Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053170.t1 | XP_013454559.1 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.00E+00 | 1104.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053170.t1 | Q8LPJ4 | 82.9 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 1.2e-295 | 1016.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053170.t1 | A0A072URT6 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0e+00 | 1104.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053170 | MS.gene054555 | 0.953506 | 2.36E-111 | -1.69E-46 |
| MS.gene053170 | MS.gene65434 | 0.929827 | 3.97E-93 | -1.69E-46 |
| MS.gene053170 | MS.gene74655 | -0.808407 | 3.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053170.t1 | MTR_4g007890 | 90.833 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1129 |
| MS.gene053170.t1 | MTR_1g114170 | 87.209 | 602 | 75 | 2 | 1 | 600 | 5 | 606 | 0.0 | 1088 |
| MS.gene053170.t1 | MTR_1g025075 | 84.884 | 602 | 89 | 2 | 1 | 600 | 6 | 607 | 0.0 | 1061 |
| MS.gene053170.t1 | MTR_1g025075 | 84.932 | 511 | 75 | 2 | 92 | 600 | 17 | 527 | 0.0 | 894 |
| MS.gene053170.t1 | MTR_1g024860 | 75.092 | 542 | 113 | 5 | 3 | 542 | 8 | 529 | 0.0 | 823 |
| MS.gene053170.t1 | MTR_1g024860 | 26.693 | 251 | 133 | 7 | 370 | 595 | 104 | 328 | 9.56e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053170.t1 | AT4G19210 | 82.862 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 0.0 | 1043 |
| MS.gene053170.t1 | AT3G13640 | 74.043 | 601 | 153 | 2 | 1 | 600 | 5 | 603 | 0.0 | 939 |
| MS.gene053170.t1 | AT4G30300 | 64.571 | 175 | 60 | 2 | 350 | 522 | 1 | 175 | 1.99e-66 | 215 |
| MS.gene053170.t1 | AT4G30300 | 25.140 | 179 | 100 | 5 | 100 | 265 | 21 | 178 | 1.78e-11 | 63.9 |
Find 140 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAGTTGGAGCCAAATT+TGG | 0.165233 | 4.2:+92037605 | MS.gene053170:CDS |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 4.2:+92038825 | MS.gene053170:CDS |
| TATCAACTTGCCGGAGAATT+TGG | 0.186930 | 4.2:+92037345 | MS.gene053170:CDS |
| GTCCACTGCCCTTAGAATTT+TGG | 0.194239 | 4.2:+92037581 | MS.gene053170:CDS |
| TCATATCTCTCTCATTGTTT+TGG | 0.229197 | 4.2:-92038758 | None:intergenic |
| CCTGAACTTGCCTTGAGTTT+TGG | 0.246863 | 4.2:-92039810 | None:intergenic |
| ACTTTCCAGCCAAAATTCTA+AGG | 0.272957 | 4.2:-92037590 | None:intergenic |
| CAACAGAAAATCTTAGGTTT+CGG | 0.282822 | 4.2:+92039260 | MS.gene053170:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 4.2:+92039254 | MS.gene053170:CDS |
| ACAGTGAAACGACCCAAATT+TGG | 0.292894 | 4.2:-92037618 | None:intergenic |
| GATGAATTCTTTCATGTAAC+AGG | 0.293045 | 4.2:-92040126 | None:intergenic |
| TCATCACATCTGATATAAAC+TGG | 0.305491 | 4.2:-92040165 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.307649 | 4.2:+92039261 | MS.gene053170:CDS |
| GACTTTATTTGCTGTTTGTA+TGG | 0.317741 | 4.2:+92039157 | MS.gene053170:CDS |
| GGTCATTGCTAAGGCATAAT+AGG | 0.365075 | 4.2:+92038970 | MS.gene053170:CDS |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.366567 | 4.2:-92037394 | None:intergenic |
| GAACCAAGTTTGTTGATCCT+TGG | 0.372441 | 4.2:-92041723 | None:intergenic |
| AACCAAGTTTGTTGATCCTT+GGG | 0.373348 | 4.2:-92041722 | None:intergenic |
| CTTTCGAGATGAGAGTTTGA+AGG | 0.373390 | 4.2:+92037805 | MS.gene053170:CDS |
| TAACAGTTGATTTGAACTTT+GGG | 0.374527 | 4.2:-92040099 | None:intergenic |
| CTAACAGTTGATTTGAACTT+TGG | 0.376761 | 4.2:-92040100 | None:intergenic |
| CGCCCAAGGATCAACAAACT+TGG | 0.378870 | 4.2:+92041720 | MS.gene053170:CDS |
| CGTTGCCCTGTCGTCATAAC+CGG | 0.380336 | 4.2:+92037005 | MS.gene053170:CDS |
| GATAGAGAGCAAAAGCTTGC+TGG | 0.383710 | 4.2:+92041753 | MS.gene053170:CDS |
| TGTAGTTGGAGGAGAATTTA+CGG | 0.386210 | 4.2:+92039838 | MS.gene053170:CDS |
| ATTGATCACATTCATAAAAC+GGG | 0.386877 | 4.2:+92038708 | MS.gene053170:CDS |
| AATTAAGATTATCAACTTGC+CGG | 0.388066 | 4.2:+92037336 | MS.gene053170:CDS |
| GGAAAGTTGGAGCCAAATTT+GGG | 0.390741 | 4.2:+92037606 | MS.gene053170:CDS |
| GTCAAAATTTCCTGCCAGTC+AGG | 0.392453 | 4.2:-92037743 | None:intergenic |
| TGCAGCAATAATACGCTGTT+CGG | 0.396922 | 4.2:-92041346 | None:intergenic |
| TGACAGAGTTATTGTTTATG+AGG | 0.398914 | 4.2:+92041452 | MS.gene053170:CDS |
| CAACAGCAATGGCAAACCTT+TGG | 0.402310 | 4.2:-92038857 | None:intergenic |
| TGCTGTTTGTATGGAACACC+TGG | 0.402893 | 4.2:+92039166 | MS.gene053170:CDS |
| TATGGAACACCTGGGGCATA+TGG | 0.411356 | 4.2:+92039175 | MS.gene053170:CDS |
| CCGAGGCCGGGGAAAGTGCT+TGG | 0.412378 | 4.2:+92037531 | MS.gene053170:CDS |
| ACTTTCCCCGGCCTCGGAAC+CGG | 0.412394 | 4.2:-92037525 | None:intergenic |
| GGGAAAGTGCTTGGTTTGGT+TGG | 0.414362 | 4.2:+92037540 | MS.gene053170:CDS |
| AGTTGTGTATTATAGGTTGC+CGG | 0.415419 | 4.2:+92037506 | MS.gene053170:intron |
| TATAATACAGGTTAGCTTCA+AGG | 0.416213 | 4.2:+92038677 | MS.gene053170:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.419970 | 4.2:-92041708 | None:intergenic |
| TGCAAAGAAAACAGCCTTTG+TGG | 0.420036 | 4.2:+92041395 | MS.gene053170:CDS |
| CCAAAACTCAAGGCAAGTTC+AGG | 0.420940 | 4.2:+92039810 | MS.gene053170:CDS |
| AGGTTGCCGGTTCCGAGGCC+GGG | 0.422004 | 4.2:+92037519 | MS.gene053170:intron |
| GCCGGGGAAAGTGCTTGGTT+TGG | 0.422861 | 4.2:+92037536 | MS.gene053170:CDS |
| GGAATTAATATCTTCTTGTC+TGG | 0.423856 | 4.2:+92039229 | MS.gene053170:CDS |
| ATAATCTTAATTGCTTCAAA+AGG | 0.425895 | 4.2:-92037325 | None:intergenic |
| GGAAAGTGCTTGGTTTGGTT+GGG | 0.426497 | 4.2:+92037541 | MS.gene053170:CDS |
| TATTGATCACATTCATAAAA+CGG | 0.431274 | 4.2:+92038707 | MS.gene053170:CDS |
| GTTTCCTTATGTCTTTGTCT+TGG | 0.432752 | 4.2:+92040256 | MS.gene053170:CDS |
| GGATGACTCTCTTACCTTCA+AGG | 0.434243 | 4.2:+92039282 | MS.gene053170:CDS |
