Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053035.t1 | XP_003618155.1 | 96.8 | 506 | 14 | 1 | 1 | 506 | 1 | 504 | 7.20E-285 | 989.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053035.t1 | Q5ZJW8 | 35.5 | 369 | 203 | 5 | 48 | 396 | 43 | 396 | 1.5e-60 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053035.t1 | G7KQ08 | 96.8 | 506 | 14 | 1 | 1 | 506 | 1 | 504 | 5.2e-285 | 989.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene053035 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene053035 | MS.gene78972 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene053035 | MS.gene90876 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene053035 | MS.gene93102 | 0.818402 | 2.00E-52 | -1.69E-46 |
| MS.gene053035 | MS.gene99432 | 0.812138 | 4.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90308 | MS.gene053035 | PPI |
| MS.gene64546 | MS.gene053035 | PPI |
| MS.gene91712 | MS.gene053035 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053035.t1 | MTR_6g005220 | 96.838 | 506 | 14 | 1 | 1 | 506 | 1 | 504 | 0.0 | 1008 |
| MS.gene053035.t1 | MTR_6g005920 | 80.535 | 411 | 51 | 4 | 97 | 506 | 38 | 420 | 0.0 | 607 |
| MS.gene053035.t1 | MTR_7g086360 | 29.167 | 240 | 132 | 8 | 106 | 341 | 96 | 301 | 4.89e-19 | 89.0 |
| MS.gene053035.t1 | MTR_8g092620 | 23.675 | 283 | 174 | 10 | 104 | 385 | 56 | 297 | 1.20e-12 | 68.9 |
| MS.gene053035.t1 | MTR_3g075400 | 23.656 | 279 | 171 | 7 | 110 | 385 | 269 | 508 | 5.73e-12 | 68.2 |
| MS.gene053035.t1 | MTR_8g092620 | 22.826 | 276 | 172 | 9 | 104 | 378 | 63 | 298 | 2.05e-11 | 65.9 |
| MS.gene053035.t1 | MTR_4g104380 | 23.214 | 280 | 171 | 11 | 110 | 385 | 274 | 513 | 4.32e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053035.t1 | AT3G27640 | 47.868 | 516 | 257 | 5 | 1 | 505 | 1 | 515 | 3.11e-156 | 455 |
| MS.gene053035.t1 | AT3G27640 | 47.868 | 516 | 257 | 5 | 1 | 505 | 20 | 534 | 6.82e-156 | 454 |
| MS.gene053035.t1 | AT2G43770 | 27.083 | 240 | 137 | 8 | 106 | 341 | 94 | 299 | 2.20e-19 | 89.7 |
Find 110 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCAGTGTGCTGAAGTTT+TGG | 0.224406 | 6.2:-1214858 | MS.gene053035:intron |
| AGTCCCGAATAGTTCTCTTT+AGG | 0.258046 | 6.2:+1213393 | None:intergenic |
| ACCCTTCTTCGGATGGAAAA+TGG | 0.269667 | 6.2:+1213683 | None:intergenic |
| AACTGCGTTTATTCCATATA+TGG | 0.270324 | 6.2:+1213726 | None:intergenic |
| CGCGAGCTCAATTCCTTTCA+AGG | 0.273508 | 6.2:-1217004 | MS.gene053035:intron |
| CCATTCCAACTAACCTTTCC+TGG | 0.292255 | 6.2:+1214790 | None:intergenic |
| ACACAGATCCTCACTGCTTC+TGG | 0.294885 | 6.2:-1215987 | MS.gene053035:CDS |
| GTCCCGAATAGTTCTCTTTA+GGG | 0.300972 | 6.2:+1213394 | None:intergenic |
| ATAGTGTTACATCTGTTCTT+TGG | 0.306533 | 6.2:-1215014 | MS.gene053035:CDS |
| CCACTGCTGGGGCAGTAAAT+AGG | 0.317952 | 6.2:-1214969 | MS.gene053035:intron |
| AAGTGTCTTGGAGTGTTAAC+AGG | 0.318551 | 6.2:-1215552 | MS.gene053035:CDS |
| ATTGGAGTGGCTGACTTCAC+TGG | 0.321245 | 6.2:+1213557 | None:intergenic |
| CAACTAACCTTTCCTGGTTC+AGG | 0.327191 | 6.2:+1214796 | None:intergenic |
| TTCTCCACGTCTATTAGAAT+TGG | 0.337090 | 6.2:+1215317 | None:intergenic |
| TGAACCCATCCATCGTAATT+AGG | 0.361799 | 6.2:+1216872 | None:intergenic |
| TTCCATCCGAAGAAGGGTTA+TGG | 0.368408 | 6.2:-1213678 | MS.gene053035:CDS |
| TGGGTCATGTGGTTCTTCAT+TGG | 0.373799 | 6.2:+1213577 | None:intergenic |
| TAATACACTTCAACTTGAAA+AGG | 0.389461 | 6.2:-1214327 | MS.gene053035:CDS |
| AAGAACAGATGTAACACTAT+TGG | 0.392621 | 6.2:+1215017 | None:intergenic |
| GAAATCTTACCAGGATTAGT+TGG | 0.396610 | 6.2:+1215495 | None:intergenic |
| ATTAGTTGGATGAGAAGAAA+TGG | 0.403845 | 6.2:+1215509 | None:intergenic |
| GCAACAGTCCACTGTCATCT+TGG | 0.404685 | 6.2:+1214479 | None:intergenic |
| CTTCCCTAAAGAGAACTATT+CGG | 0.408098 | 6.2:-1213397 | MS.gene053035:CDS |
| TAATGACTCTTCAAAATAGT+TGG | 0.408960 | 6.2:+1213985 | None:intergenic |
| CAACTTACCTTGCCCCTCCT+TGG | 0.420211 | 6.2:+1215114 | None:intergenic |
| TTCCCTAAAGAGAACTATTC+GGG | 0.426325 | 6.2:-1213396 | MS.gene053035:CDS |
| TTTGCACTCTGTTCTAGGTA+TGG | 0.429468 | 6.2:+1213655 | None:intergenic |
| AATACACTTCAACTTGAAAA+GGG | 0.432531 | 6.2:-1214326 | MS.gene053035:CDS |
| CTCATTTACAGGTTAAGGTA+TGG | 0.436651 | 6.2:-1215590 | MS.gene053035:intron |
| TGTCCTAAGTCAAGTGACTA+TGG | 0.436683 | 6.2:-1213608 | MS.gene053035:CDS |
