Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65434.t1 | XP_013454559.1 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.00E+00 | 1104.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65434.t1 | Q8LPJ4 | 82.9 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 1.2e-295 | 1016.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65434.t1 | A0A072URT6 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0e+00 | 1104.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053170 | MS.gene65434 | 0.929827 | 3.97E-93 | -1.69E-46 |
| MS.gene054555 | MS.gene65434 | 0.97653 | 5.30E-142 | -1.69E-46 |
| MS.gene055134 | MS.gene65434 | 0.819059 | 1.42E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65434.t1 | MTR_4g007890 | 90.833 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1129 |
| MS.gene65434.t1 | MTR_1g114170 | 87.209 | 602 | 75 | 2 | 1 | 600 | 5 | 606 | 0.0 | 1088 |
| MS.gene65434.t1 | MTR_1g025075 | 84.884 | 602 | 89 | 2 | 1 | 600 | 6 | 607 | 0.0 | 1061 |
| MS.gene65434.t1 | MTR_1g025075 | 84.932 | 511 | 75 | 2 | 92 | 600 | 17 | 527 | 0.0 | 894 |
| MS.gene65434.t1 | MTR_1g024860 | 75.092 | 542 | 113 | 5 | 3 | 542 | 8 | 529 | 0.0 | 823 |
| MS.gene65434.t1 | MTR_1g024860 | 26.693 | 251 | 133 | 7 | 370 | 595 | 104 | 328 | 9.56e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65434.t1 | AT4G19210 | 82.862 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 0.0 | 1043 |
| MS.gene65434.t1 | AT3G13640 | 74.043 | 601 | 153 | 2 | 1 | 600 | 5 | 603 | 0.0 | 939 |
| MS.gene65434.t1 | AT4G30300 | 64.571 | 175 | 60 | 2 | 350 | 522 | 1 | 175 | 1.99e-66 | 215 |
| MS.gene65434.t1 | AT4G30300 | 25.140 | 179 | 100 | 5 | 100 | 265 | 21 | 178 | 1.78e-11 | 63.9 |
Find 138 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAGTTGGAGCCAAATT+TGG | 0.165233 | 4.3:+87703946 | MS.gene65434:CDS |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 4.3:+87705162 | MS.gene65434:CDS |
| TATCAACTTGCCGGAGAATT+TGG | 0.186930 | 4.3:+87703686 | MS.gene65434:CDS |
| GTCCACTGCCCTTAGAATTT+TGG | 0.194239 | 4.3:+87703922 | MS.gene65434:CDS |
| TCATATCTCTCTCATTGTTT+TGG | 0.229197 | 4.3:-87705095 | None:intergenic |
| CCTGAACTTGCCTTGAGTTT+TGG | 0.246863 | 4.3:-87706147 | None:intergenic |
| ACTTTCCAGCCAAAATTCTA+AGG | 0.272957 | 4.3:-87703931 | None:intergenic |
| CAACAGAAAATCTTAGGTTT+CGG | 0.282822 | 4.3:+87705597 | MS.gene65434:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 4.3:+87705591 | MS.gene65434:CDS |
| ACAGTGAAACGACCCAAATT+TGG | 0.292894 | 4.3:-87703959 | None:intergenic |
| GATGAATTCTTTCATGTAAC+AGG | 0.293045 | 4.3:-87706463 | None:intergenic |
| TCATCACATCTGATATAAAC+TGG | 0.305491 | 4.3:-87706502 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.307649 | 4.3:+87705598 | MS.gene65434:CDS |
| GACTTTATTTGCTGTTTGTA+TGG | 0.317741 | 4.3:+87705494 | MS.gene65434:CDS |
| GGTCATTGCTAAGGCATAAT+AGG | 0.365075 | 4.3:+87705307 | MS.gene65434:CDS |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.366567 | 4.3:-87703735 | None:intergenic |
| GAACCAAGTTTGTTGATCCT+TGG | 0.372441 | 4.3:-87708059 | None:intergenic |
| AACCAAGTTTGTTGATCCTT+GGG | 0.373348 | 4.3:-87708058 | None:intergenic |
| CTTTCGAGATGAGAGTTTGA+AGG | 0.373390 | 4.3:+87704143 | MS.gene65434:CDS |
| TAACAGTTGATTTGAACTTT+GGG | 0.374527 | 4.3:-87706436 | None:intergenic |
| CTAACAGTTGATTTGAACTT+TGG | 0.376761 | 4.3:-87706437 | None:intergenic |
| CGCCCAAGGATCAACAAACT+TGG | 0.378870 | 4.3:+87708056 | MS.gene65434:CDS |
| CGTTGCCCTGTCGTCATAAC+CGG | 0.380336 | 4.3:+87703347 | MS.gene65434:CDS |
| GATAGAGAGCAAAAGCTTGC+TGG | 0.383710 | 4.3:+87708089 | MS.gene65434:CDS |
| TGTAGTTGGAGGAGAATTTA+CGG | 0.386210 | 4.3:+87706175 | MS.gene65434:CDS |
| ATTGATCACATTCATAAAAC+GGG | 0.386877 | 4.3:+87705045 | MS.gene65434:CDS |
| AATTAAGATTATCAACTTGC+CGG | 0.388066 | 4.3:+87703677 | MS.gene65434:CDS |
| GGAAAGTTGGAGCCAAATTT+GGG | 0.390741 | 4.3:+87703947 | MS.gene65434:CDS |
| GTCAAAATTTCCTGCCAGTC+AGG | 0.392453 | 4.3:-87704081 | None:intergenic |
| TGCAGCAATAATACGCTGTT+CGG | 0.396922 | 4.3:-87707682 | None:intergenic |
| TGACAGAGTTATTGTTTATG+AGG | 0.398914 | 4.3:+87707788 | MS.gene65434:CDS |
| CAACAGCAATGGCAAACCTT+TGG | 0.402310 | 4.3:-87705194 | None:intergenic |
| CCGAGGCCGGGGAAAGTGCT+TGG | 0.412378 | 4.3:+87703872 | MS.gene65434:CDS |
| ACTTTCCCCGGCCTCGGAAC+CGG | 0.412394 | 4.3:-87703866 | None:intergenic |
| GGGAAAGTGCTTGGTTTGGT+TGG | 0.414362 | 4.3:+87703881 | MS.gene65434:CDS |
| TATAATACAGGTTAGCTTCA+AGG | 0.416213 | 4.3:+87705014 | MS.gene65434:intron |
| AGTTATGTATTATAGGTTGC+CGG | 0.419878 | 4.3:+87703847 | MS.gene65434:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.419970 | 4.3:-87708044 | None:intergenic |
| TGCAAAGAAAACAGCCTTTG+TGG | 0.420036 | 4.3:+87707731 | MS.gene65434:CDS |
| CCAAAACTCAAGGCAAGTTC+AGG | 0.420940 | 4.3:+87706147 | MS.gene65434:CDS |
| AGGTTGCCGGTTCCGAGGCC+GGG | 0.422004 | 4.3:+87703860 | MS.gene65434:intron |
| GCCGGGGAAAGTGCTTGGTT+TGG | 0.422861 | 4.3:+87703877 | MS.gene65434:CDS |
| GGAATTAATATCTTCTTGTC+TGG | 0.423856 | 4.3:+87705566 | MS.gene65434:CDS |
| ATAATCTTAATTGCTTCAAA+AGG | 0.425895 | 4.3:-87703666 | None:intergenic |
| GGAAAGTGCTTGGTTTGGTT+GGG | 0.426497 | 4.3:+87703882 | MS.gene65434:CDS |
| TATTGATCACATTCATAAAA+CGG | 0.431274 | 4.3:+87705044 | MS.gene65434:CDS |
| GTTTCCTTATGTCTTTGTCT+TGG | 0.432752 | 4.3:+87706593 | MS.gene65434:CDS |
| GGATGACTCTCTTACCTTCA+AGG | 0.434243 | 4.3:+87705619 | MS.gene65434:CDS |