| TAGGTTGCCGGTTCCGAGGC+CGG | 0.434876 | 4.2:+92037518 | MS.gene053170:intron |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 4.2:-92039211 | None:intergenic |
| ATAGATTATTTATACCTTGA+AGG | 0.440136 | 4.2:-92039296 | None:intergenic |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 4.2:+92038826 | MS.gene053170:CDS |
| TCTCCACAATCACTGCTGAC+TGG | 0.442692 | 4.2:+92041504 | MS.gene053170:CDS |
| TCTCAGATTGTTGTTATGCT+TGG | 0.451315 | 4.2:+92039863 | MS.gene053170:CDS |
| GTTGTTATGCTTGGTGAGAA+TGG | 0.453138 | 4.2:+92039872 | MS.gene053170:CDS |
| TGAACACGATCTTAGTGTCT+TGG | 0.458360 | 4.2:+92039123 | MS.gene053170:CDS |
| CTTATGTCTTTGTCTTGGAA+AGG | 0.458540 | 4.2:+92040261 | MS.gene053170:CDS |
| TGGATGTGGTATTTGTGTTA+AGG | 0.458616 | 4.2:+92037193 | MS.gene053170:CDS |
| AAAGACACCACTCATAGATA+TGG | 0.460544 | 4.2:+92037370 | MS.gene053170:CDS |
| GTTTGCAGAACCCTCCTGAC+TGG | 0.466184 | 4.2:+92037729 | MS.gene053170:intron |
| CTCCACAATCACTGCTGACT+GGG | 0.473425 | 4.2:+92041505 | MS.gene053170:CDS |
| GCAGAACCCTCCTGACTGGC+AGG | 0.473883 | 4.2:+92037733 | MS.gene053170:intron |
| ACGCGTATTGCCATTGTCAA+TGG | 0.480880 | 4.2:+92036939 | MS.gene053170:CDS |
| CTCACATCAAGATAACTAGA+AGG | 0.483153 | 4.2:-92038918 | None:intergenic |
| TTTGCAGTACAGTCAATTGA+AGG | 0.483786 | 4.2:-92041480 | None:intergenic |
| AACTTTGGGTTAATTGTCTG+AGG | 0.488966 | 4.2:-92040085 | None:intergenic |
| ACCAAACCAAGCACTTTCCC+CGG | 0.489846 | 4.2:-92037537 | None:intergenic |
| ATCATACCGGTTATGACGAC+AGG | 0.490261 | 4.2:-92037011 | None:intergenic |
| TGAAAGCTGCCCAAGTTGTC+CGG | 0.491384 | 4.2:+92038949 | MS.gene053170:CDS |
| GTGTCTTTGTCCAAATTCTC+CGG | 0.498181 | 4.2:-92037355 | None:intergenic |
| TATAGGAAGATTGTGTATTG+AGG | 0.500669 | 4.2:+92037124 | MS.gene053170:intron |
| TTGTTATGCTTGGTGAGAAT+GGG | 0.504018 | 4.2:+92039873 | MS.gene053170:CDS |
| AAGTTCAGGCTTCGTGTAGT+TGG | 0.505597 | 4.2:+92039824 | MS.gene053170:CDS |
| GGTTGCCGGTTCCGAGGCCG+GGG | 0.505721 | 4.2:+92037520 | MS.gene053170:intron |
| AAACAATGAGAGAGATATGA+AGG | 0.508578 | 4.2:+92038761 | MS.gene053170:CDS |
| CACATTCATAAAACGGGGCA+AGG | 0.508774 | 4.2:+92038714 | MS.gene053170:CDS |
| TAACACATACTGATAAGAAA+AGG | 0.514344 | 4.2:-92041533 | None:intergenic |
| GACAACATTCATCCGTATGC+TGG | 0.519437 | 4.2:+92039904 | MS.gene053170:CDS |
| TTCAGGCTTCGTGTAGTTGG+AGG | 0.519982 | 4.2:+92039827 | MS.gene053170:CDS |
| TAAAACGGGGCAAGGGAACG+TGG | 0.521293 | 4.2:+92038722 | MS.gene053170:CDS |
| TCAGATCCACCTATAGTGTC+AGG | 0.525068 | 4.2:-92040028 | None:intergenic |
| AGCCAAAATTCTAAGGGCAG+TGG | 0.528739 | 4.2:-92037583 | None:intergenic |
| ATAGAGAGCAAAAGCTTGCT+GGG | 0.529331 | 4.2:+92041754 | MS.gene053170:CDS |
| TCTATCAGATAAATGTCTGC+AGG | 0.531946 | 4.2:-92041300 | None:intergenic |
| CTTTCCAAGACAAAGACATA+AGG | 0.539595 | 4.2:-92040260 | None:intergenic |
| TTAGCAATGACCGGACAACT+TGG | 0.539932 | 4.2:-92038959 | None:intergenic |
| TCATTGAAACCTGACACTAT+AGG | 0.540340 | 4.2:+92040019 | MS.gene053170:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 4.2:+92038813 | MS.gene053170:CDS |
| GACAGAGTTATTGTTTATGA+GGG | 0.542830 | 4.2:+92041453 | MS.gene053170:CDS |
| CATCACATCTGATATAAACT+GGG | 0.543431 | 4.2:-92040164 | None:intergenic |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 4.2:+92039208 | MS.gene053170:CDS |
| CCAAGCACTTTCCCCGGCCT+CGG | 0.544800 | 4.2:-92037531 | None:intergenic |
| ACATCCAGTGCACAATTCCT+CGG | 0.548548 | 4.2:-92037177 | None:intergenic |
| ATCCCAGTCAGCAGTGATTG+TGG | 0.548844 | 4.2:-92041507 | None:intergenic |
| ACTACTTATCGAACAGCTGA+TGG | 0.549716 | 4.2:+92040192 | MS.gene053170:CDS |
| AAACCTGAACTTAGTCATCA+AGG | 0.550955 | 4.2:-92041788 | None:intergenic |
| AAAACGGGGCAAGGGAACGT+GGG | 0.554809 | 4.2:+92038723 | MS.gene053170:CDS |
| TTGCTGCAAAAGTTATCAAG+AGG | 0.559789 | 4.2:+92041361 | MS.gene053170:CDS |
| CTATCCGAGGAATTGTGCAC+TGG | 0.564876 | 4.2:+92037173 | MS.gene053170:CDS |
| CTTTCCAGCCAAAATTCTAA+GGG | 0.572535 | 4.2:-92037589 | None:intergenic |
| ATCCAACTAATTTCCGCCCA+AGG | 0.577928 | 4.2:+92041706 | MS.gene053170:CDS |
| CACTATAGGTGGATCTGATG+TGG | 0.580575 | 4.2:+92040033 | MS.gene053170:CDS |
| AAGTTGTCCGGTCATTGCTA+AGG | 0.581006 | 4.2:+92038961 | MS.gene053170:CDS |
| TATTATGCCTTAGCAATGAC+CGG | 0.582030 | 4.2:-92038968 | None:intergenic |
| CAGTGCACAATTCCTCGGAT+AGG | 0.583504 | 4.2:-92037172 | None:intergenic |
| TTGTGTGAAATATTGAACTC+AGG | 0.583680 | 4.2:-92040061 | None:intergenic |
| AAAATTTCCTGCCAGTCAGG+AGG | 0.583757 | 4.2:-92037740 | None:intergenic |
| TCGGAATCAAGATGTGCACT+TGG | 0.586777 | 4.2:-92041327 | None:intergenic |
| TAGCAATGACCGGACAACTT+GGG | 0.588276 | 4.2:-92038958 | None:intergenic |
| ACTAAAAGAATACCAGCATA+CGG | 0.589186 | 4.2:-92039916 | None:intergenic |
| ATCAGCTGTTCGATAAGTAG+TGG | 0.593241 | 4.2:-92040190 | None:intergenic |
| GAGGAATTGTGCACTGGATG+TGG | 0.596595 | 4.2:+92037179 | MS.gene053170:CDS |
| TAGGAGGGCAGCAACAGCAA+TGG | 0.601333 | 4.2:-92038868 | None:intergenic |
| AAATTTCCTGCCAGTCAGGA+GGG | 0.605918 | 4.2:-92037739 | None:intergenic |
| ATTATAGGTTGCCGGTTCCG+AGG | 0.606131 | 4.2:+92037514 | MS.gene053170:intron |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 4.2:-92041719 | None:intergenic |
| ATGCTTGGTGAGAATGGGAC+GGG | 0.610087 | 4.2:+92039878 | MS.gene053170:CDS |
| GTTACGACTCCATATGCCCC+AGG | 0.611493 | 4.2:-92039184 | None:intergenic |
| TGAGCTTCAGCAGTTTCATG+CGG | 0.615253 | 4.2:-92039755 | None:intergenic |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 4.2:+92038827 | MS.gene053170:CDS |
