Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74655.t1 | XP_013451624.1 | 99.2 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 9.10E-137 | 496.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74655.t1 | Q01667 | 81.8 | 242 | 39 | 3 | 1 | 240 | 1 | 239 | 1.0e-112 | 407.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74655.t1 | A0A072U7I8 | 99.2 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 6.6e-137 | 496.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene74655 | 0.856093 | 4.06E-62 | -1.69E-46 |
| MS.gene049173 | MS.gene74655 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene74655 | 0.800873 | 1.18E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene74655 | 0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene74655 | 0.828699 | 7.78E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene74655 | -0.808681 | 2.75E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene74655 | 0.891082 | 5.50E-74 | -1.69E-46 |
| MS.gene049313 | MS.gene74655 | -0.803965 | 2.71E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene74655 | 0.886739 | 2.63E-72 | -1.69E-46 |
| MS.gene049633 | MS.gene74655 | 0.827306 | 1.68E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene74655 | 0.862132 | 6.29E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene74655 | 0.856316 | 3.49E-62 | -1.69E-46 |
| MS.gene050165 | MS.gene74655 | 0.878469 | 2.74E-69 | -1.69E-46 |
| MS.gene050170 | MS.gene74655 | 0.837035 | 6.59E-57 | -1.69E-46 |
| MS.gene050173 | MS.gene74655 | -0.832579 | 8.72E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene74655 | 0.812786 | 3.56E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene74655 | 0.863786 | 1.94E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene74655 | 0.860039 | 2.73E-63 | -1.69E-46 |
| MS.gene050444 | MS.gene74655 | 0.831264 | 1.84E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene74655 | 0.889134 | 3.18E-73 | -1.69E-46 |
| MS.gene050504 | MS.gene74655 | 0.892812 | 1.12E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene74655 | 0.856463 | 3.16E-62 | -1.69E-46 |
| MS.gene050577 | MS.gene74655 | 0.817311 | 3.52E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene74655 | 0.904785 | 8.53E-80 | -1.69E-46 |
| MS.gene050675 | MS.gene74655 | 0.853587 | 2.17E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene74655 | 0.856005 | 4.31E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene74655 | 0.828868 | 7.08E-55 | -1.69E-46 |
| MS.gene050832 | MS.gene74655 | -0.803499 | 3.39E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene74655 | 0.854484 | 1.19E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene74655 | 0.851283 | 9.82E-61 | -1.69E-46 |
| MS.gene050876 | MS.gene74655 | 0.886658 | 2.82E-72 | -1.69E-46 |
| MS.gene050904 | MS.gene74655 | 0.832289 | 1.03E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene74655 | 0.880886 | 3.79E-70 | -1.69E-46 |
| MS.gene05100 | MS.gene74655 | 0.818018 | 2.44E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene74655 | -0.804048 | 2.60E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene74655 | -0.820907 | 5.35E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene74655 | 0.839804 | 1.27E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene74655 | 0.842581 | 2.37E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene74655 | -0.820052 | 8.41E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene74655 | -0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene051367 | MS.gene74655 | -0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene74655 | 0.833689 | 4.62E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene74655 | 0.881602 | 2.10E-70 | -1.69E-46 |
| MS.gene051949 | MS.gene74655 | 0.876273 | 1.59E-68 | -1.69E-46 |
