AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052034

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052034.t1 MTR_2g098470 92.516 628 34 2 1 624 1 619 0.0 1164
MS.gene052034.t1 MTR_5g087790 63.312 308 102 4 24 329 35 333 2.11e-132 402
MS.gene052034.t1 MTR_3g078770 63.946 294 92 4 39 330 53 334 3.37e-125 383
MS.gene052034.t1 MTR_3g087530 58.238 261 94 5 35 288 29 281 1.48e-98 308
MS.gene052034.t1 MTR_6g460640 53.731 268 111 4 27 290 32 290 1.19e-94 305
MS.gene052034.t1 MTR_8g091370 56.716 268 94 6 32 288 16 272 5.97e-94 296
MS.gene052034.t1 MTR_6g060600 53.358 268 112 4 27 290 32 290 5.66e-93 300
MS.gene052034.t1 MTR_3g010790 55.882 204 78 3 94 290 1 199 2.57e-75 249
MS.gene052034.t1 MTR_2g098450 64.706 153 45 3 476 624 65 212 1.32e-61 204
MS.gene052034.t1 MTR_2g098450 77.419 62 14 0 16 77 3 64 3.65e-22 95.5
MS.gene052034.t1 MTR_1g024420 41.121 107 63 0 30 136 2 108 1.50e-24 99.4
MS.gene052034.t1 MTR_7g095580 55.385 65 29 0 83 147 1 65 5.79e-19 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052034.t1 AT1G73730 51.360 625 245 14 1 624 1 567 0.0 529
MS.gene052034.t1 AT1G73730 51.809 608 234 14 18 624 6 555 1.85e-180 523
MS.gene052034.t1 AT3G20770 63.072 306 102 4 24 327 35 331 8.85e-129 393
MS.gene052034.t1 AT2G27050 67.778 270 81 4 25 290 36 303 3.81e-128 390
MS.gene052034.t1 AT5G10120 55.849 265 110 3 29 288 14 276 4.24e-96 303
MS.gene052034.t1 AT5G65100 52.190 274 112 4 33 288 33 305 9.62e-90 289
MS.gene052034.t1 AT5G21120 52.797 286 124 5 31 306 41 325 1.33e-89 287
MS.gene052034.t1 AT5G21120 52.797 286 124 5 31 306 41 325 1.33e-89 287
MS.gene052034.t1 AT5G21120 52.797 286 124 5 31 306 48 332 1.68e-89 287

Find 171 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTCTCTGGTTGCCTAAT+TGG 0.150692 2.2:-4192663 None:intergenic
GGATCACCATTATTAGATTT+TGG 0.201596 2.2:+4192789 MS.gene052034:CDS
ATGGGTGAACTCGTTGAAAT+TGG 0.238500 2.2:+4190116 MS.gene052034:CDS
ATATTCGGCAGTTTACTTCT+AGG 0.240085 2.2:-4192216 None:intergenic
AAGTCATGTGGTTTCTTATA+AGG 0.251269 2.2:-4191700 None:intergenic
GCAGGTCTTGGAGCGTGCTC+TGG 0.271067 2.2:-4191519 None:intergenic
GTTGAAATTGGAGCTGATAT+TGG 0.286718 2.2:+4190128 MS.gene052034:CDS
AGACAGGAGCAATCAGTTTA+TGG 0.290050 2.2:+4192044 MS.gene052034:CDS
GGCCCCTCACGTCTTATTTC+CGG 0.293263 2.2:-4192324 None:intergenic
TCAGCTTCATGAGGCATAAC+AGG 0.297998 2.2:-4192549 None:intergenic
AGAGATTGAGGCAGAAGATT+TGG 0.298365 2.2:+4191126 MS.gene052034:CDS
CGGCAAAGGAAAGTTCAATT+TGG 0.299516 2.2:+4191836 MS.gene052034:CDS
AACCCATGATATCATCAAAA+AGG 0.311917 2.2:-4192842 None:intergenic
CCAAACCTATCCAGCTCGTT+TGG 0.316285 2.2:-4192768 None:intergenic
TGTTGGTTCTGTTTCTTCTA+AGG 0.322080 2.2:+4192020 MS.gene052034:CDS
CCTGTTCATTCCCATGAATC+TGG 0.335499 2.2:-4192272 None:intergenic
ACCCGAGCGTTGCATCTTGC+AGG 0.344551 2.2:-4191537 None:intergenic
TCGTCTCTCTCATTCATATT+CGG 0.345135 2.2:-4192231 None:intergenic
GAACGTGGTCGTTTCTTCCT+AGG 0.356496 2.2:-4192132 None:intergenic
TTTGATGATATCATGGGTTT+GGG 0.358361 2.2:+4192846 MS.gene052034:CDS
TCTTAGCTCGATCGGAATCT+TGG 0.364311 2.2:-4192104 None:intergenic
CCTAATTGGTTCACTGTTTG+CGG 0.370878 2.2:-4192649 None:intergenic
TCACTGTTTGCGGCGGGACC+AGG 0.374584 2.2:-4192639 None:intergenic
TTGAAATTGGAGCTGATATT+GGG 0.378190 2.2:+4190129 MS.gene052034:CDS
AAAACTCCAAAATCTAATAA+TGG 0.379865 2.2:-4192795 None:intergenic
CCGGGTGCTGTTACATGAAC+TGG 0.385720 2.2:-4192426 None:intergenic
GCGTTGCATCTTGCAGGTCT+TGG 0.388206 2.2:-4191531 None:intergenic
TTGATGTTGCCCATCCTGAC+TGG 0.393798 2.2:-4192607 None:intergenic
GAGGAAATATCCATTGGAAA+AGG 0.394290 2.2:+4191600 MS.gene052034:CDS
TTATCAGAGGAACCACTAAC+TGG 0.402423 2.2:-4191376 None:intergenic
CTCCGCCTTGGTGGCCCACC+GGG 0.404229 2.2:+4191629 MS.gene052034:CDS
TGCTCTGGGAGTTCCCATTT+CGG 0.409722 2.2:-4191504 None:intergenic
AAGAAAAGGTGAAGTTTGAT+AGG 0.411593 2.2:+4191416 MS.gene052034:CDS
GAGGGGCCAAGTCATCTATC+TGG 0.415007 2.2:+4192339 MS.gene052034:CDS
CCTCCGCCTTGGTGGCCCAC+CGG 0.415149 2.2:+4191628 MS.gene052034:CDS
ATAGTTATTGCAGCATTCTC+TGG 0.415425 2.2:-4192675 None:intergenic
AAGGAAAGTTCAATTTGGTT+GGG 0.416475 2.2:+4191841 MS.gene052034:CDS
CCGCAAACAGTGAACCAATT+AGG 0.418476 2.2:+4192649 MS.gene052034:CDS
TATTAGATATCTCAATATTC+CGG 0.419493 2.2:+4191084 MS.gene052034:CDS
CCAAACGAGCTGGATAGGTT+TGG 0.422592 2.2:+4192768 MS.gene052034:CDS