| GGTTGAGCATGATTTCATCA+TGG | 0.619459 | 4.2:+92041416 | MS.gene053170:CDS |
| AAACGGGGCAAGGGAACGTG+GGG | 0.627128 | 4.2:+92038724 | MS.gene053170:CDS |
| GCATCTGTCTCCATTGACAA+TGG | 0.633618 | 4.2:-92036949 | None:intergenic |
| ACATTCATAAAACGGGGCAA+GGG | 0.634571 | 4.2:+92038715 | MS.gene053170:CDS |
| CTGTTTGTATGGAACACCTG+GGG | 0.643438 | 4.2:+92039168 | MS.gene053170:CDS |
| TTGAAACCTGACACTATAGG+TGG | 0.643934 | 4.2:+92040022 | MS.gene053170:CDS |
| GAAATCATGCTCAACCACAA+AGG | 0.644019 | 4.2:-92041409 | None:intergenic |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 4.2:+92038828 | MS.gene053170:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.658017 | 4.2:+92039800 | MS.gene053170:CDS |
| GAAGATTGCTTACCTATCCG+AGG | 0.658534 | 4.2:+92037160 | MS.gene053170:CDS |
| ATTAGGACCATATCTATGAG+TGG | 0.668366 | 4.2:-92037377 | None:intergenic |
| CAACAAACTTGGTTCAACCA+AGG | 0.671800 | 4.2:+92041731 | MS.gene053170:CDS |
| GTTATCTTGATGTGAGACAG+AGG | 0.675184 | 4.2:+92038925 | MS.gene053170:CDS |
| GCTGTTTGTATGGAACACCT+GGG | 0.679841 | 4.2:+92039167 | MS.gene053170:CDS |
| TATGCTTGGTGAGAATGGGA+CGG | 0.683302 | 4.2:+92039877 | MS.gene053170:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.688133 | 4.2:-92040163 | None:intergenic |
| TCATACCGGTTATGACGACA+GGG | 0.697152 | 4.2:-92037010 | None:intergenic |
| TTGATCACATTCATAAAACG+GGG | 0.709656 | 4.2:+92038709 | MS.gene053170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACATAATAATTGATAAA+TGG | - | chr4.2:92037988-92038007 | None:intergenic | 10.0% |
| !! | ATTTATCAATTATTATGTAA+TGG | + | chr4.2:92037987-92038006 | MS.gene053170:intron | 10.0% |
| !! | GAATTCAATTAATATTTATA+TGG | - | chr4.2:92041087-92041106 | None:intergenic | 10.0% |
| !! | TATTCTTATAAATTAGATAT+TGG | + | chr4.2:92039631-92039650 | MS.gene053170:intron | 10.0% |
| !! | TTGTAAAAAAAAAAAATTAC+TGG | - | chr4.2:92037937-92037956 | None:intergenic | 10.0% |
| !!! | AAAATGTTTTTCAAAATTAA+AGG | - | chr4.2:92038493-92038512 | None:intergenic | 10.0% |
| !! | CGGTATAAAAAAAAAAAAAA+AGG | - | chr4.2:92037659-92037678 | None:intergenic | 15.0% |
| !! | TACAAAACGATATTAAATAA+AGG | - | chr4.2:92037843-92037862 | None:intergenic | 15.0% |
| !! | TCAAATGAAAATATTGATAA+TGG | + | chr4.2:92040895-92040914 | MS.gene053170:intron | 15.0% |
| !! | TTCAATATATGTTATAATAC+AGG | + | chr4.2:92038665-92038684 | MS.gene053170:intron | 15.0% |
| !!! | AAAAAAAAAAAGGCTAATTT+TGG | - | chr4.2:92037649-92037668 | None:intergenic | 15.0% |
| !!! | AAAAGTTCTAACAAAATATA+AGG | - | chr4.2:92039572-92039591 | None:intergenic | 15.0% |
| !!! | ATAAGAATATTTTCATTTTG+AGG | - | chr4.2:92039620-92039639 | None:intergenic | 15.0% |
| !!! | CAAATGAAAATATTGATAAT+GGG | + | chr4.2:92040896-92040915 | MS.gene053170:intron | 15.0% |
| !!! | GTTTTTCTGATTTTTTTTAT+TGG | + | chr4.2:92037961-92037980 | MS.gene053170:intron | 15.0% |
| !!! | TATGTGTTATTATTTTTCAA+TGG | + | chr4.2:92041547-92041566 | MS.gene053170:intron | 15.0% |
| !!! | TCATATTTTAACAAAAAGAT+AGG | - | chr4.2:92040648-92040667 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAATATGAT+TGG | + | chr4.2:92040649-92040668 | MS.gene053170:intron | 15.0% |
| !!! | TGAAATTTTATGTTAATGTT+TGG | + | chr4.2:92037058-92037077 | MS.gene053170:intron | 15.0% |
| !!! | TGATTTTTTATGATTTGTTA+TGG | + | chr4.2:92040487-92040506 | MS.gene053170:intron | 15.0% |
| !!! | TTTTTATTCAAATAAACTCA+TGG | + | chr4.2:92039490-92039509 | MS.gene053170:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTATACCG+TGG | + | chr4.2:92037659-92037678 | MS.gene053170:intron | 15.0% |
| !! | AGAATTTCTTTAATTGAGAA+GGG | + | chr4.2:92038037-92038056 | MS.gene053170:intron | 20.0% |
| !! | ATAATCTTAATTGCTTCAAA+AGG | - | chr4.2:92037328-92037347 | None:intergenic | 20.0% |
| !! | ATAGATTATTTATACCTTGA+AGG | - | chr4.2:92039299-92039318 | None:intergenic | 20.0% |
| !! | TAGAATTTCTTTAATTGAGA+AGG | + | chr4.2:92038036-92038055 | MS.gene053170:intron | 20.0% |
| !! | TATTGATCACATTCATAAAA+CGG | + | chr4.2:92038707-92038726 | MS.gene053170:CDS | 20.0% |
| !! | TTTGTTAAAATATGATTGGA+TGG | + | chr4.2:92040653-92040672 | MS.gene053170:intron | 20.0% |
| !!! | AGGAAATTTTGACTTATTAT+CGG | + | chr4.2:92037753-92037772 | MS.gene053170:CDS | 20.0% |
| !!! | ATGTTTATTTCTACATTACA+AGG | - | chr4.2:92038378-92038397 | None:intergenic | 20.0% |
| !!! | ATTCAGAAACCAAATATTTT+CGG | - | chr4.2:92039467-92039486 | None:intergenic | 20.0% |
| !!! | CATATTAACACAGAATTTTT+AGG | - | chr4.2:92037442-92037461 | None:intergenic | 20.0% |
| !!! | CTATTTCGTTTGAAATAAAT+AGG | - | chr4.2:92041236-92041255 | None:intergenic | 20.0% |
| !!! | TATCTTATTGATTTAGACTT+TGG | + | chr4.2:92037875-92037894 | MS.gene053170:intron | 20.0% |
| !!! | TTGTTAGAACTTTTAGATAT+TGG | + | chr4.2:92039578-92039597 | MS.gene053170:intron | 20.0% |
| ! | AAATTCAGATTTATCTTGAC+TGG | - | chr4.2:92039067-92039086 | None:intergenic | 25.0% |
| ! | AAGAAATTCTACAACACTAT+AGG | - | chr4.2:92038027-92038046 | None:intergenic | 25.0% |
| ! | AATTAAGATTATCAACTTGC+CGG | + | chr4.2:92037336-92037355 | MS.gene053170:CDS | 25.0% |
| ! | AGCTATTCAAGAATGTAAAA+AGG | - | chr4.2:92040365-92040384 | None:intergenic | 25.0% |
| ! | ATGATTATGCGTGTAATTAT+AGG | + | chr4.2:92037107-92037126 | MS.gene053170:intron | 25.0% |
| ! | ATGGAATATAAAGCCAATTT+GGG | + | chr4.2:92039335-92039354 | MS.gene053170:intron | 25.0% |
| ! | ATTGAATTCCTTATCCATTA+CGG | + | chr4.2:92041098-92041117 | MS.gene053170:intron | 25.0% |
| ! | ATTGATCACATTCATAAAAC+GGG | + | chr4.2:92038708-92038727 | MS.gene053170:CDS | 25.0% |
| ! | CAATTATTATGTAATGGTAG+AGG | + | chr4.2:92037993-92038012 | MS.gene053170:intron | 25.0% |