| TAGGTTGCCGGTTCCGAGGC+CGG | 0.434876 | 4.3:+87703859 | MS.gene65434:intron |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 4.3:-87705548 | None:intergenic |
| ATAGATTATTTATACCTTGA+AGG | 0.440136 | 4.3:-87705633 | None:intergenic |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 4.3:+87705163 | MS.gene65434:CDS |
| TCTCCACAATCACTGCTGAC+TGG | 0.442692 | 4.3:+87707840 | MS.gene65434:CDS |
| TCTCAGATTGTTGTTATGCT+TGG | 0.451315 | 4.3:+87706200 | MS.gene65434:CDS |
| GTTGTTATGCTTGGTGAGAA+TGG | 0.453138 | 4.3:+87706209 | MS.gene65434:CDS |
| TGAACACGATCTTAGTGTCT+TGG | 0.458360 | 4.3:+87705460 | MS.gene65434:CDS |
| CTTATGTCTTTGTCTTGGAA+AGG | 0.458540 | 4.3:+87706598 | MS.gene65434:CDS |
| TGGATGTGGTATTTGTGTTA+AGG | 0.458616 | 4.3:+87703535 | MS.gene65434:CDS |
| AAAGACACCACTCATAGATA+TGG | 0.460544 | 4.3:+87703711 | MS.gene65434:CDS |
| GTTTGCAGAACCCTCCTGAC+TGG | 0.466184 | 4.3:+87704067 | MS.gene65434:intron |
| CTCCACAATCACTGCTGACT+GGG | 0.473425 | 4.3:+87707841 | MS.gene65434:CDS |
| GCAGAACCCTCCTGACTGGC+AGG | 0.473883 | 4.3:+87704071 | MS.gene65434:intron |
| TATGGAACACCTGGTGCATA+TGG | 0.475475 | 4.3:+87705512 | MS.gene65434:CDS |
| ACGCGTATTGCCATTGTCAA+TGG | 0.480880 | 4.3:+87703281 | MS.gene65434:CDS |
| CTCACATCAAGATAACTAGA+AGG | 0.483153 | 4.3:-87705255 | None:intergenic |
| TTTGCAGTACAGTCAATTGA+AGG | 0.483786 | 4.3:-87707816 | None:intergenic |
| AACTTTGGGTTAATTGTCTG+AGG | 0.488966 | 4.3:-87706422 | None:intergenic |
| ACCAAACCAAGCACTTTCCC+CGG | 0.489846 | 4.3:-87703878 | None:intergenic |
| ATCATACCGGTTATGACGAC+AGG | 0.490261 | 4.3:-87703353 | None:intergenic |
| TGAAAGCTGCCCAAGTTGTC+CGG | 0.491384 | 4.3:+87705286 | MS.gene65434:CDS |
| TGCTGTTTGTATGGAACACC+TGG | 0.492329 | 4.3:+87705503 | MS.gene65434:CDS |
| GTGTCTTTGTCCAAATTCTC+CGG | 0.498181 | 4.3:-87703696 | None:intergenic |
| TATAGGAAGATTGTGTATTG+AGG | 0.500669 | 4.3:+87703466 | MS.gene65434:intron |
| TTGTTATGCTTGGTGAGAAT+GGG | 0.504018 | 4.3:+87706210 | MS.gene65434:CDS |
| AAGTTCAGGCTTCGTGTAGT+TGG | 0.505597 | 4.3:+87706161 | MS.gene65434:CDS |
| GGTTGCCGGTTCCGAGGCCG+GGG | 0.505721 | 4.3:+87703861 | MS.gene65434:intron |
| AAACAATGAGAGAGATATGA+AGG | 0.508578 | 4.3:+87705098 | MS.gene65434:CDS |
| CACATTCATAAAACGGGGCA+AGG | 0.508774 | 4.3:+87705051 | MS.gene65434:CDS |
| TAACACATACTGATAAGAAA+AGG | 0.514344 | 4.3:-87707869 | None:intergenic |
| GACAACATTCATCCGTATGC+TGG | 0.519437 | 4.3:+87706241 | MS.gene65434:CDS |
| TTCAGGCTTCGTGTAGTTGG+AGG | 0.519982 | 4.3:+87706164 | MS.gene65434:CDS |
| TAAAACGGGGCAAGGGAACG+TGG | 0.521293 | 4.3:+87705059 | MS.gene65434:CDS |
| TCAGATCCACCTATAGTGTC+AGG | 0.525068 | 4.3:-87706365 | None:intergenic |
| AGCCAAAATTCTAAGGGCAG+TGG | 0.528739 | 4.3:-87703924 | None:intergenic |
| ATAGAGAGCAAAAGCTTGCT+GGG | 0.529331 | 4.3:+87708090 | MS.gene65434:CDS |
| TCTATCAGATAAATGTCTGC+AGG | 0.531946 | 4.3:-87707636 | None:intergenic |
| CTTTCCAAGACAAAGACATA+AGG | 0.539595 | 4.3:-87706597 | None:intergenic |
| TTAGCAATGACCGGACAACT+TGG | 0.539932 | 4.3:-87705296 | None:intergenic |
| TCATTGAAACCTGACACTAT+AGG | 0.540340 | 4.3:+87706356 | MS.gene65434:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 4.3:+87705150 | MS.gene65434:CDS |
| GACAGAGTTATTGTTTATGA+GGG | 0.542830 | 4.3:+87707789 | MS.gene65434:CDS |
| CATCACATCTGATATAAACT+GGG | 0.543431 | 4.3:-87706501 | None:intergenic |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 4.3:+87705545 | MS.gene65434:CDS |
| CCAAGCACTTTCCCCGGCCT+CGG | 0.544800 | 4.3:-87703872 | None:intergenic |
| ACATCCAGTGCACAATTCCT+CGG | 0.548548 | 4.3:-87703519 | None:intergenic |
| ATCCCAGTCAGCAGTGATTG+TGG | 0.548844 | 4.3:-87707843 | None:intergenic |
| ACTACTTATCGAACAGCTGA+TGG | 0.549716 | 4.3:+87706529 | MS.gene65434:CDS |
| AAACCTGAACTTAGTCATCA+AGG | 0.550955 | 4.3:-87708124 | None:intergenic |
| AAAACGGGGCAAGGGAACGT+GGG | 0.554809 | 4.3:+87705060 | MS.gene65434:CDS |
| TTGCTGCAAAAGTTATCAAG+AGG | 0.559789 | 4.3:+87707697 | MS.gene65434:CDS |
| CTATCCGAGGAATTGTGCAC+TGG | 0.564876 | 4.3:+87703515 | MS.gene65434:CDS |
| TGAGCTTCAGCAGTTTCATG+TGG | 0.568344 | 4.3:-87706092 | None:intergenic |
| CTTTCCAGCCAAAATTCTAA+GGG | 0.572535 | 4.3:-87703930 | None:intergenic |
| ATCCAACTAATTTCCGCCCA+AGG | 0.577928 | 4.3:+87708042 | MS.gene65434:CDS |
| CACTATAGGTGGATCTGATG+TGG | 0.580575 | 4.3:+87706370 | MS.gene65434:CDS |
| AAGTTGTCCGGTCATTGCTA+AGG | 0.581006 | 4.3:+87705298 | MS.gene65434:CDS |
| TATTATGCCTTAGCAATGAC+CGG | 0.582030 | 4.3:-87705305 | None:intergenic |
| CAGTGCACAATTCCTCGGAT+AGG | 0.583504 | 4.3:-87703514 | None:intergenic |
| TTGTGTGAAATATTGAACTC+AGG | 0.583680 | 4.3:-87706398 | None:intergenic |
| AAAATTTCCTGCCAGTCAGG+AGG | 0.583757 | 4.3:-87704078 | None:intergenic |
| TCGGAATCAAGATGTGCACT+TGG | 0.586777 | 4.3:-87707663 | None:intergenic |
| TAGCAATGACCGGACAACTT+GGG | 0.588276 | 4.3:-87705295 | None:intergenic |
| ACTAAAAGAATACCAGCATA+CGG | 0.589186 | 4.3:-87706253 | None:intergenic |
| ATCAGCTGTTCGATAAGTAG+TGG | 0.593241 | 4.3:-87706527 | None:intergenic |
| GAGGAATTGTGCACTGGATG+TGG | 0.596595 | 4.3:+87703521 | MS.gene65434:CDS |
| TAGGAGGGCAGCAACAGCAA+TGG | 0.601333 | 4.3:-87705205 | None:intergenic |
| AAATTTCCTGCCAGTCAGGA+GGG | 0.605918 | 4.3:-87704077 | None:intergenic |
| ATTATAGGTTGCCGGTTCCG+AGG | 0.606131 | 4.3:+87703855 | MS.gene65434:intron |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 4.3:-87708055 | None:intergenic |
| ATGCTTGGTGAGAATGGGAC+GGG | 0.610087 | 4.3:+87706215 | MS.gene65434:CDS |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 4.3:+87705164 | MS.gene65434:CDS |
