Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056982.t1 | ACL36992.1 | 98.9 | 282 | 3 | 0 | 1 | 282 | 1 | 282 | 4.90E-158 | 567 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056982.t1 | P27054 | 73.2 | 280 | 64 | 4 | 4 | 282 | 1 | 270 | 3.6e-109 | 396.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056982.t1 | B8Y647 | 98.9 | 282 | 3 | 0 | 1 | 282 | 1 | 282 | 3.5e-158 | 567.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051979 | MS.gene056982 | 0.995666 | 1.33E-218 | -1.69E-46 |
MS.gene056982 | MS.gene063685 | 0.801067 | 1.07E-48 | -1.69E-46 |
MS.gene056982 | MS.gene62676 | 0.806761 | 7.03E-50 | -1.69E-46 |
MS.gene056982 | MS.gene73236 | 0.80295 | 4.40E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056982.t1 | MTR_2g099470 | 97.518 | 282 | 7 | 0 | 1 | 282 | 1 | 282 | 0.0 | 576 |
MS.gene056982.t1 | MTR_2g099465 | 70.671 | 283 | 51 | 4 | 3 | 282 | 1 | 254 | 2.09e-142 | 400 |
MS.gene056982.t1 | MTR_8g074350 | 36.957 | 322 | 151 | 9 | 4 | 282 | 1 | 313 | 5.59e-58 | 188 |
MS.gene056982.t1 | MTR_3g118390 | 36.076 | 316 | 148 | 9 | 9 | 282 | 57 | 360 | 6.39e-58 | 190 |
MS.gene056982.t1 | MTR_8g074330 | 37.584 | 298 | 137 | 9 | 30 | 282 | 20 | 313 | 6.08e-54 | 178 |
MS.gene056982.t1 | MTR_7g110780 | 39.241 | 237 | 108 | 6 | 81 | 282 | 36 | 271 | 3.41e-53 | 174 |
MS.gene056982.t1 | MTR_8g074335 | 37.282 | 287 | 140 | 9 | 31 | 282 | 21 | 302 | 4.56e-47 | 160 |
MS.gene056982.t1 | MTR_2g099450 | 80.000 | 80 | 16 | 0 | 1 | 80 | 1 | 80 | 1.42e-41 | 141 |
MS.gene056982.t1 | MTR_2g099450 | 59.167 | 120 | 20 | 2 | 162 | 281 | 84 | 174 | 2.03e-37 | 130 |
MS.gene056982.t1 | MTR_2g034680 | 31.120 | 241 | 121 | 8 | 86 | 282 | 62 | 301 | 2.59e-24 | 100 |
MS.gene056982.t1 | MTR_1g105535 | 27.273 | 253 | 131 | 7 | 78 | 282 | 60 | 307 | 1.89e-20 | 89.7 |
MS.gene056982.t1 | MTR_7g021640 | 25.714 | 315 | 171 | 12 | 14 | 282 | 7 | 304 | 5.23e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056982.t1 | AT3G54420 | 66.667 | 282 | 84 | 3 | 1 | 282 | 2 | 273 | 5.05e-137 | 388 |
MS.gene056982.t1 | AT2G43590 | 56.863 | 255 | 100 | 3 | 28 | 282 | 20 | 264 | 5.78e-106 | 309 |
MS.gene056982.t1 | AT2G43580 | 52.941 | 255 | 111 | 3 | 28 | 282 | 20 | 265 | 1.31e-96 | 285 |
MS.gene056982.t1 | AT2G43570 | 50.000 | 284 | 121 | 8 | 6 | 282 | 8 | 277 | 8.21e-89 | 266 |
MS.gene056982.t1 | AT2G43620 | 45.683 | 278 | 130 | 8 | 18 | 282 | 14 | 283 | 8.47e-83 | 250 |
