Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62676.t1 | RHN43814.1 | 97.1 | 481 | 13 | 1 | 1 | 480 | 1 | 481 | 2.30E-277 | 964.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62676.t1 | Q8L612 | 58.1 | 501 | 184 | 9 | 5 | 480 | 8 | 507 | 2.9e-167 | 590.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62676.t1 | A0A072TVF0 | 97.1 | 481 | 13 | 1 | 1 | 480 | 1 | 481 | 1.7e-277 | 964.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene62676 | 0.870057 | 1.94E-66 | -1.69E-46 |
| MS.gene049197 | MS.gene62676 | 0.823792 | 1.14E-53 | -1.69E-46 |
| MS.gene04919 | MS.gene62676 | 0.862305 | 5.57E-64 | -1.69E-46 |
| MS.gene04920 | MS.gene62676 | 0.876056 | 1.89E-68 | -1.69E-46 |
| MS.gene049254 | MS.gene62676 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene62676 | 0.866321 | 3.11E-65 | -1.69E-46 |
| MS.gene049419 | MS.gene62676 | -0.80474 | 1.87E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene62676 | 0.86227 | 5.71E-64 | -1.69E-46 |
| MS.gene049652 | MS.gene62676 | 0.825436 | 4.69E-54 | -1.69E-46 |
| MS.gene049680 | MS.gene62676 | 0.854112 | 1.53E-61 | -1.69E-46 |
| MS.gene049983 | MS.gene62676 | 0.833625 | 4.79E-56 | -1.69E-46 |
| MS.gene04998 | MS.gene62676 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene62676 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene62676 | 0.821405 | 4.11E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene62676 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene62676 | 0.809141 | 2.19E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene62676 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene62676 | 0.840201 | 1.00E-57 | -1.69E-46 |
| MS.gene050955 | MS.gene62676 | 0.803284 | 3.75E-49 | -1.69E-46 |
| MS.gene050961 | MS.gene62676 | 0.811185 | 7.94E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene62676 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene051043 | MS.gene62676 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene051154 | MS.gene62676 | 0.835434 | 1.68E-56 | -1.69E-46 |
| MS.gene051343 | MS.gene62676 | 0.812725 | 3.67E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene62676 | 0.82766 | 1.38E-54 | -1.69E-46 |
| MS.gene051676 | MS.gene62676 | 0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene62676 | 0.890423 | 9.98E-74 | -1.69E-46 |
| MS.gene051831 | MS.gene62676 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene051832 | MS.gene62676 | 0.838932 | 2.14E-57 | -1.69E-46 |
| MS.gene051959 | MS.gene62676 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene051960 | MS.gene62676 | 0.841468 | 4.67E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene62676 | 0.832383 | 9.76E-56 | -1.69E-46 |
| MS.gene051979 | MS.gene62676 | 0.805835 | 1.10E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene62676 | 0.801902 | 7.23E-49 | -1.69E-46 |
| MS.gene052053 | MS.gene62676 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene62676 | 0.815298 | 9.93E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene62676 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene052296 | MS.gene62676 | 0.823831 | 1.12E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene62676 | 0.864955 | 8.38E-65 | -1.69E-46 |
| MS.gene052559 | MS.gene62676 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene052685 | MS.gene62676 | 0.83958 | 1.46E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene62676 | 0.855466 | 6.19E-62 | -1.69E-46 |
| MS.gene052888 | MS.gene62676 | 0.809461 | 1.87E-50 | -1.69E-46 |