| ! | TAAAAAGGAAAGAAAAAGCA+GGG | - | chr4.2:92040350-92040369 | None:intergenic | 25.0% |
| ! | TAACACATACTGATAAGAAA+AGG | - | chr4.2:92041536-92041555 | None:intergenic | 25.0% |
| ! | TATCTATCTATCTATCTATG+CGG | - | chr4.2:92038259-92038278 | None:intergenic | 25.0% |
| ! | TATGGAATATAAAGCCAATT+TGG | + | chr4.2:92039334-92039353 | MS.gene053170:intron | 25.0% |
| ! | TGCACATTCAGAAAAATATA+AGG | - | chr4.2:92038547-92038566 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | + | chr4.2:92040961-92040980 | MS.gene053170:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | + | chr4.2:92040962-92040981 | MS.gene053170:intron | 25.0% |
| !! | AAAAAGATAGGCCATATTTT+TGG | - | chr4.2:92040636-92040655 | None:intergenic | 25.0% |
| !! | AAAAGATAGGCCATATTTTT+GGG | - | chr4.2:92040635-92040654 | None:intergenic | 25.0% |
| !! | ACTTTTCTCAATTCTATTGT+TGG | - | chr4.2:92039440-92039459 | None:intergenic | 25.0% |
| !! | TAGATAGATAATCTTTGAAG+AGG | + | chr4.2:92038273-92038292 | MS.gene053170:intron | 25.0% |
| !!! | AAAGAAGTTTTGAATCTTTC+TGG | + | chr4.2:92040217-92040236 | MS.gene053170:CDS | 25.0% |
| !!! | ATTTTTAGAACTATACCTCT+TGG | + | chr4.2:92041171-92041190 | MS.gene053170:intron | 25.0% |
| !!! | GAAATTTTGACTTATTATCG+GGG | + | chr4.2:92037755-92037774 | MS.gene053170:CDS | 25.0% |
| !!! | GGAAATTTTGACTTATTATC+GGG | + | chr4.2:92037754-92037773 | MS.gene053170:CDS | 25.0% |
| !!! | TAACAGTTGATTTGAACTTT+GGG | - | chr4.2:92040102-92040121 | None:intergenic | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | + | chr4.2:92040598-92040617 | MS.gene053170:intron | 25.0% |
| !!! | TGGCTTTATATTCCATAAAT+GGG | - | chr4.2:92039331-92039350 | None:intergenic | 25.0% |
| !!! | TTGGCTTTATATTCCATAAA+TGG | - | chr4.2:92039332-92039351 | None:intergenic | 25.0% |
| AAAAGCGATACACTAATTCA+TGG | + | chr4.2:92038146-92038165 | MS.gene053170:intron | 30.0% | |
| AAACAATGAGAGAGATATGA+AGG | + | chr4.2:92038761-92038780 | MS.gene053170:CDS | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | + | chr4.2:92039261-92039280 | MS.gene053170:CDS | 30.0% | |
| AATGAACCAACCTGAATAAA+AGG | - | chr4.2:92040004-92040023 | None:intergenic | 30.0% | |
| ACTAAAAGAATACCAGCATA+CGG | - | chr4.2:92039919-92039938 | None:intergenic | 30.0% | |
| AGTACTGCAGTAATACAAAT+TGG | + | chr4.2:92038348-92038367 | MS.gene053170:intron | 30.0% | |
| ATATAAGGACAACAAATGCT+AGG | - | chr4.2:92038532-92038551 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | - | chr4.2:92040166-92040185 | None:intergenic | 30.0% | |
| ATGTTGACGTTTCATTAACT+GGG | + | chr4.2:92038082-92038101 | MS.gene053170:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | + | chr4.2:92039260-92039279 | MS.gene053170:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | + | chr4.2:92038813-92038832 | MS.gene053170:CDS | 30.0% | |
| CATCACATCTGATATAAACT+GGG | - | chr4.2:92040167-92040186 | None:intergenic | 30.0% | |
| CCGGTTAAAATTGTCTATAT+CGG | + | chr4.2:92040521-92040540 | MS.gene053170:intron | 30.0% | |
| CTTTATATTCCATAAATGGG+AGG | - | chr4.2:92039328-92039347 | None:intergenic | 30.0% | |
| GACAGAGTTATTGTTTATGA+GGG | + | chr4.2:92041453-92041472 | MS.gene053170:CDS | 30.0% | |
| GATGAATTCTTTCATGTAAC+AGG | - | chr4.2:92040129-92040148 | None:intergenic | 30.0% | |
| GGAATTAATATCTTCTTGTC+TGG | + | chr4.2:92039229-92039248 | MS.gene053170:CDS | 30.0% | |
| GTAAAAAGGAAAGAAAAAGC+AGG | - | chr4.2:92040351-92040370 | None:intergenic | 30.0% | |
| TAAGCACATTAGAAACCAAA+AGG | - | chr4.2:92038644-92038663 | None:intergenic | 30.0% | |
| TATAAATGATGCATCGCAAA+AGG | - | chr4.2:92039525-92039544 | None:intergenic | 30.0% | |
| TATAGGAAGATTGTGTATTG+AGG | + | chr4.2:92037124-92037143 | MS.gene053170:intron | 30.0% | |
| TCAAGAGAGTTGTGTATTAT+AGG | + | chr4.2:92037499-92037518 | MS.gene053170:intron | 30.0% | |
| TCAATCAATCTCAGTATTGT+AGG | - | chr4.2:92039397-92039416 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | - | chr4.2:92040168-92040187 | None:intergenic | 30.0% | |
| TGACAGAGTTATTGTTTATG+AGG | + | chr4.2:92041452-92041471 | MS.gene053170:CDS | 30.0% | |
| TTCAACAACAATTACATAGC+TGG | - | chr4.2:92039107-92039126 | None:intergenic | 30.0% | |
| TTGATCACATTCATAAAACG+GGG | + | chr4.2:92038709-92038728 | MS.gene053170:CDS | 30.0% | |
| TTGTGTGAAATATTGAACTC+AGG | - | chr4.2:92040064-92040083 | None:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | + | chr4.2:92039254-92039273 | MS.gene053170:CDS | 30.0% | |
| TTTATCTTGACTGGAAATCA+AGG | - | chr4.2:92039058-92039077 | None:intergenic | 30.0% | |
| ! | AAAAAAACCCGAGTGTATTT+TGG | + | chr4.2:92040583-92040602 | MS.gene053170:intron | 30.0% |
| ! | AAAAAACCCGAGTGTATTTT+GGG | + | chr4.2:92040584-92040603 | MS.gene053170:intron | 30.0% |
| ! | AAAATTATGTTTTGCTCTCG+TGG | + | chr4.2:92041617-92041636 | MS.gene053170:intron | 30.0% |
| ! | AAAGTAGTGCCGAAAATATT+TGG | + | chr4.2:92039455-92039474 | MS.gene053170:intron | 30.0% |
| ! | ACATGTATATCTCAGCTTTT+AGG | - | chr4.2:92038890-92038909 | None:intergenic | 30.0% |
| ! | ACTGCAGTACTTTTATGATA+TGG | - | chr4.2:92038339-92038358 | None:intergenic | 30.0% |
| ! | ATAGATAATCTTTGAAGAGG+TGG | + | chr4.2:92038276-92038295 | MS.gene053170:intron | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | + | chr4.2:92037395-92037414 | MS.gene053170:CDS | 30.0% |
| ! | CTACTTCCATGTCAATTTTT+CGG | + | chr4.2:92041030-92041049 | MS.gene053170:intron | 30.0% |
| ! | TAGATAATCTTTGAAGAGGT+GGG | + | chr4.2:92038277-92038296 | MS.gene053170:intron | 30.0% |
| ! | TCATATCTCTCTCATTGTTT+TGG | - | chr4.2:92038761-92038780 | None:intergenic | 30.0% |
