Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051979.t1 | ACL36992.1 | 98.9 | 282 | 3 | 0 | 1 | 282 | 1 | 282 | 4.90E-158 | 567 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051979.t1 | P27054 | 73.2 | 280 | 64 | 4 | 4 | 282 | 1 | 270 | 3.6e-109 | 396.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051979.t1 | B8Y647 | 98.9 | 282 | 3 | 0 | 1 | 282 | 1 | 282 | 3.5e-158 | 567.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051979 | MS.gene056982 | 0.995666 | 1.33E-218 | -1.69E-46 |
MS.gene051979 | MS.gene62676 | 0.805835 | 1.10E-49 | -1.69E-46 |
MS.gene051979 | MS.gene73236 | 0.803794 | 2.94E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051979.t1 | MTR_2g099470 | 97.518 | 282 | 7 | 0 | 1 | 282 | 1 | 282 | 0.0 | 576 |
MS.gene051979.t1 | MTR_2g099465 | 70.671 | 283 | 51 | 4 | 3 | 282 | 1 | 254 | 2.09e-142 | 400 |
MS.gene051979.t1 | MTR_8g074350 | 36.957 | 322 | 151 | 9 | 4 | 282 | 1 | 313 | 5.59e-58 | 188 |
MS.gene051979.t1 | MTR_3g118390 | 36.076 | 316 | 148 | 9 | 9 | 282 | 57 | 360 | 6.39e-58 | 190 |
MS.gene051979.t1 | MTR_8g074330 | 37.584 | 298 | 137 | 9 | 30 | 282 | 20 | 313 | 6.08e-54 | 178 |
MS.gene051979.t1 | MTR_7g110780 | 39.241 | 237 | 108 | 6 | 81 | 282 | 36 | 271 | 3.41e-53 | 174 |
MS.gene051979.t1 | MTR_8g074335 | 37.282 | 287 | 140 | 9 | 31 | 282 | 21 | 302 | 4.56e-47 | 160 |
MS.gene051979.t1 | MTR_2g099450 | 80.000 | 80 | 16 | 0 | 1 | 80 | 1 | 80 | 1.42e-41 | 141 |
MS.gene051979.t1 | MTR_2g099450 | 59.167 | 120 | 20 | 2 | 162 | 281 | 84 | 174 | 2.03e-37 | 130 |
MS.gene051979.t1 | MTR_2g034680 | 31.120 | 241 | 121 | 8 | 86 | 282 | 62 | 301 | 2.59e-24 | 100 |
MS.gene051979.t1 | MTR_1g105535 | 27.273 | 253 | 131 | 7 | 78 | 282 | 60 | 307 | 1.89e-20 | 89.7 |
MS.gene051979.t1 | MTR_7g021640 | 25.714 | 315 | 171 | 12 | 14 | 282 | 7 | 304 | 5.23e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051979.t1 | AT3G54420 | 66.667 | 282 | 84 | 3 | 1 | 282 | 2 | 273 | 5.05e-137 | 388 |
MS.gene051979.t1 | AT2G43590 | 56.863 | 255 | 100 | 3 | 28 | 282 | 20 | 264 | 5.78e-106 | 309 |
MS.gene051979.t1 | AT2G43580 | 52.941 | 255 | 111 | 3 | 28 | 282 | 20 | 265 | 1.31e-96 | 285 |
MS.gene051979.t1 | AT2G43570 | 50.000 | 284 | 121 | 8 | 6 | 282 | 8 | 277 | 8.21e-89 | 266 |
MS.gene051979.t1 | AT2G43620 | 45.683 | 278 | 130 | 8 | 18 | 282 | 14 | 283 | 8.47e-83 | 250 |
MS.gene051979.t1 | AT2G43610 | 44.718 | 284 | 138 | 7 | 10 | 282 | 6 | 281 | 2.28e-82 | 249 |