| MS.gene052129 | MS.gene74655 | -0.821264 | 4.43E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene74655 | 0.817184 | 3.76E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene74655 | 0.806833 | 6.79E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene74655 | 0.811836 | 5.74E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene74655 | 0.808188 | 3.50E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene74655 | 0.816482 | 5.41E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene74655 | 0.82727 | 1.72E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene74655 | 0.820556 | 6.44E-53 | -1.69E-46 |
| MS.gene053170 | MS.gene74655 | -0.808407 | 3.15E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene74655 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene74655 | 0.816315 | 5.89E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene74655 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene74655 | -0.816992 | 4.15E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene74655 | -0.819009 | 1.45E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene74655 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene74655 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene74655 | -0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene054555 | MS.gene74655 | -0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene74655 | 0.832294 | 1.03E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene74655 | 0.867385 | 1.42E-65 | -1.69E-46 |
| MS.gene05470 | MS.gene74655 | 0.839897 | 1.20E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene74655 | 0.911266 | 7.39E-83 | -1.69E-46 |
| MS.gene054959 | MS.gene74655 | -0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene055134 | MS.gene74655 | -0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene055204 | MS.gene74655 | -0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene74655 | 0.889072 | 3.36E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene74655 | 0.851658 | 7.69E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene74655 | 0.851291 | 9.77E-61 | -1.69E-46 |
| MS.gene055634 | MS.gene74655 | 0.818492 | 1.91E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene74655 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene74655 | 0.862182 | 6.07E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene74655 | 0.852245 | 5.24E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene74655 | 0.889982 | 1.49E-73 | -1.69E-46 |
| MS.gene055776 | MS.gene74655 | 0.928854 | 1.60E-92 | -1.69E-46 |
| MS.gene055849 | MS.gene74655 | 0.830415 | 2.97E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene74655 | 0.863334 | 2.68E-64 | -1.69E-46 |
| MS.gene055942 | MS.gene74655 | -0.865027 | 7.95E-65 | -1.69E-46 |
| MS.gene056046 | MS.gene74655 | 0.815703 | 8.07E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene74655 | 0.807905 | 4.02E-50 | -1.69E-46 |
| MS.gene056405 | MS.gene74655 | 0.841378 | 4.93E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene74655 | 0.903132 | 4.76E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene74655 | 0.87812 | 3.63E-69 | -1.69E-46 |
| MS.gene056607 | MS.gene74655 | 0.830719 | 2.51E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene74655 | 0.886338 | 3.73E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene74655 | 0.813681 | 2.26E-51 | -1.69E-46 |
| MS.gene056761 | MS.gene74655 | -0.819095 | 1.39E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene74655 | -0.80595 | 1.04E-49 | -1.69E-46 |
| MS.gene056857 | MS.gene74655 | -0.812639 | 3.83E-51 | -1.69E-46 |
| MS.gene056910 | MS.gene74655 | 0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene74655 | -0.802569 | 5.27E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene74655 | 0.84158 | 4.36E-58 | -1.69E-46 |
| MS.gene058268 | MS.gene74655 | -0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene74655 | -0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene74655 | 0.865626 | 5.15E-65 | -1.69E-46 |
| MS.gene058544 | MS.gene74655 | 0.801458 | 8.92E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene74655 | 0.868554 | 5.99E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene74655 | 0.872364 | 3.37E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene74655 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene74655 | 0.919855 | 2.67E-87 | -1.69E-46 |