| ! | TTAAGAAAGGTTCTTCCTTT+TGG | + | chr4.2:92038626-92038645 | MS.gene053170:intron | 30.0% |
| !! | ATTTGTGTTAAGGTATTGAG+AGG | + | chr4.2:92037203-92037222 | MS.gene053170:intron | 30.0% |
| !! | CCGATATAGACAATTTTAAC+CGG | - | chr4.2:92040524-92040543 | None:intergenic | 30.0% |
| !! | CTAACAGTTGATTTGAACTT+TGG | - | chr4.2:92040103-92040122 | None:intergenic | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | - | chr4.2:92037397-92037416 | None:intergenic | 30.0% |
| !! | CTTATTGATTTAGACTTTGG+TGG | + | chr4.2:92037878-92037897 | MS.gene053170:intron | 30.0% |
| !! | GACTTTATTTGCTGTTTGTA+TGG | + | chr4.2:92039157-92039176 | MS.gene053170:CDS | 30.0% |
| !! | TATAATACAGGTTAGCTTCA+AGG | + | chr4.2:92038677-92038696 | MS.gene053170:intron | 30.0% |
| !! | TGAAAATATTGATAATGGGC+CGG | + | chr4.2:92040900-92040919 | MS.gene053170:intron | 30.0% |
| !!! | CTTTTTTATATGGGCCAAAT+GGG | + | chr4.2:92040551-92040570 | MS.gene053170:intron | 30.0% |
| !!! | TTTTTTTTTATACCGTGGAG+TGG | + | chr4.2:92037664-92037683 | MS.gene053170:intron | 30.0% |
| AAACTAGCCCAAAATACACT+CGG | - | chr4.2:92040594-92040613 | None:intergenic | 35.0% | |
| AAAGACACCACTCATAGATA+TGG | + | chr4.2:92037370-92037389 | MS.gene053170:CDS | 35.0% | |
| AACAAAACACCGAATCATAC+CGG | - | chr4.2:92037027-92037046 | None:intergenic | 35.0% | |
| ACTTTCCAGCCAAAATTCTA+AGG | - | chr4.2:92037593-92037612 | None:intergenic | 35.0% | |
| AGCAGTATCAAAGTTGAACT+CGG | - | chr4.2:92038311-92038330 | None:intergenic | 35.0% | |
| AGTTGTGTATTATAGGTTGC+CGG | + | chr4.2:92037506-92037525 | MS.gene053170:intron | 35.0% | |
| ATATTCCATAAATGGGAGGT+AGG | - | chr4.2:92039324-92039343 | None:intergenic | 35.0% | |
| ATGTTGACATTGACATTAGC+TGG | + | chr4.2:92038175-92038194 | MS.gene053170:intron | 35.0% | |
| ATTAGGACCATATCTATGAG+TGG | - | chr4.2:92037380-92037399 | None:intergenic | 35.0% | |
| CAATACTGAGATTGATTGAG+TGG | + | chr4.2:92039398-92039417 | MS.gene053170:intron | 35.0% | |
| CATGTTGACGTTTCATTAAC+TGG | + | chr4.2:92038081-92038100 | MS.gene053170:intron | 35.0% | |
| CCATTTGGCCCATATAAAAA+AGG | - | chr4.2:92040553-92040572 | None:intergenic | 35.0% | |
| CTAGACACAACATTAAAGCA+GGG | - | chr4.2:92039723-92039742 | None:intergenic | 35.0% | |
| CTCACATCAAGATAACTAGA+AGG | - | chr4.2:92038921-92038940 | None:intergenic | 35.0% | |
| CTTATGTCTTTGTCTTGGAA+AGG | + | chr4.2:92040261-92040280 | MS.gene053170:CDS | 35.0% | |
| CTTTCCAAGACAAAGACATA+AGG | - | chr4.2:92040263-92040282 | None:intergenic | 35.0% | |
| CTTTCCAGCCAAAATTCTAA+GGG | - | chr4.2:92037592-92037611 | None:intergenic | 35.0% | |
| GAAGTAGAGCTGTCAAAAAT+GGG | - | chr4.2:92041017-92041036 | None:intergenic | 35.0% | |
| GATAGTGTGACACTTAAGAA+AGG | + | chr4.2:92038613-92038632 | MS.gene053170:intron | 35.0% | |
| GTGTTTCCGAAAAATTGACA+TGG | - | chr4.2:92041039-92041058 | None:intergenic | 35.0% | |
| GTTTCCTTATGTCTTTGTCT+TGG | + | chr4.2:92040256-92040275 | MS.gene053170:CDS | 35.0% | |
| TAAAATTGTCTATATCGGCC+CGG | + | chr4.2:92040526-92040545 | MS.gene053170:intron | 35.0% | |
| TAGAGTGATGACAAGATCAA+GGG | + | chr4.2:92040444-92040463 | MS.gene053170:intron | 35.0% | |
| TATTATGCCTTAGCAATGAC+CGG | - | chr4.2:92038971-92038990 | None:intergenic | 35.0% | |
| TCATTGAAACCTGACACTAT+AGG | + | chr4.2:92040019-92040038 | MS.gene053170:CDS | 35.0% | |
| TCTATCAGATAAATGTCTGC+AGG | - | chr4.2:92041303-92041322 | None:intergenic | 35.0% | |
| TGGATGTGGTATTTGTGTTA+AGG | + | chr4.2:92037193-92037212 | MS.gene053170:CDS | 35.0% | |
| TGGTTGGGAAAAATGGAATT+GGG | + | chr4.2:92037556-92037575 | MS.gene053170:CDS | 35.0% | |
| TGTAGTTGGAGGAGAATTTA+CGG | + | chr4.2:92039838-92039857 | MS.gene053170:CDS | 35.0% | |
| TGTTGACATTGACATTAGCT+GGG | + | chr4.2:92038176-92038195 | MS.gene053170:intron | 35.0% | |
| TTAGAGTGATGACAAGATCA+AGG | + | chr4.2:92040443-92040462 | MS.gene053170:intron | 35.0% | |
| TTCATAGTTTCCTTTATGCC+AGG | + | chr4.2:92040384-92040403 | MS.gene053170:intron | 35.0% | |
| TTGCTGCAAAAGTTATCAAG+AGG | + | chr4.2:92041361-92041380 | MS.gene053170:CDS | 35.0% | |
| TTGGTTGGGAAAAATGGAAT+TGG | + | chr4.2:92037555-92037574 | MS.gene053170:CDS | 35.0% | |
| TTTAGGTAACCACAGCTAAA+AGG | - | chr4.2:92037425-92037444 | None:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | - | chr4.2:92041483-92041502 | None:intergenic | 35.0% | |
| ! | AACTTTGGGTTAATTGTCTG+AGG | - | chr4.2:92040088-92040107 | None:intergenic | 35.0% |
| ! | AGATAATCTTTGAAGAGGTG+GGG | + | chr4.2:92038278-92038297 | MS.gene053170:intron | 35.0% |
| ! | ATCTATTTGTGTTGACGTCA+TGG | + | chr4.2:92041144-92041163 | MS.gene053170:intron | 35.0% |
| ! | ATGATTTTGCGACGATAATC+TGG | + | chr4.2:92037259-92037278 | MS.gene053170:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | - | chr4.2:92039262-92039281 | None:intergenic | 35.0% |
| ! | GCAATCTTATGCAGTTTTCA+AGG | - | chr4.2:92040302-92040321 | None:intergenic | 35.0% |
| ! | TCTCAGATTGTTGTTATGCT+TGG | + | chr4.2:92039863-92039882 | MS.gene053170:CDS | 35.0% |
| ! | TGATTTTGCGACGATAATCT+GGG | + | chr4.2:92037260-92037279 | MS.gene053170:intron | 35.0% |
| ! | TGTATATCTCAGCTTTTAGG+AGG | - | chr4.2:92038887-92038906 | None:intergenic | 35.0% |
| ! | TTGTTATGCTTGGTGAGAAT+GGG | + | chr4.2:92039873-92039892 | MS.gene053170:CDS | 35.0% |
| !! | AACCAAGTTTGTTGATCCTT+GGG | - | chr4.2:92041725-92041744 | None:intergenic | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | + | chr4.2:92038826-92038845 | MS.gene053170:CDS | 35.0% |
| !! | GTATATCTCAGCTTTTAGGA+GGG | - | chr4.2:92038886-92038905 | None:intergenic | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | + | chr4.2:92038827-92038846 | MS.gene053170:CDS | 35.0% |