MS.gene051979.t1 | AT3G47540 | 45.982 | 224 | 98 | 5 | 60 | 282 | 13 | 214 | 9.29e-62 | 194 |
MS.gene051979.t1 | AT1G56680 | 39.068 | 279 | 150 | 11 | 15 | 282 | 11 | 280 | 2.01e-59 | 191 |
MS.gene051979.t1 | AT1G56680 | 39.068 | 279 | 150 | 11 | 15 | 282 | 34 | 303 | 4.87e-59 | 190 |
MS.gene051979.t1 | AT3G47540 | 44.796 | 221 | 99 | 5 | 60 | 279 | 13 | 211 | 3.04e-57 | 185 |
MS.gene051979.t1 | AT3G12500 | 39.286 | 280 | 132 | 6 | 37 | 282 | 45 | 320 | 1.66e-55 | 182 |
MS.gene051979.t1 | AT2G43600 | 35.563 | 284 | 160 | 11 | 11 | 282 | 1 | 273 | 8.07e-54 | 176 |
MS.gene051979.t1 | AT2G43600 | 35.439 | 285 | 161 | 11 | 10 | 282 | 21 | 294 | 1.69e-53 | 176 |
MS.gene051979.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 29 | 265 | 1.52e-52 | 173 |
MS.gene051979.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 75 | 311 | 3.13e-52 | 173 |
MS.gene051979.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 81 | 317 | 3.43e-52 | 173 |
MS.gene051979.t1 | AT4G01700 | 38.912 | 239 | 110 | 5 | 79 | 282 | 36 | 273 | 8.13e-50 | 166 |
MS.gene051979.t1 | AT1G05850 | 22.500 | 320 | 175 | 10 | 11 | 282 | 10 | 304 | 1.67e-20 | 89.7 |
MS.gene051979.t1 | AT1G05850 | 22.500 | 320 | 175 | 10 | 11 | 282 | 10 | 304 | 1.67e-20 | 89.7 |
MS.gene051979.t1 | AT3G16920 | 27.530 | 247 | 133 | 9 | 81 | 282 | 68 | 313 | 2.03e-19 | 87.0 |
MS.gene051979.t1 | AT3G16920 | 27.530 | 247 | 133 | 9 | 81 | 282 | 92 | 337 | 2.22e-19 | 87.0 |
Find 76 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATCATTGGCCACTGTTTC+AGG | 0.200039 | 2.2:-3503468 | None:intergenic |
GTTTGGTAGGTCTGGTTCTT+TGG | 0.220014 | 2.2:+3503012 | MS.gene051979:CDS |
CGACCGTAGTAACCTTTGTT+AGG | 0.286313 | 2.2:-3503369 | None:intergenic |
CTATCTTGGAACTACAACTA+TGG | 0.300245 | 2.2:+3503405 | MS.gene051979:CDS |
TCATCACAGTAGTCCTTTGA+TGG | 0.329355 | 2.2:-3503321 | None:intergenic |
GCCCATTTCACACATGAAAC+TGG | 0.337434 | 2.2:+3503067 | MS.gene051979:CDS |
AAGGCTTTGGTGCAACCATT+AGG | 0.341342 | 2.2:+3503553 | MS.gene051979:CDS |
CTCAATTCTTATAATCAGTT+TGG | 0.343244 | 2.2:+3502995 | MS.gene051979:CDS |
TATAATCAGTTTGGTAGGTC+TGG | 0.352546 | 2.2:+3503004 | MS.gene051979:CDS |
TCAAGACAGCATTATGGTAT+TGG | 0.355700 | 2.2:+3503502 | MS.gene051979:CDS |
GTCCAGTTTCATGTGTGAAA+TGG | 0.356084 | 2.2:-3503069 | None:intergenic |
GCAACCATTAGGGCTATTAA+TGG | 0.385855 | 2.2:+3503564 | MS.gene051979:CDS |
TGTCCTTCAAGACAGCATTA+TGG | 0.387076 | 2.2:+3503496 | MS.gene051979:CDS |