| MS.gene052889 | MS.gene62676 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene052890 | MS.gene62676 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene053045 | MS.gene62676 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene62676 | 0.839738 | 1.32E-57 | -1.69E-46 |
| MS.gene053189 | MS.gene62676 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene053228 | MS.gene62676 | 0.828635 | 8.06E-55 | -1.69E-46 |
| MS.gene053272 | MS.gene62676 | -0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene053295 | MS.gene62676 | 0.810466 | 1.14E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene62676 | 0.844066 | 9.52E-59 | -1.69E-46 |
| MS.gene053340 | MS.gene62676 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene62676 | 0.815088 | 1.11E-51 | -1.69E-46 |
| MS.gene053602 | MS.gene62676 | 0.805037 | 1.62E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene62676 | 0.853523 | 2.26E-61 | -1.69E-46 |
| MS.gene053931 | MS.gene62676 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene62676 | 0.885025 | 1.16E-71 | -1.69E-46 |
| MS.gene054222 | MS.gene62676 | 0.87383 | 1.08E-67 | -1.69E-46 |
| MS.gene05439 | MS.gene62676 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene054413 | MS.gene62676 | 0.806461 | 8.14E-50 | -1.69E-46 |
| MS.gene054490 | MS.gene62676 | 0.806198 | 9.24E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene62676 | 0.805743 | 1.15E-49 | -1.69E-46 |
| MS.gene054684 | MS.gene62676 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene05469 | MS.gene62676 | 0.823058 | 1.70E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene62676 | 0.883896 | 3.04E-71 | -1.69E-46 |
| MS.gene054893 | MS.gene62676 | 0.88599 | 5.05E-72 | -1.69E-46 |
| MS.gene054957 | MS.gene62676 | 0.85714 | 2.00E-62 | -1.69E-46 |
| MS.gene054960 | MS.gene62676 | 0.803114 | 4.07E-49 | -1.69E-46 |
| MS.gene055147 | MS.gene62676 | 0.842947 | 1.89E-58 | -1.69E-46 |
| MS.gene055148 | MS.gene62676 | 0.834517 | 2.86E-56 | -1.69E-46 |
| MS.gene055149 | MS.gene62676 | 0.808991 | 2.36E-50 | -1.69E-46 |
| MS.gene055150 | MS.gene62676 | 0.895254 | 1.14E-75 | -1.69E-46 |
| MS.gene055226 | MS.gene62676 | 0.815146 | 1.07E-51 | -1.69E-46 |
| MS.gene055229 | MS.gene62676 | 0.830044 | 3.67E-55 | -1.69E-46 |
| MS.gene055801 | MS.gene62676 | 0.83515 | 1.98E-56 | -1.69E-46 |
| MS.gene055841 | MS.gene62676 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene056071 | MS.gene62676 | 0.829829 | 4.14E-55 | -1.69E-46 |
| MS.gene056082 | MS.gene62676 | 0.800844 | 1.19E-48 | -1.69E-46 |
| MS.gene05624 | MS.gene62676 | 0.873584 | 1.31E-67 | -1.69E-46 |
| MS.gene056677 | MS.gene62676 | 0.854947 | 8.76E-62 | -1.69E-46 |
| MS.gene056699 | MS.gene62676 | 0.8515 | 8.52E-61 | -1.69E-46 |
| MS.gene05686 | MS.gene62676 | 0.834156 | 3.53E-56 | -1.69E-46 |
| MS.gene05689 | MS.gene62676 | 0.808185 | 3.51E-50 | -1.69E-46 |
| MS.gene056982 | MS.gene62676 | 0.806761 | 7.03E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene62676 | 0.850373 | 1.77E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene62676 | 0.892672 | 1.28E-74 | -1.69E-46 |
| MS.gene057155 | MS.gene62676 | 0.823118 | 1.65E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene62676 | 0.830383 | 3.03E-55 | -1.69E-46 |
| MS.gene057622 | MS.gene62676 | 0.864751 | 9.71E-65 | -1.69E-46 |
| MS.gene057890 | MS.gene62676 | -0.819292 | 1.25E-52 | -1.69E-46 |
| MS.gene057893 | MS.gene62676 | -0.825317 | 5.01E-54 | -1.69E-46 |
| MS.gene057999 | MS.gene62676 | 0.832528 | 8.98E-56 | -1.69E-46 |
| MS.gene058008 | MS.gene62676 | 0.831463 | 1.65E-55 | -1.69E-46 |
| MS.gene058095 | MS.gene62676 | 0.841359 | 4.99E-58 | -1.69E-46 |