GAGGCCGAAAATAACCGAAA+TGG 0.427774 2.2:+4191490 MS.gene052034:CDS
ATGAATGGTGATGAAATTAT+CGG 0.435300 2.2:+4192711 MS.gene052034:CDS
GAGGTGCCAGTTCATTTATC+AGG 0.441386 2.2:+4192393 MS.gene052034:CDS
TCATACTTGGCTATGGCTGC+AGG 0.444642 2.2:-4191445 None:intergenic
CGACCACCAATCTTCATTCC+CGG 0.445023 2.2:-4191647 None:intergenic
CTGTTTCTTCTAAGGAAGAC+AGG 0.448155 2.2:+4192028 MS.gene052034:CDS
TACAATCCAGTCACAAGATA+TGG 0.449117 2.2:+4192582 MS.gene052034:CDS
GTAGCTGCACTCCAGATTCA+TGG 0.449306 2.2:+4192261 MS.gene052034:CDS
CAGGTCTTGGAGCGTGCTCT+GGG 0.450202 2.2:-4191518 None:intergenic
CAAACCTATCCAGCTCGTTT+GGG 0.454172 2.2:-4192767 None:intergenic
GAGGTGCCAGTTCATTTATC+AGG 0.455057 2.2:+4192366 MS.gene052034:CDS
AAAGGAAAGTTCAATTTGGT+TGG 0.458921 2.2:+4191840 MS.gene052034:CDS
AAGATTTGGAGAGGCGGATG+TGG 0.460361 2.2:+4191140 MS.gene052034:CDS
CACATCTTCTTCAAGTCATG+TGG 0.464103 2.2:-4191712 None:intergenic
GGCCCACCGGGAATGAAGAT+TGG 0.471569 2.2:+4191641 MS.gene052034:CDS
TCGCGAGTTATCTGATGGTT+CGG 0.474239 2.2:-4192070 None:intergenic
AGTAGCGATAACGGTACGTC+TGG 0.478350 2.2:+4191901 MS.gene052034:CDS
AAGACACTCTGCTTCATACT+TGG 0.479673 2.2:-4191458 None:intergenic
AGGCCGAAAATAACCGAAAT+GGG 0.482158 2.2:+4191491 MS.gene052034:CDS
TCACCATTCATATTTGCTGC+AGG 0.483300 2.2:-4192699 None:intergenic
CCGTGTCCTGATAAATGAAC+TGG 0.486748 2.2:-4192399 None:intergenic
CCAGATTCATGGGAATGAAC+AGG 0.489559 2.2:+4192272 MS.gene052034:CDS
AGGGTGTTCCTCCGCCTTGG+TGG 0.489757 2.2:+4191620 MS.gene052034:CDS
CCAGTTCATGTAACAGCACC+CGG 0.490378 2.2:+4192426 MS.gene052034:CDS
AAAAGGGTGTTCCTCCGCCT+TGG 0.490659 2.2:+4191617 MS.gene052034:CDS
AGGAAATATCCATTGGAAAA+GGG 0.497233 2.2:+4191601 MS.gene052034:CDS
CACAAGATATGGTCCCAGTC+AGG 0.497696 2.2:+4192593 MS.gene052034:CDS
CATTCCCAAACGAGCTGGAT+AGG 0.500944 2.2:+4192763 MS.gene052034:CDS
TAAGTACATGCTGAAGCTCA+TGG 0.501457 2.2:+4191300 MS.gene052034:CDS
TCATCACTGACATCTTTCTC+CGG 0.504020 2.2:-4191103 None:intergenic
AAGAACACCAGTTGGCATAT+CGG 0.504528 2.2:-4191929 None:intergenic
ATTTCATTGTCAGATTGTGC+TGG 0.504859 2.2:-4192180 None:intergenic
TCATGTCCTGATAAATGAAC+TGG 0.504862 2.2:-4192372 None:intergenic
GGAATTACCGATATGCCAAC+TGG 0.505544 2.2:+4191922 MS.gene052034:CDS
ACCTGCAAGATGCAACGCTC+GGG 0.506370 2.2:+4191536 MS.gene052034:CDS
AGGAAAGTTCAATTTGGTTG+GGG 0.508259 2.2:+4191842 MS.gene052034:CDS
GATGAAATGATGCAGTACTT+TGG 0.511735 2.2:+4192873 MS.gene052034:CDS
CCAGTTCATTTATCAGGACA+CGG 0.512600 2.2:+4192399 MS.gene052034:CDS
TAGAGCTTGGTGGAAAGAAA+AGG 0.512695 2.2:+4191402 MS.gene052034:CDS
GTCGAGAAGAAGCTCTCATT+AGG 0.512866 2.2:+4191872 MS.gene052034:CDS
CTGATAACATTAGAGCTTGG+TGG 0.517273 2.2:+4191392 MS.gene052034:CDS
TGTCAGTGATGAAGAGATTG+AGG 0.518821 2.2:+4191114 MS.gene052034:CDS
GGAAGAAACGACCACGTTCG+AGG 0.522146 2.2:+4192136 MS.gene052034:CDS
TCCTCAGAGGAAATATCCAT+TGG 0.525115 2.2:+4191594 MS.gene052034:CDS
CTGGGACCATATCTTGTGAC+TGG 0.525198 2.2:-4192588 None:intergenic
GCTAGCAACTATGATGTTGA+TGG 0.525679 2.2:+4191985 MS.gene052034:CDS
CTCTGCTTCATACTTGGCTA+TGG 0.528334 2.2:-4191452 None:intergenic
ATTGGTTCACTGTTTGCGGC+GGG 0.530607 2.2:-4192645 None:intergenic
AAATGTCGAGGGCACAAGAT+GGG 0.530650 2.2:+4191272 MS.gene052034:CDS
GAGAAGGGAAAACCAGTTAG+TGG 0.532079 2.2:+4191364 MS.gene052034:CDS
TTCCTTCGCGAGTTATCTGA+TGG 0.548644 2.2:-4192075 None:intergenic
AGGCAGCCTAGTAGCGATAA+CGG 0.550005 2.2:+4191892 MS.gene052034:CDS
CAACATCAACATCTGCAGCC+TGG 0.553510 2.2:+4192621 MS.gene052034:CDS
CCGGTGGGCCACCAAGGCGG+AGG 0.554118 2.2:-4191628 None:intergenic
AGATATGGTCCCAGTCAGGA+TGG 0.555307 2.2:+4192597 MS.gene052034:CDS
AAAAGGAATGATGGTGATGG+TGG 0.555478 2.2:-4192825 None:intergenic
TTTGGAGAGGCGGATGTGGA+AGG 0.556184 2.2:+4191144 MS.gene052034:CDS
AGACACATTCCCAAACGAGC+TGG 0.557596 2.2:+4192758 MS.gene052034:CDS
TAGCTGCACTCCAGATTCAT+GGG 0.558033 2.2:+4192262 MS.gene052034:CDS
TTGCTAGCACTACTAGCAGC+AGG 0.559279 2.2:-4191970 None:intergenic
CCACCGGGAATGAAGATTGG+TGG 0.559941 2.2:+4191644 MS.gene052034:CDS
CTTGAAGAAGATGTGGAAAG+TGG 0.561365 2.2:+4191720 MS.gene052034:CDS
CCTCTGATAACATTAGAGCT+TGG 0.561811 2.2:+4191389 MS.gene052034:CDS
CAGCTTCATGAGGCATAACA+GGG 0.562451 2.2:-4192548 None:intergenic
TGCAAACAGTATGATTTCCT+CGG 0.564591 2.2:+4192473 MS.gene052034:CDS
GACCTGCAAGATGCAACGCT+CGG 0.564854 2.2:+4191535 MS.gene052034:CDS