| CAAGTTTCCATAGCCACTGC+TGG | 0.445098 | 6.2:-1214982 | MS.gene053035:CDS |
| TTAGTCTCTGGTTCAAGAGA+TGG | 0.446331 | 6.2:-1215372 | MS.gene053035:CDS |
| AAAGACCTAATTACGATGGA+TGG | 0.451394 | 6.2:-1216877 | MS.gene053035:CDS |
| GATGCATCTAACATCGTTTG+TGG | 0.452491 | 6.2:-1214149 | MS.gene053035:CDS |
| GTAATGCAAAAGCATATGTT+TGG | 0.455916 | 6.2:-1214121 | MS.gene053035:CDS |
| AATTACGATGGATGGGTTCA+CGG | 0.458256 | 6.2:-1216869 | MS.gene053035:CDS |
| TGATACTCGTCGAAAATTCA+AGG | 0.459765 | 6.2:-1216609 | MS.gene053035:CDS |
| TACATCTGTTCTTTGGCTCA+AGG | 0.459933 | 6.2:-1215007 | MS.gene053035:CDS |
| TGCAAAAGCATATGTTTGGC+AGG | 0.463133 | 6.2:-1214117 | MS.gene053035:intron |
| CTGCTTCCTGCATGGATAGC+CGG | 0.464384 | 6.2:-1214453 | MS.gene053035:intron |
| TATTCTTGCTTTGTCTAATG+AGG | 0.469123 | 6.2:-1216651 | MS.gene053035:CDS |
| TCTTCTCATCCAACTAATCC+TGG | 0.470498 | 6.2:-1215504 | MS.gene053035:intron |
| CAAACGATGTTAGATGCATC+GGG | 0.471565 | 6.2:+1214152 | None:intergenic |
| CACTGCTTCTGGAGATCAAA+CGG | 0.476414 | 6.2:-1215976 | MS.gene053035:intron |
| GTTCAAGAAAAGAAGTGTCT+TGG | 0.477207 | 6.2:-1215564 | MS.gene053035:CDS |
| GTTGCTTTCTGCTTCCTGCA+TGG | 0.478726 | 6.2:-1214461 | MS.gene053035:CDS |
| CAACAGTCCACTGTCATCTT+GGG | 0.479623 | 6.2:+1214480 | None:intergenic |
| GTATGGCCATAACCCTTCTT+CGG | 0.481816 | 6.2:+1213672 | None:intergenic |
| GGGGCTTTAAGATACTTTGA+AGG | 0.483334 | 6.2:-1214305 | MS.gene053035:CDS |
| AAAGCTGGTTCTTGTGGCTG+TGG | 0.487249 | 6.2:+1213504 | None:intergenic |
| GGGCTCTTCAAAGCAGACTC+TGG | 0.491351 | 6.2:+1213443 | None:intergenic |
| TGAAGTTGTGAGGTTGAAGA+AGG | 0.491472 | 6.2:+1217027 | None:intergenic |
| GATCAAATTCTGATGAAAGC+TGG | 0.491554 | 6.2:+1213489 | None:intergenic |
| TACTGCCCCAGCAGTGGCTA+TGG | 0.494116 | 6.2:+1214975 | None:intergenic |
| ATTACGATGGATGGGTTCAC+GGG | 0.495331 | 6.2:-1216868 | MS.gene053035:CDS |
| GTTCACGGGTTCTTTGATGT+TGG | 0.503575 | 6.2:-1216854 | MS.gene053035:CDS |
| AAAATAGTTGGTTCCACTTG+AGG | 0.505140 | 6.2:+1213997 | None:intergenic |
| TCTTGCTCTTTCGTTCGCTA+AGG | 0.506801 | 6.2:-1216792 | MS.gene053035:intron |
| GGCCATAACCCTTCTTCGGA+TGG | 0.512458 | 6.2:+1213676 | None:intergenic |
| CTTGCTTTGTCTAATGAGGA+GGG | 0.518227 | 6.2:-1216647 | MS.gene053035:CDS |
| ACAAACGATGTTAGATGCAT+CGG | 0.518389 | 6.2:+1214151 | None:intergenic |
| TCAAGGACTACGACCAAGGA+GGG | 0.523704 | 6.2:-1215127 | MS.gene053035:CDS |
| TTGGAGTGGCTGACTTCACT+GGG | 0.525301 | 6.2:+1213558 | None:intergenic |
| TCATTTACAGGTTAAGGTAT+GGG | 0.528918 | 6.2:-1215589 | MS.gene053035:intron |
| AGGAAGTTACTGCAGTTGAC+TGG | 0.531215 | 6.2:-1213960 | MS.gene053035:intron |
| AGGATACCGGCTATCCATGC+AGG | 0.534164 | 6.2:+1214447 | None:intergenic |
| AGACCATAGTCACTTGACTT+AGG | 0.534526 | 6.2:+1213605 | None:intergenic |
| CTGATGAAAGCTGGTTCTTG+TGG | 0.537490 | 6.2:+1213498 | None:intergenic |
| AAGTTTCCATAGCCACTGCT+GGG | 0.538834 | 6.2:-1214981 | MS.gene053035:CDS |
| TCTTGCTTTGTCTAATGAGG+AGG | 0.540053 | 6.2:-1216648 | MS.gene053035:CDS |
| AGTTCAACGGATGTTGTCAA+TGG | 0.542543 | 6.2:-1215165 | MS.gene053035:CDS |
| GGAGCACATATTCTGTATCA+AGG | 0.544194 | 6.2:-1215144 | MS.gene053035:CDS |
| CTAATATTCCATTGTCAGAC+CGG | 0.544954 | 6.2:+1213862 | None:intergenic |
| AGGAAGCGAGGATTTGTGAA+TGG | 0.548773 | 6.2:-1216187 | MS.gene053035:CDS |
| TGTTTGCTTCTCTAGTTCAA+CGG | 0.549906 | 6.2:-1215178 | MS.gene053035:intron |
| GACGTGGAGAAGTTAGCATA+TGG | 0.554547 | 6.2:-1215305 | MS.gene053035:intron |
| TGCAGGTGCCGGTCTGACAA+TGG | 0.566626 | 6.2:-1213870 | MS.gene053035:intron |
| AAGACCTAATTACGATGGAT+GGG | 0.570767 | 6.2:-1216876 | MS.gene053035:CDS |
| CAGTGTCTAGAAAGAAATGC+AGG | 0.575259 | 6.2:-1216581 | MS.gene053035:intron |
| GCTGACTTCACTGGGTCATG+TGG | 0.579794 | 6.2:+1213566 | None:intergenic |
| TACACTTCAACTTGAAAAGG+GGG | 0.579993 | 6.2:-1214324 | MS.gene053035:CDS |
| TCCTTTCAGCAAAGATTACA+CGG | 0.580848 | 6.2:-1214517 | MS.gene053035:intron |
| CGAATAGTTCTCTTTAGGGA+AGG | 0.581795 | 6.2:+1213398 | None:intergenic |
| AGCATGTCCTGAACCAGGAA+AGG | 0.585501 | 6.2:-1214803 | MS.gene053035:intron |
| GTTCTCTTTAGGGAAGGCGG+TGG | 0.586355 | 6.2:+1213404 | None:intergenic |
| TTTAGGTGGTGTGATTGGAG+TGG | 0.589905 | 6.2:+1213544 | None:intergenic |
| ACACAAGCATGTCCTGAACC+AGG | 0.600579 | 6.2:-1214808 | MS.gene053035:CDS |
| TCAGGTTGACAAGCCTCAAG+TGG | 0.600772 | 6.2:-1214010 | MS.gene053035:intron |