| MS.gene058159 | MS.gene62676 | 0.884825 | 1.38E-71 | -1.69E-46 |
| MS.gene058279 | MS.gene62676 | 0.828549 | 8.45E-55 | -1.69E-46 |
| MS.gene058592 | MS.gene62676 | 0.910955 | 1.05E-82 | -1.69E-46 |
| MS.gene058635 | MS.gene62676 | 0.820655 | 6.12E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene62676 | 0.82335 | 1.45E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene62676 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene05878 | MS.gene62676 | 0.874415 | 6.88E-68 | -1.69E-46 |
| MS.gene059051 | MS.gene62676 | 0.822103 | 2.83E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene62676 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene62676 | 0.838219 | 3.27E-57 | -1.69E-46 |
| MS.gene059436 | MS.gene62676 | 0.815438 | 9.24E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene62676 | 0.912549 | 1.72E-83 | -1.69E-46 |
| MS.gene05956 | MS.gene62676 | 0.846023 | 2.82E-59 | -1.69E-46 |
| MS.gene059774 | MS.gene62676 | 0.822778 | 1.97E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene62676 | -0.899748 | 1.46E-77 | -1.69E-46 |
| MS.gene059901 | MS.gene62676 | -0.856329 | 3.46E-62 | -1.69E-46 |
| MS.gene060012 | MS.gene62676 | 0.825904 | 3.63E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene62676 | 0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene06018 | MS.gene62676 | 0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene06023 | MS.gene62676 | 0.868862 | 4.76E-66 | -1.69E-46 |
| MS.gene060244 | MS.gene62676 | 0.821453 | 4.01E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene62676 | 0.837616 | 4.68E-57 | -1.69E-46 |
| MS.gene060338 | MS.gene62676 | 0.831735 | 1.41E-55 | -1.69E-46 |
| MS.gene060365 | MS.gene62676 | 0.828042 | 1.12E-54 | -1.69E-46 |
| MS.gene060412 | MS.gene62676 | 0.851048 | 1.14E-60 | -1.69E-46 |
| MS.gene060413 | MS.gene62676 | 0.8293 | 5.56E-55 | -1.69E-46 |
| MS.gene060512 | MS.gene62676 | 0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene62676 | 0.81365 | 2.30E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene62676 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene62676 | 0.834184 | 3.47E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene62676 | 0.844174 | 8.90E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene62676 | 0.84882 | 4.80E-60 | -1.69E-46 |
| MS.gene060937 | MS.gene62676 | 0.867367 | 1.44E-65 | -1.69E-46 |
| MS.gene061047 | MS.gene62676 | 0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene62676 | 0.84615 | 2.60E-59 | -1.69E-46 |
| MS.gene061160 | MS.gene62676 | 0.831896 | 1.29E-55 | -1.69E-46 |
| MS.gene061188 | MS.gene62676 | 0.834023 | 3.81E-56 | -1.69E-46 |
| MS.gene061243 | MS.gene62676 | 0.808454 | 3.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39500 | MS.gene62676 | PPI |
| MS.gene32004 | MS.gene62676 | PPI |
| MS.gene002651 | MS.gene62676 | PPI |
| MS.gene45398 | MS.gene62676 | PPI |
| MS.gene26355 | MS.gene62676 | PPI |
| MS.gene004330 | MS.gene62676 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62676.t1 | MTR_8g105700 | 97.089 | 481 | 13 | 1 | 1 | 480 | 1 | 481 | 0.0 | 965 |
| MS.gene62676.t1 | MTR_3g084930 | 49.281 | 487 | 231 | 8 | 7 | 479 | 15 | 499 | 7.86e-158 | 467 |
| MS.gene62676.t1 | MTR_8g097210 | 47.421 | 504 | 238 | 8 | 1 | 479 | 3 | 504 | 3.21e-154 | 457 |
| MS.gene62676.t1 | MTR_2g005730 | 46.521 | 503 | 240 | 8 | 5 | 494 | 11 | 497 | 9.85e-146 | 436 |
| MS.gene62676.t1 | MTR_8g095090 | 44.646 | 495 | 256 | 7 | 6 | 494 | 10 | 492 | 2.20e-130 | 395 |
| MS.gene62676.t1 | MTR_8g097210 | 46.602 | 412 | 206 | 6 | 80 | 479 | 1 | 410 | 1.17e-121 | 371 |