| GGTTGAGCATGATTTCATCA+TGG | 0.619459 | 4.3:+87707752 | MS.gene65434:CDS |
| AAACGGGGCAAGGGAACGTG+GGG | 0.627128 | 4.3:+87705061 | MS.gene65434:CDS |
| GCATCTGTCTCCATTGACAA+TGG | 0.633618 | 4.3:-87703291 | None:intergenic |
| ACATTCATAAAACGGGGCAA+GGG | 0.634571 | 4.3:+87705052 | MS.gene65434:CDS |
| TTGAAACCTGACACTATAGG+TGG | 0.643934 | 4.3:+87706359 | MS.gene65434:CDS |
| GAAATCATGCTCAACCACAA+AGG | 0.644019 | 4.3:-87707745 | None:intergenic |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 4.3:+87705165 | MS.gene65434:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.658017 | 4.3:+87706137 | MS.gene65434:CDS |
| GAAGATTGCTTACCTATCCG+AGG | 0.658534 | 4.3:+87703502 | MS.gene65434:CDS |
| GTTACGACTCCATATGCACC+AGG | 0.659399 | 4.3:-87705521 | None:intergenic |
| ATTAGGACCATATCTATGAG+TGG | 0.668366 | 4.3:-87703718 | None:intergenic |
| CAACAAACTTGGTTCAACCA+AGG | 0.671800 | 4.3:+87708067 | MS.gene65434:CDS |
| GTTATCTTGATGTGAGACAG+AGG | 0.675184 | 4.3:+87705262 | MS.gene65434:CDS |
| TATGCTTGGTGAGAATGGGA+CGG | 0.683302 | 4.3:+87706214 | MS.gene65434:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.688133 | 4.3:-87706500 | None:intergenic |
| TCATACCGGTTATGACGACA+GGG | 0.697152 | 4.3:-87703352 | None:intergenic |
| TTGATCACATTCATAAAACG+GGG | 0.709656 | 4.3:+87705046 | MS.gene65434:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACATAATAATTGATAAA+TGG | - | chr4.3:87704325-87704344 | None:intergenic | 10.0% |
| !! | ATTTATCAATTATTATGTAA+TGG | + | chr4.3:87704324-87704343 | MS.gene65434:intron | 10.0% |
| !! | GAATTCAATTAATATTTATA+TGG | - | chr4.3:87707423-87707442 | None:intergenic | 10.0% |
| !! | TATTCTTATAAATTAGATAT+TGG | + | chr4.3:87705968-87705987 | MS.gene65434:intron | 10.0% |
| !! | TTTGTAAAAAAAAAAATTAC+TGG | - | chr4.3:87704275-87704294 | None:intergenic | 10.0% |
| !!! | AAAATGTTTTTCAAAATTAA+AGG | - | chr4.3:87704830-87704849 | None:intergenic | 10.0% |
| !! | TACAAAACGATATTAAATAA+AGG | - | chr4.3:87704181-87704200 | None:intergenic | 15.0% |
| !! | TCAAATGAAAATATTGATAA+TGG | + | chr4.3:87707231-87707250 | MS.gene65434:intron | 15.0% |
| !! | TTCAATATATGTTATAATAC+AGG | + | chr4.3:87705002-87705021 | MS.gene65434:intron | 15.0% |
| !!! | AAAAAAAAAAAGGCTAATTT+TGG | - | chr4.3:87703990-87704009 | None:intergenic | 15.0% |
| !!! | AAAAGTTCTAACAAAATATA+AGG | - | chr4.3:87705909-87705928 | None:intergenic | 15.0% |
| !!! | ATAAGAATATTTTCATTTTG+AGG | - | chr4.3:87705957-87705976 | None:intergenic | 15.0% |
| !!! | CAAATGAAAATATTGATAAT+GGG | + | chr4.3:87707232-87707251 | MS.gene65434:intron | 15.0% |
| !!! | GTTTTTCTGATTTTTTTTAT+TGG | + | chr4.3:87704298-87704317 | MS.gene65434:intron | 15.0% |
| !!! | TATGTGTTATTATTTTTCAA+TGG | + | chr4.3:87707883-87707902 | MS.gene65434:intron | 15.0% |
| !!! | TCATATTTTAACAAAAAGAT+AGG | - | chr4.3:87706985-87707004 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAATATGAT+TGG | + | chr4.3:87706986-87707005 | MS.gene65434:intron | 15.0% |
| !!! | TGAAATTTTATGTTAATGTT+TGG | + | chr4.3:87703400-87703419 | MS.gene65434:intron | 15.0% |
| !!! | TGATTTTTTATGATTTGTTA+TGG | + | chr4.3:87706824-87706843 | MS.gene65434:intron | 15.0% |
| !!! | TTTTTATTCAAATAAACTCA+TGG | + | chr4.3:87705827-87705846 | MS.gene65434:intron | 15.0% |
| !! | AGAATTTCTTTAATTGAGAA+GGG | + | chr4.3:87704374-87704393 | MS.gene65434:intron | 20.0% |
| !! | ATAATCTTAATTGCTTCAAA+AGG | - | chr4.3:87703669-87703688 | None:intergenic | 20.0% |
| !! | ATAGATTATTTATACCTTGA+AGG | - | chr4.3:87705636-87705655 | None:intergenic | 20.0% |
| !! | TAGAATTTCTTTAATTGAGA+AGG | + | chr4.3:87704373-87704392 | MS.gene65434:intron | 20.0% |
| !! | TATTGATCACATTCATAAAA+CGG | + | chr4.3:87705044-87705063 | MS.gene65434:CDS | 20.0% |
| !! | TTTGTTAAAATATGATTGGA+TGG | + | chr4.3:87706990-87707009 | MS.gene65434:intron | 20.0% |
| !!! | AGGAAATTTTGACTTATTAT+CGG | + | chr4.3:87704091-87704110 | MS.gene65434:CDS | 20.0% |
| !!! | ATGTTTATTTCTACATTACA+AGG | - | chr4.3:87704715-87704734 | None:intergenic | 20.0% |
| !!! | ATTCAGAAACCAAATATTTT+CGG | - | chr4.3:87705804-87705823 | None:intergenic | 20.0% |
| !!! | CATATTAACACAGAATTTTT+AGG | - | chr4.3:87703783-87703802 | None:intergenic | 20.0% |
| !!! | CTATTTCGTTTGAAATAAAT+AGG | - | chr4.3:87707572-87707591 | None:intergenic | 20.0% |
| !!! | TATCTTATTGATTTAGACTT+TGG | + | chr4.3:87704213-87704232 | MS.gene65434:intron | 20.0% |
| !!! | TTGTTAGAACTTTTAGATAT+TGG | + | chr4.3:87705915-87705934 | MS.gene65434:intron | 20.0% |
| ! | AAATTCAGATTTATCTTGAC+TGG | - | chr4.3:87705404-87705423 | None:intergenic | 25.0% |
| ! | AAGAAATTCTACAACACTAT+AGG | - | chr4.3:87704364-87704383 | None:intergenic | 25.0% |
| ! | AATTAAGATTATCAACTTGC+CGG | + | chr4.3:87703677-87703696 | MS.gene65434:CDS | 25.0% |
| ! | AGCTATTCAAGAATGTAAAA+AGG | - | chr4.3:87706702-87706721 | None:intergenic | 25.0% |
| ! | ATGATTATGCGTGTAATTAT+AGG | + | chr4.3:87703449-87703468 | MS.gene65434:intron | 25.0% |
| ! | ATGGAATATAAAGCCAATTT+GGG | + | chr4.3:87705672-87705691 | MS.gene65434:intron | 25.0% |
| ! | ATTGAATTCCTTATCCATTA+CGG | + | chr4.3:87707434-87707453 | MS.gene65434:intron | 25.0% |
| ! | ATTGATCACATTCATAAAAC+GGG | + | chr4.3:87705045-87705064 | MS.gene65434:CDS | 25.0% |
| ! | CAATTATTATGTAATGGTAG+AGG | + | chr4.3:87704330-87704349 | MS.gene65434:intron | 25.0% |
| ! | CCACGGTATAAAAAAAAAAA+AGG | - | chr4.3:87704000-87704019 | None:intergenic | 25.0% |
| ! | TAAAAAGGAAAGAAAAAGCA+GGG | - | chr4.3:87706687-87706706 | None:intergenic | 25.0% |
| ! | TAACACATACTGATAAGAAA+AGG | - | chr4.3:87707872-87707891 | None:intergenic | 25.0% |