TGCTATACCGAAGAGATTGA+TGG | 0.389108 | 2.2:+3503297 | MS.gene051979:CDS |
AGCAGCTGCAACCTCACGTT+TGG | 0.392131 | 2.2:-3503041 | None:intergenic |
ATACCATAATGCTGTCTTGA+AGG | 0.394568 | 2.2:-3503499 | None:intergenic |
AGGCTTTGGTGCAACCATTA+GGG | 0.395270 | 2.2:+3503554 | MS.gene051979:CDS |
TAGGCAAACTTGGTGGTGTT+TGG | 0.406151 | 2.2:-3502853 | None:intergenic |
GCCACATTAGCATCATTGTT+AGG | 0.421338 | 2.2:-3502872 | None:intergenic |
GACCGTAGTAACCTTTGTTA+GGG | 0.424083 | 2.2:-3503368 | None:intergenic |
CTCTCATAATATGACTATGA+TGG | 0.427890 | 2.2:+3502640 | None:intergenic |
GAAGGACACAACAGCATCAT+TGG | 0.428454 | 2.2:-3503481 | None:intergenic |
TATTGAAGAATTCTTGTGTA+AGG | 0.434772 | 2.2:-3502901 | None:intergenic |
TCGACCATTAATAGCCCTAA+TGG | 0.441150 | 2.2:-3503568 | None:intergenic |
TCCAGTTTCATGTGTGAAAT+GGG | 0.442834 | 2.2:-3503068 | None:intergenic |
GCATCATTGTTAGGCAAACT+TGG | 0.445718 | 2.2:-3502863 | None:intergenic |
GGTGTCATCAACCAAGGCTT+TGG | 0.445762 | 2.2:+3503540 | MS.gene051979:CDS |
GCTAGCTAGCTTAGCAAGTA+AGG | 0.447017 | 2.2:-3503686 | None:intergenic |
GTGGACCGATTCAACTATCT+TGG | 0.452579 | 2.2:+3503391 | MS.gene051979:CDS |
AGTGAGTTGGGTGTTGCTCC+TGG | 0.457642 | 2.2:+3503657 | MS.gene051979:CDS |
CAAATCACTAAGCATATGTA+TGG | 0.459351 | 2.2:+3502667 | MS.gene051979:CDS |
CAAGCTGATTCTAGCTGTGC+AGG | 0.462495 | 2.2:+3502935 | MS.gene051979:CDS |
CACTCAATATTGTAGTGAGT+TGG | 0.467919 | 2.2:+3503644 | MS.gene051979:CDS |
AAACTGATTATAAGAATTGA+GGG | 0.470862 | 2.2:-3502993 | None:intergenic |
GGAGTGTGTTGCAGCCAATA+CGG | 0.476582 | 2.2:+3502767 | MS.gene051979:CDS |
CAAACTGATTATAAGAATTG+AGG | 0.480529 | 2.2:-3502994 | None:intergenic |
CATTACCACAATACCCGTAT+TGG | 0.482956 | 2.2:-3502781 | None:intergenic |
TGATGGACCATCAATCTCTT+CGG | 0.485027 | 2.2:-3503304 | None:intergenic |
ACTCAATATTGTAGTGAGTT+GGG | 0.486051 | 2.2:+3503645 | MS.gene051979:CDS |
CAATACGGGTATTGTGGTAA+TGG | 0.497456 | 2.2:+3502782 | MS.gene051979:CDS |
TAGTTCCAAGATAGTTGAAT+CGG | 0.500260 | 2.2:-3503396 | None:intergenic |
TAATGGTTGCACCAAAGCCT+TGG | 0.502879 | 2.2:-3503551 | None:intergenic |
AACTACAACTATGGACCAGC+TGG | 0.503629 | 2.2:+3503414 | MS.gene051979:CDS |
AAACAAGGTCCTTGTTATGC+AGG | 0.505585 | 2.2:+3502830 | MS.gene051979:CDS |
TCTCATAATATGACTATGAT+GGG | 0.507140 | 2.2:+3502641 | None:intergenic |
ATTCTTATAATCAGTTTGGT+AGG | 0.512286 | 2.2:+3502999 | MS.gene051979:CDS |
ACACGAGTCTGAACTGTGGT+TGG | 0.517796 | 2.2:-3503612 | None:intergenic |