| MS.gene62676.t1 | MTR_4g088500 | 41.517 | 501 | 275 | 7 | 6 | 494 | 22 | 516 | 1.51e-117 | 363 |
| MS.gene62676.t1 | MTR_2g017740 | 41.443 | 485 | 236 | 10 | 9 | 480 | 22 | 471 | 5.16e-110 | 342 |
| MS.gene62676.t1 | MTR_2g005730 | 47.757 | 379 | 176 | 7 | 5 | 370 | 11 | 380 | 8.42e-110 | 337 |
| MS.gene62676.t1 | MTR_8g095090 | 43.868 | 424 | 214 | 8 | 80 | 494 | 1 | 409 | 8.49e-104 | 324 |
| MS.gene62676.t1 | MTR_8g095150 | 39.501 | 481 | 254 | 8 | 6 | 484 | 13 | 458 | 6.96e-99 | 313 |
| MS.gene62676.t1 | MTR_8g105630 | 100.000 | 143 | 0 | 0 | 480 | 622 | 15 | 157 | 2.13e-98 | 298 |
| MS.gene62676.t1 | MTR_8g095140 | 37.791 | 516 | 261 | 11 | 6 | 497 | 13 | 492 | 1.37e-94 | 302 |
| MS.gene62676.t1 | MTR_8g095110 | 38.750 | 480 | 256 | 9 | 6 | 482 | 13 | 457 | 5.81e-94 | 300 |
| MS.gene62676.t1 | MTR_8g095130 | 40.220 | 363 | 190 | 7 | 113 | 465 | 13 | 358 | 3.81e-73 | 243 |
| MS.gene62676.t1 | MTR_8g098410 | 74.126 | 143 | 37 | 0 | 480 | 622 | 82 | 224 | 1.55e-72 | 233 |
| MS.gene62676.t1 | MTR_8g098410 | 74.126 | 143 | 37 | 0 | 480 | 622 | 16 | 158 | 2.19e-72 | 230 |
| MS.gene62676.t1 | MTR_1g014210 | 65.035 | 143 | 50 | 0 | 480 | 622 | 85 | 227 | 7.14e-62 | 205 |
| MS.gene62676.t1 | MTR_8g098400 | 62.179 | 156 | 56 | 1 | 467 | 622 | 10 | 162 | 7.79e-61 | 200 |
| MS.gene62676.t1 | MTR_8g098400 | 62.179 | 156 | 56 | 1 | 467 | 622 | 10 | 162 | 9.53e-61 | 200 |
| MS.gene62676.t1 | MTR_7g094600 | 61.538 | 143 | 55 | 0 | 480 | 622 | 18 | 160 | 1.92e-59 | 196 |
| MS.gene62676.t1 | MTR_5g010340 | 62.585 | 147 | 54 | 1 | 477 | 622 | 15 | 161 | 5.76e-59 | 196 |
| MS.gene62676.t1 | MTR_4g027860 | 41.224 | 245 | 136 | 3 | 242 | 480 | 72 | 314 | 6.92e-56 | 195 |
| MS.gene62676.t1 | MTR_1g072570 | 57.639 | 144 | 60 | 1 | 480 | 622 | 18 | 161 | 1.09e-52 | 178 |
| MS.gene62676.t1 | MTR_7g116350 | 31.447 | 477 | 215 | 14 | 6 | 479 | 336 | 703 | 1.52e-46 | 176 |
| MS.gene62676.t1 | MTR_8g098400 | 63.478 | 115 | 42 | 0 | 508 | 622 | 1 | 115 | 1.23e-45 | 158 |
| MS.gene62676.t1 | MTR_7g094600 | 60.345 | 116 | 46 | 0 | 507 | 622 | 7 | 122 | 1.66e-45 | 157 |
| MS.gene62676.t1 | MTR_8g098410 | 75.000 | 88 | 22 | 0 | 480 | 567 | 82 | 169 | 8.69e-40 | 145 |
| MS.gene62676.t1 | MTR_8g098400 | 58.416 | 101 | 39 | 1 | 467 | 567 | 10 | 107 | 2.39e-31 | 119 |
| MS.gene62676.t1 | MTR_4g027880 | 38.562 | 153 | 91 | 2 | 9 | 159 | 14 | 165 | 7.19e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62676.t1 | AT1G14780 | 58.084 | 501 | 184 | 9 | 5 | 480 | 8 | 507 | 0.0 | 590 |
| MS.gene62676.t1 | AT4G24290 | 45.049 | 515 | 258 | 10 | 6 | 511 | 11 | 509 | 3.32e-137 | 414 |
| MS.gene62676.t1 | AT4G24290 | 45.049 | 515 | 258 | 10 | 6 | 511 | 11 | 509 | 3.32e-137 | 414 |
| MS.gene62676.t1 | AT1G28380 | 43.813 | 493 | 253 | 7 | 6 | 484 | 15 | 497 | 6.74e-123 | 377 |
| MS.gene62676.t1 | AT1G29690 | 40.166 | 483 | 251 | 8 | 6 | 480 | 21 | 473 | 3.27e-115 | 355 |
| MS.gene62676.t1 | AT4G24290 | 45.253 | 316 | 162 | 7 | 6 | 313 | 11 | 323 | 2.63e-81 | 260 |
| MS.gene62676.t1 | AT2G31570 | 74.126 | 143 | 37 | 0 | 480 | 622 | 15 | 157 | 4.64e-72 | 229 |
| MS.gene62676.t1 | AT2G43350 | 73.427 | 143 | 38 | 0 | 480 | 622 | 54 | 196 | 2.57e-71 | 229 |
| MS.gene62676.t1 | AT2G43350 | 73.427 | 143 | 38 | 0 | 480 | 622 | 54 | 196 | 2.57e-71 | 229 |
| MS.gene62676.t1 | AT4G11600 | 64.118 | 170 | 58 | 1 | 456 | 622 | 52 | 221 | 1.49e-70 | 228 |
| MS.gene62676.t1 | AT4G31870 | 69.231 | 143 | 44 | 0 | 480 | 622 | 82 | 224 | 1.47e-66 | 218 |
| MS.gene62676.t1 | AT1G63460 | 61.290 | 155 | 60 | 0 | 468 | 622 | 3 | 157 | 2.95e-63 | 206 |