MS.gene056982.t1 | AT2G43610 | 44.718 | 284 | 138 | 7 | 10 | 282 | 6 | 281 | 2.28e-82 | 249 |
MS.gene056982.t1 | AT3G47540 | 45.982 | 224 | 98 | 5 | 60 | 282 | 13 | 214 | 9.29e-62 | 194 |
MS.gene056982.t1 | AT1G56680 | 39.068 | 279 | 150 | 11 | 15 | 282 | 11 | 280 | 2.01e-59 | 191 |
MS.gene056982.t1 | AT1G56680 | 39.068 | 279 | 150 | 11 | 15 | 282 | 34 | 303 | 4.87e-59 | 190 |
MS.gene056982.t1 | AT3G47540 | 44.796 | 221 | 99 | 5 | 60 | 279 | 13 | 211 | 3.04e-57 | 185 |
MS.gene056982.t1 | AT3G12500 | 39.286 | 280 | 132 | 6 | 37 | 282 | 45 | 320 | 1.66e-55 | 182 |
MS.gene056982.t1 | AT2G43600 | 35.563 | 284 | 160 | 11 | 11 | 282 | 1 | 273 | 8.07e-54 | 176 |
MS.gene056982.t1 | AT2G43600 | 35.439 | 285 | 161 | 11 | 10 | 282 | 21 | 294 | 1.69e-53 | 176 |
MS.gene056982.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 29 | 265 | 1.52e-52 | 173 |
MS.gene056982.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 75 | 311 | 3.13e-52 | 173 |
MS.gene056982.t1 | AT1G02360 | 39.496 | 238 | 108 | 5 | 80 | 282 | 81 | 317 | 3.43e-52 | 173 |
MS.gene056982.t1 | AT4G01700 | 38.912 | 239 | 110 | 5 | 79 | 282 | 36 | 273 | 8.13e-50 | 166 |
MS.gene056982.t1 | AT1G05850 | 22.500 | 320 | 175 | 10 | 11 | 282 | 10 | 304 | 1.67e-20 | 89.7 |
MS.gene056982.t1 | AT1G05850 | 22.500 | 320 | 175 | 10 | 11 | 282 | 10 | 304 | 1.67e-20 | 89.7 |
MS.gene056982.t1 | AT3G16920 | 27.530 | 247 | 133 | 9 | 81 | 282 | 68 | 313 | 2.03e-19 | 87.0 |
MS.gene056982.t1 | AT3G16920 | 27.530 | 247 | 133 | 9 | 81 | 282 | 92 | 337 | 2.22e-19 | 87.0 |
Find 76 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATCATTGGCCACTGTTTC+AGG | 0.200039 | 2.1:-5133186 | None:intergenic |
GTTTGGTAGGTCTGGTTCTT+TGG | 0.220014 | 2.1:+5132730 | MS.gene056982:CDS |
CGACCGTAGTAACCTTTGTT+AGG | 0.286313 | 2.1:-5133087 | None:intergenic |
CTATCTTGGAACTACAACTA+TGG | 0.300245 | 2.1:+5133123 | MS.gene056982:CDS |
TCATCACAGTAGTCCTTTGA+TGG | 0.329355 | 2.1:-5133039 | None:intergenic |
GCCCATTTCACACATGAAAC+TGG | 0.337434 | 2.1:+5132785 | MS.gene056982:CDS |
AAGGCTTTGGTGCAACCATT+AGG | 0.341342 | 2.1:+5133271 | MS.gene056982:CDS |
CTCAATTCTTATAATCAGTT+TGG | 0.343244 | 2.1:+5132713 | MS.gene056982:CDS |
TATAATCAGTTTGGTAGGTC+TGG | 0.352546 | 2.1:+5132722 | MS.gene056982:CDS |
TCAAGACAGCATTATGGTAT+TGG | 0.355700 | 2.1:+5133220 | MS.gene056982:CDS |
GTCCAGTTTCATGTGTGAAA+TGG | 0.356084 | 2.1:-5132787 | None:intergenic |
GCAACCATTAGGGCTATTAA+TGG | 0.385855 | 2.1:+5133282 | MS.gene056982:CDS |
