGTCTCCA+TGG 0.437798 2.4:+4229164 MS.gene85206:intron
CATTTAGTGTAGGATTTACC+TGG 0.437828 2.4:-4226654 None:intergenic
GAACACGAGTCATCTTCATC+TGG 0.442908 2.4:-4228085 None:intergenic
TTCTCTCGGTGGAAGTTCCT+CGG 0.444564 2.4:+4229205 MS.gene85206:CDS
GTTATTATTATTACTTTGCC+AGG 0.444713 2.4:-4225905 None:intergenic
GCATTCCATGTTTCAAAATG+AGG 0.445741 2.4:-4228984 None:intergenic
AGCAATAAAACTCTCTGAAC+CGG 0.448263 2.4:+4227486 MS.gene85206:CDS
CATTCATGGCTGATACCAAC+TGG 0.453589 2.4:+4229591 MS.gene85206:CDS
CACCCTTGCAGTGTTATAAA+CGG 0.454278 2.4:-4227797 None:intergenic
TCCTCGGTCGAGTGGGTTCA+GGG 0.456499 2.4:+4229221 MS.gene85206:CDS
ATGGTCTCGATGAAGGTAGA+AGG 0.457897 2.4:+4229033 MS.gene85206:CDS
TAAACGGTGTTCTTGCAGTC+AGG 0.459415 2.4:-4227781 None:intergenic
GCCTTGAGTCTTCATTCTCT+CGG 0.459507 2.4:+4229191 MS.gene85206:CDS
AACTGAAAATGCCATGTCTT+CGG 0.461960 2.4:-4227097 None:intergenic
GTTTACGGAGTTTGGAGGTC+CGG 0.462157 2.4:+4227059 MS.gene85206:CDS
GGAATGTACTTCAACCAAAC+AGG 0.469362 2.4:-4226247 None:intergenic
GCACATTTATCTTGTGGCCC+TGG 0.470883 2.4:+4229780 MS.gene85206:CDS
TTGAAATGATCAGGTACAAA+TGG 0.471373 2.4:-4230303 None:intergenic
AAGTGTTGCAGTTGGACTCC+CGG 0.472133 2.4:+4228787 MS.gene85206:CDS
GCAGATATGGCTGTAGGACT+TGG 0.475319 2.4:+4226681 MS.gene85206:CDS
TGGTCCAATAATTATGTCTC+AGG 0.477103 2.4:+4226494 MS.gene85206:CDS
TGGCCTGCTTATAAAGCGTC+CGG 0.479606 2.4:+4229386 MS.gene85206:CDS
TTCCATTCAGCACAAACATA+AGG 0.479771 2.4:-4226116 None:intergenic
ATCACAATAGAAGCCATTGC+AGG 0.479843 2.4:-4226863 None:intergenic
GTCTTACAATACCTTTGAAA+AGG 0.480418 2.4:+4229893 MS.gene85206:CDS
CAAAGATGTGGACAGAAGCT+TGG 0.481859 2.4:+4226914 MS.gene85206:CDS
AAGGTAGAAGGGACCTGTCT+TGG 0.482087 2.4:+4229045 MS.gene85206:CDS
TGTGGAGTACCACAAGTAAT+CGG 0.489635 2.4:-4228222 None:intergenic
GCAGATAACACTGTAAGAAC+AGG 0.491038 2.4:-4228390 None:intergenic
CGAGACCATTTAATGTAATC+GGG 0.491861 2.4:-4229019 None:intergenic
GTTGCAAGATTTATACAGAA+AGG 0.492357 2.4:+4227117 MS.gene85206:CDS
TGAAAATGAATATGGACCTA+TGG 0.492558 2.4:+4226614 MS.gene85206:CDS
AGGTAAATCCTACACTAAAT+GGG 0.494074 2.4:+4226656 MS.gene85206:CDS
GCTGAACTTACAACAGGATC+AGG 0.496896 2.4:-4226744 None:intergenic
GCTTTAGACATGGGAAGTAT+GGG 0.497936 2.4:+4229320 MS.gene85206:CDS
TCGGCAGGTCGGTGAGGTAC+CGG 0.502753 2.4:-4227078 None:intergenic
TTCGTCAATAGTCAGCTGTC+AGG 0.502839 2.4:+4228432 MS.gene85206:CDS
GTCCCGGACGCTTTATAAGC+AGG 0.508646 2.4:-4229389 None:intergenic
TTCTTACAGTGTTATCTGCA+GGG 0.511747 2.4:+4228394 MS.gene85206:CDS
ATCATTTATCAATTATTACA+TGG 0.512390 2.4:+4227143 MS.gene85206:CDS
TTTGGTGAAGTTCATAAAGT+TGG 0.514157 2.4:+4226055 MS.gene85206:CDS
ACCAAAATGGGGTCATCTGA+AGG 0.518131 2.4:+4227453 MS.gene85206:CDS
AGTGCTTCTTGGATAATGAA+TGG 0.519114 2.4:-4225663 None:intergenic
ATAGTTTCCGATCCGTGTAA+TGG 0.519802 2.4:-4227530 None:intergenic
GAATTGGGCGGTGACCCTAA+TGG 0.520205 2.4:+4229636 MS.gene85206:CDS
ATGACTCGTGTTCCTATTCA+CGG 0.520311 2.4:+4228095 MS.gene85206:CDS
AAGACCATTTCTGCCAAGAC+AGG 0.521298 2.4:-4229058 None:intergenic
GACATGGGAAGTATGGGAAA+AGG 0.521616 2.4:+4229326 MS.gene85206:CDS
ATTATTACTTTGCCAGGTGA+AGG 0.522232 2.4:-4225899 None:intergenic
AATGAAGGATTTCTGAGAAG+TGG 0.525796 2.4:+4228360 MS.gene85206:CDS
AAGTTTCCACAAGATCCTAC+TGG 0.526632 2.4:-4229843 None:intergenic
GTGGCGAGGCTTCTCAAAGA+TGG 0.529015 2.4:+4229468 MS.gene85206:CDS
AGCAGAAGAACCAATGATGA+TGG 0.529803 2.4:-4225545 None:intergenic
GGACAGAAGCTTGGACTGGC+TGG 0.530087 2.4:+4226923 MS.gene85206:CDS
GGTACTCCAGTAGGATCTTG+TGG 0.530178 2.4:+4229837 MS.gene85206:CDS
GAGTATGAAATTGGTGCTCC+AGG 0.530719 2.4:+4226636 MS.gene85206:CDS
ACATTAAATGGTCTCGATGA+AGG 0.531878 2.4:+4229026 MS.gene85206:CDS
CATGTGTTTAAATCGAAGTC+GGG 0.531921 2.4:+4227655 MS.gene85206:CDS
TGCAGGTTTACGGAGTTTGG+AGG 0.532601 2.4:+4227054 MS.gene85206:intron
CAAAATGTGAAGCTCATACC+TGG 0.534579 2.4:+4228743 MS.gene85206:CDS
GAAAATGCCATGTCTTCGGC+AGG 0.539055 2.4:-4227093 None:intergenic
CTGCTCTAGTAGACCGGTCA+TGG 0.539262 2.4:-4228177 None:intergenic
CTTCAAGTTCATAATGTGGA+AGG 0.540664 2.4:+4225520 None:intergenic
TGTTTACCATATTCATCAAG+AGG 0.544097 2.4:-4227328 None:intergenic
CTTTATAAGCAGGCCAGTAA+CGG 0.545557 2.4:-4229379 None:intergenic
GTGGAAGTTCCTCGGTCGAG+TGG 0.550654 2.4:+4229213 MS.gene85206:CDS
CATTCCATGTTTCAAAATGA+GGG 0.550777 2.4:-4228983 None:intergenic
TCTCTTCTAAGTGTTGCAGT+TGG 0.551688 2.4:+4228779 MS.gene85206:CDS
GATAGTTCATTCACCATGAC+CGG 0.554175 2.4:+4228164 MS.gene85206:CDS
TCTTGTGGAAACTTTCATGA+AGG 0.554418 2.4:+4229852 MS.gene85206:CDS
CTTCCCATGTCTAAAGCAAA+CGG 0.559247 2.4:-4229314 None:intergenic
TGGAAGTTCCTCGGTCGAGT+GGG 0.563498 2.4:+4229214 MS.gene85206:CDS
TTGGCAGAAATGGTCTTACA+AGG 0.564072 2.4:+4229064 MS.gene85206:CDS
GCTAGCTTTGGTACTCCAGT+AGG 0.567006 2.4:+4229828 MS.gene85206:CDS
TTGTTGTTTCAGAATTGTGT+TGG 0.567563 2.4:+4230194 MS.gene85206:intron
GAGATTTAACCGATTACTTG+TGG 0.569217 2.4:+4228213 MS.gene85206:CDS
ATAAAGTTGGTGCAGCAAGC+TGG 0.570622 2.4:+4226068 MS.gene85206:CDS
CCAAAAGCACATTTATCTTG+TGG 0.571229 2.4:+4229774 MS.gene85206:CDS
TCATGTGTTTAAATCGAAGT+CGG 0.572762 2.4:+4227654 MS.gene85206:CDS
GTTTAACTGCTCTAGTAGAC+CGG 0.575697 2.4:-4228183 None:intergenic
TCACCGACCTGCCGAAGACA+TGG 0.575969 2.4:+4227086 MS.gene85206:CDS
TCATAGCTTGTAGCAATGAA+AGG 0.576212 2.4:-4227295 None:intergenic
TGCACCGTTTGCTTTAGACA+TGG 0.576992 2.4:+4229310 MS.gene85206:CDS
TCCTGTGTACAGGATTGCTA+CGG 0.577884 2.4:+4227428 MS.gene85206:intron
TTGATATGATGAAAGCAGAC+AGG 0.577949 2.4:+4226454 MS.gene85206:CDS
ACAACCAATAAATTTCCAGT+TGG 0.578032 2.4:-4229606 None:intergenic