| ATACACTTCAACTTGAAAAG+GGG | 0.605256 | 6.2:-1214325 | MS.gene053035:CDS |
| TGTATCAAGGACTACGACCA+AGG | 0.613332 | 6.2:-1215131 | MS.gene053035:CDS |
| GCTTTAAGATACTTTGAAGG+AGG | 0.615669 | 6.2:-1214302 | MS.gene053035:CDS |
| CCTATTTACTGCCCCAGCAG+TGG | 0.615720 | 6.2:+1214969 | None:intergenic |
| TTAGCGAACGAAAGAGCAAG+AGG | 0.623702 | 6.2:+1216794 | None:intergenic |
| AGTGTCTTGGAGTGTTAACA+GGG | 0.627221 | 6.2:-1215551 | MS.gene053035:CDS |
| GTGGATTCAATACAGACGAA+GGG | 0.630002 | 6.2:+1213423 | None:intergenic |
| ACTACGACCAAGGAGGGGCA+AGG | 0.633313 | 6.2:-1215121 | MS.gene053035:intron |
| ATAGTTCTCTTTAGGGAAGG+CGG | 0.633574 | 6.2:+1213401 | None:intergenic |
| AACTCCAATTCTAATAGACG+TGG | 0.646011 | 6.2:-1215321 | MS.gene053035:CDS |
| TGAGCTCGCGTGAAGTTGTG+AGG | 0.654520 | 6.2:+1217017 | None:intergenic |
| GGTGGATTCAATACAGACGA+AGG | 0.656152 | 6.2:+1213422 | None:intergenic |
| TCTTGATATCAGAGGAAGCG+AGG | 0.662534 | 6.2:-1216199 | MS.gene053035:intron |
| GCTGTAGCTACTCAGCATAA+CGG | 0.663584 | 6.2:-1216830 | MS.gene053035:CDS |
| CAAGGACTACGACCAAGGAG+GGG | 0.667467 | 6.2:-1215126 | MS.gene053035:CDS |
| GGAGTGTTAACAGGGCACAC+AGG | 0.670888 | 6.2:-1215543 | MS.gene053035:CDS |
| ATCAAGGACTACGACCAAGG+AGG | 0.673071 | 6.2:-1215128 | MS.gene053035:CDS |
| AGTTTCCATAGCCACTGCTG+GGG | 0.674317 | 6.2:-1214980 | MS.gene053035:CDS |
| GCATTTCTTTCTAGACACTG+AGG | 0.702558 | 6.2:+1216584 | None:intergenic |
| AGCTTGTCCCAAGATGACAG+TGG | 0.704030 | 6.2:-1214487 | MS.gene053035:CDS |
| TTTGATCTCCAGAAGCAGTG+AGG | 0.721465 | 6.2:+1215979 | None:intergenic |
| AAACGATGTTAGATGCATCG+GGG | 0.767496 | 6.2:+1214153 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAAAAAATACTATTT+AGG | + | chr6.2:1216001-1216020 | None:intergenic | 10.0% |
| !!! | AATTGATTTTACTATTTAAA+TGG | - | chr6.2:1215538-1215557 | MS.gene053035:CDS | 10.0% |
| !!! | TATTGAATCATTTTTTATTA+AGG | - | chr6.2:1216146-1216165 | MS.gene053035:CDS | 10.0% |
| !!! | AACTTCAAATTATATTTTGA+AGG | + | chr6.2:1215496-1215515 | None:intergenic | 15.0% |
| !!! | ACTTCAAATTATATTTTGAA+GGG | + | chr6.2:1215495-1215514 | None:intergenic | 15.0% |
| !!! | TTTATTTTGTCATCTTAAAT+TGG | - | chr6.2:1214389-1214408 | MS.gene053035:intron | 15.0% |
| !!! | TTTTATATTGAATGTTCTTA+TGG | - | chr6.2:1214807-1214826 | MS.gene053035:CDS | 15.0% |
| !! | AATCATAGTTCAATTTATTC+AGG | + | chr6.2:1215727-1215746 | None:intergenic | 20.0% |
| !! | CATATAATTGCAAAAATTGA+AGG | + | chr6.2:1214307-1214326 | None:intergenic | 20.0% |
| !! | GATTAATATGTTTACTAAGA+GGG | - | chr6.2:1215743-1215762 | MS.gene053035:intron | 20.0% |
| !! | TACAAAAAATACTATTTAGG+AGG | + | chr6.2:1215998-1216017 | None:intergenic | 20.0% |
| !! | TGATTAATATGTTTACTAAG+AGG | - | chr6.2:1215742-1215761 | MS.gene053035:intron | 20.0% |
| !! | TGTTCATAAAATCTACAAAT+AGG | - | chr6.2:1214325-1214344 | MS.gene053035:CDS | 20.0% |
| !! | TTATGCAGAAAATATTATGT+GGG | - | chr6.2:1213689-1213708 | MS.gene053035:CDS | 20.0% |
| !! | TTCAAATTATAAACAGTGTT+AGG | + | chr6.2:1214054-1214073 | None:intergenic | 20.0% |
| !! | TTTATGCAGAAAATATTATG+TGG | - | chr6.2:1213688-1213707 | MS.gene053035:CDS | 20.0% |
| !!! | AAGTTTTTTTAAGCTTTTAG+CGG | - | chr6.2:1215511-1215530 | MS.gene053035:CDS | 20.0% |
| !!! | ACTTGTTAAATTTTGAATCA+AGG | - | chr6.2:1214568-1214587 | MS.gene053035:intron | 20.0% |
| !!! | ATATACTTTAAGAGAACATT+CGG | + | chr6.2:1215216-1215235 | None:intergenic | 20.0% |
| !!! | ATTTTCTGCATAAAAACAAA+AGG | + | chr6.2:1213682-1213701 | None:intergenic | 20.0% |
| !!! | ATTTTGAGTTTTGATCAAAT+TGG | - | chr6.2:1213887-1213906 | MS.gene053035:intron | 20.0% |
| !!! | ATTTTTTGTAAATCAAACCA+TGG | - | chr6.2:1216008-1216027 | MS.gene053035:intron | 20.0% |
| !!! | GACAATACTTTTTAAATTTC+TGG | + | chr6.2:1215594-1215613 | None:intergenic | 20.0% |
| !!! | TAACTTAACTTTTACAAATC+AGG | - | chr6.2:1216394-1216413 | MS.gene053035:intron | 20.0% |
| !!! | TCGATTTTTCTAACATTTTA+GGG | - | chr6.2:1213497-1213516 | MS.gene053035:CDS | 20.0% |
| !!! | TTCATTAAAAACTTGTTAAC+AGG | + | chr6.2:1215193-1215212 | None:intergenic | 20.0% |
| !!! | TTCGATTTTTCTAACATTTT+AGG | - | chr6.2:1213496-1213515 | MS.gene053035:CDS | 20.0% |
| !!! | TTTTTATTAAGGTGAGAATT+TGG | - | chr6.2:1216157-1216176 | MS.gene053035:CDS | 20.0% |