| MS.gene62676.t1 | AT2G25080 | 65.035 | 143 | 50 | 0 | 480 | 622 | 85 | 227 | 1.78e-62 | 207 |
| MS.gene62676.t1 | AT3G63080 | 65.035 | 143 | 50 | 0 | 480 | 622 | 20 | 162 | 3.97e-61 | 201 |
| MS.gene62676.t1 | AT2G48150 | 65.035 | 143 | 50 | 0 | 480 | 622 | 18 | 160 | 1.17e-60 | 199 |
| MS.gene62676.t1 | AT2G48150 | 65.672 | 134 | 46 | 0 | 489 | 622 | 1 | 134 | 5.33e-57 | 189 |
| MS.gene62676.t1 | AT4G31870 | 68.085 | 47 | 15 | 0 | 480 | 526 | 82 | 128 | 1.25e-14 | 72.8 |
Find 150 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATCACCTCTCTTCTTAA+AGG | 0.136687 | 4.2:+1269419 | MS.gene62676:CDS |
| CGTTTCTTTGAAGCAATAAA+TGG | 0.146797 | 4.2:+1270451 | MS.gene62676:CDS |
| GGGTATTTCAATACAGTATT+TGG | 0.161336 | 4.2:+1266198 | MS.gene62676:CDS |
| TCCCCTCTTTACACATATTA+TGG | 0.199778 | 4.2:-1269315 | None:intergenic |
| TCGACTTGACATCAGATTTC+AGG | 0.226789 | 4.2:+1265684 | MS.gene62676:CDS |
| GATCAGAAAGGAGGAATATT+TGG | 0.230959 | 4.2:+1275960 | MS.gene62676:CDS |
| ATCGGTATTTACATAAAGTT+TGG | 0.231358 | 4.2:-1269954 | None:intergenic |
| GTCTCTAGACTTTGAAATCT+TGG | 0.241499 | 4.2:+1275551 | MS.gene62676:intron |
| GAGCTTTCTGTGCCAGGTTT+TGG | 0.247637 | 4.2:+1265764 | MS.gene62676:CDS |
| TCAATTGCATCTGGTTTGTT+AGG | 0.252614 | 4.2:-1269383 | None:intergenic |
| GACCTTGATCCTTATACTTC+TGG | 0.294629 | 4.2:-1275434 | None:intergenic |
| TTCAAGCTGTTCCTTCTTCA+TGG | 0.298007 | 4.2:+1266346 | MS.gene62676:CDS |
| CCAGCCGCCTTTGATGTCTT+TGG | 0.299845 | 4.2:+1269097 | MS.gene62676:CDS |
| TCTGAGGTTATTGTTCTCTA+AGG | 0.301320 | 4.2:+1270606 | MS.gene62676:CDS |
| GAAAATCAAACATACCTTAT+CGG | 0.325614 | 4.2:-1269972 | None:intergenic |
| CAGTGAAATACAATCCTAAA+TGG | 0.326415 | 4.2:+1270503 | MS.gene62676:CDS |
| TTCTTAAAGGTGCTCCTGGC+AGG | 0.337014 | 4.2:+1269432 | MS.gene62676:CDS |
| TTAGAAAGAAGAAGTGGATA+TGG | 0.339600 | 4.2:-1266315 | None:intergenic |
| TTTCTCACTCTCAATTTAAT+GGG | 0.346071 | 4.2:+1269929 | MS.gene62676:CDS |
| TCAGATTCATCGAGAACTTT+GGG | 0.359267 | 4.2:+1268568 | MS.gene62676:intron |
| ATTCACTGTGGCTGCTCACT+TGG | 0.359395 | 4.2:-1269346 | None:intergenic |
| GTTGACATTAAATGTGATAA+AGG | 0.365745 | 4.2:+1265806 | MS.gene62676:CDS |
| ACAAAGTGTTTAGGTATTGA+TGG | 0.367267 | 4.2:+1266258 | MS.gene62676:CDS |
| TTGGGTTTGATGAGGGTTCA+TGG | 0.369436 | 4.2:+1266217 | MS.gene62676:CDS |
| CTGGTTCCTGTCCACGAAAC+TGG | 0.374855 | 4.2:-1275587 | None:intergenic |
| CATTTAGGATTGTATTTCAC+TGG | 0.381293 | 4.2:-1270502 | None:intergenic |
| TAATAGATGTTCCACGTGTA+TGG | 0.390541 | 4.2:-1270359 | None:intergenic |
| GGTATTTCAATACAGTATTT+GGG | 0.391201 | 4.2:+1266199 | MS.gene62676:CDS |
| CCGCAAATTGTTGCGTTCAA+TGG | 0.394225 | 4.2:+1269121 | MS.gene62676:CDS |
| TAAACTTACATCGAAGATAA+AGG | 0.397739 | 4.2:-1269478 | None:intergenic |
| ATCAGATTCATCGAGAACTT+TGG | 0.399107 | 4.2:+1268567 | MS.gene62676:intron |
| GCAGCTAACACAAAGTGTTT+AGG | 0.401057 | 4.2:+1266249 | MS.gene62676:CDS |
| AAGAATCACTTGGATGATCT+TGG | 0.408794 | 4.2:+1268681 | MS.gene62676:CDS |
| AAAAGAGAGCTTTCTGTGCC+AGG | 0.411773 | 4.2:+1265758 | MS.gene62676:CDS |
| TGTTCTGTACCAGAAGTATA+AGG | 0.413755 | 4.2:+1275425 | MS.gene62676:CDS |
| AAGCTAAAATCAATTGCATC+TGG | 0.418424 | 4.2:-1269392 | None:intergenic |
| ACTACCAAGGATACAAGCTT+TGG | 0.419053 | 4.2:+1269846 | MS.gene62676:CDS |
| TCAAGCTGTTCCTTCTTCAT+GGG | 0.432632 | 4.2:+1266347 | MS.gene62676:CDS |
| TCGGTATTTACATAAAGTTT+GGG | 0.433680 | 4.2:-1269953 | None:intergenic |
| CCATTGAACGCAACAATTTG+CGG | 0.434084 | 4.2:-1269121 | None:intergenic |