GAGTGTGTTGCAGCCAATAC+GGG | 0.522073 | 2.2:+3502768 | MS.gene051979:CDS |
CACGAGTCTGAACTGTGGTT+GGG | 0.536022 | 2.2:-3503611 | None:intergenic |
AAACCATTGTCTCTTCCAGC+TGG | 0.544197 | 2.2:-3503429 | None:intergenic |
ATGTTAGTGCTCAAAATTGT+GGG | 0.550523 | 2.2:+3502735 | MS.gene051979:CDS |
AACAAAGGTTACTACGGTCG+TGG | 0.552838 | 2.2:+3503372 | MS.gene051979:CDS |
TAACCTTTGTTAGGGGCACA+TGG | 0.560210 | 2.2:-3503360 | None:intergenic |
TGCAGCCAATACGGGTATTG+TGG | 0.572631 | 2.2:+3502776 | MS.gene051979:CDS |
GGTGATGCATATTGTGGCAC+AGG | 0.573444 | 2.2:+3502803 | MS.gene051979:CDS |
CAAAATTGTGGGTGTGCTGA+AGG | 0.577261 | 2.2:+3502746 | MS.gene051979:CDS |
AATGTTAGTGCTCAAAATTG+TGG | 0.577445 | 2.2:+3502734 | MS.gene051979:CDS |
AGAGATTGATGGTCCATCAA+AGG | 0.581585 | 2.2:+3503308 | MS.gene051979:CDS |
ACCACAGTTCAGACTCGTGT+TGG | 0.593974 | 2.2:+3503615 | MS.gene051979:CDS |
TGTGGCACAGGATGCAAACA+AGG | 0.594512 | 2.2:+3502815 | MS.gene051979:CDS |
GCCTAACAATGATGCTAATG+TGG | 0.604947 | 2.2:+3502871 | MS.gene051979:CDS |
GCCCCTAACAAAGGTTACTA+CGG | 0.616806 | 2.2:+3503366 | MS.gene051979:CDS |
TGGCCATGTGCCCCTAACAA+AGG | 0.618946 | 2.2:+3503357 | MS.gene051979:CDS |
ATTGAACACTCCTGAAACAG+TGG | 0.620125 | 2.2:+3503458 | MS.gene051979:CDS |
TCATTGTTAGGCAAACTTGG+TGG | 0.622467 | 2.2:-3502860 | None:intergenic |
GGTGTTTGGCCTGCATAACA+AGG | 0.624350 | 2.2:-3502839 | None:intergenic |
GGACCAGCTGGAAGAGACAA+TGG | 0.624670 | 2.2:+3503426 | MS.gene051979:CDS |
TTTGGATGACTCCAAACGTG+AGG | 0.624768 | 2.2:+3503030 | MS.gene051979:CDS |
TAGCAAGTAAGGTTATCACC+AGG | 0.638426 | 2.2:-3503675 | None:intergenic |
GGTAATGGTGATGCATATTG+TGG | 0.652622 | 2.2:+3502797 | MS.gene051979:CDS |
AATGGTCGACTTGAATGTGA+TGG | 0.664152 | 2.2:+3503582 | MS.gene051979:CDS |
ACCGTAGTAACCTTTGTTAG+GGG | 0.669486 | 2.2:-3503367 | None:intergenic |
GTGCACGGTGTCATCAACCA+AGG | 0.695993 | 2.2:+3503534 | MS.gene051979:CDS |
TATTGGATGAATAATGTGCA+CGG | 0.742029 | 2.2:+3503519 | MS.gene051979:CDS |
GTGATGAAAACAACACAGAG+TGG | 0.752581 | 2.2:+3503337 | MS.gene051979:CDS |
ACCAACACGAGTCTGAACTG+TGG | 0.761414 | 2.2:-3503616 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAATTTGTTATCAAATT+TGG | + | chr2.2:3503177-3503196 | MS.gene051979:intron | 10.0% |
!! | AAACTGATTATAAGAATTGA+GGG | - | chr2.2:3502996-3503015 | None:intergenic | 20.0% |
!! | AACCATGATCATAATAAAAA+AGG | - | chr2.2:3502708-3502727 | None:intergenic | 20.0% |