TGTCCTTCAAGACAGCATTA+TGG | 0.387076 | 2.1:+5133214 | MS.gene056982:CDS |
TGCTATACCGAAGAGATTGA+TGG | 0.389108 | 2.1:+5133015 | MS.gene056982:CDS |
AGCAGCTGCAACCTCACGTT+TGG | 0.392131 | 2.1:-5132759 | None:intergenic |
ATACCATAATGCTGTCTTGA+AGG | 0.394568 | 2.1:-5133217 | None:intergenic |
AGGCTTTGGTGCAACCATTA+GGG | 0.395270 | 2.1:+5133272 | MS.gene056982:CDS |
TAGGCAAACTTGGTGGTGTT+TGG | 0.406151 | 2.1:-5132571 | None:intergenic |
GCCACATTAGCATCATTGTT+AGG | 0.421338 | 2.1:-5132590 | None:intergenic |
GACCGTAGTAACCTTTGTTA+GGG | 0.424083 | 2.1:-5133086 | None:intergenic |
CTCTCATAATATGACTATGA+TGG | 0.427890 | 2.1:+5132358 | None:intergenic |
GAAGGACACAACAGCATCAT+TGG | 0.428454 | 2.1:-5133199 | None:intergenic |
TATTGAAGAATTCTTGTGTA+AGG | 0.434772 | 2.1:-5132619 | None:intergenic |
TCGACCATTAATAGCCCTAA+TGG | 0.441150 | 2.1:-5133286 | None:intergenic |
TCCAGTTTCATGTGTGAAAT+GGG | 0.442834 | 2.1:-5132786 | None:intergenic |
GCATCATTGTTAGGCAAACT+TGG | 0.445718 | 2.1:-5132581 | None:intergenic |
GGTGTCATCAACCAAGGCTT+TGG | 0.445762 | 2.1:+5133258 | MS.gene056982:CDS |
GCTAGCTAGCTTAGCAAGTA+AGG | 0.447017 | 2.1:-5133404 | None:intergenic |
GTGGACCGATTCAACTATCT+TGG | 0.452579 | 2.1:+5133109 | MS.gene056982:CDS |
AGTGAGTTGGGTGTTGCTCC+TGG | 0.457642 | 2.1:+5133375 | MS.gene056982:CDS |
CAAATCACTAAGCATATGTA+TGG | 0.459351 | 2.1:+5132385 | MS.gene056982:CDS |
CAAGCTGATTCTAGCTGTGC+AGG | 0.462495 | 2.1:+5132653 | MS.gene056982:CDS |
CACTCAATATTGTAGTGAGT+TGG | 0.467919 | 2.1:+5133362 | MS.gene056982:CDS |
AAACTGATTATAAGAATTGA+GGG | 0.470862 | 2.1:-5132711 | None:intergenic |
GGAGTGTGTTGCAGCCAATA+CGG | 0.476582 | 2.1:+5132485 | MS.gene056982:CDS |
CAAACTGATTATAAGAATTG+AGG | 0.480529 | 2.1:-5132712 | None:intergenic |
CATTACCACAATACCCGTAT+TGG | 0.482956 | 2.1:-5132499 | None:intergenic |
TGATGGACCATCAATCTCTT+CGG | 0.485027 | 2.1:-5133022 | None:intergenic |
ACTCAATATTGTAGTGAGTT+GGG | 0.486051 | 2.1:+5133363 | MS.gene056982:CDS |
CAATACGGGTATTGTGGTAA+TGG | 0.497456 | 2.1:+5132500 | MS.gene056982:CDS |
TAGTTCCAAGATAGTTGAAT+CGG | 0.500260 | 2.1:-5133114 | None:intergenic |
TAATGGTTGCACCAAAGCCT+TGG | 0.502879 | 2.1:-5133269 | None:intergenic |
AACTACAACTATGGACCAGC+TGG | 0.503629 | 2.1:+5133132 | MS.gene056982:CDS |
AAACAAGGTCCTTGTTATGC+AGG | 0.505585 | 2.1:+5132548 | MS.gene056982:CDS |
TCTCATAATATGACTATGAT+GGG | 0.507140 | 2.1:+5132359 | None:intergenic |
ATTCTTATAATCAGTTTGGT+AGG | 0.512286 | 2.1:+5132717 | MS.gene056982:CDS |