| ! | AACAAGTTCTGCAATTTAAA+AGG | + | chr6.2:1214667-1214686 | None:intergenic | 25.0% |
| ! | AATACACTTCAACTTGAAAA+GGG | - | chr6.2:1216096-1216115 | MS.gene053035:intron | 25.0% |
| ! | ACAAGTTCTGCAATTTAAAA+GGG | + | chr6.2:1214666-1214685 | None:intergenic | 25.0% |
| ! | ATCCCAAAATCAAAAAACAA+TGG | + | chr6.2:1213718-1213737 | None:intergenic | 25.0% |
| ! | CAATCAACTACTTTATAGTT+TGG | - | chr6.2:1216344-1216363 | MS.gene053035:intron | 25.0% |
| ! | GATCTAAAAATGCAAAATTG+GGG | + | chr6.2:1216677-1216696 | None:intergenic | 25.0% |
| ! | GGATCTAAAAATGCAAAATT+GGG | + | chr6.2:1216678-1216697 | None:intergenic | 25.0% |
| ! | TAATACACTTCAACTTGAAA+AGG | - | chr6.2:1216095-1216114 | MS.gene053035:intron | 25.0% |
| ! | TAATGACTCTTCAAAATAGT+TGG | + | chr6.2:1216440-1216459 | None:intergenic | 25.0% |
| ! | TACTTTATAGTTTGGTACTT+TGG | - | chr6.2:1216352-1216371 | MS.gene053035:intron | 25.0% |
| ! | TCAATATAAAACCAGCTTAA+AGG | + | chr6.2:1214798-1214817 | None:intergenic | 25.0% |
| ! | TGGATCTAAAAATGCAAAAT+TGG | + | chr6.2:1216679-1216698 | None:intergenic | 25.0% |
| ! | TTCAATGTAATTACATGTGT+CGG | - | chr6.2:1214086-1214105 | MS.gene053035:intron | 25.0% |
| !! | AAACTTGATGCAAGAAATTT+TGG | + | chr6.2:1216191-1216210 | None:intergenic | 25.0% |
| !! | AACTTGATGCAAGAAATTTT+GGG | + | chr6.2:1216190-1216209 | None:intergenic | 25.0% |
| !! | AAGTGAGTGATGAATTTTAA+CGG | + | chr6.2:1213445-1213464 | None:intergenic | 25.0% |
| !! | ATTGGTTTACATTTATTTGC+AGG | - | chr6.2:1214407-1214426 | MS.gene053035:intron | 25.0% |
| !! | TTTTGATGTCAATTGGATTA+AGG | - | chr6.2:1214278-1214297 | MS.gene053035:CDS | 25.0% |
| !!! | AATCTGTATATTGTTTTAGC+AGG | + | chr6.2:1214504-1214523 | None:intergenic | 25.0% |
| !!! | CACCATTGTTTTTTGATTTT+GGG | - | chr6.2:1213713-1213732 | MS.gene053035:CDS | 25.0% |
| !!! | TAACATTTTAGGGTTTTTCA+TGG | - | chr6.2:1213507-1213526 | MS.gene053035:CDS | 25.0% |
| !!! | TCACCATTGTTTTTTGATTT+TGG | - | chr6.2:1213712-1213731 | MS.gene053035:CDS | 25.0% |
| !!! | TCTAACTTAATTTGTTTTGC+AGG | - | chr6.2:1216535-1216554 | MS.gene053035:intron | 25.0% |
| !!! | TCTATGTTTTTACAATGTAC+TGG | - | chr6.2:1214964-1214983 | MS.gene053035:intron | 25.0% |
| !!! | TGCATTTTTAGATCCATATA+TGG | - | chr6.2:1216683-1216702 | MS.gene053035:intron | 25.0% |
| AACTGCGTTTATTCCATATA+TGG | + | chr6.2:1216699-1216718 | None:intergenic | 30.0% | |
| AAGAACAGATGTAACACTAT+TGG | + | chr6.2:1215408-1215427 | None:intergenic | 30.0% | |
| AAGTTCTGCAATTTAAAAGG+GGG | + | chr6.2:1214664-1214683 | None:intergenic | 30.0% | |
| AATACTATTTAGGAGGATAC+CGG | + | chr6.2:1215991-1216010 | None:intergenic | 30.0% | |
| AGTTTATATACAACGAGTCT+GGG | - | chr6.2:1215682-1215701 | MS.gene053035:intron | 30.0% | |
| ATACACAAAGAAATCTTACC+AGG | + | chr6.2:1214939-1214958 | None:intergenic | 30.0% | |
| ATACACTTCAACTTGAAAAG+GGG | - | chr6.2:1216097-1216116 | MS.gene053035:intron | 30.0% | |
| ATAGTGTTACATCTGTTCTT+TGG | - | chr6.2:1215408-1215427 | MS.gene053035:intron | 30.0% | |
| ATTAGTTGGATGAGAAGAAA+TGG | + | chr6.2:1214916-1214935 | None:intergenic | 30.0% | |
| CAAGTTCTGCAATTTAAAAG+GGG | + | chr6.2:1214665-1214684 | None:intergenic | 30.0% | |
| GACTAAAATATCTGCAAGTT+TGG | + | chr6.2:1215036-1215055 | None:intergenic | 30.0% | |
| GTTAGAATCTCATATCAGAT+CGG | + | chr6.2:1216521-1216540 | None:intergenic | 30.0% | |
| TAGTTTATATACAACGAGTC+TGG | - | chr6.2:1215681-1215700 | MS.gene053035:intron | 30.0% | |
| TATTAGTTAGACTTGAAGCA+TGG | - | chr6.2:1213910-1213929 | MS.gene053035:intron | 30.0% | |
| TATTCTTGCTTTGTCTAATG+AGG | - | chr6.2:1213771-1213790 | MS.gene053035:intron | 30.0% | |
| TCATTTACAGGTTAAGGTAT+GGG | - | chr6.2:1214833-1214852 | MS.gene053035:CDS | 30.0% | |
| TGACTGGTAAATTGGAAATT+AGG | - | chr6.2:1216478-1216497 | MS.gene053035:intron | 30.0% | |
| TGTTAGACACTTACATGTAT+CGG | - | chr6.2:1214109-1214128 | MS.gene053035:intron | 30.0% | |
| ! | ATGCAGTTTTTGATGTCAAT+TGG | - | chr6.2:1214271-1214290 | MS.gene053035:intron | 30.0% |
| ! | GTAATGCAAAAGCATATGTT+TGG | - | chr6.2:1216301-1216320 | MS.gene053035:intron | 30.0% |
| ! | TCATAGCATTGAGTTAGAAT+TGG | - | chr6.2:1214727-1214746 | MS.gene053035:intron | 30.0% |
| !! | CATTCAGATGTAGTTGTTTT+AGG | + | chr6.2:1216898-1216917 | None:intergenic | 30.0% |
| !! | TATTTTGAAGAGTCATTACG+AGG | - | chr6.2:1216442-1216461 | MS.gene053035:intron | 30.0% |