! | ATTCTTATAATCAGTTTGGT+AGG | + | chr2.2:3502999-3503018 | MS.gene051979:CDS | 25.0% |
! | CAAACTGATTATAAGAATTG+AGG | - | chr2.2:3502997-3503016 | None:intergenic | 25.0% |
! | CTCAATTCTTATAATCAGTT+TGG | + | chr2.2:3502995-3503014 | MS.gene051979:CDS | 25.0% |
! | TATTGAAGAATTCTTGTGTA+AGG | - | chr2.2:3502904-3502923 | None:intergenic | 25.0% |
!! | TTTTGAGCACTAACATTTTT+TGG | - | chr2.2:3502731-3502750 | None:intergenic | 25.0% |
!!! | AGCCTTTTTTATTATGATCA+TGG | + | chr2.2:3502703-3502722 | MS.gene051979:CDS | 25.0% |
!!! | CGTTAATTTTGTTTAGTTGT+TGG | - | chr2.2:3503136-3503155 | None:intergenic | 25.0% |
AAATTTGGTTACACAACTGT+TGG | + | chr2.2:3503192-3503211 | MS.gene051979:intron | 30.0% | |
AATGTTAGTGCTCAAAATTG+TGG | + | chr2.2:3502734-3502753 | MS.gene051979:CDS | 30.0% | |
AATTTGGTTACACAACTGTT+GGG | + | chr2.2:3503193-3503212 | MS.gene051979:intron | 30.0% | |
ACTCAATATTGTAGTGAGTT+GGG | + | chr2.2:3503645-3503664 | MS.gene051979:CDS | 30.0% | |
ATGTTAGTGCTCAAAATTGT+GGG | + | chr2.2:3502735-3502754 | MS.gene051979:CDS | 30.0% | |
CAAATCACTAAGCATATGTA+TGG | + | chr2.2:3502667-3502686 | MS.gene051979:CDS | 30.0% | |
TAGTTCCAAGATAGTTGAAT+CGG | - | chr2.2:3503399-3503418 | None:intergenic | 30.0% | |
TATTGGATGAATAATGTGCA+CGG | + | chr2.2:3503519-3503538 | MS.gene051979:CDS | 30.0% | |
ATACCATAATGCTGTCTTGA+AGG | - | chr2.2:3503502-3503521 | None:intergenic | 35.0% | |
CACTCAATATTGTAGTGAGT+TGG | + | chr2.2:3503644-3503663 | MS.gene051979:CDS | 35.0% | |
CTATCTTGGAACTACAACTA+TGG | + | chr2.2:3503405-3503424 | MS.gene051979:CDS | 35.0% | |
TATAATCAGTTTGGTAGGTC+TGG | + | chr2.2:3503004-3503023 | MS.gene051979:CDS | 35.0% | |
TCAAGACAGCATTATGGTAT+TGG | + | chr2.2:3503502-3503521 | MS.gene051979:CDS | 35.0% | |
TCCAGTTTCATGTGTGAAAT+GGG | - | chr2.2:3503071-3503090 | None:intergenic | 35.0% | |
ACCGTAGTAACCTTTGTTAG+GGG | - | chr2.2:3503370-3503389 | None:intergenic | 40.0% | |
ATTGAACACTCCTGAAACAG+TGG | + | chr2.2:3503458-3503477 | MS.gene051979:CDS | 40.0% | |
CATTACCACAATACCCGTAT+TGG | - | chr2.2:3502784-3502803 | None:intergenic | 40.0% | |
GACCGTAGTAACCTTTGTTA+GGG | - | chr2.2:3503371-3503390 | None:intergenic | 40.0% | |
GCAACCATTAGGGCTATTAA+TGG | + | chr2.2:3503564-3503583 | MS.gene051979:CDS | 40.0% | |
GCATCATTGTTAGGCAAACT+TGG | - | chr2.2:3502866-3502885 | None:intergenic | 40.0% | |
GCCACATTAGCATCATTGTT+AGG | - | chr2.2:3502875-3502894 | None:intergenic | 40.0% | |
GCCTAACAATGATGCTAATG+TGG | + | chr2.2:3502871-3502890 | MS.gene051979:CDS | 40.0% | |