GTTGTGATTGATCCCAATGA+AGG 0.582958 2.4:+4228345 MS.gene85206:CDS
GATCCTACCATTACACGGAT+CGG 0.585240 2.4:+4227523 MS.gene85206:CDS
TCACCATTAATGGACAAAGA+AGG 0.585727 2.4:+4225624 MS.gene85206:CDS
TGCGTAGTCACAGTTATCAC+AGG 0.585886 2.4:-4229411 None:intergenic
GGCCTGCTTATAAAGCGTCC+GGG 0.586163 2.4:+4229387 MS.gene85206:CDS
AATGGACATGAACCTTCACC+TGG 0.589322 2.4:+4225887 MS.gene85206:CDS
ACACCGTTTATAACACTGCA+AGG 0.590454 2.4:+4227794 MS.gene85206:CDS
GTACAGATTAACACCTGCAA+TGG 0.591387 2.4:+4226850 MS.gene85206:intron
GCACATGATCCACGGAACTC+CGG 0.591942 2.4:-4226706 None:intergenic
GCACCAATTTCATACTCCAT+AGG 0.593297 2.4:-4226630 None:intergenic
TTTGGCTAAAAGTTAGCTTG+GGG 0.594034 2.4:-4228724 None:intergenic
CTGGAGATCCTACCATTACA+CGG 0.599160 2.4:+4227518 MS.gene85206:CDS
AGGATTTCTGAGAAGTGGAA+AGG 0.600566 2.4:+4228365 MS.gene85206:CDS
GACAGGCTATTTGAATCTCA+GGG 0.601333 2.4:+4226471 MS.gene85206:CDS
AGATCTTATACAGAAAGCTA+AGG 0.602448 2.4:+4225826 MS.gene85206:CDS
GTTACTGTAACACAGAATGT+TGG 0.602653 2.4:+4228960 MS.gene85206:intron
AACACGAGTCATCTTCATCT+GGG 0.604554 2.4:-4228084 None:intergenic
ATGTGGACAGAAGCTTGGAC+TGG 0.605181 2.4:+4226919 MS.gene85206:CDS
GCACCGTTTGCTTTAGACAT+GGG 0.605886 2.4:+4229311 MS.gene85206:CDS
AATGAATGGATCCAGAAATG+AGG 0.605975 2.4:-4225649 None:intergenic
ACCGAGAGAATGAAGACTCA+AGG 0.605997 2.4:-4229192 None:intergenic
CTTATACAGAAAGCTAAGGA+AGG 0.606000 2.4:+4225830 MS.gene85206:CDS
TGGTCTCGATGAAGGTAGAA+GGG 0.607950 2.4:+4229034 MS.gene85206:CDS
TTCTTCAAGACATTTGGACA+TGG 0.608848 2.4:-4230266 None:intergenic
AGGATTACAAACCAAAGATG+TGG 0.608975 2.4:+4226902 MS.gene85206:CDS
GTCACAGTTATCACAGGTCC+CGG 0.609764 2.4:-4229405 None:intergenic
ATACAGAAAGCTAAGGAAGG+AGG 0.610912 2.4:+4225833 MS.gene85206:CDS
ATCTGCTGCCCATTTAGTGT+AGG 0.611477 2.4:-4226664 None:intergenic
GTTGGTATCAGCCATGAATG+AGG 0.611609 2.4:-4229588 None:intergenic
CTTGAAGAAAGTCTCGGTCG+AGG 0.612254 2.4:+4230280 MS.gene85206:CDS
TCTTGCTTGCACATGATCCA+CGG 0.613454 2.4:-4226714 None:intergenic
CCCCTGAACCCACTCGACCG+AGG 0.614563 2.4:-4229222 None:intergenic
GGATCTCCAGAAATTAAAGC+CGG 0.615458 2.4:-4227505 None:intergenic
TTTCCGATCCGTGTAATGGT+AGG 0.617396 2.4:-4227526 None:intergenic
GCAAGATTTATACAGAAAGG+AGG 0.618225 2.4:+4227120 MS.gene85206:CDS
TGGGCAGCAGATATGGCTGT+AGG 0.619879 2.4:+4226675 MS.gene85206:CDS
TTGAGTCTTCATTCTCTCGG+TGG 0.621166 2.4:+4229194 MS.gene85206:CDS
AAATGTCTTGAAGAAAGTCT+CGG 0.621445 2.4:+4230274 MS.gene85206:CDS
CCTCGGTCGAGTGGGTTCAG+GGG 0.627821 2.4:+4229222 MS.gene85206:CDS
GAATGAACTATCATCAGTAG+AGG 0.630435 2.4:-4228153 None:intergenic
ATGGCTGTAGGACTTGGTAC+CGG 0.637207 2.4:+4226687 MS.gene85206:CDS
ATGTCTTCGGCAGGTCGGTG+AGG 0.645166 2.4:-4227084 None:intergenic
TCAGTTCTAAAACTGATACC+AGG 0.645739 2.4:-4226268 None:intergenic
TGTGATAACTGTGACTACGC+AGG 0.651220 2.4:+4229413 MS.gene85206:CDS
GACTTGGTACCGGAGTTCCG+TGG 0.652078 2.4:+4226697 MS.gene85206:CDS
ATGCCATGTCTTCGGCAGGT+CGG 0.653584 2.4:-4227089 None:intergenic
GGAAGAATGCTTATAGACCA+AGG 0.658066 2.4:-4227760 None:intergenic
ATGTAGAAGTAACTGTGGCG+AGG 0.658652 2.4:+4229454 MS.gene85206:CDS
AATAAATGTAGAAGTAACTG+TGG 0.658775 2.4:+4229449 MS.gene85206:CDS
GTATGGGAAAAGGACAAGTG+TGG 0.663046 2.4:+4229336 MS.gene85206:CDS
CACCGTTTATAACACTGCAA+GGG 0.667596 2.4:+4227795 MS.gene85206:CDS
TTATCCAAGAAGCACTCCTG+AGG 0.679239 2.4:+4225670 MS.gene85206:CDS
TTGCTACGGCAACCAAAATG+GGG 0.680712 2.4:+4227442 MS.gene85206:CDS
GAAGACTCAAGGCTTCACCA+TGG 0.682047 2.4:-4229181 None:intergenic
TGTTCATTTCAGTATCATGG+AGG 0.682153 2.4:+4227244 MS.gene85206:intron
TGTTGGACAGAACTCATGCA+AGG 0.683554 2.4:+4230211 MS.gene85206:CDS
ACGGATCGGAAACTATCAAG+AGG 0.690937 2.4:+4227537 MS.gene85206:CDS
TCAGCCATGAATGAGGAACA+TGG 0.708195 2.4:-4229581 None:intergenic
TATGTGCAGATATTTATGAG+TGG 0.736896 2.4:+4229691 MS.gene85206:CDS
ACTCGTGTTCCTATTCACGG+TGG 0.752987 2.4:+4228098 MS.gene85206:CDS
AGGCTATTTGAATCTCAGGG+TGG 0.765466 2.4:+4226474 MS.gene85206:CDS
GTTGTGTTTGAAGAATTGGG+CGG 0.788119 2.4:+4229624 MS.gene85206:CDS
AGAATGCTTATAGACCAAGG+AGG 0.819272 2.4:-4227757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAAATAATCATTTTTTTT+TGG + chr2.4:4226004-4226023 MS.gene85206:intron 10.0%
!!! TTAAAATTACTGTTTTATTT+AGG + chr2.4:4229151-4229170 MS.gene85206:intron 10.0%
!!! TTTTTTTATTTGAATAAGAA+AGG - chr2.4:4228605-4228624 None:intergenic 10.0%
!! AAAAACAAAAACTAATTAGA+AGG - chr2.4:4226384-4226403 None:intergenic 15.0%
!! AAAATATGTATAGTTCTTAT+TGG - chr2.4:4227379-4227398 None:intergenic 15.0%
!! AGTTTATCAATATTTATCAT+CGG - chr2.4:4229536-4229555 None:intergenic 15.0%
!! ATATTATATAATAATACCTC+AGG - chr2.4:4225689-4225708 None:intergenic 15.0%
!! ATCATTTATCAATTATTACA+TGG + chr2.4:4227143-4227162 MS.gene85206:CDS 15.0%
!! TTGAAGTAAAATAGTTTATT+CGG - chr2.4:4228634-4228653 None:intergenic 15.0%
!!! AAAATTTCATTATTTTCCTT+CGG - chr2.4:4227934-4227953 None:intergenic 15.0%
!!! AGATTTTGGAATTTTAATTT+TGG - chr2.4:4228040-4228059 None:intergenic 15.0%
!!! ATATTTTATACACTTAAGTA+GGG + chr2.4:4227392-4227411 MS.gene85206:intron 15.0%
!!! ATTTGCTTAATTGATTTTTA+GGG + chr2.4:4226219-4226238 MS.gene85206:intron 15.0%
!! ACTGAAAATATTACCTTAAA+TGG - chr2.4:4226301-4226320 None:intergenic 20.0%
!! ACTGAAATGAACAAAATAAT+GGG - chr2.4:4227237-4227256 None:intergenic 20.0%
!! ATCTGATAACTTATAAGATT+TGG - chr2.4:4229720-4229739 None:intergenic 20.0%
!! ATGTAGATTGAAAATGAATA+TGG + chr2.4:4226606-4226625 MS.gene85206:intron 20.0%
!! TAACTAAAAAGATTCCATTA+GGG - chr2.4:4229653-4229672 None:intergenic 20.0%
!! TACTGAAATGAACAAAATAA+TGG - chr2.4:4227238-4227257 None:intergenic 20.0%