TGATGTTGCCCATCCTGACT+GGG 0.565505 2.2:-4192606 None:intergenic
AGGATCGTATCAAACTCAAA+AGG 0.568104 2.2:+4191164 MS.gene052034:CDS
GTATGGAATCATTCCTGAGA+AGG 0.572173 2.2:+4191348 MS.gene052034:CDS
AAAGCTCGTGGATTTGTGTA+TGG 0.575890 2.2:+4191331 MS.gene052034:CDS
CAGTTCATTTATCAGGACAC+GGG 0.576276 2.2:+4192400 MS.gene052034:CDS
CACATGACTTGAAGAAGATG+TGG 0.577025 2.2:+4191713 MS.gene052034:CDS
AGGTTGCTTCTTAGCTCGAT+CGG 0.579443 2.2:-4192112 None:intergenic
TATGGAATCATTCCTGAGAA+GGG 0.580239 2.2:+4191349 MS.gene052034:CDS
TCCAATGGATATTTCCTCTG+AGG 0.580696 2.2:-4191595 None:intergenic
AATGGATATTTCCTCTGAGG+AGG 0.582773 2.2:-4191592 None:intergenic
GGTGATGAAATTATCGGAGG+AGG 0.587365 2.2:+4192717 MS.gene052034:CDS
TCGCTTCCAGATAGATGACT+TGG 0.588209 2.2:-4192345 None:intergenic
ATGGAAGTGTGCAAAGCTCG+TGG 0.588400 2.2:+4191319 MS.gene052034:CDS
CCACCAATCTTCATTCCCGG+TGG 0.588777 2.2:-4191644 None:intergenic
AATTGGTTCACTGTTTGCGG+CGG 0.589663 2.2:-4192646 None:intergenic
ATGCCTGCAGCAAATATGAA+TGG 0.596398 2.2:+4192696 MS.gene052034:CDS
TCATGTGGTTTCTTATAAGG+AGG 0.596463 2.2:-4191697 None:intergenic
GGAAAGTTCAATTTGGTTGG+GGG 0.600209 2.2:+4191843 MS.gene052034:CDS
GCAAGACAAGATGACGGCAA+AGG 0.603284 2.2:+4191822 MS.gene052034:CDS
TTCCCGGTGGGCCACCAAGG+CGG 0.606722 2.2:-4191631 None:intergenic
ATAAGAGTAATGATCAAACC+CGG 0.606820 2.2:-4192445 None:intergenic
TCATTCCCGGTGGGCCACCA+AGG 0.607148 2.2:-4191634 None:intergenic
AAAGTGTGTTTATGAGTAGA+CGG 0.608340 2.2:+4192496 MS.gene052034:CDS
ACTCATAAACACACTTTCCG+AGG 0.608706 2.2:-4192490 None:intergenic
TTGAAGAAGATGTGGAAAGT+GGG 0.608760 2.2:+4191721 MS.gene052034:CDS
AAGGTGAAGTTTGATAGGAA+TGG 0.608844 2.2:+4191421 MS.gene052034:CDS
AAAATGTCGAGGGCACAAGA+TGG 0.611433 2.2:+4191271 MS.gene052034:CDS
AACTGAGAATAGTGCAGCGG+TGG 0.612241 2.2:-4192519 None:intergenic
CCGCCGGAAATAAGACGTGA+GGG 0.613595 2.2:+4192321 MS.gene052034:CDS
CCCTAGAGAAGCAAAAGCCG+AGG 0.615253 2.2:+4191221 MS.gene052034:CDS
GATGGTACCGACGATGGTGT+TGG 0.615254 2.2:+4192003 MS.gene052034:CDS
CACCAATCTTCATTCCCGGT+GGG 0.616240 2.2:-4191643 None:intergenic
GATATGGTCCCAGTCAGGAT+GGG 0.617269 2.2:+4192598 MS.gene052034:CDS
AGTTCATTTATCAGGACATG+AGG 0.620667 2.2:+4192374 MS.gene052034:CDS
GCCGCCGGAAATAAGACGTG+AGG 0.622362 2.2:+4192320 MS.gene052034:CDS
TATCAAACTCAAAAGGCTCA+AGG 0.625808 2.2:+4191171 MS.gene052034:CDS
CCAAGCTCTAATGTTATCAG+AGG 0.626452 2.2:-4191389 None:intergenic
TCAAGAAGAAGAACACCAGT+TGG 0.627033 2.2:-4191937 None:intergenic
CCCTCACGTCTTATTTCCGG+CGG 0.629760 2.2:-4192321 None:intergenic
AACAGAACCAACACCATCGT+CGG 0.629982 2.2:-4192010 None:intergenic
AGGCAGAAGATTTGGAGAGG+CGG 0.634433 2.2:+4191134 MS.gene052034:CDS
GACGTACCGTTATCGCTACT+AGG 0.635231 2.2:-4191898 None:intergenic
GCTGCACTTGACCTCGAACG+TGG 0.640254 2.2:-4192147 None:intergenic
TTGAGGCAGAAGATTTGGAG+AGG 0.640791 2.2:+4191131 MS.gene052034:CDS
CGCGTAGGAAGAAAATGTCG+AGG 0.644606 2.2:+4191260 MS.gene052034:CDS
CAGTTCATGTAACAGCACCC+GGG 0.645071 2.2:+4192427 MS.gene052034:CDS
AGATTGTGCTGGTAATGTGT+CGG 0.646269 2.2:-4192169 None:intergenic
TCGCACTTGAATCTACCTCA+TGG 0.652796 2.2:+4191667 MS.gene052034:CDS
AGTCATCTGATCAAGCGCGT+AGG 0.654815 2.2:+4191245 MS.gene052034:CDS
AAGTCATCTATCTGGAAGCG+AGG 0.655312 2.2:+4192347 MS.gene052034:CDS
ATCGAGCTAAGAAGCAACCT+AGG 0.657044 2.2:+4192115 MS.gene052034:CDS
TGCAACTGAGAATAGTGCAG+CGG 0.657420 2.2:-4192522 None:intergenic
AACCATCAGATAACTCGCGA+AGG 0.657732 2.2:+4192073 MS.gene052034:CDS
ATGCTTGCAAGACAAGATGA+CGG 0.662559 2.2:+4191816 MS.gene052034:CDS
AGATTATAATCAGCTTCATG+AGG 0.669056 2.2:-4192558 None:intergenic
AACACTGTGATCCTCCTCAG+AGG 0.669904 2.2:+4191581 MS.gene052034:CDS
GCTTGATCAGATGACTGCCT+CGG 0.670144 2.2:-4191238 None:intergenic
TAAGAGTAATGATCAAACCC+GGG 0.678500 2.2:-4192444 None:intergenic
TAAGGAGGACTCTGACCATG+AGG 0.682592 2.2:-4191682 None:intergenic
AATGGTGATGAAATTATCGG+AGG 0.683666 2.2:+4192714 MS.gene052034:CDS
GCGTAGGAAGAAAATGTCGA+GGG 0.687094 2.2:+4191261 MS.gene052034:CDS
CGCCGGAAATAAGACGTGAG+GGG 0.691319 2.2:+4192322 MS.gene052034:CDS
AGAGTGTCTTGCTATGAGCG+AGG 0.692638 2.2:+4191471 MS.gene052034:CDS
AGTTCATTTATCAGGACACG+GGG 0.705461 2.2:+4192401 MS.gene052034:CDS
GATGTTGATGGTACCGACGA+TGG 0.714346 2.2:+4191997 MS.gene052034:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTCCAAAATCTAATAA+TGG - chr2.2:4192798-4192817 None:intergenic 20.0%