| ! | TATCTATCTATCTATCTATG+CGG | - | chr4.3:87704596-87704615 | None:intergenic | 25.0% |
| ! | TATGGAATATAAAGCCAATT+TGG | + | chr4.3:87705671-87705690 | MS.gene65434:intron | 25.0% |
| ! | TCAAGAGAGTTATGTATTAT+AGG | + | chr4.3:87703840-87703859 | MS.gene65434:intron | 25.0% |
| ! | TGCACATTCAGAAAAATATA+AGG | - | chr4.3:87704884-87704903 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | + | chr4.3:87707297-87707316 | MS.gene65434:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | + | chr4.3:87707298-87707317 | MS.gene65434:intron | 25.0% |
| !! | AAAAAGATAGGCCATATTTT+TGG | - | chr4.3:87706973-87706992 | None:intergenic | 25.0% |
| !! | AAAAGATAGGCCATATTTTT+GGG | - | chr4.3:87706972-87706991 | None:intergenic | 25.0% |
| !! | ACTTTTCTCAATTCTATTGT+TGG | - | chr4.3:87705777-87705796 | None:intergenic | 25.0% |
| !! | TAGATAGATAATCTTTGAAG+AGG | + | chr4.3:87704610-87704629 | MS.gene65434:intron | 25.0% |
| !! | TATTATTACCTTGATGACTA+AGG | + | chr4.3:87708116-87708135 | MS.gene65434:CDS | 25.0% |
| !!! | AAAGAAGTTTTGAATCTTTC+TGG | + | chr4.3:87706554-87706573 | MS.gene65434:CDS | 25.0% |
| !!! | ATTTTTAGAACTATACCTCT+TGG | + | chr4.3:87707507-87707526 | MS.gene65434:intron | 25.0% |
| !!! | CCTTTTTTTTTTTTATACCG+TGG | + | chr4.3:87703997-87704016 | MS.gene65434:intron | 25.0% |
| !!! | GAAATTTTGACTTATTATCG+GGG | + | chr4.3:87704093-87704112 | MS.gene65434:CDS | 25.0% |
| !!! | GGAAATTTTGACTTATTATC+GGG | + | chr4.3:87704092-87704111 | MS.gene65434:CDS | 25.0% |
| !!! | TAACAGTTGATTTGAACTTT+GGG | - | chr4.3:87706439-87706458 | None:intergenic | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | + | chr4.3:87706935-87706954 | MS.gene65434:intron | 25.0% |
| !!! | TGGCTTTATATTCCATAAAT+GGG | - | chr4.3:87705668-87705687 | None:intergenic | 25.0% |
| !!! | TTGGCTTTATATTCCATAAA+TGG | - | chr4.3:87705669-87705688 | None:intergenic | 25.0% |
| AAAAGCGATACACTAATTCA+TGG | + | chr4.3:87704483-87704502 | MS.gene65434:intron | 30.0% | |
| AAACAATGAGAGAGATATGA+AGG | + | chr4.3:87705098-87705117 | MS.gene65434:CDS | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | + | chr4.3:87705598-87705617 | MS.gene65434:CDS | 30.0% | |
| AACAGTATCAAAGTTGAACT+CGG | - | chr4.3:87704648-87704667 | None:intergenic | 30.0% | |
| AATGAACCAACCTGAATAAA+AGG | - | chr4.3:87706341-87706360 | None:intergenic | 30.0% | |
| ACTAAAAGAATACCAGCATA+CGG | - | chr4.3:87706256-87706275 | None:intergenic | 30.0% | |
| AGTACTGCAGTAATACAAAT+TGG | + | chr4.3:87704685-87704704 | MS.gene65434:intron | 30.0% | |
| AGTTATGTATTATAGGTTGC+CGG | + | chr4.3:87703847-87703866 | MS.gene65434:intron | 30.0% | |
| ATATAAGGACAACAAATGCT+AGG | - | chr4.3:87704869-87704888 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | - | chr4.3:87706503-87706522 | None:intergenic | 30.0% | |
| ATGTTGACGTTTCATTAACT+GGG | + | chr4.3:87704419-87704438 | MS.gene65434:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | + | chr4.3:87705597-87705616 | MS.gene65434:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | + | chr4.3:87705150-87705169 | MS.gene65434:CDS | 30.0% | |
| CATCACATCTGATATAAACT+GGG | - | chr4.3:87706504-87706523 | None:intergenic | 30.0% | |
| CCGGTTAAAATTGTCTATAT+CGG | + | chr4.3:87706858-87706877 | MS.gene65434:intron | 30.0% | |
| CTTTATATTCCATAAATGGG+AGG | - | chr4.3:87705665-87705684 | None:intergenic | 30.0% | |
| GACAGAGTTATTGTTTATGA+GGG | + | chr4.3:87707789-87707808 | MS.gene65434:CDS | 30.0% | |
| GATGAATTCTTTCATGTAAC+AGG | - | chr4.3:87706466-87706485 | None:intergenic | 30.0% | |
| GGAATTAATATCTTCTTGTC+TGG | + | chr4.3:87705566-87705585 | MS.gene65434:CDS | 30.0% | |
| GTAAAAAGGAAAGAAAAAGC+AGG | - | chr4.3:87706688-87706707 | None:intergenic | 30.0% | |
| TAAGCACATTAGAAACCAAA+AGG | - | chr4.3:87704981-87705000 | None:intergenic | 30.0% | |
| TATAAATGATGCATCGCAAA+AGG | - | chr4.3:87705862-87705881 | None:intergenic | 30.0% | |
| TATAGGAAGATTGTGTATTG+AGG | + | chr4.3:87703466-87703485 | MS.gene65434:intron | 30.0% | |
| TCAATCAATCTCAGTATTGT+AGG | - | chr4.3:87705734-87705753 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | - | chr4.3:87706505-87706524 | None:intergenic | 30.0% | |
| TGACAGAGTTATTGTTTATG+AGG | + | chr4.3:87707788-87707807 | MS.gene65434:CDS | 30.0% | |
| TTCAACAACAATTACATAGC+TGG | - | chr4.3:87705444-87705463 | None:intergenic | 30.0% | |
| TTGATCACATTCATAAAACG+GGG | + | chr4.3:87705046-87705065 | MS.gene65434:CDS | 30.0% | |
| TTGTGTGAAATATTGAACTC+AGG | - | chr4.3:87706401-87706420 | None:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | + | chr4.3:87705591-87705610 | MS.gene65434:CDS | 30.0% | |
| TTTATCTTGACTGGAAATCA+AGG | - | chr4.3:87705395-87705414 | None:intergenic | 30.0% | |
| ! | AAAAAAACCCGAGTGTATTT+TGG | + | chr4.3:87706920-87706939 | MS.gene65434:intron | 30.0% |
| ! | AAAAAACCCGAGTGTATTTT+GGG | + | chr4.3:87706921-87706940 | MS.gene65434:intron | 30.0% |
| ! | AAAATTATGTTTTGCTCTCG+TGG | + | chr4.3:87707953-87707972 | MS.gene65434:intron | 30.0% |
| ! | AAAGTAGTGCCGAAAATATT+TGG | + | chr4.3:87705792-87705811 | MS.gene65434:intron | 30.0% |
| ! | ACATGTATATCTCAGCTTTT+AGG | - | chr4.3:87705227-87705246 | None:intergenic | 30.0% |
| ! | ACTGCAGTACTTTTATGATA+TGG | - | chr4.3:87704676-87704695 | None:intergenic | 30.0% |
| ! | ATAGATAATCTTTGAAGAGG+TGG | + | chr4.3:87704613-87704632 | MS.gene65434:intron | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | + | chr4.3:87703736-87703755 | MS.gene65434:CDS | 30.0% |
| ! | CTACTTCCATGTCAATTTTT+CGG | + | chr4.3:87707366-87707385 | MS.gene65434:intron | 30.0% |