!! TTGATAAACTAATCACTAAA+TGG + chr2.4:4229546-4229565 MS.gene85206:intron 20.0%
!!! AATATTTTTGCCAAAAAGAT+AGG - chr2.4:4226167-4226186 None:intergenic 20.0%
!!! AATTACTGTTTTATTTAGGT+TGG + chr2.4:4229155-4229174 MS.gene85206:intron 20.0%
!!! CATATTTTATACACTTAAGT+AGG + chr2.4:4227391-4227410 MS.gene85206:intron 20.0%
!!! GATTTGCTTAATTGATTTTT+AGG + chr2.4:4226218-4226237 MS.gene85206:intron 20.0%
!!! GCTCTAAAATAAAATCTTTT+AGG + chr2.4:4230094-4230113 MS.gene85206:intron 20.0%
!!! TTTGCTTAATTGATTTTTAG+GGG + chr2.4:4226220-4226239 MS.gene85206:intron 20.0%
!!! TTTTATTTACATGATCTTGT+TGG + chr2.4:4227967-4227986 MS.gene85206:intron 20.0%
! AAATTCCAAAATCTCTTTAC+AGG + chr2.4:4228046-4228065 MS.gene85206:intron 25.0%
! AAGTGACAATCAAATACAAA+TGG - chr2.4:4230146-4230165 None:intergenic 25.0%
! AATAAATGTAGAAGTAACTG+TGG + chr2.4:4229449-4229468 MS.gene85206:CDS 25.0%
! AATCACTAAATGGTAATTTC+AGG + chr2.4:4229556-4229575 MS.gene85206:intron 25.0%
! AATGATCTGACAATTATGAT+CGG - chr2.4:4230022-4230041 None:intergenic 25.0%
! AGTTCATGATTCAGATAAAT+CGG - chr2.4:4228889-4228908 None:intergenic 25.0%
! ATATATAGTTCCTGATCAAA+AGG - chr2.4:4228690-4228709 None:intergenic 25.0%
! CCAAGTTCAATACTAAAAAA+TGG - chr2.4:4227214-4227233 None:intergenic 25.0%
! CTAACTAAAAAGATTCCATT+AGG - chr2.4:4229654-4229673 None:intergenic 25.0%
! GTTATTATTATTACTTTGCC+AGG - chr2.4:4225908-4225927 None:intergenic 25.0%
! TACTTGGAATGAATATATCT+AGG + chr2.4:4228539-4228558 MS.gene85206:intron 25.0%
! TGATACATAGTAACAATACT+TGG + chr2.4:4228523-4228542 MS.gene85206:intron 25.0%
! TTGCATTTATCTCATTCTTA+TGG - chr2.4:4226981-4227000 None:intergenic 25.0%
!! AAGGTACTAATCAATGAAAA+GGG - chr2.4:4226365-4226384 None:intergenic 25.0%
!! TGAAACAACAAAATCACTTT+TGG - chr2.4:4230185-4230204 None:intergenic 25.0%
!! TGATTATTTCTCTCCAAATA+AGG + chr2.4:4226882-4226901 MS.gene85206:CDS 25.0%
!! TGTGATTTGTATAACTAAGT+TGG + chr2.4:4225774-4225793 MS.gene85206:intron 25.0%
!! TTGCATTTGAAACTTCATTA+TGG - chr2.4:4226415-4226434 None:intergenic 25.0%
!! TTTGTTCATATTTTCAGATG+TGG + chr2.4:4225801-4225820 MS.gene85206:intron 25.0%
!! TTTTGATCAGGAACTATATA+TGG + chr2.4:4228689-4228708 MS.gene85206:intron 25.0%
!! TTTTGTTCATTTCAGTATCA+TGG + chr2.4:4227241-4227260 MS.gene85206:intron 25.0%
!!! ATGAATTTTTGAGCAAAATC+AGG - chr2.4:4229132-4229151 None:intergenic 25.0%
!!! ATGGAATCTTTTTAGTTAGA+AGG + chr2.4:4229655-4229674 MS.gene85206:CDS 25.0%
!!! CCATTTTTTAGTATTGAACT+TGG + chr2.4:4227211-4227230 MS.gene85206:intron 25.0%
!!! TATAGTCTTATTTAGCAAAG+TGG + chr2.4:4227900-4227919 MS.gene85206:intron 25.0%
!!! TGATTCAGACTTATGTTTTT+TGG + chr2.4:4225864-4225883 MS.gene85206:CDS 25.0%
!!! TGGAATCTTTTTAGTTAGAA+GGG + chr2.4:4229656-4229675 MS.gene85206:CDS 25.0%
!!! TGTTACAAAGCATTTTAGAT+AGG - chr2.4:4227597-4227616 None:intergenic 25.0%
!!! TTGGTGTAGTATTATTTTGA+GGG + chr2.4:4226023-4226042 MS.gene85206:intron 25.0%
!!! TTTGGTGTAGTATTATTTTG+AGG + chr2.4:4226022-4226041 MS.gene85206:intron 25.0%
!!! TTTGGTTTGTAATCCTTATT+TGG - chr2.4:4226898-4226917 None:intergenic 25.0%
AAATGTCTTGAAGAAAGTCT+CGG + chr2.4:4230274-4230293 MS.gene85206:CDS 30.0%
AAATTTGATGTATGCTCTTG+AGG + chr2.4:4228497-4228516 MS.gene85206:intron 30.0%
AACCTAAGAAATAAGAAGCA+AGG - chr2.4:4226957-4226976 None:intergenic 30.0%
AACTGACAATGATCCATTTA+AGG + chr2.4:4226285-4226304 MS.gene85206:CDS 30.0%
ACAACCAATAAATTTCCAGT+TGG - chr2.4:4229609-4229628 None:intergenic 30.0%
AGAATCTTTAACAGTGCTTA+AGG - chr2.4:4226334-4226353 None:intergenic 30.0%
AGATCTTATACAGAAAGCTA+AGG + chr2.4:4225826-4225845 MS.gene85206:CDS 30.0%
AGGTAAATCCTACACTAAAT+GGG + chr2.4:4226656-4226675 MS.gene85206:CDS 30.0%
ATCTTTAATCATTACTGTGC+AGG + chr2.4:4227630-4227649 MS.gene85206:intron 30.0%
ATTGGTTGTGTTTGAAGAAT+TGG + chr2.4:4229620-4229639 MS.gene85206:CDS 30.0%
CATTCCATGTTTCAAAATGA+GGG - chr2.4:4228986-4229005 None:intergenic 30.0%
CTTTATGTTCATCTAAGGAT+TGG + chr2.4:4226092-4226111 MS.gene85206:CDS 30.0%
GATACCAACTGGAAATTTAT+TGG + chr2.4:4229602-4229621 MS.gene85206:CDS 30.0%
GATGAATATGGTAAACACAA+AGG + chr2.4:4227334-4227353 MS.gene85206:intron 30.0%
GTTGCAAGATTTATACAGAA+AGG + chr2.4:4227117-4227136 MS.gene85206:CDS 30.0%
TAAACCTGCAAACATAAAAG+AGG - chr2.4:4227044-4227063 None:intergenic 30.0%
TATGTGCAGATATTTATGAG+TGG + chr2.4:4229691-4229710 MS.gene85206:CDS 30.0%
TCATGTGTTTAAATCGAAGT+CGG + chr2.4:4227654-4227673 MS.gene85206:CDS 30.0%
TCGAGACCATTTAATGTAAT+CGG - chr2.4:4229023-4229042 None:intergenic 30.0%
TCTACCTGAGACATAATTAT+TGG - chr2.4:4226501-4226520 None:intergenic 30.0%
TCTACTCAATCACATATCTT+TGG - chr2.4:4227857-4227876 None:intergenic 30.0%
TGAAAATGAATATGGACCTA+TGG + chr2.4:4226614-4226633 MS.gene85206:CDS 30.0%
TGTTTACCATATTCATCAAG+AGG - chr2.4:4227331-4227350 None:intergenic 30.0%
TTAACTCTTTGCAGTACTAA+AGG + chr2.4:4230072-4230091 MS.gene85206:intron 30.0%
TTAGAGGCTAAAATCATTGA+AGG - chr2.4:4226813-4226832 None:intergenic 30.0%
TTGGTTGTGTTTGAAGAATT+GGG + chr2.4:4229621-4229640 MS.gene85206:CDS 30.0%
TTTGGTGAAGTTCATAAAGT+TGG + chr2.4:4226055-4226074 MS.gene85206:CDS 30.0%
! AATTTAATGTGCTGTTGTGT+AGG + chr2.4:4227184-4227203 MS.gene85206:intron 30.0%
! ATTTAATGTGCTGTTGTGTA+GGG + chr2.4:4227185-4227204 MS.gene85206:intron 30.0%
! CTATAGCAATACCTTTTCAA+AGG - chr2.4:4229907-4229926 None:intergenic 30.0%
! CTTTTATGTTTGCAGGTTTA+CGG + chr2.4:4227044-4227063 MS.gene85206:intron 30.0%
! GTCTTACAATACCTTTGAAA+AGG + chr2.4:4229893-4229912 MS.gene85206:CDS 30.0%
! TATCATGGAGGAACAAATTT+TGG + chr2.4:4227256-4227275 MS.gene85206:CDS 30.0%