!! CACAGAACAATAAAATAAAT+TGG - chr2.2:4190990-4191009 None:intergenic 20.0%
!! TATTAGATATCTCAATATTC+CGG + chr2.2:4191084-4191103 MS.gene052034:CDS 20.0%
!! TTATTAGGGTAGAAAAAATA+AGG + chr2.2:4190561-4190580 MS.gene052034:intron 20.0%
!! TTGTTAAAGTGTAAAAATGT+CGG + chr2.2:4190526-4190545 MS.gene052034:intron 20.0%
!!! ACTTATCAAATAAGTTGAAA+TGG - chr2.2:4190955-4190974 None:intergenic 20.0%
!!! ATGTGTTATGTGAAATTTTT+GGG + chr2.2:4190681-4190700 MS.gene052034:intron 20.0%
!!! CAATTTATTTTATTGTTCTG+TGG + chr2.2:4190988-4191007 MS.gene052034:intron 20.0%
!!! TATTCTGAGAAATTGAATTT+AGG + chr2.2:4190190-4190209 MS.gene052034:intron 20.0%
!!! TGAATTTAGGTTTTTGTTTT+TGG + chr2.2:4190203-4190222 MS.gene052034:intron 20.0%
! ATATCATCAAAAAGGAATGA+TGG - chr2.2:4192837-4192856 None:intergenic 25.0%
! ATTAAAACTTAGTGTGTGTT+TGG + chr2.2:4190584-4190603 MS.gene052034:intron 25.0%
! GGACTTTAATGTTGTTAAAT+TGG + chr2.2:4190703-4190722 MS.gene052034:intron 25.0%
! TGTTAAATTGGAAAAGATGT+CGG + chr2.2:4190715-4190734 MS.gene052034:intron 25.0%
!! ATGAATGGTGATGAAATTAT+CGG + chr2.2:4192711-4192730 MS.gene052034:CDS 25.0%
!! ATGTTTTGTGTGAAATTCTT+GGG + chr2.2:4190493-4190512 MS.gene052034:intron 25.0%
!! CATGTGTTATGTGAAATTTT+TGG + chr2.2:4190680-4190699 MS.gene052034:intron 25.0%
!! TGTGTTATGTGAAATTTTTG+GGG + chr2.2:4190682-4190701 MS.gene052034:intron 25.0%
!!! ATTCCTTTTTGATGATATCA+TGG + chr2.2:4192839-4192858 MS.gene052034:CDS 25.0%
!!! ATTGTGTTTATGTGTTGATT+AGG + chr2.2:4190367-4190386 MS.gene052034:intron 25.0%
!!! GGTTTTTGTAACTTTTTTGT+GGG + chr2.2:4190262-4190281 MS.gene052034:intron 25.0%
!!! TAAAAATGTCGGTTTATTGT+CGG + chr2.2:4190537-4190556 MS.gene052034:intron 25.0%
!!! TGGTTTTTGTAACTTTTTTG+TGG + chr2.2:4190261-4190280 MS.gene052034:intron 25.0%
!!! TTCCTTTTTGATGATATCAT+GGG + chr2.2:4192840-4192859 MS.gene052034:CDS 25.0%
!!! TTCTGTGGATTTTAATTGAA+TGG + chr2.2:4191003-4191022 MS.gene052034:intron 25.0%
AAAGGAAAGTTCAATTTGGT+TGG + chr2.2:4191840-4191859 MS.gene052034:CDS 30.0%
AAAGTGTGTTTATGAGTAGA+CGG + chr2.2:4192496-4192515 MS.gene052034:CDS 30.0%
AACATTAAACTGCAAGCTAT+CGG - chr2.2:4190878-4190897 None:intergenic 30.0%
AACCCATGATATCATCAAAA+AGG - chr2.2:4192845-4192864 None:intergenic 30.0%
AAGAAAAGGTGAAGTTTGAT+AGG + chr2.2:4191416-4191435 MS.gene052034:CDS 30.0%
AAGGAAAGTTCAATTTGGTT+GGG + chr2.2:4191841-4191860 MS.gene052034:CDS 30.0%
AAGTCATGTGGTTTCTTATA+AGG - chr2.2:4191703-4191722 None:intergenic 30.0%
AGATTATAATCAGCTTCATG+AGG - chr2.2:4192561-4192580 None:intergenic 30.0%
AGGAAATATCCATTGGAAAA+GGG + chr2.2:4191601-4191620 MS.gene052034:CDS 30.0%
AGTACATCACATTTAATCAG+AGG - chr2.2:4191034-4191053 None:intergenic 30.0%
ATAAGAGTAATGATCAAACC+CGG - chr2.2:4192448-4192467 None:intergenic 30.0%
CACCTGATATTGCAAAAATA+AGG + chr2.2:4191773-4191792 MS.gene052034:CDS 30.0%
CTGATATTGCAAAAATAAGG+AGG + chr2.2:4191776-4191795 MS.gene052034:CDS 30.0%
GTTGATTAGGTTAACTCTAT+TGG + chr2.2:4190380-4190399 MS.gene052034:intron 30.0%
TGATCAAATCATGACTTAGT+TGG + chr2.2:4190344-4190363 MS.gene052034:intron 30.0%
TTAGTTTCCTCAATGTCATT+CGG - chr2.2:4190653-4190672 None:intergenic 30.0%
TTGAAATTGGAGCTGATATT+GGG + chr2.2:4190129-4190148 MS.gene052034:CDS 30.0%
TTGAGAATTTGCAGAAATCA+CGG + chr2.2:4190776-4190795 MS.gene052034:intron 30.0%
! ATAGCTTGCAGTTTAATGTT+TGG + chr2.2:4190878-4190897 MS.gene052034:intron 30.0%
! CATGTTTTGTGTGAAATTCT+TGG + chr2.2:4190492-4190511 MS.gene052034:intron 30.0%
! GATTTTCCAAAATCACATTG+AGG - chr2.2:4190829-4190848 None:intergenic 30.0%
! GGATCACCATTATTAGATTT+TGG + chr2.2:4192789-4192808 MS.gene052034:CDS 30.0%
! GTTTTGTGATTCTCTGTTAT+TGG + chr2.2:4190241-4190260 MS.gene052034:intron 30.0%
! TGTTCTGTGAATTTTTGATC+AGG + chr2.2:4190318-4190337 MS.gene052034:intron 30.0%
! TGTTTTGTGTGAAATTCTTG+GGG + chr2.2:4190494-4190513 MS.gene052034:intron 30.0%
! TTTGATGATATCATGGGTTT+GGG + chr2.2:4192846-4192865 MS.gene052034:CDS 30.0%
!! AAAAATGTCGGTTTATTGTC+GGG + chr2.2:4190538-4190557 MS.gene052034:intron 30.0%
!! TTTTGATGATATCATGGGTT+TGG + chr2.2:4192845-4192864 MS.gene052034:CDS 30.0%
!!! CTCCTTATTTTTGCAATATC+AGG - chr2.2:4191778-4191797 None:intergenic 30.0%
AAGGTGAAGTTTGATAGGAA+TGG + chr2.2:4191421-4191440 MS.gene052034:CDS 35.0%
AGCTACAATCAGCGTTATTT+CGG - chr2.2:4190626-4190645 None:intergenic 35.0%