| !!! | TGGAGTTTTTTTAGGAGATA+TGG | + | chr6.2:1216962-1216981 | None:intergenic | 30.0% |
| AAAGACCTAATTACGATGGA+TGG | - | chr6.2:1213545-1213564 | MS.gene053035:CDS | 35.0% | |
| AACTCCAATTCTAATAGACG+TGG | - | chr6.2:1215101-1215120 | MS.gene053035:intron | 35.0% | |
| AAGACCTAATTACGATGGAT+GGG | - | chr6.2:1213546-1213565 | MS.gene053035:CDS | 35.0% | |
| ACAAACGATGTTAGATGCAT+CGG | + | chr6.2:1216274-1216293 | None:intergenic | 35.0% | |
| ATGAGTAGTTTCCTTTAAGC+TGG | - | chr6.2:1214784-1214803 | MS.gene053035:intron | 35.0% | |
| CGAAAAAGACCTAATTACGA+TGG | - | chr6.2:1213541-1213560 | MS.gene053035:CDS | 35.0% | |
| CTAATATTCCATTGTCAGAC+CGG | + | chr6.2:1216563-1216582 | None:intergenic | 35.0% | |
| CTATGCAGTGTTTCAAAATG+TGG | + | chr6.2:1214597-1214616 | None:intergenic | 35.0% | |
| CTCATTTACAGGTTAAGGTA+TGG | - | chr6.2:1214832-1214851 | MS.gene053035:CDS | 35.0% | |
| CTTCCCTAAAGAGAACTATT+CGG | - | chr6.2:1217025-1217044 | MS.gene053035:CDS | 35.0% | |
| GATCAAATTCTGATGAAAGC+TGG | + | chr6.2:1216936-1216955 | None:intergenic | 35.0% | |
| GATGAAAATTCTCGAAACCA+TGG | + | chr6.2:1216028-1216047 | None:intergenic | 35.0% | |
| GGTAAATTGGAAATTAGGCA+TGG | - | chr6.2:1216483-1216502 | MS.gene053035:intron | 35.0% | |
| GTTTATATACAACGAGTCTG+GGG | - | chr6.2:1215683-1215702 | MS.gene053035:intron | 35.0% | |
| TACACTTCAACTTGAAAAGG+GGG | - | chr6.2:1216098-1216117 | MS.gene053035:intron | 35.0% | |
| TCCTTTCAGCAAAGATTACA+CGG | - | chr6.2:1215905-1215924 | MS.gene053035:intron | 35.0% | |
| TGATACTCGTCGAAAATTCA+AGG | - | chr6.2:1213813-1213832 | MS.gene053035:intron | 35.0% | |
| TTCCCTAAAGAGAACTATTC+GGG | - | chr6.2:1217026-1217045 | MS.gene053035:CDS | 35.0% | |
| TTCTCCACGTCTATTAGAAT+TGG | + | chr6.2:1215108-1215127 | None:intergenic | 35.0% | |
| TTCTTATGGTGCTCATTTAC+AGG | - | chr6.2:1214821-1214840 | MS.gene053035:CDS | 35.0% | |
| ! | AAAATAGTTGGTTCCACTTG+AGG | + | chr6.2:1216428-1216447 | None:intergenic | 35.0% |
| ! | AAGAAGGATTGAGATTTTCG+AGG | + | chr6.2:1213382-1213401 | None:intergenic | 35.0% |
| ! | AGATGGATCTTTTCGTCTTT+GGG | - | chr6.2:1215067-1215086 | MS.gene053035:intron | 35.0% |
| ! | AGGTTAGAGTTGTTGTTAGA+AGG | + | chr6.2:1215373-1215392 | None:intergenic | 35.0% |
| ! | ATTTTGCCTCTTGATATCAG+AGG | - | chr6.2:1214215-1214234 | MS.gene053035:intron | 35.0% |
| ! | CTTGGAAGGATAAGAAGTAT+TGG | - | chr6.2:1214135-1214154 | MS.gene053035:CDS | 35.0% |
| ! | GAAATCTTACCAGGATTAGT+TGG | + | chr6.2:1214930-1214949 | None:intergenic | 35.0% |
| ! | GAGGGTATATGCATTTCTTA+TGG | - | chr6.2:1215761-1215780 | MS.gene053035:intron | 35.0% |
| ! | GGTTAGAGTTGTTGTTAGAA+GGG | + | chr6.2:1215372-1215391 | None:intergenic | 35.0% |
| ! | TGTTTGCTTCTCTAGTTCAA+CGG | - | chr6.2:1215244-1215263 | MS.gene053035:intron | 35.0% |
| !! | GAATTTTAACGGACCTTGAA+AGG | + | chr6.2:1213434-1213453 | None:intergenic | 35.0% |
| !! | GCTTTAAGATACTTTGAAGG+AGG | - | chr6.2:1216120-1216139 | MS.gene053035:intron | 35.0% |
| !! | GTTCAAGAAAAGAAGTGTCT+TGG | - | chr6.2:1214858-1214877 | MS.gene053035:intron | 35.0% |
| !!! | CACATTTTGAAACACTGCAT+AGG | - | chr6.2:1214595-1214614 | MS.gene053035:intron | 35.0% |
| !!! | CTTGCAGATATTTTAGTCTC+TGG | - | chr6.2:1215038-1215057 | MS.gene053035:intron | 35.0% |
| !!! | TCAGATGTAGTTGTTTTAGG+TGG | + | chr6.2:1216895-1216914 | None:intergenic | 35.0% |
| !!! | TTAATTTGTTTTGCAGGTGC+CGG | - | chr6.2:1216541-1216560 | MS.gene053035:intron | 35.0% |
| AAACGATGTTAGATGCATCG+GGG | + | chr6.2:1216272-1216291 | None:intergenic | 40.0% | |
| AACAACAACTCTAACCTGTC+AGG | - | chr6.2:1215376-1215395 | MS.gene053035:CDS | 40.0% | |
| ACAAGTGTCATGTGAGAATC+AGG | + | chr6.2:1214554-1214573 | None:intergenic | 40.0% | |
| ACCGTGTAATCTTTGCTGAA+AGG | + | chr6.2:1215909-1215928 | None:intergenic | 40.0% | |
| ACTGCAGTTGACTGGTAAAT+TGG | - | chr6.2:1216470-1216489 | MS.gene053035:intron | 40.0% | |
| ACTTACATGTATCGGACACT+TGG | - | chr6.2:1214117-1214136 | MS.gene053035:intron | 40.0% | |
| AGACCATAGTCACTTGACTT+AGG | + | chr6.2:1216820-1216839 | None:intergenic | 40.0% | |
| AGTCCCGAATAGTTCTCTTT+AGG | + | chr6.2:1217032-1217051 | None:intergenic | 40.0% | |
| AGTTCAACGGATGTTGTCAA+TGG | - | chr6.2:1215257-1215276 | MS.gene053035:intron | 40.0% | |
| CAAACGATGTTAGATGCATC+GGG | + | chr6.2:1216273-1216292 | None:intergenic | 40.0% | |