| !!! | CCTTTTTTATATGGGCCAAA+TGG | + | chr4.2:92040550-92040569 | MS.gene053170:intron | 35.0% |
| !!! | GAAGTTTTGAATCTTTCTGG+TGG | + | chr4.2:92040220-92040239 | MS.gene053170:CDS | 35.0% |
| !!! | TAGAATTTTGGCTGGAAAGT+TGG | + | chr4.2:92037593-92037612 | MS.gene053170:CDS | 35.0% |
| AACTAGCCCAAAATACACTC+GGG | - | chr4.2:92040593-92040612 | None:intergenic | 40.0% | |
| ACAGTGAAACGACCCAAATT+TGG | - | chr4.2:92037621-92037640 | None:intergenic | 40.0% | |
| ACATTCATAAAACGGGGCAA+GGG | + | chr4.2:92038715-92038734 | MS.gene053170:CDS | 40.0% | |
| ACTACTTATCGAACAGCTGA+TGG | + | chr4.2:92040192-92040211 | MS.gene053170:CDS | 40.0% | |
| AGATGCAAGCCAAAAAAGTG+TGG | + | chr4.2:92036966-92036985 | MS.gene053170:CDS | 40.0% | |
| ATCAGCTGTTCGATAAGTAG+TGG | - | chr4.2:92040193-92040212 | None:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | - | chr4.2:92039214-92039233 | None:intergenic | 40.0% | |
| CAACAAACTTGGTTCAACCA+AGG | + | chr4.2:92041731-92041750 | MS.gene053170:CDS | 40.0% | |
| CAACACAAATAGATGTCTGC+AGG | - | chr4.2:92041138-92041157 | None:intergenic | 40.0% | |
| CCTAGACACAACATTAAAGC+AGG | - | chr4.2:92039724-92039743 | None:intergenic | 40.0% | |
| CCTGCTTTAATGTTGTGTCT+AGG | + | chr4.2:92039721-92039740 | MS.gene053170:intron | 40.0% | |
| CTTTCGAGATGAGAGTTTGA+AGG | + | chr4.2:92037805-92037824 | MS.gene053170:CDS | 40.0% | |
| GAAATCATGCTCAACCACAA+AGG | - | chr4.2:92041412-92041431 | None:intergenic | 40.0% | |
| GAACCAACCTGAATAAAAGG+AGG | - | chr4.2:92040001-92040020 | None:intergenic | 40.0% | |
| GATTGGGATTTGTGAGTGTT+TGG | + | chr4.2:92038214-92038233 | MS.gene053170:intron | 40.0% | |
| GGAAAGTTGGAGCCAAATTT+GGG | + | chr4.2:92037606-92037625 | MS.gene053170:CDS | 40.0% | |
| GGAAGTAGAGCTGTCAAAAA+TGG | - | chr4.2:92041018-92041037 | None:intergenic | 40.0% | |
| GGTATGTTGTGGTTGTGATT+GGG | + | chr4.2:92038198-92038217 | MS.gene053170:intron | 40.0% | |
| GGTCATTGCTAAGGCATAAT+AGG | + | chr4.2:92038970-92038989 | MS.gene053170:CDS | 40.0% | |
| GGTTGAGCATGATTTCATCA+TGG | + | chr4.2:92041416-92041435 | MS.gene053170:CDS | 40.0% | |
| GTGTCTTTGTCCAAATTCTC+CGG | - | chr4.2:92037358-92037377 | None:intergenic | 40.0% | |
| GTTATCTTGATGTGAGACAG+AGG | + | chr4.2:92038925-92038944 | MS.gene053170:CDS | 40.0% | |
| GTTGACATTGACATTAGCTG+GGG | + | chr4.2:92038177-92038196 | MS.gene053170:intron | 40.0% | |
| TAAAAGACCAAACTTCGACC+TGG | - | chr4.2:92040405-92040424 | None:intergenic | 40.0% | |
| TATCAACTTGCCGGAGAATT+TGG | + | chr4.2:92037345-92037364 | MS.gene053170:CDS | 40.0% | |
| TATCTCCTACCTCCCATTTA+TGG | + | chr4.2:92039316-92039335 | MS.gene053170:intron | 40.0% | |
| TCGTCATAACCGGTATGATT+CGG | + | chr4.2:92037015-92037034 | MS.gene053170:intron | 40.0% | |
| TGAACACGATCTTAGTGTCT+TGG | + | chr4.2:92039123-92039142 | MS.gene053170:CDS | 40.0% | |
| TGCAAAGAAAACAGCCTTTG+TGG | + | chr4.2:92041395-92041414 | MS.gene053170:CDS | 40.0% | |
| TGCAGCAATAATACGCTGTT+CGG | - | chr4.2:92041349-92041368 | None:intergenic | 40.0% | |
| TGGAAAGTTGGAGCCAAATT+TGG | + | chr4.2:92037605-92037624 | MS.gene053170:CDS | 40.0% | |
| TGGCCCATATAAAAAAGGAC+CGG | - | chr4.2:92040548-92040567 | None:intergenic | 40.0% | |
| TGTTATGGATGTGCATCAAC+CGG | + | chr4.2:92040502-92040521 | MS.gene053170:intron | 40.0% | |
| TTGAAACCTGACACTATAGG+TGG | + | chr4.2:92040022-92040041 | MS.gene053170:CDS | 40.0% | |
| ! | AAGCTTTTGCTCTCTATCCT+TGG | - | chr4.2:92041751-92041770 | None:intergenic | 40.0% |
| ! | ATAGAGAGCAAAAGCTTGCT+GGG | + | chr4.2:92041754-92041773 | MS.gene053170:CDS | 40.0% |
| ! | GTTGTTATGCTTGGTGAGAA+TGG | + | chr4.2:92039872-92039891 | MS.gene053170:CDS | 40.0% |
| ! | TTCACCACCTCCTTTTATTC+AGG | + | chr4.2:92039991-92040010 | MS.gene053170:intron | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | + | chr4.2:92038828-92038847 | MS.gene053170:CDS | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | + | chr4.2:92038825-92038844 | MS.gene053170:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | - | chr4.2:92039802-92039821 | None:intergenic | 40.0% |
| !! | CTTGGTTTGGTTGGGAAAAA+TGG | + | chr4.2:92037549-92037568 | MS.gene053170:CDS | 40.0% |
| !! | GAACCAAGTTTGTTGATCCT+TGG | - | chr4.2:92041726-92041745 | None:intergenic | 40.0% |
| !! | TCGTAGAACCGTAATGGATA+AGG | - | chr4.2:92041109-92041128 | None:intergenic | 40.0% |
| !!! | ATAGGCCATATTTTTGGGCT+GGG | - | chr4.2:92040630-92040649 | None:intergenic | 40.0% |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | - | chr4.2:92040568-92040587 | None:intergenic | 40.0% |
| AAAATTTCCTGCCAGTCAGG+AGG | - | chr4.2:92037743-92037762 | None:intergenic | 45.0% | |
| AAACATGTCTGTCCACTCCA+CGG | - | chr4.2:92037679-92037698 | None:intergenic | 45.0% | |
| AAAGACACAACGAAGCCAAG+AGG | - | chr4.2:92041189-92041208 | None:intergenic | 45.0% | |
| AAATTTCCTGCCAGTCAGGA+GGG | - | chr4.2:92037742-92037761 | None:intergenic | 45.0% | |
| AAGTTCAGGCTTCGTGTAGT+TGG | + | chr4.2:92039824-92039843 | MS.gene053170:CDS | 45.0% | |
| AAGTTGTCCGGTCATTGCTA+AGG | + | chr4.2:92038961-92038980 | MS.gene053170:CDS | 45.0% | |
| ACATCCAGTGCACAATTCCT+CGG | - | chr4.2:92037180-92037199 | None:intergenic | 45.0% | |
| ACATTAGCTGGGGTATGTTG+TGG | + | chr4.2:92038187-92038206 | MS.gene053170:intron | 45.0% | |
| ACGCGTATTGCCATTGTCAA+TGG | + | chr4.2:92036939-92036958 | MS.gene053170:CDS | 45.0% | |
| ATCAATCTCAGCGCCCAAAT+TGG | - | chr4.2:92039351-92039370 | None:intergenic | 45.0% | |
| ATCCAACTAATTTCCGCCCA+AGG | + | chr4.2:92041706-92041725 | MS.gene053170:CDS | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | - | chr4.2:92041711-92041730 | None:intergenic | 45.0% | |