| ! | TAGATAATCTTTGAAGAGGT+GGG | + | chr4.3:87704614-87704633 | MS.gene65434:intron | 30.0% |
| ! | TCATATCTCTCTCATTGTTT+TGG | - | chr4.3:87705098-87705117 | None:intergenic | 30.0% |
| ! | TTAAGAAAGGTTCTTCCTTT+TGG | + | chr4.3:87704963-87704982 | MS.gene65434:intron | 30.0% |
| !! | ATTTGTGTTAAGGTATTGAG+AGG | + | chr4.3:87703545-87703564 | MS.gene65434:intron | 30.0% |
| !! | CCGATATAGACAATTTTAAC+CGG | - | chr4.3:87706861-87706880 | None:intergenic | 30.0% |
| !! | CTAACAGTTGATTTGAACTT+TGG | - | chr4.3:87706440-87706459 | None:intergenic | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | - | chr4.3:87703738-87703757 | None:intergenic | 30.0% |
| !! | CTTATTGATTTAGACTTTGG+TGG | + | chr4.3:87704216-87704235 | MS.gene65434:intron | 30.0% |
| !! | GACTTTATTTGCTGTTTGTA+TGG | + | chr4.3:87705494-87705513 | MS.gene65434:CDS | 30.0% |
| !! | TATAATACAGGTTAGCTTCA+AGG | + | chr4.3:87705014-87705033 | MS.gene65434:intron | 30.0% |
| !! | TGAAAATATTGATAATGGGC+CGG | + | chr4.3:87707236-87707255 | MS.gene65434:intron | 30.0% |
| !!! | CTTTTTTATATGGGCCAAAT+GGG | + | chr4.3:87706888-87706907 | MS.gene65434:intron | 30.0% |
| !!! | TTTTTTTTTATACCGTGGAG+TGG | + | chr4.3:87704002-87704021 | MS.gene65434:intron | 30.0% |
| AAACTAGCCCAAAATACACT+CGG | - | chr4.3:87706931-87706950 | None:intergenic | 35.0% | |
| AAAGACACCACTCATAGATA+TGG | + | chr4.3:87703711-87703730 | MS.gene65434:CDS | 35.0% | |
| AACAAAACACCGAATCATAC+CGG | - | chr4.3:87703369-87703388 | None:intergenic | 35.0% | |
| ACTTTCCAGCCAAAATTCTA+AGG | - | chr4.3:87703934-87703953 | None:intergenic | 35.0% | |
| ATATTCCATAAATGGGAGGT+AGG | - | chr4.3:87705661-87705680 | None:intergenic | 35.0% | |
| ATGTTGACATTGACATTAGC+TGG | + | chr4.3:87704512-87704531 | MS.gene65434:intron | 35.0% | |
| ATTAGGACCATATCTATGAG+TGG | - | chr4.3:87703721-87703740 | None:intergenic | 35.0% | |
| CAATACTGAGATTGATTGAG+TGG | + | chr4.3:87705735-87705754 | MS.gene65434:intron | 35.0% | |
| CATGTTGACGTTTCATTAAC+TGG | + | chr4.3:87704418-87704437 | MS.gene65434:intron | 35.0% | |
| CCATTTGGCCCATATAAAAA+AGG | - | chr4.3:87706890-87706909 | None:intergenic | 35.0% | |
| CTAGACACAACATTAAAGCA+GGG | - | chr4.3:87706060-87706079 | None:intergenic | 35.0% | |
| CTCACATCAAGATAACTAGA+AGG | - | chr4.3:87705258-87705277 | None:intergenic | 35.0% | |
| CTTATGTCTTTGTCTTGGAA+AGG | + | chr4.3:87706598-87706617 | MS.gene65434:CDS | 35.0% | |
| CTTTCCAAGACAAAGACATA+AGG | - | chr4.3:87706600-87706619 | None:intergenic | 35.0% | |
| CTTTCCAGCCAAAATTCTAA+GGG | - | chr4.3:87703933-87703952 | None:intergenic | 35.0% | |
| GAAGTAGAGCTGTCAAAAAT+GGG | - | chr4.3:87707353-87707372 | None:intergenic | 35.0% | |
| GATAGTGTGACACTTAAGAA+AGG | + | chr4.3:87704950-87704969 | MS.gene65434:intron | 35.0% | |
| GTGTTTCCGAAAAATTGACA+TGG | - | chr4.3:87707375-87707394 | None:intergenic | 35.0% | |
| GTTTCCTTATGTCTTTGTCT+TGG | + | chr4.3:87706593-87706612 | MS.gene65434:CDS | 35.0% | |
| TAAAATTGTCTATATCGGCC+CGG | + | chr4.3:87706863-87706882 | MS.gene65434:intron | 35.0% | |
| TATTATGCCTTAGCAATGAC+CGG | - | chr4.3:87705308-87705327 | None:intergenic | 35.0% | |
| TCATTGAAACCTGACACTAT+AGG | + | chr4.3:87706356-87706375 | MS.gene65434:CDS | 35.0% | |
| TCTATCAGATAAATGTCTGC+AGG | - | chr4.3:87707639-87707658 | None:intergenic | 35.0% | |
| TGGATGTGGTATTTGTGTTA+AGG | + | chr4.3:87703535-87703554 | MS.gene65434:CDS | 35.0% | |
| TGGTTGGGAAAAATGGAATT+GGG | + | chr4.3:87703897-87703916 | MS.gene65434:CDS | 35.0% | |
| TGTAGTTGGAGGAGAATTTA+CGG | + | chr4.3:87706175-87706194 | MS.gene65434:CDS | 35.0% | |
| TGTTGACATTGACATTAGCT+GGG | + | chr4.3:87704513-87704532 | MS.gene65434:intron | 35.0% | |
| TTCATAGTTTCCTTTATGCC+AGG | + | chr4.3:87706721-87706740 | MS.gene65434:intron | 35.0% | |
| TTGCTGCAAAAGTTATCAAG+AGG | + | chr4.3:87707697-87707716 | MS.gene65434:CDS | 35.0% | |
| TTGGTTGGGAAAAATGGAAT+TGG | + | chr4.3:87703896-87703915 | MS.gene65434:CDS | 35.0% | |
| TTTAGGTAACCACAGCTAAA+AGG | - | chr4.3:87703766-87703785 | None:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | - | chr4.3:87707819-87707838 | None:intergenic | 35.0% | |
| ! | AACTTTGGGTTAATTGTCTG+AGG | - | chr4.3:87706425-87706444 | None:intergenic | 35.0% |
| ! | AGATAATCTTTGAAGAGGTG+GGG | + | chr4.3:87704615-87704634 | MS.gene65434:intron | 35.0% |
| ! | ATCTATTTGTGTTGACGTCA+TGG | + | chr4.3:87707480-87707499 | MS.gene65434:intron | 35.0% |
| ! | ATGATTTGCGACGATAATCT+GGG | + | chr4.3:87703601-87703620 | MS.gene65434:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | - | chr4.3:87705599-87705618 | None:intergenic | 35.0% |
| ! | GCAATCTTATGCAGTTTTCA+AGG | - | chr4.3:87706639-87706658 | None:intergenic | 35.0% |
| ! | TATGATTTGCGACGATAATC+TGG | + | chr4.3:87703600-87703619 | MS.gene65434:intron | 35.0% |
| ! | TCTCAGATTGTTGTTATGCT+TGG | + | chr4.3:87706200-87706219 | MS.gene65434:CDS | 35.0% |
| ! | TGTATATCTCAGCTTTTAGG+AGG | - | chr4.3:87705224-87705243 | None:intergenic | 35.0% |
| ! | TTGTTATGCTTGGTGAGAAT+GGG | + | chr4.3:87706210-87706229 | MS.gene65434:CDS | 35.0% |
| !! | AACCAAGTTTGTTGATCCTT+GGG | - | chr4.3:87708061-87708080 | None:intergenic | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | + | chr4.3:87705163-87705182 | MS.gene65434:CDS | 35.0% |
| !! | GTATATCTCAGCTTTTAGGA+GGG | - | chr4.3:87705223-87705242 | None:intergenic | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | + | chr4.3:87705164-87705183 | MS.gene65434:CDS | 35.0% |