| CAGTGTCTAGAAAGAAATGC+AGG | - | chr6.2:1213841-1213860 | MS.gene053035:CDS | 40.0% | |
| CTTGCTTTGTCTAATGAGGA+GGG | - | chr6.2:1213775-1213794 | MS.gene053035:intron | 40.0% | |
| GATGCATCTAACATCGTTTG+TGG | - | chr6.2:1216273-1216292 | MS.gene053035:intron | 40.0% | |
| GCATTTCTTTCTAGACACTG+AGG | + | chr6.2:1213841-1213860 | None:intergenic | 40.0% | |
| GGAATTGAACACATGAGACA+GGG | + | chr6.2:1216236-1216255 | None:intergenic | 40.0% | |
| GGAGCACATATTCTGTATCA+AGG | - | chr6.2:1215278-1215297 | MS.gene053035:intron | 40.0% | |
| GTCCCGAATAGTTCTCTTTA+GGG | + | chr6.2:1217031-1217050 | None:intergenic | 40.0% | |
| GTGGATTCAATACAGACGAA+GGG | + | chr6.2:1217002-1217021 | None:intergenic | 40.0% | |
| TCTGGGGAGTTTACAAATTG+AGG | - | chr6.2:1215699-1215718 | MS.gene053035:intron | 40.0% | |
| TCTTCTCATCCAACTAATCC+TGG | - | chr6.2:1214918-1214937 | MS.gene053035:intron | 40.0% | |
| TCTTGCTTTGTCTAATGAGG+AGG | - | chr6.2:1213774-1213793 | MS.gene053035:intron | 40.0% | |
| TGAACCCATCCATCGTAATT+AGG | + | chr6.2:1213553-1213572 | None:intergenic | 40.0% | |
| TGAAGTTGTGAGGTTGAAGA+AGG | + | chr6.2:1213398-1213417 | None:intergenic | 40.0% | |
| TGGAATTGAACACATGAGAC+AGG | + | chr6.2:1216237-1216256 | None:intergenic | 40.0% | |
| TGGTGCTCATTTACAGGTTA+AGG | - | chr6.2:1214827-1214846 | MS.gene053035:CDS | 40.0% | |
| TGTCCTAAGTCAAGTGACTA+TGG | - | chr6.2:1216814-1216833 | MS.gene053035:CDS | 40.0% | |
| TGTCTCATGTGTTCAATTCC+AGG | - | chr6.2:1216236-1216255 | MS.gene053035:intron | 40.0% | |
| TTGGTACTTTGGTTGCAGTA+AGG | - | chr6.2:1216363-1216382 | MS.gene053035:intron | 40.0% | |
| ! | AAGTGTCTTGGAGTGTTAAC+AGG | - | chr6.2:1214870-1214889 | MS.gene053035:intron | 40.0% |
| ! | AATTACGATGGATGGGTTCA+CGG | - | chr6.2:1213553-1213572 | MS.gene053035:CDS | 40.0% |
| ! | AGCATTTTGCACTCTGTTCT+AGG | + | chr6.2:1216775-1216794 | None:intergenic | 40.0% |
| ! | AGTGTCTTGGAGTGTTAACA+GGG | - | chr6.2:1214871-1214890 | MS.gene053035:intron | 40.0% |
| ! | ATAGTTCTCTTTAGGGAAGG+CGG | + | chr6.2:1217024-1217043 | None:intergenic | 40.0% |
| ! | ATTCCAGTGTGCTGAAGTTT+TGG | - | chr6.2:1215564-1215583 | MS.gene053035:CDS | 40.0% |
| ! | CGAATAGTTCTCTTTAGGGA+AGG | + | chr6.2:1217027-1217046 | None:intergenic | 40.0% |
| ! | GAGATGGATCTTTTCGTCTT+TGG | - | chr6.2:1215066-1215085 | MS.gene053035:intron | 40.0% |
| ! | TACATCTGTTCTTTGGCTCA+AGG | - | chr6.2:1215415-1215434 | MS.gene053035:intron | 40.0% |
| ! | TCCATTTTCCATCCGAAGAA+GGG | - | chr6.2:1216738-1216757 | MS.gene053035:intron | 40.0% |
| ! | TGCAAAAGCATATGTTTGGC+AGG | - | chr6.2:1216305-1216324 | MS.gene053035:intron | 40.0% |
| ! | TGCAATTTAAAAGGGGGTAC+TGG | + | chr6.2:1214658-1214677 | None:intergenic | 40.0% |
| ! | TTAGTCTCTGGTTCAAGAGA+TGG | - | chr6.2:1215050-1215069 | MS.gene053035:intron | 40.0% |
| ! | TTCCAGTGTGCTGAAGTTTT+GGG | - | chr6.2:1215565-1215584 | MS.gene053035:CDS | 40.0% |
| ! | TTTGCACTCTGTTCTAGGTA+TGG | + | chr6.2:1216770-1216789 | None:intergenic | 40.0% |
| !! | ACACTGCATAGGTTGATTGT+TGG | - | chr6.2:1214606-1214625 | MS.gene053035:intron | 40.0% |
| !! | GGGGCTTTAAGATACTTTGA+AGG | - | chr6.2:1216117-1216136 | MS.gene053035:intron | 40.0% |
| !!! | GCAGACTCTGGAGTTTTTTT+AGG | + | chr6.2:1216970-1216989 | None:intergenic | 40.0% |
| !!! | GTTGTTTTAGGTGGTGTGAT+TGG | + | chr6.2:1216886-1216905 | None:intergenic | 40.0% |
| AAGTTTCCATAGCCACTGCT+GGG | - | chr6.2:1215441-1215460 | MS.gene053035:intron | 45.0% | |
| AATGGAACTGAGATGTGCAG+TGG | - | chr6.2:1215650-1215669 | MS.gene053035:intron | 45.0% | |
| ACATGTATCGGACACTTGGA+AGG | - | chr6.2:1214121-1214140 | MS.gene053035:CDS | 45.0% | |
| ACCCTTCTTCGGATGGAAAA+TGG | + | chr6.2:1216742-1216761 | None:intergenic | 45.0% | |
| ACTATTGGAAGCAACCTGAC+AGG | + | chr6.2:1215393-1215412 | None:intergenic | 45.0% | |
| AGGAAGCGAGGATTTGTGAA+TGG | - | chr6.2:1214235-1214254 | MS.gene053035:intron | 45.0% | |
| AGGAAGTTACTGCAGTTGAC+TGG | - | chr6.2:1216462-1216481 | MS.gene053035:intron | 45.0% | |
| ATCCCAAAACTTCAGCACAC+TGG | + | chr6.2:1215570-1215589 | None:intergenic | 45.0% | |
| CAACAGTCCACTGTCATCTT+GGG | + | chr6.2:1215945-1215964 | None:intergenic | 45.0% | |
| CAACTAACCTTTCCTGGTTC+AGG | + | chr6.2:1215629-1215648 | None:intergenic | 45.0% | |
| CATGAGACAGGGAAAAAGTC+AGG | + | chr6.2:1216225-1216244 | None:intergenic | 45.0% | |