GTCCAGTTTCATGTGTGAAA+TGG | - | chr2.2:3503072-3503091 | None:intergenic | 40.0% | |
GTGATGAAAACAACACAGAG+TGG | + | chr2.2:3503337-3503356 | MS.gene051979:CDS | 40.0% | |
TAGCAAGTAAGGTTATCACC+AGG | - | chr2.2:3503678-3503697 | None:intergenic | 40.0% | |
TCATCACAGTAGTCCTTTGA+TGG | - | chr2.2:3503324-3503343 | None:intergenic | 40.0% | |
TCATTGTTAGGCAAACTTGG+TGG | - | chr2.2:3502863-3502882 | None:intergenic | 40.0% | |
TCGACCATTAATAGCCCTAA+TGG | - | chr2.2:3503571-3503590 | None:intergenic | 40.0% | |
TGCTATACCGAAGAGATTGA+TGG | + | chr2.2:3503297-3503316 | MS.gene051979:CDS | 40.0% | |
TGTCCTTCAAGACAGCATTA+TGG | + | chr2.2:3503496-3503515 | MS.gene051979:CDS | 40.0% | |
! | AAACAAGGTCCTTGTTATGC+AGG | + | chr2.2:3502830-3502849 | MS.gene051979:CDS | 40.0% |
! | AGAGATTGATGGTCCATCAA+AGG | + | chr2.2:3503308-3503327 | MS.gene051979:CDS | 40.0% |
! | CAATACGGGTATTGTGGTAA+TGG | + | chr2.2:3502782-3502801 | MS.gene051979:CDS | 40.0% |
! | GGTAATGGTGATGCATATTG+TGG | + | chr2.2:3502797-3502816 | MS.gene051979:CDS | 40.0% |
! | TGATGGACCATCAATCTCTT+CGG | - | chr2.2:3503307-3503326 | None:intergenic | 40.0% |
!! | AATGGTCGACTTGAATGTGA+TGG | + | chr2.2:3503582-3503601 | MS.gene051979:CDS | 40.0% |
!!! | GGAAGAGACAATGGTTTTGA+TGG | + | chr2.2:3503435-3503454 | MS.gene051979:CDS | 40.0% |
AAACCATTGTCTCTTCCAGC+TGG | - | chr2.2:3503432-3503451 | None:intergenic | 45.0% | |
AACAAAGGTTACTACGGTCG+TGG | + | chr2.2:3503372-3503391 | MS.gene051979:CDS | 45.0% | |
AACTACAACTATGGACCAGC+TGG | + | chr2.2:3503414-3503433 | MS.gene051979:CDS | 45.0% | |
CAAAATTGTGGGTGTGCTGA+AGG | + | chr2.2:3502746-3502765 | MS.gene051979:CDS | 45.0% | |
CGACCGTAGTAACCTTTGTT+AGG | - | chr2.2:3503372-3503391 | None:intergenic | 45.0% | |
GAAGGACACAACAGCATCAT+TGG | - | chr2.2:3503484-3503503 | None:intergenic | 45.0% | |
GCCCATTTCACACATGAAAC+TGG | + | chr2.2:3503067-3503086 | MS.gene051979:CDS | 45.0% | |
GCCCCTAACAAAGGTTACTA+CGG | + | chr2.2:3503366-3503385 | MS.gene051979:CDS | 45.0% | |
TAATGGTTGCACCAAAGCCT+TGG | - | chr2.2:3503554-3503573 | None:intergenic | 45.0% | |
TTTGGATGACTCCAAACGTG+AGG | + | chr2.2:3503030-3503049 | MS.gene051979:CDS | 45.0% | |
! | AAGGCTTTGGTGCAACCATT+AGG | + | chr2.2:3503553-3503572 | MS.gene051979:CDS | 45.0% |
! | AGGCTTTGGTGCAACCATTA+GGG | + | chr2.2:3503554-3503573 | MS.gene051979:CDS | 45.0% |
! | GTGGACCGATTCAACTATCT+TGG | + | chr2.2:3503391-3503410 | MS.gene051979:CDS | 45.0% |