ACACGAGTCTGAACTGTGGT+TGG | 0.517796 | 2.1:-5133330 | None:intergenic |
GAGTGTGTTGCAGCCAATAC+GGG | 0.522073 | 2.1:+5132486 | MS.gene056982:CDS |
CACGAGTCTGAACTGTGGTT+GGG | 0.536022 | 2.1:-5133329 | None:intergenic |
AAACCATTGTCTCTTCCAGC+TGG | 0.544197 | 2.1:-5133147 | None:intergenic |
ATGTTAGTGCTCAAAATTGT+GGG | 0.550523 | 2.1:+5132453 | MS.gene056982:CDS |
AACAAAGGTTACTACGGTCG+TGG | 0.552838 | 2.1:+5133090 | MS.gene056982:CDS |
TAACCTTTGTTAGGGGCACA+TGG | 0.560210 | 2.1:-5133078 | None:intergenic |
TGCAGCCAATACGGGTATTG+TGG | 0.572631 | 2.1:+5132494 | MS.gene056982:CDS |
GGTGATGCATATTGTGGCAC+AGG | 0.573444 | 2.1:+5132521 | MS.gene056982:CDS |
CAAAATTGTGGGTGTGCTGA+AGG | 0.577261 | 2.1:+5132464 | MS.gene056982:CDS |
AATGTTAGTGCTCAAAATTG+TGG | 0.577445 | 2.1:+5132452 | MS.gene056982:CDS |
AGAGATTGATGGTCCATCAA+AGG | 0.581585 | 2.1:+5133026 | MS.gene056982:CDS |
ACCACAGTTCAGACTCGTGT+TGG | 0.593974 | 2.1:+5133333 | MS.gene056982:CDS |
TGTGGCACAGGATGCAAACA+AGG | 0.594512 | 2.1:+5132533 | MS.gene056982:CDS |
GCCTAACAATGATGCTAATG+TGG | 0.604947 | 2.1:+5132589 | MS.gene056982:CDS |
GCCCCTAACAAAGGTTACTA+CGG | 0.616806 | 2.1:+5133084 | MS.gene056982:CDS |
TGGCCATGTGCCCCTAACAA+AGG | 0.618946 | 2.1:+5133075 | MS.gene056982:CDS |
ATTGAACACTCCTGAAACAG+TGG | 0.620125 | 2.1:+5133176 | MS.gene056982:CDS |
TCATTGTTAGGCAAACTTGG+TGG | 0.622467 | 2.1:-5132578 | None:intergenic |
GGTGTTTGGCCTGCATAACA+AGG | 0.624350 | 2.1:-5132557 | None:intergenic |
GGACCAGCTGGAAGAGACAA+TGG | 0.624670 | 2.1:+5133144 | MS.gene056982:CDS |
TTTGGATGACTCCAAACGTG+AGG | 0.624768 | 2.1:+5132748 | MS.gene056982:CDS |
TAGCAAGTAAGGTTATCACC+AGG | 0.638426 | 2.1:-5133393 | None:intergenic |
GGTAATGGTGATGCATATTG+TGG | 0.652622 | 2.1:+5132515 | MS.gene056982:CDS |
AATGGTCGACTTGAATGTGA+TGG | 0.664152 | 2.1:+5133300 | MS.gene056982:CDS |
ACCGTAGTAACCTTTGTTAG+GGG | 0.669486 | 2.1:-5133085 | None:intergenic |
GTGCACGGTGTCATCAACCA+AGG | 0.695993 | 2.1:+5133252 | MS.gene056982:CDS |
TATTGGATGAATAATGTGCA+CGG | 0.742029 | 2.1:+5133237 | MS.gene056982:CDS |
GTGATGAAAACAACACAGAG+TGG | 0.752581 | 2.1:+5133055 | MS.gene056982:CDS |
ACCAACACGAGTCTGAACTG+TGG | 0.761414 | 2.1:-5133334 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAATTTGTTATCAAATT+TGG | + | chr2.1:5132895-5132914 | MS.gene056982:intron | 10.0% |
!! | AAACTGATTATAAGAATTGA+GGG | - | chr2.1:5132714-5132733 | None:intergenic | 20.0% |
!! | AACCATGATCATAATAAAAA+AGG | - | chr2.1:5132426-5132445 | None:intergenic | 20.0% |