! TCTAAAGCTATCACCATTAA+TGG + chr2.4:4225614-4225633 MS.gene85206:CDS 30.0%
! TGATGACTCATCATTCATTT+TGG + chr2.4:4228278-4228297 MS.gene85206:intron 30.0%
! TGGTTAAATGGACAGAATTT+TGG + chr2.4:4229356-4229375 MS.gene85206:CDS 30.0%
! TTAGCTTTCTGTATAAGATC+TGG - chr2.4:4225827-4225846 None:intergenic 30.0%
! TTGTTCCTTTCCTATCTTTT+TGG + chr2.4:4226154-4226173 MS.gene85206:intron 30.0%
! TTTGTGCTGAATGGAATTTT+GGG + chr2.4:4226123-4226142 MS.gene85206:CDS 30.0%
! TTTTGCCAAAAAGATAGGAA+AGG - chr2.4:4226162-4226181 None:intergenic 30.0%
!! GAAGGTACTAATCAATGAAA+AGG - chr2.4:4226366-4226385 None:intergenic 30.0%
!! TAATTTTGTTTCCTGTGTAC+AGG + chr2.4:4227418-4227437 MS.gene85206:intron 30.0%
!! TTGTTGTTTCAGAATTGTGT+TGG + chr2.4:4230194-4230213 MS.gene85206:intron 30.0%
!! TTTTGGCTAAAAGTTAGCTT+GGG - chr2.4:4228728-4228747 None:intergenic 30.0%
!!! ATTTTGGCTAAAAGTTAGCT+TGG - chr2.4:4228729-4228748 None:intergenic 30.0%
!!! CAGACTTATGTTTTTTGGAA+TGG + chr2.4:4225869-4225888 MS.gene85206:CDS 30.0%
!!! TGGTGTAGTATTATTTTGAG+GGG + chr2.4:4226024-4226043 MS.gene85206:intron 30.0%
AAAGGACAAGTGTGGTTAAA+TGG + chr2.4:4229344-4229363 MS.gene85206:CDS 35.0%
AACTGAAAATGCCATGTCTT+CGG - chr2.4:4227100-4227119 None:intergenic 35.0%
AATGAATGGATCCAGAAATG+AGG - chr2.4:4225652-4225671 None:intergenic 35.0%
AATTCAGCTGAACTTACAAC+AGG - chr2.4:4226753-4226772 None:intergenic 35.0%
ACATTAAATGGTCTCGATGA+AGG + chr2.4:4229026-4229045 MS.gene85206:CDS 35.0%
ACTTCTCAGAAATCCTTCAT+TGG - chr2.4:4228361-4228380 None:intergenic 35.0%
AGCAATAAAACTCTCTGAAC+CGG + chr2.4:4227486-4227505 MS.gene85206:CDS 35.0%
AGGATTACAAACCAAAGATG+TGG + chr2.4:4226902-4226921 MS.gene85206:CDS 35.0%
AGTGCTTCTTGGATAATGAA+TGG - chr2.4:4225666-4225685 None:intergenic 35.0%
AGTTATCAGATGCAAACTTC+TGG + chr2.4:4229729-4229748 MS.gene85206:CDS 35.0%
ATCACAACACTAGCAAAAGA+AGG - chr2.4:4228333-4228352 None:intergenic 35.0%
ATCTTTCTGTTCATTGCAGA+TGG - chr2.4:4228002-4228021 None:intergenic 35.0%
ATTATTACTTTGCCAGGTGA+AGG - chr2.4:4225902-4225921 None:intergenic 35.0%
CAGGTAAATCCTACACTAAA+TGG + chr2.4:4226655-4226674 MS.gene85206:CDS 35.0%
CATGTGTTTAAATCGAAGTC+GGG + chr2.4:4227655-4227674 MS.gene85206:CDS 35.0%
CATTTAGTGTAGGATTTACC+TGG - chr2.4:4226657-4226676 None:intergenic 35.0%
CGAGACCATTTAATGTAATC+GGG - chr2.4:4229022-4229041 None:intergenic 35.0%
CTTATACAGAAAGCTAAGGA+AGG + chr2.4:4225830-4225849 MS.gene85206:CDS 35.0%
CTTCTCAGAAATCCTTCATT+GGG - chr2.4:4228360-4228379 None:intergenic 35.0%
GAACAGAAAGATATTCCTCT+CGG + chr2.4:4228010-4228029 MS.gene85206:intron 35.0%
GAATGAACTATCATCAGTAG+AGG - chr2.4:4228156-4228175 None:intergenic 35.0%
GAGACTTTCTTCAAGACATT+TGG - chr2.4:4230275-4230294 None:intergenic 35.0%
GAGATTTAACCGATTACTTG+TGG + chr2.4:4228213-4228232 MS.gene85206:CDS 35.0%
GATCCTTCTTTGTCCATTAA+TGG - chr2.4:4225630-4225649 None:intergenic 35.0%
GCAAGATTTATACAGAAAGG+AGG + chr2.4:4227120-4227139 MS.gene85206:CDS 35.0%
GCATTCCATGTTTCAAAATG+AGG - chr2.4:4228987-4229006 None:intergenic 35.0%
GTTACTGTAACACAGAATGT+TGG + chr2.4:4228960-4228979 MS.gene85206:intron 35.0%
GTTGTTTATTACTCACTCTG+TGG - chr2.4:4228243-4228262 None:intergenic 35.0%
TCACAACACTAGCAAAAGAA+GGG - chr2.4:4228332-4228351 None:intergenic 35.0%
TCCAAAATCTCTTTACAGGT+TGG + chr2.4:4228050-4228069 MS.gene85206:intron 35.0%
TCTTGTGGAAACTTTCATGA+AGG + chr2.4:4229852-4229871 MS.gene85206:CDS 35.0%
TGGTCCAATAATTATGTCTC+AGG + chr2.4:4226494-4226513 MS.gene85206:CDS 35.0%
TGTTCATTTCAGTATCATGG+AGG + chr2.4:4227244-4227263 MS.gene85206:intron 35.0%
TTACTGTAGAATGAGCTTCA+GGG + chr2.4:4225718-4225737 MS.gene85206:intron 35.0%
TTCCATTCAGCACAAACATA+AGG - chr2.4:4226119-4226138 None:intergenic 35.0%
TTCTTACAGTGTTATCTGCA+GGG + chr2.4:4228394-4228413 MS.gene85206:CDS 35.0%
TTCTTCAAGACATTTGGACA+TGG - chr2.4:4230269-4230288 None:intergenic 35.0%
TTGATATGATGAAAGCAGAC+AGG + chr2.4:4226454-4226473 MS.gene85206:CDS 35.0%
! AATGAAGGATTTCTGAGAAG+TGG + chr2.4:4228360-4228379 MS.gene85206:CDS 35.0%
! ACCAACCTGTAAAGAGATTT+TGG - chr2.4:4228054-4228073 None:intergenic 35.0%
! ACGTTTTACGTCGAAATTAG+AGG - chr2.4:4226829-4226848 None:intergenic 35.0%
! ACTGTGTCACCTGAAAATTT+TGG + chr2.4:4230236-4230255 MS.gene85206:CDS 35.0%
! AGAGATATTTTGTTGACACC+AGG - chr2.4:4228764-4228783 None:intergenic 35.0%
! ATCGATGATATTTTCTGTCC+AGG - chr2.4:4229801-4229820 None:intergenic 35.0%
! CCAAAAGCACATTTATCTTG+TGG + chr2.4:4229774-4229793 MS.gene85206:CDS 35.0%
! CCACAAGATAAATGTGCTTT+TGG - chr2.4:4229777-4229796 None:intergenic 35.0%
! CTGGTCTTTATGTTCATCTA+AGG + chr2.4:4226087-4226106 MS.gene85206:CDS 35.0%
! GTTTGTGCTGAATGGAATTT+TGG + chr2.4:4226122-4226141 MS.gene85206:CDS 35.0%
! TCACCATTAATGGACAAAGA+AGG + chr2.4:4225624-4225643 MS.gene85206:CDS 35.0%
! TCATAGCTTGTAGCAATGAA+AGG - chr2.4:4227298-4227317 None:intergenic 35.0%
! TCGATGATATTTTCTGTCCA+GGG - chr2.4:4229800-4229819 None:intergenic 35.0%
! TGCCTTGCTTCTTATTTCTT+AGG + chr2.4:4226952-4226971 MS.gene85206:intron 35.0%
! TGTTCCTCTTTTATGTTTGC+AGG + chr2.4:4227037-4227056 MS.gene85206:intron 35.0%
! TTTGGCTAAAAGTTAGCTTG+GGG - chr2.4:4228727-4228746 None:intergenic 35.0%
!! ACAAATTTTGGTAGAACTGC+TGG + chr2.4:4227268-4227287 MS.gene85206:CDS 35.0%
!! TCAGTTCTAAAACTGATACC+AGG - chr2.4:4226271-4226290 None:intergenic 35.0%
!! TTTAATTTTGGATCTCCGAG+AGG - chr2.4:4228028-4228047 None:intergenic 35.0%
!! TTTATTTAGGTTGGTCTCCA+TGG + chr2.4:4229164-4229183 MS.gene85206:intron 35.0%
!! TTTTGAGGGGAACTATGATT+TGG + chr2.4:4226037-4226056 MS.gene85206:CDS 35.0%
!! TTTTTAGGGGTTTTCCTGTT+TGG + chr2.4:4226233-4226252 MS.gene85206:intron 35.0%