| CAAACTTCGACCTGGCATAA+AGG | - | chr4.2:92040397-92040416 | None:intergenic | 45.0% | |
| CAACAGCAATGGCAAACCTT+TGG | - | chr4.2:92038860-92038879 | None:intergenic | 45.0% | |
| CACATTCATAAAACGGGGCA+AGG | + | chr4.2:92038714-92038733 | MS.gene053170:CDS | 45.0% | |
| CACTATAGGTGGATCTGATG+TGG | + | chr4.2:92040033-92040052 | MS.gene053170:CDS | 45.0% | |
| CAGGGCAGACACTAGAATTA+AGG | - | chr4.2:92040332-92040351 | None:intergenic | 45.0% | |
| CCAAAACTCAAGGCAAGTTC+AGG | + | chr4.2:92039810-92039829 | MS.gene053170:CDS | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | + | chr4.2:92039800-92039819 | MS.gene053170:CDS | 45.0% | |
| CCAACCTGAATAAAAGGAGG+TGG | - | chr4.2:92039998-92040017 | None:intergenic | 45.0% | |
| CTACTGTCGTAGAACCGTAA+TGG | - | chr4.2:92041115-92041134 | None:intergenic | 45.0% | |
| CTGTTTGTATGGAACACCTG+GGG | + | chr4.2:92039168-92039187 | MS.gene053170:CDS | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | + | chr4.2:92039208-92039227 | MS.gene053170:CDS | 45.0% | |
| CTTTATGCCAGGTCGAAGTT+TGG | + | chr4.2:92040395-92040414 | MS.gene053170:intron | 45.0% | |
| GAAGATTGCTTACCTATCCG+AGG | + | chr4.2:92037160-92037179 | MS.gene053170:CDS | 45.0% | |
| GACAACATTCATCCGTATGC+TGG | + | chr4.2:92039904-92039923 | MS.gene053170:CDS | 45.0% | |
| GATAGAGAGCAAAAGCTTGC+TGG | + | chr4.2:92041753-92041772 | MS.gene053170:CDS | 45.0% | |
| GCATCTGTCTCCATTGACAA+TGG | - | chr4.2:92036952-92036971 | None:intergenic | 45.0% | |
| GCTGTTTGTATGGAACACCT+GGG | + | chr4.2:92039167-92039186 | MS.gene053170:CDS | 45.0% | |
| GGATGACTCTCTTACCTTCA+AGG | + | chr4.2:92039282-92039301 | MS.gene053170:CDS | 45.0% | |
| GGCCCATATAAAAAAGGACC+GGG | - | chr4.2:92040547-92040566 | None:intergenic | 45.0% | |
| GGGTATGTTGTGGTTGTGAT+TGG | + | chr4.2:92038197-92038216 | MS.gene053170:intron | 45.0% | |
| GTCAAAATTTCCTGCCAGTC+AGG | - | chr4.2:92037746-92037765 | None:intergenic | 45.0% | |
| GTTCTGCAAACCAAAAGCAG+AGG | - | chr4.2:92037720-92037739 | None:intergenic | 45.0% | |
| TAAATGTCTGCAGGCTGTTG+TGG | - | chr4.2:92041294-92041313 | None:intergenic | 45.0% | |
| TAGCAATGACCGGACAACTT+GGG | - | chr4.2:92038961-92038980 | None:intergenic | 45.0% | |
| TCAGATCCACCTATAGTGTC+AGG | - | chr4.2:92040031-92040050 | None:intergenic | 45.0% | |
| TCGGAATCAAGATGTGCACT+TGG | - | chr4.2:92041330-92041349 | None:intergenic | 45.0% | |
| TGAGCTTCAGCAGTTTCATG+CGG | - | chr4.2:92039758-92039777 | None:intergenic | 45.0% | |
| TTAGCAATGACCGGACAACT+TGG | - | chr4.2:92038962-92038981 | None:intergenic | 45.0% | |
| ! | ACTGCATTCACCTCTGCTTT+TGG | + | chr4.2:92037707-92037726 | MS.gene053170:intron | 45.0% |
| ! | AGCCAAAATTCTAAGGGCAG+TGG | - | chr4.2:92037586-92037605 | None:intergenic | 45.0% |
| ! | ATCATACCGGTTATGACGAC+AGG | - | chr4.2:92037014-92037033 | None:intergenic | 45.0% |
| ! | CAAGCCAAAAAAGTGTGGAC+AGG | + | chr4.2:92036971-92036990 | MS.gene053170:CDS | 45.0% |
| ! | CCACCTCCTTTTATTCAGGT+TGG | + | chr4.2:92039995-92040014 | MS.gene053170:intron | 45.0% |
| ! | CCTGAACTTGCCTTGAGTTT+TGG | - | chr4.2:92039813-92039832 | None:intergenic | 45.0% |
| ! | GTCCACTGCCCTTAGAATTT+TGG | + | chr4.2:92037581-92037600 | MS.gene053170:CDS | 45.0% |
| ! | TATATGGGCCAAATGGGCTT+GGG | + | chr4.2:92040557-92040576 | MS.gene053170:intron | 45.0% |
| ! | TATGCTTGGTGAGAATGGGA+CGG | + | chr4.2:92039877-92039896 | MS.gene053170:CDS | 45.0% |
| ! | TCATACCGGTTATGACGACA+GGG | - | chr4.2:92037013-92037032 | None:intergenic | 45.0% |
| ! | TGCTGTTTGTATGGAACACC+TGG | + | chr4.2:92039166-92039185 | MS.gene053170:CDS | 45.0% |
| ! | TTATATGGGCCAAATGGGCT+TGG | + | chr4.2:92040556-92040575 | MS.gene053170:intron | 45.0% |
| !! | ACTGCCCTTAGAATTTTGGC+TGG | + | chr4.2:92037585-92037604 | MS.gene053170:CDS | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | - | chr4.2:92041722-92041741 | None:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | - | chr4.2:92039803-92039822 | None:intergenic | 45.0% |
| !! | CTTGCCTTGAGTTTTGGTCA+TGG | - | chr4.2:92039807-92039826 | None:intergenic | 45.0% |
| !! | GGAAAGTGCTTGGTTTGGTT+GGG | + | chr4.2:92037541-92037560 | MS.gene053170:CDS | 45.0% |
| !!! | CACTCCTGTCCACACTTTTT+TGG | - | chr4.2:92036978-92036997 | None:intergenic | 45.0% |
| !!! | GATAGGCCATATTTTTGGGC+TGG | - | chr4.2:92040631-92040650 | None:intergenic | 45.0% |
| !!! | GGCCCGGTCCTTTTTTATAT+GGG | + | chr4.2:92040542-92040561 | MS.gene053170:intron | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | + | chr4.2:92040604-92040623 | MS.gene053170:intron | 45.0% |
| !!! | AATTTTTTTTTTTTACAAAT+TGG | + | chr4.2:92037939-92037958 | MS.gene053170:intron | 5.0% |
| !!! | TTCAATTATTTTAAAAATAA+TGG | - | chr4.2:92041575-92041594 | None:intergenic | 5.0% |
| ACCAAACCAAGCACTTTCCC+CGG | - | chr4.2:92037540-92037559 | None:intergenic | 50.0% | |
| ATCCCAGTCAGCAGTGATTG+TGG | - | chr4.2:92041510-92041529 | None:intergenic | 50.0% | |
| CAGTGCACAATTCCTCGGAT+AGG | - | chr4.2:92037175-92037194 | None:intergenic | 50.0% | |
| CGCCCAAGGATCAACAAACT+TGG | + | chr4.2:92041720-92041739 | MS.gene053170:CDS | 50.0% | |
| CTATCCGAGGAATTGTGCAC+TGG | + | chr4.2:92037173-92037192 | MS.gene053170:CDS | 50.0% | |
| CTGTCAAAAATGGGCCAGCT+GGG | - | chr4.2:92041008-92041027 | None:intergenic | 50.0% | |
| GAGGAATTGTGCACTGGATG+TGG | + | chr4.2:92037179-92037198 | MS.gene053170:CDS | 50.0% | |
| GGAGTGGACAGACATGTTTG+AGG | + | chr4.2:92037680-92037699 | MS.gene053170:intron | 50.0% | |
| TATGGAACACCTGGGGCATA+TGG | + | chr4.2:92039175-92039194 | MS.gene053170:CDS | 50.0% | |
| TCTCCACAATCACTGCTGAC+TGG | + | chr4.2:92041504-92041523 | MS.gene053170:CDS | 50.0% | |