! | ATTCTTATAATCAGTTTGGT+AGG | + | chr2.1:5132717-5132736 | MS.gene056982:CDS | 25.0% |
! | CAAACTGATTATAAGAATTG+AGG | - | chr2.1:5132715-5132734 | None:intergenic | 25.0% |
! | CTCAATTCTTATAATCAGTT+TGG | + | chr2.1:5132713-5132732 | MS.gene056982:CDS | 25.0% |
! | TATTGAAGAATTCTTGTGTA+AGG | - | chr2.1:5132622-5132641 | None:intergenic | 25.0% |
!! | TTTTGAGCACTAACATTTTT+TGG | - | chr2.1:5132449-5132468 | None:intergenic | 25.0% |
!!! | AGCCTTTTTTATTATGATCA+TGG | + | chr2.1:5132421-5132440 | MS.gene056982:CDS | 25.0% |
!!! | CGTTAATTTTGTTTAGTTGT+TGG | - | chr2.1:5132854-5132873 | None:intergenic | 25.0% |
AAATTTGGTTACACAACTGT+TGG | + | chr2.1:5132910-5132929 | MS.gene056982:intron | 30.0% | |
AATGTTAGTGCTCAAAATTG+TGG | + | chr2.1:5132452-5132471 | MS.gene056982:CDS | 30.0% | |
AATTTGGTTACACAACTGTT+GGG | + | chr2.1:5132911-5132930 | MS.gene056982:intron | 30.0% | |
ACTCAATATTGTAGTGAGTT+GGG | + | chr2.1:5133363-5133382 | MS.gene056982:CDS | 30.0% | |
ATGTTAGTGCTCAAAATTGT+GGG | + | chr2.1:5132453-5132472 | MS.gene056982:CDS | 30.0% | |
CAAATCACTAAGCATATGTA+TGG | + | chr2.1:5132385-5132404 | MS.gene056982:CDS | 30.0% | |
TAGTTCCAAGATAGTTGAAT+CGG | - | chr2.1:5133117-5133136 | None:intergenic | 30.0% | |
TATTGGATGAATAATGTGCA+CGG | + | chr2.1:5133237-5133256 | MS.gene056982:CDS | 30.0% | |
ATACCATAATGCTGTCTTGA+AGG | - | chr2.1:5133220-5133239 | None:intergenic | 35.0% | |
CACTCAATATTGTAGTGAGT+TGG | + | chr2.1:5133362-5133381 | MS.gene056982:CDS | 35.0% | |
CTATCTTGGAACTACAACTA+TGG | + | chr2.1:5133123-5133142 | MS.gene056982:CDS | 35.0% | |
TATAATCAGTTTGGTAGGTC+TGG | + | chr2.1:5132722-5132741 | MS.gene056982:CDS | 35.0% | |
TCAAGACAGCATTATGGTAT+TGG | + | chr2.1:5133220-5133239 | MS.gene056982:CDS | 35.0% | |
TCCAGTTTCATGTGTGAAAT+GGG | - | chr2.1:5132789-5132808 | None:intergenic | 35.0% | |
ACCGTAGTAACCTTTGTTAG+GGG | - | chr2.1:5133088-5133107 | None:intergenic | 40.0% | |
ATTGAACACTCCTGAAACAG+TGG | + | chr2.1:5133176-5133195 | MS.gene056982:CDS | 40.0% | |
CATTACCACAATACCCGTAT+TGG | - | chr2.1:5132502-5132521 | None:intergenic | 40.0% | |
GACCGTAGTAACCTTTGTTA+GGG | - | chr2.1:5133089-5133108 | None:intergenic | 40.0% | |
GCAACCATTAGGGCTATTAA+TGG | + | chr2.1:5133282-5133301 | MS.gene056982:CDS | 40.0% | |
GCATCATTGTTAGGCAAACT+TGG | - | chr2.1:5132584-5132603 | None:intergenic | 40.0% | |
GCCACATTAGCATCATTGTT+AGG | - | chr2.1:5132593-5132612 | None:intergenic | 40.0% | |