| TATTATAGGTTGAAGTCAAT+GGG | 0.436019 | 4.2:+1275904 | MS.gene62676:intron |
| TTGAAGGAATGAAATGCAAC+AGG | 0.437435 | 4.2:+1270124 | MS.gene62676:CDS |
| TTATTATAGGTTGAAGTCAA+TGG | 0.438351 | 4.2:+1275903 | MS.gene62676:intron |
| TTTGGGACTCACATCCTTGT+GGG | 0.445545 | 4.2:+1268585 | MS.gene62676:CDS |
| CTTGGAGAACAGTTATTTAG+TGG | 0.446466 | 4.2:+1268699 | MS.gene62676:CDS |
| CTTAAAGGTGCTCCTGGCAG+GGG | 0.451189 | 4.2:+1269434 | MS.gene62676:CDS |
| GTAATCACCTTATCAAAGAC+TGG | 0.452445 | 4.2:-1275663 | None:intergenic |
| GAGAAAGCTCTTAACAGCTT+AGG | 0.455731 | 4.2:+1265653 | MS.gene62676:CDS |
| GAGCCCAAAGCTTGTATCCT+TGG | 0.456844 | 4.2:-1269850 | None:intergenic |
| TGAATTTCTTCACTAGATCC+TGG | 0.461518 | 4.2:-1275606 | None:intergenic |
| CTACCAAGGATACAAGCTTT+GGG | 0.463104 | 4.2:+1269847 | MS.gene62676:CDS |
| TGAATTCCCAGTCTTTGATA+AGG | 0.466937 | 4.2:+1275656 | MS.gene62676:CDS |
| GGTATGCGTTTGTTTCTTGA+AGG | 0.467322 | 4.2:+1270108 | MS.gene62676:CDS |
| ATCCTTGTGGGTCTTAGCGT+TGG | 0.468179 | 4.2:+1268597 | MS.gene62676:CDS |
| AAATTGAAGACACAACAATA+TGG | 0.471714 | 4.2:+1270407 | MS.gene62676:CDS |
| TCACTGGTGCTGTACATACA+TGG | 0.473147 | 4.2:-1270486 | None:intergenic |
| AGATGTCAGAGTTATTCAAT+AGG | 0.474106 | 4.2:+1266145 | MS.gene62676:intron |
| TCTCTTCTTAAAGGTGCTCC+TGG | 0.475934 | 4.2:+1269428 | MS.gene62676:CDS |
| CTTGTGGGTCTTAGCGTTGG+AGG | 0.478506 | 4.2:+1268600 | MS.gene62676:CDS |
| GCTCTTAACAGCTTAGGAAA+AGG | 0.479625 | 4.2:+1265659 | MS.gene62676:CDS |
| TGGGTTTGATGAGGGTTCAT+GGG | 0.483693 | 4.2:+1266218 | MS.gene62676:CDS |
| AGAGGTAGATCATTGTGAAC+AGG | 0.483745 | 4.2:-1269872 | None:intergenic |
| ATAGTAGATATGTTTGTACT+TGG | 0.484397 | 4.2:-1269899 | None:intergenic |
| TCTTAAAGGTGCTCCTGGCA+GGG | 0.485486 | 4.2:+1269433 | MS.gene62676:CDS |
| TGGAGGGAAAGATTTATTGT+TGG | 0.488064 | 4.2:+1268617 | MS.gene62676:CDS |
| AAGTGATTCTTGAGCTCTGA+TGG | 0.490013 | 4.2:-1268669 | None:intergenic |
| ACCTTTAAGAAGAGAGGTGA+TGG | 0.490856 | 4.2:-1269420 | None:intergenic |
| AACCATAATATGTGTAAAGA+GGG | 0.493169 | 4.2:+1269313 | MS.gene62676:CDS |
| AACAAACGCATACCTGTGAT+TGG | 0.494939 | 4.2:-1270099 | None:intergenic |
| TGGGAGAGGAATCCCCTGCC+AGG | 0.495127 | 4.2:-1269446 | None:intergenic |
| ATGCAACCAGTTTCGTGGAC+AGG | 0.495715 | 4.2:+1275581 | MS.gene62676:CDS |
| AAGTGAGCAGCCACAGTGAA+TGG | 0.496362 | 4.2:+1269348 | MS.gene62676:CDS |
| TTTCCATGCAACCAGTTTCG+TGG | 0.506265 | 4.2:+1275576 | MS.gene62676:CDS |
| AATAGGTAACAGTTGGCAAA+AGG | 0.508024 | 4.2:+1270076 | MS.gene62676:intron |
| GTTTCTTTGAAGCAATAAAT+GGG | 0.508479 | 4.2:+1270452 | MS.gene62676:CDS |
| AATGTGGCATTTATTGTCAC+AGG | 0.509386 | 4.2:+1270538 | MS.gene62676:CDS |
| CAAGACGTGTCTTCCACCTT+GGG | 0.511239 | 4.2:+1268645 | MS.gene62676:CDS |
| GTTCACAATGATCTACCTCT+TGG | 0.514768 | 4.2:+1269875 | MS.gene62676:CDS |
| TAACCATAATATGTGTAAAG+AGG | 0.516257 | 4.2:+1269312 | MS.gene62676:CDS |
| AAAGGTTGATAGCATGGGAG+AGG | 0.517621 | 4.2:-1269460 | None:intergenic |
| TGAGGGTACCTTGCAAGTGC+AGG | 0.522200 | 4.2:-1266375 | None:intergenic |
| AAGTTCTTAGTAAACAAAGA+AGG | 0.522522 | 4.2:+1276008 | MS.gene62676:CDS |
| TTTATCACATTTAATGTCAA+CGG | 0.522581 | 4.2:-1265804 | None:intergenic |
| TTCACTGTGGCTGCTCACTT+GGG | 0.522829 | 4.2:-1269345 | None:intergenic |
| ACTTTATGTAAATACCGATA+AGG | 0.523405 | 4.2:+1269958 | MS.gene62676:CDS |
| GAAGATAAAGGTTGATAGCA+TGG | 0.525392 | 4.2:-1269466 | None:intergenic |
| TACCAGAAGTATAAGGATCA+AGG | 0.527051 | 4.2:+1275432 | MS.gene62676:CDS |
| CTTGAGCTCTGATGGTCCCA+AGG | 0.533591 | 4.2:-1268661 | None:intergenic |