!!! CATTTTGAAACATGGAATGC+TGG + chr2.4:4228987-4229006 MS.gene85206:CDS 35.0%
!!! GTAGTTTTGTACCAAGTCAA+TGG - chr2.4:4229269-4229288 None:intergenic 35.0%
AACACGAGTCATCTTCATCT+GGG - chr2.4:4228087-4228106 None:intergenic 40.0%
AAGGAGAGTAACGATGTTAG+CGG - chr2.4:4228671-4228690 None:intergenic 40.0%
AAGTTTCCACAAGATCCTAC+TGG - chr2.4:4229846-4229865 None:intergenic 40.0%
ACAACACTAGCAAAAGAAGG+GGG - chr2.4:4228330-4228349 None:intergenic 40.0%
ACACCGTTTATAACACTGCA+AGG + chr2.4:4227794-4227813 MS.gene85206:CDS 40.0%
AGAATGCTTATAGACCAAGG+AGG - chr2.4:4227760-4227779 None:intergenic 40.0%
AGACAGGCTATTTGAATCTC+AGG + chr2.4:4226470-4226489 MS.gene85206:CDS 40.0%
AGCAGAAGAACCAATGATGA+TGG - chr2.4:4225548-4225567 None:intergenic 40.0%
ATACAGAAAGCTAAGGAAGG+AGG + chr2.4:4225833-4225852 MS.gene85206:CDS 40.0%
ATAGTTTCCGATCCGTGTAA+TGG - chr2.4:4227533-4227552 None:intergenic 40.0%
ATCACAATAGAAGCCATTGC+AGG - chr2.4:4226866-4226885 None:intergenic 40.0%
ATCGGAAACTATCAAGAGGT+GGG + chr2.4:4227541-4227560 MS.gene85206:intron 40.0%
ATGACTCGTGTTCCTATTCA+CGG + chr2.4:4228095-4228114 MS.gene85206:CDS 40.0%
ATTGCTACGGCAACCAAAAT+GGG + chr2.4:4227441-4227460 MS.gene85206:CDS 40.0%
CAAAATGTGAAGCTCATACC+TGG + chr2.4:4228743-4228762 MS.gene85206:CDS 40.0%
CAAAGAAGGATCCTCATTTC+TGG + chr2.4:4225638-4225657 MS.gene85206:CDS 40.0%
CACAACACTAGCAAAAGAAG+GGG - chr2.4:4228331-4228350 None:intergenic 40.0%
CACCCTTGCAGTGTTATAAA+CGG - chr2.4:4227800-4227819 None:intergenic 40.0%
CACCGTTTATAACACTGCAA+GGG + chr2.4:4227795-4227814 MS.gene85206:CDS 40.0%
CTGCTAGCATGTTCTCTTAT+TGG + chr2.4:4225563-4225582 MS.gene85206:CDS 40.0%
CTTGGCCCGATTACATTAAA+TGG + chr2.4:4229014-4229033 MS.gene85206:CDS 40.0%
CTTTATAAGCAGGCCAGTAA+CGG - chr2.4:4229382-4229401 None:intergenic 40.0%
GACAGGCTATTTGAATCTCA+GGG + chr2.4:4226471-4226490 MS.gene85206:CDS 40.0%
GATAGTTCATTCACCATGAC+CGG + chr2.4:4228164-4228183 MS.gene85206:CDS 40.0%
GATGCACCTCTTGATGAATA+TGG + chr2.4:4227322-4227341 MS.gene85206:CDS 40.0%
GCACCAATTTCATACTCCAT+AGG - chr2.4:4226633-4226652 None:intergenic 40.0%
GCAGATAACACTGTAAGAAC+AGG - chr2.4:4228393-4228412 None:intergenic 40.0%
GGAAGAATGCTTATAGACCA+AGG - chr2.4:4227763-4227782 None:intergenic 40.0%
GGAATGTACTTCAACCAAAC+AGG - chr2.4:4226250-4226269 None:intergenic 40.0%
GGACCTATGGAGTATGAAAT+TGG + chr2.4:4226627-4226646 MS.gene85206:CDS 40.0%
GGATCTCCAGAAATTAAAGC+CGG - chr2.4:4227508-4227527 None:intergenic 40.0%
GTACAGATTAACACCTGCAA+TGG + chr2.4:4226850-4226869 MS.gene85206:intron 40.0%
GTCCTTATGTTTGTGCTGAA+TGG + chr2.4:4226114-4226133 MS.gene85206:CDS 40.0%
GTTACTGTAGAATGAGCTTC+AGG + chr2.4:4225717-4225736 MS.gene85206:intron 40.0%
GTTCTTACAGTGTTATCTGC+AGG + chr2.4:4228393-4228412 MS.gene85206:CDS 40.0%
GTTGTGATTGATCCCAATGA+AGG + chr2.4:4228345-4228364 MS.gene85206:CDS 40.0%
GTTGTGTTTGAAGAATTGGG+CGG + chr2.4:4229624-4229643 MS.gene85206:CDS 40.0%
GTTTAACTGCTCTAGTAGAC+CGG - chr2.4:4228186-4228205 None:intergenic 40.0%
GTTTGGTTGAAGTACATTCC+TGG + chr2.4:4226250-4226269 MS.gene85206:CDS 40.0%
TTTATAACACTGCAAGGGTG+AGG + chr2.4:4227800-4227819 MS.gene85206:intron 40.0%
! AAATGTGCTTTTGGTCTCAC+AGG - chr2.4:4229768-4229787 None:intergenic 40.0%
! AGGATTTCTGAGAAGTGGAA+AGG + chr2.4:4228365-4228384 MS.gene85206:CDS 40.0%
! CAGGTATGAGCTTCACATTT+TGG - chr2.4:4228745-4228764 None:intergenic 40.0%
! CTTCCCATGTCTAAAGCAAA+CGG - chr2.4:4229317-4229336 None:intergenic 40.0%
! GCTACTGTTGCATAAGCTTT+TGG - chr2.4:4227712-4227731 None:intergenic 40.0%
! GCTTATGCAACAGTAGCTTT+TGG + chr2.4:4227715-4227734 MS.gene85206:CDS 40.0%
! GCTTTAGACATGGGAAGTAT+GGG + chr2.4:4229320-4229339 MS.gene85206:CDS 40.0%
! GGATCTCCTCCAAAATTTTC+AGG - chr2.4:4230248-4230267 None:intergenic 40.0%
! GTGTCACCTGAAAATTTTGG+AGG + chr2.4:4230239-4230258 MS.gene85206:CDS 40.0%
! TCGATCAAATTCGCTAGCTT+TGG + chr2.4:4229816-4229835 MS.gene85206:CDS 40.0%
! TCGTTACTCTCCTTTTGATC+AGG + chr2.4:4228677-4228696 MS.gene85206:intron 40.0%
! TCTCTTCTAAGTGTTGCAGT+TGG + chr2.4:4228779-4228798 MS.gene85206:CDS 40.0%
! TCTGAACCGGCTTTAATTTC+TGG + chr2.4:4227499-4227518 MS.gene85206:CDS 40.0%
! TGCTTTAGACATGGGAAGTA+TGG + chr2.4:4229319-4229338 MS.gene85206:CDS 40.0%
! TGTGGAGTACCACAAGTAAT+CGG - chr2.4:4228225-4228244 None:intergenic 40.0%
! TTGGCAGAAATGGTCTTACA+AGG + chr2.4:4229064-4229083 MS.gene85206:CDS 40.0%
!! AATTTTGGTAGAACTGCTGG+TGG + chr2.4:4227271-4227290 MS.gene85206:CDS 40.0%
!! GCTGAATGGAATTTTGGGTA+GGG + chr2.4:4226128-4226147 MS.gene85206:intron 40.0%
!! TGCTGAATGGAATTTTGGGT+AGG + chr2.4:4226127-4226146 MS.gene85206:intron 40.0%
!!! GGTGGGACTTGTTTTAGTTA+CGG + chr2.4:4227558-4227577 MS.gene85206:intron 40.0%
!!! GTGGGACTTGTTTTAGTTAC+GGG + chr2.4:4227559-4227578 MS.gene85206:intron 40.0%
!!! TTGGCCCTCATTTTGAAACA+TGG + chr2.4:4228979-4228998 MS.gene85206:CDS 40.0%
AAGACCATTTCTGCCAAGAC+AGG - chr2.4:4229061-4229080 None:intergenic 45.0%
AATGGACATGAACCTTCACC+TGG + chr2.4:4225887-4225906 MS.gene85206:CDS 45.0%
ACATGGAATGCTGGTGTTCT+TGG + chr2.4:4228996-4229015 MS.gene85206:CDS 45.0%
ACCAAAATGGGGTCATCTGA+AGG + chr2.4:4227453-4227472 MS.gene85206:CDS 45.0%
ACCGAGAGAATGAAGACTCA+AGG - chr2.4:4229195-4229214 None:intergenic 45.0%
ACGGATCGGAAACTATCAAG+AGG + chr2.4:4227537-4227556 MS.gene85206:CDS 45.0%
AGGCTATTTGAATCTCAGGG+TGG + chr2.4:4226474-4226493 MS.gene85206:CDS 45.0%
ATCTGCTGCCCATTTAGTGT+AGG - chr2.4:4226667-4226686 None:intergenic 45.0%
ATGGTCTCGATGAAGGTAGA+AGG + chr2.4:4229033-4229052 MS.gene85206:CDS 45.0%
ATGTAGAAGTAACTGTGGCG+AGG + chr2.4:4229454-4229473 MS.gene85206:CDS 45.0%