! | TAACCTTTGTTAGGGGCACA+TGG | - | chr2.2:3503363-3503382 | None:intergenic | 45.0% |
!! | GTTTGGTAGGTCTGGTTCTT+TGG | + | chr2.2:3503012-3503031 | MS.gene051979:CDS | 45.0% |
!! | TAGGCAAACTTGGTGGTGTT+TGG | - | chr2.2:3502856-3502875 | None:intergenic | 45.0% |
ACACGAGTCTGAACTGTGGT+TGG | - | chr2.2:3503615-3503634 | None:intergenic | 50.0% | |
ACCAACACGAGTCTGAACTG+TGG | - | chr2.2:3503619-3503638 | None:intergenic | 50.0% | |
ACCACAGTTCAGACTCGTGT+TGG | + | chr2.2:3503615-3503634 | MS.gene051979:CDS | 50.0% | |
CACGAGTCTGAACTGTGGTT+GGG | - | chr2.2:3503614-3503633 | None:intergenic | 50.0% | |
GAGTGTGTTGCAGCCAATAC+GGG | + | chr2.2:3502768-3502787 | MS.gene051979:CDS | 50.0% | |
GCATCATTGGCCACTGTTTC+AGG | - | chr2.2:3503471-3503490 | None:intergenic | 50.0% | |
GGAGTGTGTTGCAGCCAATA+CGG | + | chr2.2:3502767-3502786 | MS.gene051979:CDS | 50.0% | |
GGTGATGCATATTGTGGCAC+AGG | + | chr2.2:3502803-3502822 | MS.gene051979:CDS | 50.0% | |
GGTGTTTGGCCTGCATAACA+AGG | - | chr2.2:3502842-3502861 | None:intergenic | 50.0% | |
TGTGGCACAGGATGCAAACA+AGG | + | chr2.2:3502815-3502834 | MS.gene051979:CDS | 50.0% | |
! | CAAGCTGATTCTAGCTGTGC+AGG | + | chr2.2:3502935-3502954 | MS.gene051979:CDS | 50.0% |
! | GGTGTCATCAACCAAGGCTT+TGG | + | chr2.2:3503540-3503559 | MS.gene051979:CDS | 50.0% |
! | TGCAGCCAATACGGGTATTG+TGG | + | chr2.2:3502776-3502795 | MS.gene051979:CDS | 50.0% |
AGCAGCTGCAACCTCACGTT+TGG | - | chr2.2:3503044-3503063 | None:intergenic | 55.0% | |
GGACCAGCTGGAAGAGACAA+TGG | + | chr2.2:3503426-3503445 | MS.gene051979:CDS | 55.0% | |
TGGCCATGTGCCCCTAACAA+AGG | + | chr2.2:3503357-3503376 | MS.gene051979:CDS | 55.0% | |
!! | AGTGAGTTGGGTGTTGCTCC+TGG | + | chr2.2:3503657-3503676 | MS.gene051979:CDS | 55.0% |
!! | GTGCACGGTGTCATCAACCA+AGG | + | chr2.2:3503534-3503553 | MS.gene051979:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 3502650 | 3503698 | 3502650 | ID=MS.gene051979 |
chr2.2 | mRNA | 3502650 | 3503698 | 3502650 | ID=MS.gene051979.t1;Parent=MS.gene051979 |
chr2.2 | exon | 3502650 | 3503091 | 3502650 | ID=MS.gene051979.t1.exon1;Parent=MS.gene051979.t1 |
chr2.2 | CDS | 3502650 | 3503091 | 3502650 | ID=cds.MS.gene051979.t1;Parent=MS.gene051979.t1 |
chr2.2 | exon | 3503292 | 3503698 | 3503292 | ID=MS.gene051979.t1.exon2;Parent=MS.gene051979.t1 |
chr2.2 | CDS | 3503292 | 3503698 | 3503292 | ID=cds.MS.gene051979.t1;Parent=MS.gene051979.t1 |
Gene Sequence |
Protein sequence |