| ATTAAATTGAGAGTGAGAAA+AGG | 0.536310 | 4.2:-1269926 | None:intergenic |
| TACAGTATTTGGGTTTGATG+AGG | 0.536814 | 4.2:+1266209 | MS.gene62676:CDS |
| TAATATGTGTAAAGAGGGGA+GGG | 0.538133 | 4.2:+1269318 | MS.gene62676:CDS |
| ACTTGTTTAGAAAGAAGAAG+TGG | 0.538346 | 4.2:-1266321 | None:intergenic |
| CAGTTTCGTGGACAGGAACC+AGG | 0.539854 | 4.2:+1275588 | MS.gene62676:CDS |
| GCAAGACGTGTCTTCCACCT+TGG | 0.540220 | 4.2:+1268644 | MS.gene62676:CDS |
| TTCAGAATGTTGTTTGCACA+AGG | 0.545993 | 4.2:+1275625 | MS.gene62676:CDS |
| CACTCATAATAGGTAACAGT+TGG | 0.547417 | 4.2:+1270069 | MS.gene62676:intron |
| TTGGAGAACAGTTATTTAGT+GGG | 0.548703 | 4.2:+1268700 | MS.gene62676:CDS |
| ACAGTATTTGGGTTTGATGA+GGG | 0.549123 | 4.2:+1266210 | MS.gene62676:CDS |
| CTTAGTAAACAAAGAAGGGA+AGG | 0.552208 | 4.2:+1276013 | MS.gene62676:CDS |
| ATACAGAGGAAAGGTTCTGC+TGG | 0.554671 | 4.2:+1274190 | MS.gene62676:CDS |
| TTGTGGGTCTTAGCGTTGGA+GGG | 0.560685 | 4.2:+1268601 | MS.gene62676:CDS |
| AGCTTACTTGGGTGAAGGTG+AGG | 0.562983 | 4.2:-1265856 | None:intergenic |
| TATGACAAATCTGACATTGG+TGG | 0.565630 | 4.2:-1269815 | None:intergenic |
| TGTCCACGAAACTGGTTGCA+TGG | 0.566923 | 4.2:-1275579 | None:intergenic |
| GCAGGAGGATCCCATGAAGA+AGG | 0.570234 | 4.2:-1266357 | None:intergenic |
| GAAATTAAGTTACCATTGTG+AGG | 0.576973 | 4.2:-1274225 | None:intergenic |
| AGTTCTTAGTAAACAAAGAA+GGG | 0.577714 | 4.2:+1276009 | MS.gene62676:CDS |
| TTGGGTGAAGGTGAGGATGT+CGG | 0.578922 | 4.2:-1265849 | None:intergenic |
| AAACAAAGAAGGGAAGGTTG+TGG | 0.578941 | 4.2:+1276019 | MS.gene62676:CDS |
| AATAGGAAGAGTTCAATACC+TGG | 0.578976 | 4.2:+1266162 | MS.gene62676:CDS |
| CACTGGTGCTGTACATACAT+GGG | 0.579155 | 4.2:-1270485 | None:intergenic |
| AAGATAAAGGTTGATAGCAT+GGG | 0.580624 | 4.2:-1269465 | None:intergenic |
| CTTTGGGACTCACATCCTTG+TGG | 0.581257 | 4.2:+1268584 | MS.gene62676:CDS |
| GGGATCCTCCTGCACTTGCA+AGG | 0.582684 | 4.2:+1266367 | MS.gene62676:CDS |
| ATCAGAGCTCAAGAATCACT+TGG | 0.583882 | 4.2:+1268671 | MS.gene62676:CDS |
| CCAAAGACATCAAAGGCGGC+TGG | 0.585919 | 4.2:-1269097 | None:intergenic |
| TTCAGGCTCAAATTCTGCAA+AGG | 0.587756 | 4.2:+1265701 | MS.gene62676:CDS |
| AAAGGAGGAATATTTGGAGA+TGG | 0.590133 | 4.2:+1275966 | MS.gene62676:CDS |
| AGAACAATAACCTCAGATGT+AGG | 0.590181 | 4.2:-1270600 | None:intergenic |
| GTTGGCAAAAGGCCAATCAC+AGG | 0.591185 | 4.2:+1270087 | MS.gene62676:CDS |
| AGGAGCACCTTTAAGAAGAG+AGG | 0.595422 | 4.2:-1269426 | None:intergenic |
| ATAATATGTGTAAAGAGGGG+AGG | 0.601048 | 4.2:+1269317 | MS.gene62676:CDS |
| GAATCAGCTTACTTGGGTGA+AGG | 0.603291 | 4.2:-1265861 | None:intergenic |
| TAATCACCTTATCAAAGACT+GGG | 0.624432 | 4.2:-1275662 | None:intergenic |
| TCATACTTTCTTGACTACCA+AGG | 0.625611 | 4.2:+1269833 | MS.gene62676:CDS |
| TTGCGGACCAAAGACATCAA+AGG | 0.629078 | 4.2:-1269104 | None:intergenic |
| GGGTACCTTGCAAGTGCAGG+AGG | 0.630167 | 4.2:-1266372 | None:intergenic |
| TCTGAGTCAATACAGAGGAA+AGG | 0.631545 | 4.2:+1274181 | MS.gene62676:CDS |
| ATAGGAAGAGTTCAATACCT+GGG | 0.632447 | 4.2:+1266163 | MS.gene62676:CDS |
| TGTCGGATTGATAACGTGTA+CGG | 0.634359 | 4.2:-1265832 | None:intergenic |
| ATGTTTGTACTTGGACCAAG+AGG | 0.635000 | 4.2:-1269890 | None:intergenic |
| CAAAGAGAGTCCTACATCTG+AGG | 0.641177 | 4.2:+1270590 | MS.gene62676:CDS |
| CTATAATTGCAGGATATCAG+TGG | 0.642189 | 4.2:+1274146 | MS.gene62676:intron |
| ACTGTATTGAAATACCCACT+TGG | 0.645812 | 4.2:-1266192 | None:intergenic |
| AAGTATGACAAATCTGACAT+TGG | 0.647643 | 4.2:-1269818 | None:intergenic |
| TATTTGGAGATGGTATCAAG+TGG | 0.648183 | 4.2:+1275976 | MS.gene62676:CDS |