GCCTAACAATGATGCTAATG+TGG | + | chr2.1:5132589-5132608 | MS.gene056982:CDS | 40.0% | |
GTCCAGTTTCATGTGTGAAA+TGG | - | chr2.1:5132790-5132809 | None:intergenic | 40.0% | |
GTGATGAAAACAACACAGAG+TGG | + | chr2.1:5133055-5133074 | MS.gene056982:CDS | 40.0% | |
TAGCAAGTAAGGTTATCACC+AGG | - | chr2.1:5133396-5133415 | None:intergenic | 40.0% | |
TCATCACAGTAGTCCTTTGA+TGG | - | chr2.1:5133042-5133061 | None:intergenic | 40.0% | |
TCATTGTTAGGCAAACTTGG+TGG | - | chr2.1:5132581-5132600 | None:intergenic | 40.0% | |
TCGACCATTAATAGCCCTAA+TGG | - | chr2.1:5133289-5133308 | None:intergenic | 40.0% | |
TGCTATACCGAAGAGATTGA+TGG | + | chr2.1:5133015-5133034 | MS.gene056982:CDS | 40.0% | |
TGTCCTTCAAGACAGCATTA+TGG | + | chr2.1:5133214-5133233 | MS.gene056982:CDS | 40.0% | |
! | AAACAAGGTCCTTGTTATGC+AGG | + | chr2.1:5132548-5132567 | MS.gene056982:CDS | 40.0% |
! | AGAGATTGATGGTCCATCAA+AGG | + | chr2.1:5133026-5133045 | MS.gene056982:CDS | 40.0% |
! | CAATACGGGTATTGTGGTAA+TGG | + | chr2.1:5132500-5132519 | MS.gene056982:CDS | 40.0% |
! | GGTAATGGTGATGCATATTG+TGG | + | chr2.1:5132515-5132534 | MS.gene056982:CDS | 40.0% |
! | TGATGGACCATCAATCTCTT+CGG | - | chr2.1:5133025-5133044 | None:intergenic | 40.0% |
!! | AATGGTCGACTTGAATGTGA+TGG | + | chr2.1:5133300-5133319 | MS.gene056982:CDS | 40.0% |
!!! | GGAAGAGACAATGGTTTTGA+TGG | + | chr2.1:5133153-5133172 | MS.gene056982:CDS | 40.0% |
AAACCATTGTCTCTTCCAGC+TGG | - | chr2.1:5133150-5133169 | None:intergenic | 45.0% | |
AACAAAGGTTACTACGGTCG+TGG | + | chr2.1:5133090-5133109 | MS.gene056982:CDS | 45.0% | |
AACTACAACTATGGACCAGC+TGG | + | chr2.1:5133132-5133151 | MS.gene056982:CDS | 45.0% | |
CAAAATTGTGGGTGTGCTGA+AGG | + | chr2.1:5132464-5132483 | MS.gene056982:CDS | 45.0% | |
CGACCGTAGTAACCTTTGTT+AGG | - | chr2.1:5133090-5133109 | None:intergenic | 45.0% | |
GAAGGACACAACAGCATCAT+TGG | - | chr2.1:5133202-5133221 | None:intergenic | 45.0% | |
GCCCATTTCACACATGAAAC+TGG | + | chr2.1:5132785-5132804 | MS.gene056982:CDS | 45.0% | |
GCCCCTAACAAAGGTTACTA+CGG | + | chr2.1:5133084-5133103 | MS.gene056982:CDS | 45.0% | |
TAATGGTTGCACCAAAGCCT+TGG | - | chr2.1:5133272-5133291 | None:intergenic | 45.0% | |
TTTGGATGACTCCAAACGTG+AGG | + | chr2.1:5132748-5132767 | MS.gene056982:CDS | 45.0% | |
! | AAGGCTTTGGTGCAACCATT+AGG | + | chr2.1:5133271-5133290 | MS.gene056982:CDS | 45.0% |
! | AGGCTTTGGTGCAACCATTA+GGG | + | chr2.1:5133272-5133291 | MS.gene056982:CDS | 45.0% |
! | GTGGACCGATTCAACTATCT+TGG | + | chr2.1:5133109-5133128 | MS.gene056982:CDS | 45.0% |