| CCATTCCAACTAACCTTTCC+TGG | + | chr6.2:1215635-1215654 | None:intergenic | 45.0% | |
| CTGAACCAGGAAAGGTTAGT+TGG | - | chr6.2:1215627-1215646 | MS.gene053035:intron | 45.0% | |
| GACGTGGAGAAGTTAGCATA+TGG | - | chr6.2:1215117-1215136 | MS.gene053035:intron | 45.0% | |
| GCTGTAGCTACTCAGCATAA+CGG | - | chr6.2:1213592-1213611 | MS.gene053035:CDS | 45.0% | |
| GGATCGACACTTCTGATCAA+AGG | + | chr6.2:1214033-1214052 | None:intergenic | 45.0% | |
| GTATGGCCATAACCCTTCTT+CGG | + | chr6.2:1216753-1216772 | None:intergenic | 45.0% | |
| GTTCACGGGTTCTTTGATGT+TGG | - | chr6.2:1213568-1213587 | MS.gene053035:CDS | 45.0% | |
| TCGCTTCCTCTGATATCAAG+AGG | + | chr6.2:1214224-1214243 | None:intergenic | 45.0% | |
| TCTTGATATCAGAGGAAGCG+AGG | - | chr6.2:1214223-1214242 | MS.gene053035:intron | 45.0% | |
| TCTTGCTCTTTCGTTCGCTA+AGG | - | chr6.2:1213630-1213649 | MS.gene053035:CDS | 45.0% | |
| TGGGTCATGTGGTTCTTCAT+TGG | + | chr6.2:1216848-1216867 | None:intergenic | 45.0% | |
| TGTATCAAGGACTACGACCA+AGG | - | chr6.2:1215291-1215310 | MS.gene053035:intron | 45.0% | |
| TTAGCGAACGAAAGAGCAAG+AGG | + | chr6.2:1213631-1213650 | None:intergenic | 45.0% | |
| TTCCATCCGAAGAAGGGTTA+TGG | - | chr6.2:1216744-1216763 | MS.gene053035:intron | 45.0% | |
| TTTAGGTGGTGTGATTGGAG+TGG | + | chr6.2:1216881-1216900 | None:intergenic | 45.0% | |
| TTTGATCTCCAGAAGCAGTG+AGG | + | chr6.2:1214446-1214465 | None:intergenic | 45.0% | |
| ! | ATTACGATGGATGGGTTCAC+GGG | - | chr6.2:1213554-1213573 | MS.gene053035:CDS | 45.0% |
| ! | CACTGCTTCTGGAGATCAAA+CGG | - | chr6.2:1214446-1214465 | MS.gene053035:intron | 45.0% |
| ! | CCAGGAAAGGTTAGTTGGAA+TGG | - | chr6.2:1215632-1215651 | MS.gene053035:intron | 45.0% |
| ! | CTCCATTTTCCATCCGAAGA+AGG | - | chr6.2:1216737-1216756 | MS.gene053035:intron | 45.0% |
| ! | CTGATGAAAGCTGGTTCTTG+TGG | + | chr6.2:1216927-1216946 | None:intergenic | 45.0% |
| ! | GGTGGATTCAATACAGACGA+AGG | + | chr6.2:1217003-1217022 | None:intergenic | 45.0% |
| !! | AAAAGGGGGTACTGGATGTT+GGG | + | chr6.2:1214650-1214669 | None:intergenic | 45.0% |
| !! | TAAAAGGGGGTACTGGATGT+TGG | + | chr6.2:1214651-1214670 | None:intergenic | 45.0% |
| !!! | ATATATATCAAATTTTTTTA+TGG | - | chr6.2:1214171-1214190 | MS.gene053035:intron | 5.0% |
| ACACAAGCATGTCCTGAACC+AGG | - | chr6.2:1215614-1215633 | MS.gene053035:intron | 50.0% | |
| ACACAGATCCTCACTGCTTC+TGG | - | chr6.2:1214435-1214454 | MS.gene053035:intron | 50.0% | |
| AGCATGTCCTGAACCAGGAA+AGG | - | chr6.2:1215619-1215638 | MS.gene053035:intron | 50.0% | |
| AGCTTGTCCCAAGATGACAG+TGG | - | chr6.2:1215935-1215954 | MS.gene053035:intron | 50.0% | |
| AGTTTCCATAGCCACTGCTG+GGG | - | chr6.2:1215442-1215461 | MS.gene053035:intron | 50.0% | |
| ATCAAGGACTACGACCAAGG+AGG | - | chr6.2:1215294-1215313 | MS.gene053035:intron | 50.0% | |
| CAAGTTTCCATAGCCACTGC+TGG | - | chr6.2:1215440-1215459 | MS.gene053035:intron | 50.0% | |
| CACTGACACGTGATGCTACT+TGG | - | chr6.2:1213934-1213953 | MS.gene053035:intron | 50.0% | |
| CGCGAGCTCAATTCCTTTCA+AGG | - | chr6.2:1213418-1213437 | MS.gene053035:CDS | 50.0% | |
| GCAACAGTCCACTGTCATCT+TGG | + | chr6.2:1215946-1215965 | None:intergenic | 50.0% | |
| TCAAGGACTACGACCAAGGA+GGG | - | chr6.2:1215295-1215314 | MS.gene053035:intron | 50.0% | |
| TGCTGGGGCAGTAAATAGGT+TGG | - | chr6.2:1215457-1215476 | MS.gene053035:intron | 50.0% | |
| ! | AAAGCTGGTTCTTGTGGCTG+TGG | + | chr6.2:1216921-1216940 | None:intergenic | 50.0% |
| ! | ATTGGAGTGGCTGACTTCAC+TGG | + | chr6.2:1216868-1216887 | None:intergenic | 50.0% |
| ! | GTTGCTTTCTGCTTCCTGCA+TGG | - | chr6.2:1215961-1215980 | MS.gene053035:intron | 50.0% |
| ! | TTGGAGTGGCTGACTTCACT+GGG | + | chr6.2:1216867-1216886 | None:intergenic | 50.0% |
| !! | TCAGGTTGACAAGCCTCAAG+TGG | - | chr6.2:1216412-1216431 | MS.gene053035:intron | 50.0% |
| CAACTTACCTTGCCCCTCCT+TGG | + | chr6.2:1215311-1215330 | None:intergenic | 55.0% | |
| CAAGGACTACGACCAAGGAG+GGG | - | chr6.2:1215296-1215315 | MS.gene053035:intron | 55.0% | |
| CCACTGCTGGGGCAGTAAAT+AGG | - | chr6.2:1215453-1215472 | MS.gene053035:intron | 55.0% | |
| CCTATTTACTGCCCCAGCAG+TGG | + | chr6.2:1215456-1215475 | None:intergenic | 55.0% | |
| CTGCTTCCTGCATGGATAGC+CGG | - | chr6.2:1215969-1215988 | MS.gene053035:intron | 55.0% | |
| GGCCATAACCCTTCTTCGGA+TGG | + | chr6.2:1216749-1216768 | None:intergenic | 55.0% | |