| CCTTTAAGAAGAGAGGTGAT+GGG | 0.648998 | 4.2:-1269419 | None:intergenic |
| TACCTGGGAAAATACCAAGT+GGG | 0.650959 | 4.2:+1266178 | MS.gene62676:CDS |
| ACCATAATATGTGTAAAGAG+GGG | 0.658232 | 4.2:+1269314 | MS.gene62676:CDS |
| CACCGCTCCTCTGAAAATCG+AGG | 0.662646 | 4.2:+1276058 | MS.gene62676:CDS |
| CTCCAACGCTAAGACCCACA+AGG | 0.680760 | 4.2:-1268599 | None:intergenic |
| AATATGTGTAAAGAGGGGAG+GGG | 0.680772 | 4.2:+1269319 | MS.gene62676:CDS |
| GAGCTCTGATGGTCCCAAGG+TGG | 0.684288 | 4.2:-1268658 | None:intergenic |
| CGGACCAAAGACATCAAAGG+CGG | 0.704708 | 4.2:-1269101 | None:intergenic |
| AAATAAAGATCAGAAACACA+AGG | 0.714298 | 4.2:+1268743 | MS.gene62676:CDS |
| TTGTCAATGTTGCCTCACAA+TGG | 0.714648 | 4.2:+1274213 | MS.gene62676:CDS |
| ATACCTGGGAAAATACCAAG+TGG | 0.723262 | 4.2:+1266177 | MS.gene62676:CDS |
| ACACAGGTTAGCCATACACG+TGG | 0.725610 | 4.2:+1270348 | MS.gene62676:intron |
| CTGTGAGCAGCCATTCACTG+TGG | 0.728210 | 4.2:-1269358 | None:intergenic |
| GTGAGTCTGAGTCAATACAG+AGG | 0.737687 | 4.2:+1274176 | MS.gene62676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 1265635 | 1276079 | 1265635 | ID=MS.gene62676 |
| chr4.2 | mRNA | 1265635 | 1276079 | 1265635 | ID=MS.gene62676.t1;Parent=MS.gene62676 |
| chr4.2 | exon | 1265635 | 1265871 | 1265635 | ID=MS.gene62676.t1.exon1;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1265635 | 1265871 | 1265635 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1266147 | 1266388 | 1266147 | ID=MS.gene62676.t1.exon2;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1266147 | 1266388 | 1266147 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1268572 | 1268764 | 1268572 | ID=MS.gene62676.t1.exon3;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1268572 | 1268764 | 1268572 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1269094 | 1269168 | 1269094 | ID=MS.gene62676.t1.exon4;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1269094 | 1269168 | 1269094 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1269308 | 1269491 | 1269308 | ID=MS.gene62676.t1.exon5;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1269308 | 1269491 | 1269308 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1269810 | 1269979 | 1269810 | ID=MS.gene62676.t1.exon6;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1269810 | 1269979 | 1269810 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1270081 | 1270145 | 1270081 | ID=MS.gene62676.t1.exon7;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1270081 | 1270145 | 1270081 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1270354 | 1270627 | 1270354 | ID=MS.gene62676.t1.exon8;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1270354 | 1270627 | 1270354 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1274158 | 1274234 | 1274158 | ID=MS.gene62676.t1.exon9;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1274158 | 1274234 | 1274158 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1275392 | 1275453 | 1275392 | ID=MS.gene62676.t1.exon10;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1275392 | 1275453 | 1275392 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1275559 | 1275677 | 1275559 | ID=MS.gene62676.t1.exon11;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1275559 | 1275677 | 1275559 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| chr4.2 | exon | 1275912 | 1276079 | 1275912 | ID=MS.gene62676.t1.exon12;Parent=MS.gene62676.t1 |
| chr4.2 | CDS | 1275912 | 1276079 | 1275912 | ID=cds.MS.gene62676.t1;Parent=MS.gene62676.t1 |
| Gene Sequence |
| Protein sequence |