AGGAAAGTTCAATTTGGTTG+GGG + chr2.2:4191842-4191861 MS.gene052034:CDS 35.0%
AGGATCGTATCAAACTCAAA+AGG + chr2.2:4191164-4191183 MS.gene052034:CDS 35.0%
AGTTCATTTATCAGGACATG+AGG + chr2.2:4192374-4192393 MS.gene052034:CDS 35.0%
ATAGTTATTGCAGCATTCTC+TGG - chr2.2:4192678-4192697 None:intergenic 35.0%
ATATTCGGCAGTTTACTTCT+AGG - chr2.2:4192219-4192238 None:intergenic 35.0%
ATTTCATTGTCAGATTGTGC+TGG - chr2.2:4192183-4192202 None:intergenic 35.0%
CAAGTTCACTTGTACATCTT+TGG + chr2.2:4190926-4190945 MS.gene052034:intron 35.0%
GAGGAAATATCCATTGGAAA+AGG + chr2.2:4191600-4191619 MS.gene052034:CDS 35.0%
GATGAAATGATGCAGTACTT+TGG + chr2.2:4192873-4192892 MS.gene052034:CDS 35.0%
GGTTTATTGTCGGGTTATTA+GGG + chr2.2:4190547-4190566 MS.gene052034:intron 35.0%
GTGTATGTTTGGTATCAAAG+TGG - chr2.2:4190851-4190870 None:intergenic 35.0%
GTTGAAATTGGAGCTGATAT+TGG + chr2.2:4190128-4190147 MS.gene052034:CDS 35.0%
TAAGAGTAATGATCAAACCC+GGG - chr2.2:4192447-4192466 None:intergenic 35.0%
TACAATCCAGTCACAAGATA+TGG + chr2.2:4192582-4192601 MS.gene052034:CDS 35.0%
TATCAAACTCAAAAGGCTCA+AGG + chr2.2:4191171-4191190 MS.gene052034:CDS 35.0%
TATGGAATCATTCCTGAGAA+GGG + chr2.2:4191349-4191368 MS.gene052034:CDS 35.0%
TCATGTCCTGATAAATGAAC+TGG - chr2.2:4192375-4192394 None:intergenic 35.0%
TCATGTGGTTTCTTATAAGG+AGG - chr2.2:4191700-4191719 None:intergenic 35.0%
TCGTCTCTCTCATTCATATT+CGG - chr2.2:4192234-4192253 None:intergenic 35.0%
TGCAAACAGTATGATTTCCT+CGG + chr2.2:4192473-4192492 MS.gene052034:CDS 35.0%
TTGAAGAAGATGTGGAAAGT+GGG + chr2.2:4191721-4191740 MS.gene052034:CDS 35.0%
! AATGGTGATGAAATTATCGG+AGG + chr2.2:4192714-4192733 MS.gene052034:CDS 35.0%
! ATGAGACAGAATCTGTTTTG+AGG + chr2.2:4192298-4192317 MS.gene052034:CDS 35.0%
! CTATCGGTTAAGTGTATGTT+TGG - chr2.2:4190862-4190881 None:intergenic 35.0%
! TCAAAAAGGAATGATGGTGA+TGG - chr2.2:4192831-4192850 None:intergenic 35.0%
!! GATTTGAAGTACTGTGCAAT+AGG + chr2.2:4190444-4190463 MS.gene052034:intron 35.0%
!! GTTCCCATTTCGGTTATTTT+CGG - chr2.2:4191497-4191516 None:intergenic 35.0%
!! TGTCTTGCAAGCATTTTGAT+TGG - chr2.2:4191810-4191829 None:intergenic 35.0%
!! TGTTGGTTCTGTTTCTTCTA+AGG + chr2.2:4192020-4192039 MS.gene052034:CDS 35.0%
AAAGCTCGTGGATTTGTGTA+TGG + chr2.2:4191331-4191350 MS.gene052034:CDS 40.0%
AAGAACACCAGTTGGCATAT+CGG - chr2.2:4191932-4191951 None:intergenic 40.0%
AAGACACTCTGCTTCATACT+TGG - chr2.2:4191461-4191480 None:intergenic 40.0%
ACTCATAAACACACTTTCCG+AGG - chr2.2:4192493-4192512 None:intergenic 40.0%
AGACAGGAGCAATCAGTTTA+TGG + chr2.2:4192044-4192063 MS.gene052034:CDS 40.0%
AGAGATTGAGGCAGAAGATT+TGG + chr2.2:4191126-4191145 MS.gene052034:CDS 40.0%
AGGCCGAAAATAACCGAAAT+GGG + chr2.2:4191491-4191510 MS.gene052034:CDS 40.0%
AGTTCATTTATCAGGACACG+GGG + chr2.2:4192401-4192420 MS.gene052034:CDS 40.0%
ATGCCTGCAGCAAATATGAA+TGG + chr2.2:4192696-4192715 MS.gene052034:CDS 40.0%
ATGCTTGCAAGACAAGATGA+CGG + chr2.2:4191816-4191835 MS.gene052034:CDS 40.0%
ATGGGTGAACTCGTTGAAAT+TGG + chr2.2:4190116-4190135 MS.gene052034:CDS 40.0%
CACATCTTCTTCAAGTCATG+TGG - chr2.2:4191715-4191734 None:intergenic 40.0%
CACATGACTTGAAGAAGATG+TGG + chr2.2:4191713-4191732 MS.gene052034:CDS 40.0%
CAGTTCATTTATCAGGACAC+GGG + chr2.2:4192400-4192419 MS.gene052034:CDS 40.0%
CCAGTTCATTTATCAGGACA+CGG + chr2.2:4192372-4192391 MS.gene052034:CDS 40.0%
CCTCTGATAACATTAGAGCT+TGG + chr2.2:4191389-4191408 MS.gene052034:CDS 40.0%
CGGCAAAGGAAAGTTCAATT+TGG + chr2.2:4191836-4191855 MS.gene052034:CDS 40.0%
CGGTTTATTGTCGGGTTATT+AGG + chr2.2:4190546-4190565 MS.gene052034:intron 40.0%
CTGATAACATTAGAGCTTGG+TGG + chr2.2:4191392-4191411 MS.gene052034:CDS 40.0%
CTTGAAGAAGATGTGGAAAG+TGG + chr2.2:4191720-4191739 MS.gene052034:CDS 40.0%
GCTAGCAACTATGATGTTGA+TGG + chr2.2:4191985-4192004 MS.gene052034:CDS 40.0%
GGAAAGTTCAATTTGGTTGG+GGG + chr2.2:4191843-4191862 MS.gene052034:CDS 40.0%
GTATGGAATCATTCCTGAGA+AGG + chr2.2:4191348-4191367 MS.gene052034:CDS 40.0%
TAAGTACATGCTGAAGCTCA+TGG + chr2.2:4191300-4191319 MS.gene052034:CDS 40.0%
TCAAGAAGAAGAACACCAGT+TGG - chr2.2:4191940-4191959 None:intergenic 40.0%
TCATCACTGACATCTTTCTC+CGG - chr2.2:4191106-4191125 None:intergenic 40.0%
TCCAATGGATATTTCCTCTG+AGG - chr2.2:4191598-4191617 None:intergenic 40.0%
TCCTCAGAGGAAATATCCAT+TGG + chr2.2:4191594-4191613 MS.gene052034:CDS 40.0%