CAAAGATGTGGACAGAAGCT+TGG + chr2.4:4226914-4226933 MS.gene85206:CDS 45.0%
CAAGATAGTCCACCGTGAAT+AGG - chr2.4:4228110-4228129 None:intergenic 45.0%
CAAGCTTCTGTCCACATCTT+TGG - chr2.4:4226916-4226935 None:intergenic 45.0%
CAATTATGATCGGCTGACAG+TGG - chr2.4:4230012-4230031 None:intergenic 45.0%
CACTAAATGGGCAGCAGATA+TGG + chr2.4:4226668-4226687 MS.gene85206:CDS 45.0%
CATTCATGGCTGATACCAAC+TGG + chr2.4:4229591-4229610 MS.gene85206:CDS 45.0%
CGGCTTAGTATTGTAACGCA+GGG - chr2.4:4228869-4228888 None:intergenic 45.0%
CTGGAGATCCTACCATTACA+CGG + chr2.4:4227518-4227537 MS.gene85206:CDS 45.0%
GAAAGCTAAGGAAGGAGGTT+TGG + chr2.4:4225838-4225857 MS.gene85206:CDS 45.0%
GAACACGAGTCATCTTCATC+TGG - chr2.4:4228088-4228107 None:intergenic 45.0%
GATCCTACCATTACACGGAT+CGG + chr2.4:4227523-4227542 MS.gene85206:CDS 45.0%
GATCGGAAACTATCAAGAGG+TGG + chr2.4:4227540-4227559 MS.gene85206:intron 45.0%
GATTGCTACGGCAACCAAAA+TGG + chr2.4:4227440-4227459 MS.gene85206:CDS 45.0%
GCCTTGAGTCTTCATTCTCT+CGG + chr2.4:4229191-4229210 MS.gene85206:CDS 45.0%
GCTGAACTTACAACAGGATC+AGG - chr2.4:4226747-4226766 None:intergenic 45.0%
GGCAAGTTAGCGATAAGACA+TGG - chr2.4:4228309-4228328 None:intergenic 45.0%
GGCTTAGTATTGTAACGCAG+GGG - chr2.4:4228868-4228887 None:intergenic 45.0%
GGTACCATGTTCCTCATTCA+TGG + chr2.4:4229577-4229596 MS.gene85206:intron 45.0%
GTATGGGAAAAGGACAAGTG+TGG + chr2.4:4229336-4229355 MS.gene85206:CDS 45.0%
GTGGAAGGTTCCATCATCAT+TGG + chr2.4:4225535-4225554 MS.gene85206:CDS 45.0%
GTTGGTATCAGCCATGAATG+AGG - chr2.4:4229591-4229610 None:intergenic 45.0%
GTTTGCAGGTTTACGGAGTT+TGG + chr2.4:4227051-4227070 MS.gene85206:intron 45.0%
TAAACGGTGTTCTTGCAGTC+AGG - chr2.4:4227784-4227803 None:intergenic 45.0%
TAAGAAAGGTCAAGCAAGCG+TGG - chr2.4:4228591-4228610 None:intergenic 45.0%
TCAGCCATGAATGAGGAACA+TGG - chr2.4:4229584-4229603 None:intergenic 45.0%
TCCTGTGTACAGGATTGCTA+CGG + chr2.4:4227428-4227447 MS.gene85206:intron 45.0%
TCGGCTTAGTATTGTAACGC+AGG - chr2.4:4228870-4228889 None:intergenic 45.0%
TCTTGCTTGCACATGATCCA+CGG - chr2.4:4226717-4226736 None:intergenic 45.0%
TGCATTACAACTTGCCTCCT+TGG + chr2.4:4227743-4227762 MS.gene85206:CDS 45.0%
TGCGTAGTCACAGTTATCAC+AGG - chr2.4:4229414-4229433 None:intergenic 45.0%
TGGTCTCGATGAAGGTAGAA+GGG + chr2.4:4229034-4229053 MS.gene85206:CDS 45.0%
TGTGATAACTGTGACTACGC+AGG + chr2.4:4229413-4229432 MS.gene85206:CDS 45.0%
TGTTGGACAGAACTCATGCA+AGG + chr2.4:4230211-4230230 MS.gene85206:CDS 45.0%
TTCGTCAATAGTCAGCTGTC+AGG + chr2.4:4228432-4228451 MS.gene85206:CDS 45.0%
TTGAGTCTTCATTCTCTCGG+TGG + chr2.4:4229194-4229213 MS.gene85206:CDS 45.0%
TTGCTACGGCAACCAAAATG+GGG + chr2.4:4227442-4227461 MS.gene85206:CDS 45.0%
TTTCCGATCCGTGTAATGGT+AGG - chr2.4:4227529-4227548 None:intergenic 45.0%
! ATAGAGAGAAGAAAGCGCGA+TGG - chr2.4:4229105-4229124 None:intergenic 45.0%
! GACATGGGAAGTATGGGAAA+AGG + chr2.4:4229326-4229345 MS.gene85206:CDS 45.0%
! GAGTATGAAATTGGTGCTCC+AGG + chr2.4:4226636-4226655 MS.gene85206:CDS 45.0%
! GCACCGTTTGCTTTAGACAT+GGG + chr2.4:4229311-4229330 MS.gene85206:CDS 45.0%
! TAGAGAGAAGAAAGCGCGAT+GGG - chr2.4:4229104-4229123 None:intergenic 45.0%
! TCCTTCAGATGACCCCATTT+TGG - chr2.4:4227457-4227476 None:intergenic 45.0%
! TGCACCGTTTGCTTTAGACA+TGG + chr2.4:4229310-4229329 MS.gene85206:CDS 45.0%
!! AATACCTCAGGAGTGCTTCT+TGG - chr2.4:4225677-4225696 None:intergenic 45.0%
!! ATAAAGTTGGTGCAGCAAGC+TGG + chr2.4:4226068-4226087 MS.gene85206:CDS 45.0%
!! CTATTCACGGTGGACTATCT+TGG + chr2.4:4228108-4228127 MS.gene85206:CDS 45.0%
!! GACAGAATTTTGGCCGTTAC+TGG + chr2.4:4229366-4229385 MS.gene85206:CDS 45.0%
!! TCAGGTGAGGAGCATTATAC+TGG + chr2.4:4228450-4228469 MS.gene85206:intron 45.0%
!! TTATCCAAGAAGCACTCCTG+AGG + chr2.4:4225670-4225689 MS.gene85206:CDS 45.0%
AAACGGTGCAATTCCGTCTG+GGG - chr2.4:4229300-4229319 None:intergenic 50.0%
AAGGTAGAAGGGACCTGTCT+TGG + chr2.4:4229045-4229064 MS.gene85206:CDS 50.0%
ACTACCTTTGATGCCCCAGA+CGG + chr2.4:4229284-4229303 MS.gene85206:intron 50.0%
ACTCGTGTTCCTATTCACGG+TGG + chr2.4:4228098-4228117 MS.gene85206:CDS 50.0%
AGAGAGAGAGAGAACGAACC+GGG - chr2.4:4228808-4228827 None:intergenic 50.0%
ATGTGGACAGAAGCTTGGAC+TGG + chr2.4:4226919-4226938 MS.gene85206:CDS 50.0%
CAAACGGTGCAATTCCGTCT+GGG - chr2.4:4229301-4229320 None:intergenic 50.0%
CAATAGTCAGCTGTCAGGTG+AGG + chr2.4:4228437-4228456 MS.gene85206:intron 50.0%
CTTGAAGAAAGTCTCGGTCG+AGG + chr2.4:4230280-4230299 MS.gene85206:CDS 50.0%
GAAAATGCCATGTCTTCGGC+AGG - chr2.4:4227096-4227115 None:intergenic 50.0%
GAAGACTCAAGGCTTCACCA+TGG - chr2.4:4229184-4229203 None:intergenic 50.0%
GAGAGAGAGAGAGAACGAAC+CGG - chr2.4:4228809-4228828 None:intergenic 50.0%
GCACATTTATCTTGTGGCCC+TGG + chr2.4:4229780-4229799 MS.gene85206:CDS 50.0%
GCAGATATGGCTGTAGGACT+TGG + chr2.4:4226681-4226700 MS.gene85206:CDS 50.0%
GGAGCTTGTGCTGCATTTCT+TGG + chr2.4:4227676-4227695 MS.gene85206:CDS 50.0%
GGTACTCCAGTAGGATCTTG+TGG + chr2.4:4229837-4229856 MS.gene85206:CDS 50.0%
GTCACAGTTATCACAGGTCC+CGG - chr2.4:4229408-4229427 None:intergenic 50.0%
GTTTACGGAGTTTGGAGGTC+CGG + chr2.4:4227059-4227078 MS.gene85206:CDS 50.0%
TGCAGGTTTACGGAGTTTGG+AGG + chr2.4:4227054-4227073 MS.gene85206:intron 50.0%
TTCTCTCGGTGGAAGTTCCT+CGG + chr2.4:4229205-4229224 MS.gene85206:CDS 50.0%
! AAGTGTTGCAGTTGGACTCC+CGG + chr2.4:4228787-4228806 MS.gene85206:CDS 50.0%
! AATTCCGTCTGGGGCATCAA+AGG - chr2.4:4229291-4229310 None:intergenic 50.0%
! ATGGCTGTAGGACTTGGTAC+CGG + chr2.4:4226687-4226706 MS.gene85206:CDS 50.0%
! CTCGTATGCAGCCATTGACT+TGG + chr2.4:4229255-4229274 MS.gene85206:intron 50.0%