| !!! | CCTTTTTTATATGGGCCAAA+TGG | + | chr4.3:87706887-87706906 | MS.gene65434:intron | 35.0% |
| !!! | GAAGTTTTGAATCTTTCTGG+TGG | + | chr4.3:87706557-87706576 | MS.gene65434:CDS | 35.0% |
| !!! | TAGAATTTTGGCTGGAAAGT+TGG | + | chr4.3:87703934-87703953 | MS.gene65434:CDS | 35.0% |
| AACTAGCCCAAAATACACTC+GGG | - | chr4.3:87706930-87706949 | None:intergenic | 40.0% | |
| ACAGTGAAACGACCCAAATT+TGG | - | chr4.3:87703962-87703981 | None:intergenic | 40.0% | |
| ACATTCATAAAACGGGGCAA+GGG | + | chr4.3:87705052-87705071 | MS.gene65434:CDS | 40.0% | |
| ACTACTTATCGAACAGCTGA+TGG | + | chr4.3:87706529-87706548 | MS.gene65434:CDS | 40.0% | |
| AGATGCAAGCCAAAAAAGTG+TGG | + | chr4.3:87703308-87703327 | MS.gene65434:CDS | 40.0% | |
| ATCAGCTGTTCGATAAGTAG+TGG | - | chr4.3:87706530-87706549 | None:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | - | chr4.3:87705551-87705570 | None:intergenic | 40.0% | |
| CAACAAACTTGGTTCAACCA+AGG | + | chr4.3:87708067-87708086 | MS.gene65434:CDS | 40.0% | |
| CAACACAAATAGATGTCTGC+AGG | - | chr4.3:87707474-87707493 | None:intergenic | 40.0% | |
| CAGAGTGATGACAAGATCAA+GGG | + | chr4.3:87706781-87706800 | MS.gene65434:intron | 40.0% | |
| CCTAGACACAACATTAAAGC+AGG | - | chr4.3:87706061-87706080 | None:intergenic | 40.0% | |
| CCTGCTTTAATGTTGTGTCT+AGG | + | chr4.3:87706058-87706077 | MS.gene65434:intron | 40.0% | |
| CTTTCGAGATGAGAGTTTGA+AGG | + | chr4.3:87704143-87704162 | MS.gene65434:CDS | 40.0% | |
| GAAATCATGCTCAACCACAA+AGG | - | chr4.3:87707748-87707767 | None:intergenic | 40.0% | |
| GAACCAACCTGAATAAAAGG+AGG | - | chr4.3:87706338-87706357 | None:intergenic | 40.0% | |
| GATTGGGATTTGTGAGTGTT+TGG | + | chr4.3:87704551-87704570 | MS.gene65434:intron | 40.0% | |
| GGAAAGTTGGAGCCAAATTT+GGG | + | chr4.3:87703947-87703966 | MS.gene65434:CDS | 40.0% | |
| GGAAGTAGAGCTGTCAAAAA+TGG | - | chr4.3:87707354-87707373 | None:intergenic | 40.0% | |
| GGTATGTTGTGGTTGTGATT+GGG | + | chr4.3:87704535-87704554 | MS.gene65434:intron | 40.0% | |
| GGTCATTGCTAAGGCATAAT+AGG | + | chr4.3:87705307-87705326 | MS.gene65434:CDS | 40.0% | |
| GGTTGAGCATGATTTCATCA+TGG | + | chr4.3:87707752-87707771 | MS.gene65434:CDS | 40.0% | |
| GTGTCTTTGTCCAAATTCTC+CGG | - | chr4.3:87703699-87703718 | None:intergenic | 40.0% | |
| GTTATCTTGATGTGAGACAG+AGG | + | chr4.3:87705262-87705281 | MS.gene65434:CDS | 40.0% | |
| GTTGACATTGACATTAGCTG+GGG | + | chr4.3:87704514-87704533 | MS.gene65434:intron | 40.0% | |
| TAAAAGACCAAACTTCGACC+TGG | - | chr4.3:87706742-87706761 | None:intergenic | 40.0% | |
| TATCAACTTGCCGGAGAATT+TGG | + | chr4.3:87703686-87703705 | MS.gene65434:CDS | 40.0% | |
| TATCTCCTACCTCCCATTTA+TGG | + | chr4.3:87705653-87705672 | MS.gene65434:intron | 40.0% | |
| TCAGAGTGATGACAAGATCA+AGG | + | chr4.3:87706780-87706799 | MS.gene65434:intron | 40.0% | |
| TCGTCATAACCGGTATGATT+CGG | + | chr4.3:87703357-87703376 | MS.gene65434:intron | 40.0% | |
| TGAACACGATCTTAGTGTCT+TGG | + | chr4.3:87705460-87705479 | MS.gene65434:CDS | 40.0% | |
| TGCAAAGAAAACAGCCTTTG+TGG | + | chr4.3:87707731-87707750 | MS.gene65434:CDS | 40.0% | |
| TGCAGCAATAATACGCTGTT+CGG | - | chr4.3:87707685-87707704 | None:intergenic | 40.0% | |
| TGGAAAGTTGGAGCCAAATT+TGG | + | chr4.3:87703946-87703965 | MS.gene65434:CDS | 40.0% | |
| TGGCCCATATAAAAAAGGAC+CGG | - | chr4.3:87706885-87706904 | None:intergenic | 40.0% | |
| TGTTATGGATGTGCATCAAC+CGG | + | chr4.3:87706839-87706858 | MS.gene65434:intron | 40.0% | |
| TTGAAACCTGACACTATAGG+TGG | + | chr4.3:87706359-87706378 | MS.gene65434:CDS | 40.0% | |
| ! | AAGCTTTTGCTCTCTATCCT+TGG | - | chr4.3:87708087-87708106 | None:intergenic | 40.0% |
| ! | ATAGAGAGCAAAAGCTTGCT+GGG | + | chr4.3:87708090-87708109 | MS.gene65434:CDS | 40.0% |
| ! | GTTGTTATGCTTGGTGAGAA+TGG | + | chr4.3:87706209-87706228 | MS.gene65434:CDS | 40.0% |
| ! | TTCACCACCTCCTTTTATTC+AGG | + | chr4.3:87706328-87706347 | MS.gene65434:intron | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | + | chr4.3:87705165-87705184 | MS.gene65434:CDS | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | + | chr4.3:87705162-87705181 | MS.gene65434:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | - | chr4.3:87706139-87706158 | None:intergenic | 40.0% |
| !! | CTTGGTTTGGTTGGGAAAAA+TGG | + | chr4.3:87703890-87703909 | MS.gene65434:CDS | 40.0% |
| !! | GAACCAAGTTTGTTGATCCT+TGG | - | chr4.3:87708062-87708081 | None:intergenic | 40.0% |
| !! | TCGTAGAACCGTAATGGATA+AGG | - | chr4.3:87707445-87707464 | None:intergenic | 40.0% |
| !!! | ATAGGCCATATTTTTGGGCT+GGG | - | chr4.3:87706967-87706986 | None:intergenic | 40.0% |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | - | chr4.3:87706905-87706924 | None:intergenic | 40.0% |
| AAAATTTCCTGCCAGTCAGG+AGG | - | chr4.3:87704081-87704100 | None:intergenic | 45.0% | |
| AAACATGTCTGTCCACTCCA+CGG | - | chr4.3:87704017-87704036 | None:intergenic | 45.0% | |
| AAAGACACAACGAAGCCAAG+AGG | - | chr4.3:87707525-87707544 | None:intergenic | 45.0% | |
| AAATTTCCTGCCAGTCAGGA+GGG | - | chr4.3:87704080-87704099 | None:intergenic | 45.0% | |
| AAGTTCAGGCTTCGTGTAGT+TGG | + | chr4.3:87706161-87706180 | MS.gene65434:CDS | 45.0% | |
| AAGTTGTCCGGTCATTGCTA+AGG | + | chr4.3:87705298-87705317 | MS.gene65434:CDS | 45.0% | |
| ACATCCAGTGCACAATTCCT+CGG | - | chr4.3:87703522-87703541 | None:intergenic | 45.0% | |
| ACATTAGCTGGGGTATGTTG+TGG | + | chr4.3:87704524-87704543 | MS.gene65434:intron | 45.0% | |
| ACGCGTATTGCCATTGTCAA+TGG | + | chr4.3:87703281-87703300 | MS.gene65434:CDS | 45.0% | |
| ATCAATCTCAGCGCCCAAAT+TGG | - | chr4.3:87705688-87705707 | None:intergenic | 45.0% | |