TGTCAGTGATGAAGAGATTG+AGG + chr2.2:4191114-4191133 MS.gene052034:CDS 40.0%
TTATCAGAGGAACCACTAAC+TGG - chr2.2:4191379-4191398 None:intergenic 40.0%
! AATGGATATTTCCTCTGAGG+AGG - chr2.2:4191595-4191614 None:intergenic 40.0%
! AGATTGTGCTGGTAATGTGT+CGG - chr2.2:4192172-4192191 None:intergenic 40.0%
! CCAAGCTCTAATGTTATCAG+AGG - chr2.2:4191392-4191411 None:intergenic 40.0%
! CCTAATTGGTTCACTGTTTG+CGG - chr2.2:4192652-4192671 None:intergenic 40.0%
! CTGTTTCTTCTAAGGAAGAC+AGG + chr2.2:4192028-4192047 MS.gene052034:CDS 40.0%
! TAGAGCTTGGTGGAAAGAAA+AGG + chr2.2:4191402-4191421 MS.gene052034:CDS 40.0%
! TCACCATTCATATTTGCTGC+AGG - chr2.2:4192702-4192721 None:intergenic 40.0%
!! AAAAGGAATGATGGTGATGG+TGG - chr2.2:4192828-4192847 None:intergenic 40.0%
!! TTAGTGTGTGTTTGGTGTTG+TGG + chr2.2:4190592-4190611 MS.gene052034:intron 40.0%
!!! CTTGCAAGCATTTTGATTGG+CGG - chr2.2:4191807-4191826 None:intergenic 40.0%
AACAGAACCAACACCATCGT+CGG - chr2.2:4192013-4192032 None:intergenic 45.0%
AACCATCAGATAACTCGCGA+AGG + chr2.2:4192073-4192092 MS.gene052034:CDS 45.0%
AAGTCATCTATCTGGAAGCG+AGG + chr2.2:4192347-4192366 MS.gene052034:CDS 45.0%
ACTGTGCAATAGGTGTACTG+AGG + chr2.2:4190454-4190473 MS.gene052034:intron 45.0%
AGGTTGCTTCTTAGCTCGAT+CGG - chr2.2:4192115-4192134 None:intergenic 45.0%
ATCGAGCTAAGAAGCAACCT+AGG + chr2.2:4192115-4192134 MS.gene052034:CDS 45.0%
CAAAATCACATTGAGGCACG+TGG - chr2.2:4190822-4190841 None:intergenic 45.0%
CAAACCTATCCAGCTCGTTT+GGG - chr2.2:4192770-4192789 None:intergenic 45.0%
CAGCTTCATGAGGCATAACA+GGG - chr2.2:4192551-4192570 None:intergenic 45.0%
CCAGATTCATGGGAATGAAC+AGG + chr2.2:4192272-4192291 MS.gene052034:CDS 45.0%
CCGCAAACAGTGAACCAATT+AGG + chr2.2:4192649-4192668 MS.gene052034:CDS 45.0%
CCGTGTCCTGATAAATGAAC+TGG - chr2.2:4192402-4192421 None:intergenic 45.0%
CCTGTTCATTCCCATGAATC+TGG - chr2.2:4192275-4192294 None:intergenic 45.0%
CTCTGCTTCATACTTGGCTA+TGG - chr2.2:4191455-4191474 None:intergenic 45.0%
GAGAAGGGAAAACCAGTTAG+TGG + chr2.2:4191364-4191383 MS.gene052034:CDS 45.0%
GAGGCCGAAAATAACCGAAA+TGG + chr2.2:4191490-4191509 MS.gene052034:CDS 45.0%
GCATTCTCTGGTTGCCTAAT+TGG - chr2.2:4192666-4192685 None:intergenic 45.0%
GCGTAGGAAGAAAATGTCGA+GGG + chr2.2:4191261-4191280 MS.gene052034:CDS 45.0%
GGAATTACCGATATGCCAAC+TGG + chr2.2:4191922-4191941 MS.gene052034:CDS 45.0%
GGTGATGAAATTATCGGAGG+AGG + chr2.2:4192717-4192736 MS.gene052034:CDS 45.0%
GTCGAGAAGAAGCTCTCATT+AGG + chr2.2:4191872-4191891 MS.gene052034:CDS 45.0%
TAGCTGCACTCCAGATTCAT+GGG + chr2.2:4192262-4192281 MS.gene052034:CDS 45.0%
TCAGCTTCATGAGGCATAAC+AGG - chr2.2:4192552-4192571 None:intergenic 45.0%
TCGCACTTGAATCTACCTCA+TGG + chr2.2:4191667-4191686 MS.gene052034:CDS 45.0%
TCGCGAGTTATCTGATGGTT+CGG - chr2.2:4192073-4192092 None:intergenic 45.0%
TCGCTTCCAGATAGATGACT+TGG - chr2.2:4192348-4192367 None:intergenic 45.0%
TCTTAGCTCGATCGGAATCT+TGG - chr2.2:4192107-4192126 None:intergenic 45.0%
TGCAACTGAGAATAGTGCAG+CGG - chr2.2:4192525-4192544 None:intergenic 45.0%
TTCCTTCGCGAGTTATCTGA+TGG - chr2.2:4192078-4192097 None:intergenic 45.0%
TTGAGGCAGAAGATTTGGAG+AGG + chr2.2:4191131-4191150 MS.gene052034:CDS 45.0%
! AAAATGTCGAGGGCACAAGA+TGG + chr2.2:4191271-4191290 MS.gene052034:CDS 45.0%
! AAATGTCGAGGGCACAAGAT+GGG + chr2.2:4191272-4191291 MS.gene052034:CDS 45.0%
! AATTGGTTCACTGTTTGCGG+CGG - chr2.2:4192649-4192668 None:intergenic 45.0%
! CACGTGCCTCAATGTGATTT+TGG + chr2.2:4190820-4190839 MS.gene052034:intron 45.0%
! GAGGTGCCAGTTCATTTATC+AGG + chr2.2:4192366-4192385 MS.gene052034:CDS 45.0%
! GCTTTTGCCGAATGACATTG+AGG + chr2.2:4190643-4190662 MS.gene052034:intron 45.0%
!!! CTAACTGGTTTTCCCTTCTC+AGG - chr2.2:4191364-4191383 None:intergenic 45.0%
AACACTGTGATCCTCCTCAG+AGG + chr2.2:4191581-4191600 MS.gene052034:CDS 50.0%
AACTGAGAATAGTGCAGCGG+TGG - chr2.2:4192522-4192541 None:intergenic 50.0%
AAGATTTGGAGAGGCGGATG+TGG + chr2.2:4191140-4191159 MS.gene052034:CDS 50.0%
AGACACATTCCCAAACGAGC+TGG + chr2.2:4192758-4192777 MS.gene052034:CDS 50.0%
AGATATGGTCCCAGTCAGGA+TGG + chr2.2:4192597-4192616 MS.gene052034:CDS 50.0%
AGGCAGAAGATTTGGAGAGG+CGG + chr2.2:4191134-4191153 MS.gene052034:CDS 50.0%
AGGCAGCCTAGTAGCGATAA+CGG + chr2.2:4191892-4191911 MS.gene052034:CDS 50.0%
AGTCATCTGATCAAGCGCGT+AGG + chr2.2:4191245-4191264 MS.gene052034:CDS 50.0%
CAACATCAACATCTGCAGCC+TGG + chr2.2:4192621-4192640 MS.gene052034:CDS 50.0%