| GGGCTCTTCAAAGCAGACTC+TGG | + | chr6.2:1216982-1217001 | None:intergenic | 55.0% | |
| TGAGCTCGCGTGAAGTTGTG+AGG | + | chr6.2:1213408-1213427 | None:intergenic | 55.0% | |
| ! | AGGATACCGGCTATCCATGC+AGG | + | chr6.2:1215978-1215997 | None:intergenic | 55.0% |
| ! | GCTGACTTCACTGGGTCATG+TGG | + | chr6.2:1216859-1216878 | None:intergenic | 55.0% |
| ! | GGAGTGTTAACAGGGCACAC+AGG | - | chr6.2:1214879-1214898 | MS.gene053035:intron | 55.0% |
| ! | GTTCTCTTTAGGGAAGGCGG+TGG | + | chr6.2:1217021-1217040 | None:intergenic | 55.0% |
| ACTACGACCAAGGAGGGGCA+AGG | - | chr6.2:1215301-1215320 | MS.gene053035:intron | 60.0% | |
| GGAGGGGCAAGGTAAGTTGC+TGG | - | chr6.2:1215312-1215331 | MS.gene053035:CDS | 60.0% | |
| GGGGCAAGGTAAGTTGCTGG+TGG | - | chr6.2:1215315-1215334 | MS.gene053035:CDS | 60.0% | |
| TACTGCCCCAGCAGTGGCTA+TGG | + | chr6.2:1215450-1215469 | None:intergenic | 60.0% | |
| !! | TGCAGGTGCCGGTCTGACAA+TGG | - | chr6.2:1216552-1216571 | MS.gene053035:intron | 60.0% |
| CATCGGGGCTAATCGCAGCC+TGG | + | chr6.2:1216257-1216276 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 1213373 | 1217071 | 1213373 | ID=MS.gene053035 |
| chr6.2 | mRNA | 1213373 | 1217071 | 1213373 | ID=MS.gene053035.t1;Parent=MS.gene053035 |
| chr6.2 | exon | 1217005 | 1217071 | 1217005 | ID=MS.gene053035.t1.exon1;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1217005 | 1217071 | 1217005 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1216793 | 1216905 | 1216793 | ID=MS.gene053035.t1.exon2;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1216793 | 1216905 | 1216793 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1216582 | 1216690 | 1216582 | ID=MS.gene053035.t1.exon3;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1216582 | 1216690 | 1216582 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1216145 | 1216209 | 1216145 | ID=MS.gene053035.t1.exon4;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1216145 | 1216209 | 1216145 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1215977 | 1216015 | 1215977 | ID=MS.gene053035.t1.exon5;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1215977 | 1216015 | 1215977 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1215505 | 1215601 | 1215505 | ID=MS.gene053035.t1.exon6;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1215505 | 1215601 | 1215505 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1215306 | 1215399 | 1215306 | ID=MS.gene053035.t1.exon7;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1215306 | 1215399 | 1215306 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1215122 | 1215185 | 1215122 | ID=MS.gene053035.t1.exon8;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1215122 | 1215185 | 1215122 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1214970 | 1215046 | 1214970 | ID=MS.gene053035.t1.exon9;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1214970 | 1215046 | 1214970 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1214804 | 1214873 | 1214804 | ID=MS.gene053035.t1.exon10;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1214804 | 1214873 | 1214804 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1214454 | 1214530 | 1214454 | ID=MS.gene053035.t1.exon11;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1214454 | 1214530 | 1214454 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1214277 | 1214361 | 1214277 | ID=MS.gene053035.t1.exon12;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1214277 | 1214361 | 1214277 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1214118 | 1214186 | 1214118 | ID=MS.gene053035.t1.exon13;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1214118 | 1214186 | 1214118 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1213961 | 1214028 | 1213961 | ID=MS.gene053035.t1.exon14;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1213961 | 1214028 | 1213961 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1213839 | 1213887 | 1213839 | ID=MS.gene053035.t1.exon15;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1213839 | 1213887 | 1213839 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| chr6.2 | exon | 1213373 | 1213750 | 1213373 | ID=MS.gene053035.t1.exon16;Parent=MS.gene053035.t1 |
| chr6.2 | CDS | 1213373 | 1213750 | 1213373 | ID=cds.MS.gene053035.t1;Parent=MS.gene053035.t1 |
| Gene Sequence |
| Protein sequence |