| ATCCAACTAATTTCCGCCCA+AGG | + | chr4.3:87708042-87708061 | MS.gene65434:CDS | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | - | chr4.3:87708047-87708066 | None:intergenic | 45.0% | |
| CAAACTTCGACCTGGCATAA+AGG | - | chr4.3:87706734-87706753 | None:intergenic | 45.0% | |
| CAACAGCAATGGCAAACCTT+TGG | - | chr4.3:87705197-87705216 | None:intergenic | 45.0% | |
| CACATTCATAAAACGGGGCA+AGG | + | chr4.3:87705051-87705070 | MS.gene65434:CDS | 45.0% | |
| CACTATAGGTGGATCTGATG+TGG | + | chr4.3:87706370-87706389 | MS.gene65434:CDS | 45.0% | |
| CAGGGCAGACACTAGAATTA+AGG | - | chr4.3:87706669-87706688 | None:intergenic | 45.0% | |
| CCAAAACTCAAGGCAAGTTC+AGG | + | chr4.3:87706147-87706166 | MS.gene65434:CDS | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | + | chr4.3:87706137-87706156 | MS.gene65434:CDS | 45.0% | |
| CCAACCTGAATAAAAGGAGG+TGG | - | chr4.3:87706335-87706354 | None:intergenic | 45.0% | |
| CTACTGTCGTAGAACCGTAA+TGG | - | chr4.3:87707451-87707470 | None:intergenic | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | + | chr4.3:87705545-87705564 | MS.gene65434:CDS | 45.0% | |
| CTTTATGCCAGGTCGAAGTT+TGG | + | chr4.3:87706732-87706751 | MS.gene65434:intron | 45.0% | |
| GAAGATTGCTTACCTATCCG+AGG | + | chr4.3:87703502-87703521 | MS.gene65434:CDS | 45.0% | |
| GACAACATTCATCCGTATGC+TGG | + | chr4.3:87706241-87706260 | MS.gene65434:CDS | 45.0% | |
| GATAGAGAGCAAAAGCTTGC+TGG | + | chr4.3:87708089-87708108 | MS.gene65434:CDS | 45.0% | |
| GCATCTGTCTCCATTGACAA+TGG | - | chr4.3:87703294-87703313 | None:intergenic | 45.0% | |
| GGATGACTCTCTTACCTTCA+AGG | + | chr4.3:87705619-87705638 | MS.gene65434:CDS | 45.0% | |
| GGCCCATATAAAAAAGGACC+GGG | - | chr4.3:87706884-87706903 | None:intergenic | 45.0% | |
| GGGTATGTTGTGGTTGTGAT+TGG | + | chr4.3:87704534-87704553 | MS.gene65434:intron | 45.0% | |
| GTCAAAATTTCCTGCCAGTC+AGG | - | chr4.3:87704084-87704103 | None:intergenic | 45.0% | |
| GTTCTGCAAACCAAAAGCAG+AGG | - | chr4.3:87704058-87704077 | None:intergenic | 45.0% | |
| TAAATGTCTGCAGGCTGTTG+TGG | - | chr4.3:87707630-87707649 | None:intergenic | 45.0% | |
| TAGCAATGACCGGACAACTT+GGG | - | chr4.3:87705298-87705317 | None:intergenic | 45.0% | |
| TATGGAACACCTGGTGCATA+TGG | + | chr4.3:87705512-87705531 | MS.gene65434:CDS | 45.0% | |
| TCAGATCCACCTATAGTGTC+AGG | - | chr4.3:87706368-87706387 | None:intergenic | 45.0% | |
| TCGGAATCAAGATGTGCACT+TGG | - | chr4.3:87707666-87707685 | None:intergenic | 45.0% | |
| TGAGCTTCAGCAGTTTCATG+TGG | - | chr4.3:87706095-87706114 | None:intergenic | 45.0% | |
| TTAGCAATGACCGGACAACT+TGG | - | chr4.3:87705299-87705318 | None:intergenic | 45.0% | |
| ! | ACTGCATTCACCTCTGCTTT+TGG | + | chr4.3:87704045-87704064 | MS.gene65434:intron | 45.0% |
| ! | AGCCAAAATTCTAAGGGCAG+TGG | - | chr4.3:87703927-87703946 | None:intergenic | 45.0% |
| ! | ATCATACCGGTTATGACGAC+AGG | - | chr4.3:87703356-87703375 | None:intergenic | 45.0% |
| ! | CAAGCCAAAAAAGTGTGGAC+AGG | + | chr4.3:87703313-87703332 | MS.gene65434:CDS | 45.0% |
| ! | CCACCTCCTTTTATTCAGGT+TGG | + | chr4.3:87706332-87706351 | MS.gene65434:intron | 45.0% |
| ! | CCTGAACTTGCCTTGAGTTT+TGG | - | chr4.3:87706150-87706169 | None:intergenic | 45.0% |
| ! | GTCCACTGCCCTTAGAATTT+TGG | + | chr4.3:87703922-87703941 | MS.gene65434:CDS | 45.0% |
| ! | TATATGGGCCAAATGGGCTT+GGG | + | chr4.3:87706894-87706913 | MS.gene65434:intron | 45.0% |
| ! | TATGCTTGGTGAGAATGGGA+CGG | + | chr4.3:87706214-87706233 | MS.gene65434:CDS | 45.0% |
| ! | TCATACCGGTTATGACGACA+GGG | - | chr4.3:87703355-87703374 | None:intergenic | 45.0% |
| ! | TGCTGTTTGTATGGAACACC+TGG | + | chr4.3:87705503-87705522 | MS.gene65434:CDS | 45.0% |
| ! | TTATATGGGCCAAATGGGCT+TGG | + | chr4.3:87706893-87706912 | MS.gene65434:intron | 45.0% |
| !! | ACTGCCCTTAGAATTTTGGC+TGG | + | chr4.3:87703926-87703945 | MS.gene65434:CDS | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | - | chr4.3:87708058-87708077 | None:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | - | chr4.3:87706140-87706159 | None:intergenic | 45.0% |
| !! | CTTGCCTTGAGTTTTGGTCA+TGG | - | chr4.3:87706144-87706163 | None:intergenic | 45.0% |
| !! | GGAAAGTGCTTGGTTTGGTT+GGG | + | chr4.3:87703882-87703901 | MS.gene65434:CDS | 45.0% |
| !!! | CACTCCTGTCCACACTTTTT+TGG | - | chr4.3:87703320-87703339 | None:intergenic | 45.0% |
| !!! | GATAGGCCATATTTTTGGGC+TGG | - | chr4.3:87706968-87706987 | None:intergenic | 45.0% |
| !!! | GGCCCGGTCCTTTTTTATAT+GGG | + | chr4.3:87706879-87706898 | MS.gene65434:intron | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | + | chr4.3:87706941-87706960 | MS.gene65434:intron | 45.0% |
| !!! | TAATTTTTTTTTTTACAAAT+TGG | + | chr4.3:87704276-87704295 | MS.gene65434:intron | 5.0% |
| !!! | TTCAATTATTTTAAAAATAA+TGG | - | chr4.3:87707911-87707930 | None:intergenic | 5.0% |
| ACCAAACCAAGCACTTTCCC+CGG | - | chr4.3:87703881-87703900 | None:intergenic | 50.0% | |
| ATCCCAGTCAGCAGTGATTG+TGG | - | chr4.3:87707846-87707865 | None:intergenic | 50.0% | |
| CAGTGCACAATTCCTCGGAT+AGG | - | chr4.3:87703517-87703536 | None:intergenic | 50.0% | |
| CGCCCAAGGATCAACAAACT+TGG | + | chr4.3:87708056-87708075 | MS.gene65434:CDS | 50.0% | |
| CTATCCGAGGAATTGTGCAC+TGG | + | chr4.3:87703515-87703534 | MS.gene65434:CDS | 50.0% | |
| CTGTCAAAAATGGGCCAGCT+GGG | - | chr4.3:87707344-87707363 | None:intergenic | 50.0% | |
| GAGGAATTGTGCACTGGATG+TGG | + | chr4.3:87703521-87703540 | MS.gene65434:CDS | 50.0% | |
| GGAGTGGACAGACATGTTTG+AGG | + | chr4.3:87704018-87704037 | MS.gene65434:intron | 50.0% | |