! TGGCCTGCTTATAAAGCGTC+CGG + chr2.4:4229386-4229405 MS.gene85206:CDS 50.0%
!! GCTAGCTTTGGTACTCCAGT+AGG + chr2.4:4229828-4229847 MS.gene85206:CDS 50.0%
ATGCCATGTCTTCGGCAGGT+CGG - chr2.4:4227092-4227111 None:intergenic 55.0%
CAAAGTGGACGTCACACCGA+AGG + chr2.4:4227915-4227934 MS.gene85206:intron 55.0%
CTGCTCTAGTAGACCGGTCA+TGG - chr2.4:4228180-4228199 None:intergenic 55.0%
GAATTGGGCGGTGACCCTAA+TGG + chr2.4:4229636-4229655 MS.gene85206:CDS 55.0%
GCAAACGGTGCAATTCCGTC+TGG - chr2.4:4229302-4229321 None:intergenic 55.0%
GCACATGATCCACGGAACTC+CGG - chr2.4:4226709-4226728 None:intergenic 55.0%
GCCGTAGCAATCCTGTACAC+AGG - chr2.4:4227432-4227451 None:intergenic 55.0%
GGGACCTGTCTTGGCAGAAA+TGG + chr2.4:4229054-4229073 MS.gene85206:CDS 55.0%
GTCCCGGACGCTTTATAAGC+AGG - chr2.4:4229392-4229411 None:intergenic 55.0%
GTGGCGAGGCTTCTCAAAGA+TGG + chr2.4:4229468-4229487 MS.gene85206:CDS 55.0%
TGGAAGTTCCTCGGTCGAGT+GGG + chr2.4:4229214-4229233 MS.gene85206:CDS 55.0%
TGGGCAGCAGATATGGCTGT+AGG + chr2.4:4226675-4226694 MS.gene85206:CDS 55.0%
! AGAAAGCGCGATGGGTGTTC+AGG - chr2.4:4229096-4229115 None:intergenic 55.0%
! GAAAGCGCGATGGGTGTTCA+GGG - chr2.4:4229095-4229114 None:intergenic 55.0%
! GGCCTGCTTATAAAGCGTCC+GGG + chr2.4:4229387-4229406 MS.gene85206:CDS 55.0%
ATGTCTTCGGCAGGTCGGTG+AGG - chr2.4:4227087-4227106 None:intergenic 60.0%
GTGGAAGTTCCTCGGTCGAG+TGG + chr2.4:4229213-4229232 MS.gene85206:CDS 60.0%
TCACCGACCTGCCGAAGACA+TGG + chr2.4:4227086-4227105 MS.gene85206:CDS 60.0%
! GACTTGGTACCGGAGTTCCG+TGG + chr2.4:4226697-4226716 MS.gene85206:CDS 60.0%
! TCCTCGGTCGAGTGGGTTCA+GGG + chr2.4:4229221-4229240 MS.gene85206:CDS 60.0%
! TTCCTCGGTCGAGTGGGTTC+AGG + chr2.4:4229220-4229239 MS.gene85206:CDS 60.0%
!! GGACAGAAGCTTGGACTGGC+TGG + chr2.4:4226923-4226942 MS.gene85206:CDS 60.0%
TCGGCAGGTCGGTGAGGTAC+CGG - chr2.4:4227081-4227100 None:intergenic 65.0%
! CCTCGGTCGAGTGGGTTCAG+GGG + chr2.4:4229222-4229241 MS.gene85206:CDS 65.0%
CCCCTGAACCCACTCGACCG+AGG - chr2.4:4229225-4229244 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 4225533 4230316 4225533 ID=MS.gene85206
chr2.4 mRNA 4225533 4230316 4225533 ID=MS.gene85206.t1;Parent=MS.gene85206
chr2.4 exon 4225533 4225691 4225533 ID=MS.gene85206.t1.exon1;Parent=MS.gene85206.t1
chr2.4 CDS 4225533 4225691 4225533 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4225818 4225913 4225818 ID=MS.gene85206.t1.exon2;Parent=MS.gene85206.t1
chr2.4 CDS 4225818 4225913 4225818 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4226032 4226144 4226032 ID=MS.gene85206.t1.exon3;Parent=MS.gene85206.t1
chr2.4 CDS 4226032 4226144 4226032 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4226240 4226306 4226240 ID=MS.gene85206.t1.exon4;Parent=MS.gene85206.t1
chr2.4 CDS 4226240 4226306 4226240 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4226423 4226515 4226423 ID=MS.gene85206.t1.exon5;Parent=MS.gene85206.t1
chr2.4 CDS 4226423 4226515 4226423 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4226612 4226755 4226612 ID=MS.gene85206.t1.exon6;Parent=MS.gene85206.t1
chr2.4 CDS 4226612 4226755 4226612 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4226856 4226944 4226856 ID=MS.gene85206.t1.exon7;Parent=MS.gene85206.t1
chr2.4 CDS 4226856 4226944 4226856 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4227059 4227164 4227059 ID=MS.gene85206.t1.exon8;Parent=MS.gene85206.t1
chr2.4 CDS 4227059 4227164 4227059 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4227256 4227343 4227256 ID=MS.gene85206.t1.exon9;Parent=MS.gene85206.t1
chr2.4 CDS 4227256 4227343 4227256 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4227440 4227558 4227440 ID=MS.gene85206.t1.exon10;Parent=MS.gene85206.t1
chr2.4 CDS 4227440 4227558 4227440 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4227652 4227816 4227652 ID=MS.gene85206.t1.exon11;Parent=MS.gene85206.t1
chr2.4 CDS 4227652 4227816 4227652 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4228068 4228246 4228068 ID=MS.gene85206.t1.exon12;Parent=MS.gene85206.t1
chr2.4 CDS 4228068 4228246 4228068 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4228344 4228453 4228344 ID=MS.gene85206.t1.exon13;Parent=MS.gene85206.t1
chr2.4 CDS 4228344 4228453 4228344 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4228699 4228808 4228699 ID=MS.gene85206.t1.exon14;Parent=MS.gene85206.t1
chr2.4 CDS 4228699 4228808 4228699 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4228975 4229085 4228975 ID=MS.gene85206.t1.exon15;Parent=MS.gene85206.t1
chr2.4 CDS 4228975 4229085 4228975 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4229173 4229257 4229173 ID=MS.gene85206.t1.exon16;Parent=MS.gene85206.t1
chr2.4 CDS 4229173 4229257 4229173 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4229303 4229489 4229303 ID=MS.gene85206.t1.exon17;Parent=MS.gene85206.t1
chr2.4 CDS 4229303 4229489 4229303 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4229578 4229914 4229578 ID=MS.gene85206.t1.exon18;Parent=MS.gene85206.t1
chr2.4 CDS 4229578 4229914 4229578 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
chr2.4 exon 4230206 4230316 4230206 ID=MS.gene85206.t1.exon19;Parent=MS.gene85206.t1
chr2.4 CDS 4230206 4230316 4230206 ID=cds.MS.gene85206.t1;Parent=MS.gene85206.t1
Gene Sequence

>MS.gene85206