| TGAAAGCTGCCCAAGTTGTC+CGG | + | chr4.2:92038949-92038968 | MS.gene053170:CDS | 50.0% | |
| TTCAGGCTTCGTGTAGTTGG+AGG | + | chr4.2:92039827-92039846 | MS.gene053170:CDS | 50.0% | |
| ! | ATGCTTGGTGAGAATGGGAC+GGG | + | chr4.2:92039878-92039897 | MS.gene053170:CDS | 50.0% |
| ! | CTCCACAATCACTGCTGACT+GGG | + | chr4.2:92041505-92041524 | MS.gene053170:CDS | 50.0% |
| !! | ATTATAGGTTGCCGGTTCCG+AGG | + | chr4.2:92037514-92037533 | MS.gene053170:intron | 50.0% |
| !! | GGGAAAGTGCTTGGTTTGGT+TGG | + | chr4.2:92037540-92037559 | MS.gene053170:CDS | 50.0% |
| !!! | CGGCCCGGTCCTTTTTTATA+TGG | + | chr4.2:92040541-92040560 | MS.gene053170:intron | 50.0% |
| AAAACGGGGCAAGGGAACGT+GGG | + | chr4.2:92038723-92038742 | MS.gene053170:CDS | 55.0% | |
| CGTTGCCCTGTCGTCATAAC+CGG | + | chr4.2:92037005-92037024 | MS.gene053170:CDS | 55.0% | |
| GCTGTCAAAAATGGGCCAGC+TGG | - | chr4.2:92041009-92041028 | None:intergenic | 55.0% | |
| GTTACGACTCCATATGCCCC+AGG | - | chr4.2:92039187-92039206 | None:intergenic | 55.0% | |
| GTTTGCAGAACCCTCCTGAC+TGG | + | chr4.2:92037729-92037748 | MS.gene053170:intron | 55.0% | |
| TAAAACGGGGCAAGGGAACG+TGG | + | chr4.2:92038722-92038741 | MS.gene053170:CDS | 55.0% | |
| TAGGAGGGCAGCAACAGCAA+TGG | - | chr4.2:92038871-92038890 | None:intergenic | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | + | chr4.2:92038841-92038860 | MS.gene053170:CDS | 55.0% | |
| !! | ACAGGTGCGCCTTTTAGCTG+TGG | + | chr4.2:92037413-92037432 | MS.gene053170:intron | 55.0% |
| !! | GGGCGCTGAGATTGATTGAG+TGG | + | chr4.2:92039355-92039374 | MS.gene053170:intron | 55.0% |
| !!! | CCATATTTTTGGGCTGGGCC+GGG | - | chr4.2:92040625-92040644 | None:intergenic | 55.0% |
| !!! | GCCATATTTTTGGGCTGGGC+CGG | - | chr4.2:92040626-92040645 | None:intergenic | 55.0% |
| AAAAATGGGCCAGCTGGGCC+GGG | - | chr4.2:92041003-92041022 | None:intergenic | 60.0% | |
| AAACGGGGCAAGGGAACGTG+GGG | + | chr4.2:92038724-92038743 | MS.gene053170:CDS | 60.0% | |
| CAAAAATGGGCCAGCTGGGC+CGG | - | chr4.2:92041004-92041023 | None:intergenic | 60.0% | |
| CCCGGCCCAGCCCAAAAATA+TGG | + | chr4.2:92040622-92040641 | MS.gene053170:intron | 60.0% | |
| TTGCCCAAGCCCATTTGGCC+TGG | - | chr4.2:92040563-92040582 | None:intergenic | 60.0% | |
| ! | GAGCCAGGCCAAATGGGCTT+GGG | + | chr4.2:92040936-92040955 | MS.gene053170:intron | 60.0% |
| !! | GCCGGGGAAAGTGCTTGGTT+TGG | + | chr4.2:92037536-92037555 | MS.gene053170:CDS | 60.0% |
| !!! | TTTTTAGGTCCCGGCCCAGC+TGG | + | chr4.2:92040613-92040632 | MS.gene053170:intron | 60.0% |
| ACTTTCCCCGGCCTCGGAAC+CGG | - | chr4.2:92037528-92037547 | None:intergenic | 65.0% | |
| CCAAGCACTTTCCCCGGCCT+CGG | - | chr4.2:92037534-92037553 | None:intergenic | 65.0% | |
| GCAGAACCCTCCTGACTGGC+AGG | + | chr4.2:92037733-92037752 | MS.gene053170:intron | 65.0% | |
| !! | TAGGTTGCCGGTTCCGAGGC+CGG | + | chr4.2:92037518-92037537 | MS.gene053170:intron | 65.0% |
| !! | AGGTTGCCGGTTCCGAGGCC+GGG | + | chr4.2:92037519-92037538 | MS.gene053170:intron | 70.0% |
| !! | CCGAGGCCGGGGAAAGTGCT+TGG | + | chr4.2:92037531-92037550 | MS.gene053170:CDS | 70.0% |
| !! | GGTTGCCGGTTCCGAGGCCG+GGG | + | chr4.2:92037520-92037539 | MS.gene053170:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 92036936 | 92041800 | 92036936 | ID=MS.gene053170 |
| chr4.2 | mRNA | 92036936 | 92041800 | 92036936 | ID=MS.gene053170.t1;Parent=MS.gene053170 |
| chr4.2 | exon | 92036936 | 92037026 | 92036936 | ID=MS.gene053170.t1.exon1;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92036936 | 92037026 | 92036936 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92037129 | 92037214 | 92037129 | ID=MS.gene053170.t1.exon2;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92037129 | 92037214 | 92037129 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92037319 | 92037416 | 92037319 | ID=MS.gene053170.t1.exon3;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92037319 | 92037416 | 92037319 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92037521 | 92037638 | 92037521 | ID=MS.gene053170.t1.exon4;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92037521 | 92037638 | 92037521 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92037737 | 92037826 | 92037737 | ID=MS.gene053170.t1.exon5;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92037737 | 92037826 | 92037737 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92038687 | 92038991 | 92038687 | ID=MS.gene053170.t1.exon6;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92038687 | 92038991 | 92038687 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92039108 | 92039303 | 92039108 | ID=MS.gene053170.t1.exon7;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92039108 | 92039303 | 92039108 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92039743 | 92039925 | 92039743 | ID=MS.gene053170.t1.exon8;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92039743 | 92039925 | 92039743 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92040013 | 92040282 | 92040013 | ID=MS.gene053170.t1.exon9;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92040013 | 92040282 | 92040013 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92041300 | 92041545 | 92041300 | ID=MS.gene053170.t1.exon10;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92041300 | 92041545 | 92041300 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| chr4.2 | exon | 92041681 | 92041800 | 92041681 | ID=MS.gene053170.t1.exon11;Parent=MS.gene053170.t1 |
| chr4.2 | CDS | 92041681 | 92041800 | 92041681 | ID=cds.MS.gene053170.t1;Parent=MS.gene053170.t1 |
| Gene Sequence |
| Protein sequence |