CACAAGATATGGTCCCAGTC+AGG + chr2.2:4192593-4192612 MS.gene052034:CDS 50.0%
CACCAATCTTCATTCCCGGT+GGG - chr2.2:4191646-4191665 None:intergenic 50.0%
CAGTTCATGTAACAGCACCC+GGG + chr2.2:4192427-4192446 MS.gene052034:CDS 50.0%
CATTCCCAAACGAGCTGGAT+AGG + chr2.2:4192763-4192782 MS.gene052034:CDS 50.0%
CCAAACCTATCCAGCTCGTT+TGG - chr2.2:4192771-4192790 None:intergenic 50.0%
CCAAACGAGCTGGATAGGTT+TGG + chr2.2:4192768-4192787 MS.gene052034:CDS 50.0%
CCAGTTCATGTAACAGCACC+CGG + chr2.2:4192426-4192445 MS.gene052034:CDS 50.0%
CGACCACCAATCTTCATTCC+CGG - chr2.2:4191650-4191669 None:intergenic 50.0%
CGCGTAGGAAGAAAATGTCG+AGG + chr2.2:4191260-4191279 MS.gene052034:CDS 50.0%
CTGGGACCATATCTTGTGAC+TGG - chr2.2:4192591-4192610 None:intergenic 50.0%
GAACGTGGTCGTTTCTTCCT+AGG - chr2.2:4192135-4192154 None:intergenic 50.0%
GACGTACCGTTATCGCTACT+AGG - chr2.2:4191901-4191920 None:intergenic 50.0%
GATATGGTCCCAGTCAGGAT+GGG + chr2.2:4192598-4192617 MS.gene052034:CDS 50.0%
GCTTGATCAGATGACTGCCT+CGG - chr2.2:4191241-4191260 None:intergenic 50.0%
GTAGCTGCACTCCAGATTCA+TGG + chr2.2:4192261-4192280 MS.gene052034:CDS 50.0%
TAAGGAGGACTCTGACCATG+AGG - chr2.2:4191685-4191704 None:intergenic 50.0%
TCATACTTGGCTATGGCTGC+AGG - chr2.2:4191448-4191467 None:intergenic 50.0%
TGATGTTGCCCATCCTGACT+GGG - chr2.2:4192609-4192628 None:intergenic 50.0%
TTGATGTTGCCCATCCTGAC+TGG - chr2.2:4192610-4192629 None:intergenic 50.0%
TTGCTAGCACTACTAGCAGC+AGG - chr2.2:4191973-4191992 None:intergenic 50.0%
! AGAGTGTCTTGCTATGAGCG+AGG + chr2.2:4191471-4191490 MS.gene052034:CDS 50.0%
! AGTAGCGATAACGGTACGTC+TGG + chr2.2:4191901-4191920 MS.gene052034:CDS 50.0%
! ATGGAAGTGTGCAAAGCTCG+TGG + chr2.2:4191319-4191338 MS.gene052034:CDS 50.0%
! ATTGGTTCACTGTTTGCGGC+GGG - chr2.2:4192648-4192667 None:intergenic 50.0%
! CCTCGGCTTTTGCTTCTCTA+GGG - chr2.2:4191224-4191243 None:intergenic 50.0%
! GCAAGACAAGATGACGGCAA+AGG + chr2.2:4191822-4191841 MS.gene052034:CDS 50.0%
! GGAGGAACACCCTTTTCCAA+TGG - chr2.2:4191613-4191632 None:intergenic 50.0%
!! GATGTTGATGGTACCGACGA+TGG + chr2.2:4191997-4192016 MS.gene052034:CDS 50.0%
!! GTGTGTGTTTGGTGTTGTGG+AGG + chr2.2:4190595-4190614 MS.gene052034:intron 50.0%
!! TGCTCTGGGAGTTCCCATTT+CGG - chr2.2:4191507-4191526 None:intergenic 50.0%
!!! AGAATCTGTTTTGAGGCCGC+CGG + chr2.2:4192305-4192324 MS.gene052034:CDS 50.0%
ACCTGCAAGATGCAACGCTC+GGG + chr2.2:4191536-4191555 MS.gene052034:CDS 55.0%
CCACCAATCTTCATTCCCGG+TGG - chr2.2:4191647-4191666 None:intergenic 55.0%
CCACCGGGAATGAAGATTGG+TGG + chr2.2:4191644-4191663 MS.gene052034:CDS 55.0%
CCCTAGAGAAGCAAAAGCCG+AGG + chr2.2:4191221-4191240 MS.gene052034:CDS 55.0%
CCGCCGGAAATAAGACGTGA+GGG + chr2.2:4192321-4192340 MS.gene052034:CDS 55.0%
CGCCGGAAATAAGACGTGAG+GGG + chr2.2:4192322-4192341 MS.gene052034:CDS 55.0%
GACCTGCAAGATGCAACGCT+CGG + chr2.2:4191535-4191554 MS.gene052034:CDS 55.0%
GAGGGGCCAAGTCATCTATC+TGG + chr2.2:4192339-4192358 MS.gene052034:CDS 55.0%
GCGTTGCATCTTGCAGGTCT+TGG - chr2.2:4191534-4191553 None:intergenic 55.0%
GGAAGAAACGACCACGTTCG+AGG + chr2.2:4192136-4192155 MS.gene052034:CDS 55.0%
TTTGGAGAGGCGGATGTGGA+AGG + chr2.2:4191144-4191163 MS.gene052034:CDS 55.0%
! GCCTCGGCTTTTGCTTCTCT+AGG - chr2.2:4191225-4191244 None:intergenic 55.0%
!! AAAAGGGTGTTCCTCCGCCT+TGG + chr2.2:4191617-4191636 MS.gene052034:CDS 55.0%
!! CCCTCACGTCTTATTTCCGG+CGG - chr2.2:4192324-4192343 None:intergenic 55.0%
!! CCGGGTGCTGTTACATGAAC+TGG - chr2.2:4192429-4192448 None:intergenic 55.0%
!! GATGGTACCGACGATGGTGT+TGG + chr2.2:4192003-4192022 MS.gene052034:CDS 55.0%
!! GGCCCCTCACGTCTTATTTC+CGG - chr2.2:4192327-4192346 None:intergenic 55.0%
CAGGTCTTGGAGCGTGCTCT+GGG - chr2.2:4191521-4191540 None:intergenic 60.0%
GCCGCCGGAAATAAGACGTG+AGG + chr2.2:4192320-4192339 MS.gene052034:CDS 60.0%
GCTGCACTTGACCTCGAACG+TGG - chr2.2:4192150-4192169 None:intergenic 60.0%
GGCCCACCGGGAATGAAGAT+TGG + chr2.2:4191641-4191660 MS.gene052034:CDS 60.0%
! ACCCGAGCGTTGCATCTTGC+AGG - chr2.2:4191540-4191559 None:intergenic 60.0%
GCAGGTCTTGGAGCGTGCTC+TGG - chr2.2:4191522-4191541 None:intergenic 65.0%
TCACTGTTTGCGGCGGGACC+AGG - chr2.2:4192642-4192661 None:intergenic 65.0%
TCATTCCCGGTGGGCCACCA+AGG - chr2.2:4191637-4191656 None:intergenic 65.0%
! AGGGTGTTCCTCCGCCTTGG+TGG + chr2.2:4191620-4191639 MS.gene052034:CDS 65.0%