! | TAACCTTTGTTAGGGGCACA+TGG | - | chr2.1:5133081-5133100 | None:intergenic | 45.0% |
!! | GTTTGGTAGGTCTGGTTCTT+TGG | + | chr2.1:5132730-5132749 | MS.gene056982:CDS | 45.0% |
!! | TAGGCAAACTTGGTGGTGTT+TGG | - | chr2.1:5132574-5132593 | None:intergenic | 45.0% |
ACACGAGTCTGAACTGTGGT+TGG | - | chr2.1:5133333-5133352 | None:intergenic | 50.0% | |
ACCAACACGAGTCTGAACTG+TGG | - | chr2.1:5133337-5133356 | None:intergenic | 50.0% | |
ACCACAGTTCAGACTCGTGT+TGG | + | chr2.1:5133333-5133352 | MS.gene056982:CDS | 50.0% | |
CACGAGTCTGAACTGTGGTT+GGG | - | chr2.1:5133332-5133351 | None:intergenic | 50.0% | |
GAGTGTGTTGCAGCCAATAC+GGG | + | chr2.1:5132486-5132505 | MS.gene056982:CDS | 50.0% | |
GCATCATTGGCCACTGTTTC+AGG | - | chr2.1:5133189-5133208 | None:intergenic | 50.0% | |
GGAGTGTGTTGCAGCCAATA+CGG | + | chr2.1:5132485-5132504 | MS.gene056982:CDS | 50.0% | |
GGTGATGCATATTGTGGCAC+AGG | + | chr2.1:5132521-5132540 | MS.gene056982:CDS | 50.0% | |
GGTGTTTGGCCTGCATAACA+AGG | - | chr2.1:5132560-5132579 | None:intergenic | 50.0% | |
TGTGGCACAGGATGCAAACA+AGG | + | chr2.1:5132533-5132552 | MS.gene056982:CDS | 50.0% | |
! | CAAGCTGATTCTAGCTGTGC+AGG | + | chr2.1:5132653-5132672 | MS.gene056982:CDS | 50.0% |
! | GGTGTCATCAACCAAGGCTT+TGG | + | chr2.1:5133258-5133277 | MS.gene056982:CDS | 50.0% |
! | TGCAGCCAATACGGGTATTG+TGG | + | chr2.1:5132494-5132513 | MS.gene056982:CDS | 50.0% |
AGCAGCTGCAACCTCACGTT+TGG | - | chr2.1:5132762-5132781 | None:intergenic | 55.0% | |
GGACCAGCTGGAAGAGACAA+TGG | + | chr2.1:5133144-5133163 | MS.gene056982:CDS | 55.0% | |
TGGCCATGTGCCCCTAACAA+AGG | + | chr2.1:5133075-5133094 | MS.gene056982:CDS | 55.0% | |
!! | AGTGAGTTGGGTGTTGCTCC+TGG | + | chr2.1:5133375-5133394 | MS.gene056982:CDS | 55.0% |
!! | GTGCACGGTGTCATCAACCA+AGG | + | chr2.1:5133252-5133271 | MS.gene056982:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 5132368 | 5133416 | 5132368 | ID=MS.gene056982 |
chr2.1 | mRNA | 5132368 | 5133416 | 5132368 | ID=MS.gene056982.t1;Parent=MS.gene056982 |
chr2.1 | exon | 5132368 | 5132809 | 5132368 | ID=MS.gene056982.t1.exon1;Parent=MS.gene056982.t1 |
chr2.1 | CDS | 5132368 | 5132809 | 5132368 | ID=cds.MS.gene056982.t1;Parent=MS.gene056982.t1 |
chr2.1 | exon | 5133010 | 5133416 | 5133010 | ID=MS.gene056982.t1.exon2;Parent=MS.gene056982.t1 |
chr2.1 | CDS | 5133010 | 5133416 | 5133010 | ID=cds.MS.gene056982.t1;Parent=MS.gene056982.t1 |
Gene Sequence |
Protein sequence |