| GTTACGACTCCATATGCACC+AGG | - | chr4.3:87705524-87705543 | None:intergenic | 50.0% | |
| TCTCCACAATCACTGCTGAC+TGG | + | chr4.3:87707840-87707859 | MS.gene65434:CDS | 50.0% | |
| TGAAAGCTGCCCAAGTTGTC+CGG | + | chr4.3:87705286-87705305 | MS.gene65434:CDS | 50.0% | |
| TTCAGGCTTCGTGTAGTTGG+AGG | + | chr4.3:87706164-87706183 | MS.gene65434:CDS | 50.0% | |
| ! | ATGCTTGGTGAGAATGGGAC+GGG | + | chr4.3:87706215-87706234 | MS.gene65434:CDS | 50.0% |
| ! | CTCCACAATCACTGCTGACT+GGG | + | chr4.3:87707841-87707860 | MS.gene65434:CDS | 50.0% |
| !! | ATTATAGGTTGCCGGTTCCG+AGG | + | chr4.3:87703855-87703874 | MS.gene65434:intron | 50.0% |
| !! | GGGAAAGTGCTTGGTTTGGT+TGG | + | chr4.3:87703881-87703900 | MS.gene65434:CDS | 50.0% |
| !!! | CGGCCCGGTCCTTTTTTATA+TGG | + | chr4.3:87706878-87706897 | MS.gene65434:intron | 50.0% |
| AAAACGGGGCAAGGGAACGT+GGG | + | chr4.3:87705060-87705079 | MS.gene65434:CDS | 55.0% | |
| CGTTGCCCTGTCGTCATAAC+CGG | + | chr4.3:87703347-87703366 | MS.gene65434:CDS | 55.0% | |
| GCTGTCAAAAATGGGCCAGC+TGG | - | chr4.3:87707345-87707364 | None:intergenic | 55.0% | |
| GTTTGCAGAACCCTCCTGAC+TGG | + | chr4.3:87704067-87704086 | MS.gene65434:intron | 55.0% | |
| TAAAACGGGGCAAGGGAACG+TGG | + | chr4.3:87705059-87705078 | MS.gene65434:CDS | 55.0% | |
| TAGGAGGGCAGCAACAGCAA+TGG | - | chr4.3:87705208-87705227 | None:intergenic | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | + | chr4.3:87705178-87705197 | MS.gene65434:CDS | 55.0% | |
| !! | ACAGGTGCGCCTTTTAGCTG+TGG | + | chr4.3:87703754-87703773 | MS.gene65434:intron | 55.0% |
| !! | GGGCGCTGAGATTGATTGAG+TGG | + | chr4.3:87705692-87705711 | MS.gene65434:intron | 55.0% |
| !!! | CCATATTTTTGGGCTGGGCC+GGG | - | chr4.3:87706962-87706981 | None:intergenic | 55.0% |
| !!! | GCCATATTTTTGGGCTGGGC+CGG | - | chr4.3:87706963-87706982 | None:intergenic | 55.0% |
| AAAAATGGGCCAGCTGGGCC+GGG | - | chr4.3:87707339-87707358 | None:intergenic | 60.0% | |
| AAACGGGGCAAGGGAACGTG+GGG | + | chr4.3:87705061-87705080 | MS.gene65434:CDS | 60.0% | |
| CAAAAATGGGCCAGCTGGGC+CGG | - | chr4.3:87707340-87707359 | None:intergenic | 60.0% | |
| CCCGGCCCAGCCCAAAAATA+TGG | + | chr4.3:87706959-87706978 | MS.gene65434:intron | 60.0% | |
| !! | GCCGGGGAAAGTGCTTGGTT+TGG | + | chr4.3:87703877-87703896 | MS.gene65434:CDS | 60.0% |
| !!! | TTTTTAGGTCCCGGCCCAGC+TGG | + | chr4.3:87706950-87706969 | MS.gene65434:intron | 60.0% |
| ACTTTCCCCGGCCTCGGAAC+CGG | - | chr4.3:87703869-87703888 | None:intergenic | 65.0% | |
| CCAAGCACTTTCCCCGGCCT+CGG | - | chr4.3:87703875-87703894 | None:intergenic | 65.0% | |
| GCAGAACCCTCCTGACTGGC+AGG | + | chr4.3:87704071-87704090 | MS.gene65434:intron | 65.0% | |
| TGGCTCATCAGGCTTCGGGC+CGG | - | chr4.3:87707258-87707277 | None:intergenic | 65.0% | |
| !! | TAGGTTGCCGGTTCCGAGGC+CGG | + | chr4.3:87703859-87703878 | MS.gene65434:intron | 65.0% |
| !! | AGGTTGCCGGTTCCGAGGCC+GGG | + | chr4.3:87703860-87703879 | MS.gene65434:intron | 70.0% |
| !! | CCGAGGCCGGGGAAAGTGCT+TGG | + | chr4.3:87703872-87703891 | MS.gene65434:CDS | 70.0% |
| !! | GGTTGCCGGTTCCGAGGCCG+GGG | + | chr4.3:87703861-87703880 | MS.gene65434:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 87703278 | 87708136 | 87703278 | ID=MS.gene65434 |
| chr4.3 | mRNA | 87703278 | 87708136 | 87703278 | ID=MS.gene65434.t1;Parent=MS.gene65434 |
| chr4.3 | exon | 87703278 | 87703368 | 87703278 | ID=MS.gene65434.t1.exon1;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87703278 | 87703368 | 87703278 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87703471 | 87703556 | 87703471 | ID=MS.gene65434.t1.exon2;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87703471 | 87703556 | 87703471 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87703660 | 87703757 | 87703660 | ID=MS.gene65434.t1.exon3;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87703660 | 87703757 | 87703660 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87703862 | 87703979 | 87703862 | ID=MS.gene65434.t1.exon4;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87703862 | 87703979 | 87703862 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87704075 | 87704164 | 87704075 | ID=MS.gene65434.t1.exon5;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87704075 | 87704164 | 87704075 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87705024 | 87705328 | 87705024 | ID=MS.gene65434.t1.exon6;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87705024 | 87705328 | 87705024 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87705445 | 87705640 | 87705445 | ID=MS.gene65434.t1.exon7;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87705445 | 87705640 | 87705445 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87706080 | 87706262 | 87706080 | ID=MS.gene65434.t1.exon8;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87706080 | 87706262 | 87706080 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87706350 | 87706619 | 87706350 | ID=MS.gene65434.t1.exon9;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87706350 | 87706619 | 87706350 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87707636 | 87707881 | 87707636 | ID=MS.gene65434.t1.exon10;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87707636 | 87707881 | 87707636 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| chr4.3 | exon | 87708017 | 87708136 | 87708017 | ID=MS.gene65434.t1.exon11;Parent=MS.gene65434.t1 |
| chr4.3 | CDS | 87708017 | 87708136 | 87708017 | ID=cds.MS.gene65434.t1;Parent=MS.gene65434.t1 |
| Gene Sequence |
| Protein sequence |