ATGTGGAAGGTTCCATCATCATTGGTTCTTCTGCTAGCATGTTCTCTTATTGGTTCTGTTATAGCTTCTGTGTCTTATGACTCTAAAGCTATCACCATTAATGGACAAAGAAGGATCCTCATTTCTGGATCCATTCATTATCCAAGAAGCACTCCTGAGGTATTATTATATAATATTTTTACTTGTTACTGTAGAATGAGCTTCAGGGTTGTTGTATTTTATTGTTTTTCTCAAATATTTATGTGATTTGTATAACTAAGTTGGTTTTTTTGTTCATATTTTCAGATGTGGCCAGATCTTATACAGAAAGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTTTGGAATGGACATGAACCTTCACCTGGCAAAGTAATAATAATAACTAATGATAATTAAAACAATGTCTTTTAGTTTTAGTAGTAGTTCTGCTCAAACAGTGCATAGTTATGATTTATGAGTGAAAAATAATCATTTTTTTTTGGTGTAGTATTATTTTGAGGGGAACTATGATTTGGTGAAGTTCATAAAGTTGGTGCAGCAAGCTGGTCTTTATGTTCATCTAAGGATTGGTCCTTATGTTTGTGCTGAATGGAATTTTGGGTAGGGAAATTGTTCCTTTCCTATCTTTTTGGCAAAAATATTTGACACTTGTCAAACTAGAAATGTGTTAATAGATTTGCTTAATTGATTTTTAGGGGTTTTCCTGTTTGGTTGAAGTACATTCCTGGTATCAGTTTTAGAACTGACAATGATCCATTTAAGGTAATATTTTCAGTTATTATTATACCTTAAGCACTGTTAAAGATTCTCATTATTTCCCTTTTCATTGATTAGTACCTTCTAATTAGTTTTTGTTTTTATATATTGCCATAATGAAGTTTCAAATGCAAAAATTTACTGAGAAGATTGTTGATATGATGAAAGCAGACAGGCTATTTGAATCTCAGGGTGGTCCAATAATTATGTCTCAGGTAGACTAAACATGCTGCTAGCTTTCTACTTAATCTAATTTTGCTTTAAATTATCTTATGTTTTATTTATTGACTAGAACTTGTGATTTTATGTAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCAGGTAAATCCTACACTAAATGGGCAGCAGATATGGCTGTAGGACTTGGTACCGGAGTTCCGTGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTGTTGTAAGTTCAGCTGAATTGTATCATTTTTTAAGAAAATATTTTTATTCATGAATGCCTTCAATGATTTTAGCCTCTAATTTCGACGTAAAACGTTGTACAGATTAACACCTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGATTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTATTGATGCCTTGCTTCTTATTTCTTAGGTTTCCATAAGAATGAGATAAATGCAAGCTAGATATAATATAAGATTGACTATACATTGCTTTTGTTCCTCTTTTATGTTTGCAGGTTTACGGAGTTTGGAGGTCCGGTACCTCACCGACCTGCCGAAGACATGGCATTTTCAGTTGCAAGATTTATACAGAAAGGAGGATCATTTATCAATTATTACATGGTAACTTCATTGTTTATTGAATTTAATGTGCTGTTGTGTAGGGTAACCATTTTTTAGTATTGAACTTGGCCCATTATTTTGTTCATTTCAGTATCATGGAGGAACAAATTTTGGTAGAACTGCTGGTGGTCCTTTCATTGCTACAAGCTATGACTATGATGCACCTCTTGATGAATATGGTAAACACAAAGGATTCTAATACTTGTTATAACCAATAAGAACTATACATATTTTATACACTTAAGTAGGGTTTTAATTTTGTTTCCTGTGTACAGGATTGCTACGGCAACCAAAATGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTCTGAACCGGCTTTAATTTCTGGAGATCCTACCATTACACGGATCGGAAACTATCAAGAGGTGGGACTTGTTTTAGTTACGGGAAAATTATCAAACCTATCTAAAATGCTTTGTAACAAGACTGAATTTCTATCTTTAATCATTACTGTGCAGGCTCATGTGTTTAAATCGAAGTCGGGAGCTTGTGCTGCATTTCTTGGAAACTATAATCCAAAAGCTTATGCAACAGTAGCTTTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACCGTTTATAACACTGCAAGGGTGAGGAAAAAAACATTTTCATTTCTGTAGAGCTTGACCAAAGATATGTGATTGAGTAGATTCAATAACATTTTATATTCAGTTATAGTCTTATTTAGCAAAGTGGACGTCACACCGAAGGAAAATAATGAAATTTTTCTAGTGTCTTATTTTTATTTACATGATCTTGTTGGACTGAATTTCCATCTGCAATGAACAGAAAGATATTCCTCTCGGAGATCCAAAATTAAAATTCCAAAATCTCTTTACAGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGTGTTCCTATTCACGGTGGACTATCTTGGCAAGTGTTCACTGAACAAACAGCCTCTACTGATGATAGTTCATTCACCATGACCGGTCTACTAGAGCAGTTAAACACAACAAGAGATTTAACCGATTACTTGTGGTACTCCACAGAGTGAGTAATAAACAACACTGCAGTTATGAAATGATGACTCATCATTCATTTTGGCTTCTCCATGTCTTATCGCTAACTTGCCCCCTTCTTTTGCTAGTGTTGTGATTGATCCCAATGAAGGATTTCTGAGAAGTGGAAAGGATCCTGTTCTTACAGTGTTATCTGCAGGGCATGCTTTGCATGTTTTCGTCAATAGTCAGCTGTCAGGTGAGGAGCATTATACTGGTTTATGAAATTTCATGTTAGATTAAAATTTGATGTATGCTCTTGAGGATATGATACATAGTAACAATACTTGGAATGAATATATCTAGGCTTCATTAAGTTATCAAAATTAGTCGCCACGCTTGCTTGACCTTTCTTATTCAAATAAAAAAAAATAGTCCGAATAAACTATTTTACTTCAAAAGCTAATAATTATCCGCTAACATCGTTACTCTCCTTTTGATCAGGAACTATATATGGAAGCTTAGAATTCCCCAAGCTAACTTTTAGCCAAAATGTGAAGCTCATACCTGGTGTCAACAAAATATCTCTTCTAAGTGTTGCAGTTGGACTCCCGGTTCGTTCTCTCTCTCTCTCTCACACACAGACATTGAAAATATATAGTTTTAAGAACCCCTGCGTTACAATACTAAGCCGATTTATCTGAATCATGAACTGTATTGTAGTATGATCTTTCTTGACAATTCTATATTACTTACTTGCTGCTTGTTACTGTAACACAGAATGTTGGCCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCGATTACATTAAATGGTCTCGATGAAGGTAGAAGGGACCTGTCTTGGCAGAAATGGTCTTACAAGGTTCTGCCCTGAACACCCATCGCGCTTTCTTCTCTCTATATTTCCTGATTTTGCTCAAAAATTCATTAAAATTACTGTTTTATTTAGGTTGGTCTCCATGGTGAAGCCTTGAGTCTTCATTCTCTCGGTGGAAGTTCCTCGGTCGAGTGGGTTCAGGGGAGTTTAGTTTCTCGTATGCAGCCATTGACTTGGTACAAAACTACCTTTGATGCCCCAGACGGAATTGCACCGTTTGCTTTAGACATGGGAAGTATGGGAAAAGGACAAGTGTGGTTAAATGGACAGAATTTTGGCCGTTACTGGCCTGCTTATAAAGCGTCCGGGACCTGTGATAACTGTGACTACGCAGGAACTTATAATGAGAATAAATGTAGAAGTAACTGTGGCGAGGCTTCTCAAAGATGGTGAGTGAGAAACATAAAGTTTTCCTCATAGTTTTGCCTAATGCCGATGATAAATATTGATAAACTAATCACTAAATGGTAATTTCAGGTACCATGTTCCTCATTCATGGCTGATACCAACTGGAAATTTATTGGTTGTGTTTGAAGAATTGGGCGGTGACCCTAATGGAATCTTTTTAGTTAGAAGGGATATAGATAGTGTATGTGCAGATATTTATGAGTGGCAGCCAAATCTTATAAGTTATCAGATGCAAACTTCTGGCAAAACTAACAAACCTGTGAGACCAAAAGCACATTTATCTTGTGGCCCTGGACAGAAAATATCATCGATCAAATTCGCTAGCTTTGGTACTCCAGTAGGATCTTGTGGAAACTTTCATGAAGGAAGCTGTCATGCTCACAAGTCTTACAATACCTTTGAAAAGGTATTGCTATAGCTAGACATAGTTTCTGATAAAACATGATATCTTTTTAAGTTAAGATTCAATGCATATACATTGTCAGTATAAAAACTTTTTTCCACTGTCAGCCGATCATAATTGTCAGATCATTAAAAATGTTGCATCAACAGTGTATCAATATTTAACTCTTTGCAGTACTAAAGGCTCTAAAATAAAATCTTTTAGGTTCAAGTCGAAAAGTCAAATTTTCAACCATTTGTATTTGATTGTCACTTATACTTGTTTCATTAACCAAAAGTGATTTTGTTGTTTCAGAATTGTGTTGGACAGAACTCATGCAAGGTAACTGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAAGTCTCGGTCGAGGCCATTTGTACCTGA
Protein sequence

>MS.gene85206.t1

MWKVPSSLVLLLACSLIGSVIASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNDPFKFQMQKFTEKIVDMMKADRLFESQGGPIIMSQIENEYGPMEYEIGAPGKSYTKWAADMAVGLGTGVPWIMCKQDDAPDPVINTCNGFYCDYFSPNKDYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLSEPALISGDPTITRIGNYQEAHVFKSKSGACAAFLGNYNPKAYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWQVFTEQTASTDDSSFTMTGLLEQLNTTRDLTDYLWYSTDVVIDPNEGFLRSGKDPVLTVLSAGHALHVFVNSQLSGTIYGSLEFPKLTFSQNVKLIPGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLDEGRRDLSWQKWSYKVGLHGEALSLHSLGGSSSVEWVQGSLVSHGIAPFALDMGSMGKGQVWLNGQNFGRYWPAYKASGTCDNCDYAGTYNENKCRSNCGEASQRWYHVPHSWLIPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQTSGKTNKPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNFHEGSCHAHKSYNTFEKNCVGQNSCKVTVSPENFGGDPCPNVLKKVSVEAICT