TTCCCGGTGGGCCACCAAGG+CGG - chr2.2:4191634-4191653 None:intergenic 70.0%
! CCTCCGCCTTGGTGGCCCAC+CGG + chr2.2:4191628-4191647 MS.gene052034:CDS 75.0%
! CTCCGCCTTGGTGGCCCACC+GGG + chr2.2:4191629-4191648 MS.gene052034:CDS 75.0%
! CCGGTGGGCCACCAAGGCGG+AGG - chr2.2:4191631-4191650 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4190116 4192902 4190116 ID=MS.gene052034
chr2.2 mRNA 4190116 4192902 4190116 ID=MS.gene052034.t1;Parent=MS.gene052034
chr2.2 exon 4190116 4190150 4190116 ID=MS.gene052034.t1.exon1;Parent=MS.gene052034.t1
chr2.2 CDS 4190116 4190150 4190116 ID=cds.MS.gene052034.t1;Parent=MS.gene052034.t1
chr2.2 exon 4191063 4192902 4191063 ID=MS.gene052034.t1.exon2;Parent=MS.gene052034.t1
chr2.2 CDS 4191063 4192902 4191063 ID=cds.MS.gene052034.t1;Parent=MS.gene052034.t1
Gene Sequence

>MS.gene052034

ATGGGTGAACTCGTTGAAATTGGAGCTGATATTGGGTATGTGTAAAAAATTCTCTCTCTTTTTTTTTTTTTTATTATTCTGAGAAATTGAATTTAGGTTTTTGTTTTTGGATTTATATGTAACATGTTTTGTGATTCTCTGTTATTGGTTTTTGTAACTTTTTTGTGGGTTTGTGTTTCTTTGTTCAATGATGTTTTTTTTTTGTTCTGTGAATTTTTGATCAGGTTTTGATCAAATCATGACTTAGTTGGATTGTGTTTATGTGTTGATTAGGTTAACTCTATTGGAATTTACAATTGTTTGTAACTATGTTTTCAATTTGATTGATGATTTGAAGTACTGTGCAATAGGTGTACTGAGGAATCTAAGAGAAGTACATGTTTTGTGTGAAATTCTTGGGGACTTTAATGTTGTTAAAGTGTAAAAATGTCGGTTTATTGTCGGGTTATTAGGGTAGAAAAAATAAGGATTAAAACTTAGTGTGTGTTTGGTGTTGTGGAGGATTTGCCGAAATAACGCTGATTGTAGCTTTTGCCGAATGACATTGAGGAAACTAAGAAATTACATGTGTTATGTGAAATTTTTGGGGACTTTAATGTTGTTAAATTGGAAAAGATGTCGGAAAAGTATGAATTGAAATTTAGTGTATGTTTAATGTCGTTGAGAATTTGCAGAAATCACGGTCATTGTAGCTTTTGCAAAACCACGTGCCTCAATGTGATTTTGGAAAATCCACTTTGATACCAAACATACACTTAACCGATAGCTTGCAGTTTAATGTTTGGTGTTTCAATAATCATTTAGAATATGCAAGTTCACTTGTACATCTTTGGATGCCATTTCAACTTATTTGATAAGTTCAAAGTATGTGCCAATTTATTTTATTGTTCTGTGGATTTTAATTGAATGGAGTATCCTCTGATTAAATGTGATGTACTGAATTGCAGCTCAGATTTAGATGTCGACGATATTAGATATCTCAATATTCCGGAGAAAGATGTCAGTGATGAAGAGATTGAGGCAGAAGATTTGGAGAGGCGGATGTGGAAGGATCGTATCAAACTCAAAAGGCTCAAGGAAAAACAAAAGCTTGCAGCACAGCAAGCCCTAGAGAAGCAAAAGCCGAGGCAGTCATCTGATCAAGCGCGTAGGAAGAAAATGTCGAGGGCACAAGATGGGATTCTTAAGTACATGCTGAAGCTCATGGAAGTGTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAGAAGGGAAAACCAGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTGAAGTTTGATAGGAATGGTCCTGCAGCCATAGCCAAGTATGAAGCAGAGTGTCTTGCTATGAGCGAGGCCGAAAATAACCGAAATGGGAACTCCCAGAGCACGCTCCAAGACCTGCAAGATGCAACGCTCGGGTCACTATTATCTTCTTTGATGCAACACTGTGATCCTCCTCAGAGGAAATATCCATTGGAAAAGGGTGTTCCTCCGCCTTGGTGGCCCACCGGGAATGAAGATTGGTGGTCGCACTTGAATCTACCTCATGGTCAGAGTCCTCCTTATAAGAAACCACATGACTTGAAGAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCACGTCCGCCAATCAAAATGCTTGCAAGACAAGATGACGGCAAAGGAAAGTTCAATTTGGTTGGGGGTATTGAGTCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGCGATAACGGTACGTCTGGAATTACCGATATGCCAACTGGTGTTCTTCTTCTTGAGTATAAGCAACCTGCTGCTAGTAGTGCTAGCAACTATGATGTTGATGGTACCGACGATGGTGTTGGTTCTGTTTCTTCTAAGGAAGACAGGAGCAATCAGTTTATGGATGCCGAACCATCAGATAACTCGCGAAGGAATTCTGTCCAAGATTCCGATCGAGCTAAGAAGCAACCTAGGAAGAAACGACCACGTTCGAGGTCAAGTGCAGCCGACACATTACCAGCACAATCTGACAATGAAATTTTGCATGTTGAACCTAGAAGTAAACTGCCGAATATGAATGAGAGAGACGAAACACATGTAGCTGCACTCCAGATTCATGGGAATGAACAGGTCAATGAGACAGAATCTGTTTTGAGGCCGCCGGAAATAAGACGTGAGGGGCCAAGTCATCTATCTGGAAGCGAGGTGCCAGTTCATTTATCAGGACATGAGGTGCCAGTTCATTTATCAGGACACGGGGTGCCAGTTCATGTAACAGCACCCGGGTTTGATCATTACTCTTATATGCATGCAAACAGTATGATTTCCTCGGAAAGTGTGTTTATGAGTAGACGGCCACCGCTGCACTATTCTCAGTTGCAAAACCCTGTTATGCCTCATGAAGCTGATTATAATCTGTACAATCCAGTCACAAGATATGGTCCCAGTCAGGATGGGCAACATCAACATCTGCAGCCTGGTCCCGCCGCAAACAGTGAACCAATTAGGCAACCAGAGAATGCTGCAATAACTATGCCTGCAGCAAATATGAATGGTGATGAAATTATCGGAGGAGGCATGAATTATCTTGCTAAAGACACATTCCCAAACGAGCTGGATAGGTTTGGATCACCATTATTAGATTTTGGAGTTTTTGAGAATCCACCATCACCATCATTCCTTTTTGATGATATCATGGGTTTGGGTGACGATGAAATGATGCAGTACTTTGGAGCATAG
Protein sequence

>MS.gene052034.t1

MGELVEIGADIGSDLDVDDIRYLNIPEKDVSDEEIEAEDLERRMWKDRIKLKRLKEKQKLAAQQALEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDRNGPAAIAKYEAECLAMSEAENNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSHLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSREEALIRQPSSDNGTSGITDMPTGVLLLEYKQPAASSASNYDVDGTDDGVGSVSSKEDRSNQFMDAEPSDNSRRNSVQDSDRAKKQPRKKRPRSRSSAADTLPAQSDNEILHVEPRSKLPNMNERDETHVAALQIHGNEQVNETESVLRPPEIRREGPSHLSGSEVPVHLSGHEVPVHLSGHGVPVHVTAPGFDHYSYMHANSMISSESVFMSRRPPLHYSQLQNPVMPHEADYNLYNPVTRYGPSQDGQHQHLQPGPAANSEPIRQPENAAITMPAANMNGDEIIGGGMNYLAKDTFPNELDRFGSPLLDFGVFENPPSPSFLFDDIMGLGDDEMMQYFGA