| MS.gene059023 | MS.gene74655 | 0.845568 | 3.74E-59 | -1.69E-46 |
| MS.gene059079 | MS.gene74655 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene74655 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene74655 | 0.838214 | 3.28E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene74655 | 0.896781 | 2.65E-76 | -1.69E-46 |
| MS.gene059701 | MS.gene74655 | -0.840294 | 9.48E-58 | -1.69E-46 |
| MS.gene059703 | MS.gene74655 | -0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene74655 | 0.848321 | 6.60E-60 | -1.69E-46 |
| MS.gene059837 | MS.gene74655 | 0.829884 | 4.01E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene74655 | 0.902862 | 6.28E-79 | -1.69E-46 |
| MS.gene06000 | MS.gene74655 | 0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene060337 | MS.gene74655 | -0.832124 | 1.13E-55 | -1.69E-46 |
| MS.gene060341 | MS.gene74655 | 0.801807 | 7.56E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene74655 | 0.907047 | 7.72E-81 | -1.69E-46 |
| MS.gene060762 | MS.gene74655 | 0.880008 | 7.81E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene74655 | 0.838307 | 3.11E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene74655 | 0.861335 | 1.10E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene74655 | 0.87625 | 1.62E-68 | -1.69E-46 |
| MS.gene061150 | MS.gene74655 | 0.824759 | 6.78E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74655.t1 | MTR_6g033320 | 99.174 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 4.77e-180 | 493 |
| MS.gene74655.t1 | MTR_4g015570 | 40.000 | 230 | 90 | 5 | 49 | 234 | 57 | 282 | 7.02e-45 | 152 |
| MS.gene74655.t1 | MTR_3g435460 | 37.594 | 266 | 121 | 9 | 1 | 238 | 1 | 249 | 1.51e-42 | 145 |
| MS.gene74655.t1 | MTR_8g023790 | 40.758 | 211 | 97 | 7 | 49 | 240 | 66 | 267 | 1.43e-41 | 143 |
| MS.gene74655.t1 | MTR_3g101670 | 39.048 | 210 | 100 | 6 | 49 | 238 | 61 | 262 | 1.62e-40 | 140 |
| MS.gene74655.t1 | MTR_2g042720 | 40.976 | 205 | 93 | 7 | 49 | 234 | 65 | 260 | 2.28e-40 | 140 |
| MS.gene74655.t1 | MTR_6g060175 | 38.743 | 191 | 107 | 3 | 56 | 238 | 91 | 279 | 2.20e-37 | 132 |
| MS.gene74655.t1 | MTR_4g094605 | 43.147 | 197 | 91 | 7 | 52 | 233 | 64 | 254 | 3.32e-36 | 129 |
| MS.gene74655.t1 | MTR_6g011880 | 42.487 | 193 | 91 | 6 | 56 | 233 | 66 | 253 | 3.45e-36 | 129 |
| MS.gene74655.t1 | MTR_6g011870 | 42.487 | 193 | 91 | 6 | 56 | 233 | 66 | 253 | 3.76e-36 | 129 |
| MS.gene74655.t1 | MTR_6g011890 | 42.487 | 193 | 91 | 6 | 56 | 233 | 66 | 253 | 3.96e-36 | 129 |
| MS.gene74655.t1 | MTR_3g435460 | 40.206 | 194 | 86 | 6 | 62 | 238 | 8 | 188 | 4.98e-36 | 126 |
| MS.gene74655.t1 | MTR_6g012110 | 41.969 | 193 | 92 | 6 | 56 | 233 | 66 | 253 | 7.67e-36 | 128 |
| MS.gene74655.t1 | MTR_5g098780 | 35.273 | 275 | 130 | 11 | 1 | 234 | 1 | 268 | 1.13e-35 | 128 |
| MS.gene74655.t1 | MTR_6g012080 | 41.969 | 193 | 92 | 6 | 56 | 233 | 66 | 253 | 1.23e-35 | 127 |
| MS.gene74655.t1 | MTR_5g097280 | 36.965 | 257 | 124 | 9 | 10 | 233 | 2 | 253 | 3.16e-35 | 126 |
| MS.gene74655.t1 | MTR_5g098785 | 37.903 | 248 | 117 | 9 | 16 | 234 | 31 | 270 | 4.55e-35 | 126 |
| MS.gene74655.t1 | MTR_1g026550 | 39.000 | 200 | 100 | 6 | 56 | 234 | 125 | 323 | 8.88e-34 | 124 |
| MS.gene74655.t1 | MTR_6g043600 | 40.860 | 186 | 84 | 6 | 56 | 233 | 50 | 217 | 8.24e-32 | 116 |
| MS.gene74655.t1 | MTR_3g070340 | 34.545 | 220 | 96 | 5 | 49 | 224 | 60 | 275 | 9.21e-31 | 115 |
| MS.gene74655.t1 | MTR_6g060175 | 36.126 | 191 | 102 | 4 | 56 | 238 | 91 | 269 | 3.78e-30 | 113 |
| MS.gene74655.t1 | MTR_2g081090 | 37.104 | 221 | 110 | 9 | 39 | 233 | 35 | 252 | 6.58e-30 | 112 |
| MS.gene74655.t1 | MTR_2g081090 | 38.860 | 193 | 100 | 8 | 56 | 233 | 36 | 225 | 8.85e-29 | 108 |
| MS.gene74655.t1 | MTR_2g008610 | 33.846 | 195 | 79 | 6 | 49 | 204 | 60 | 243 | 2.91e-21 | 89.7 |
| MS.gene74655.t1 | MTR_5g098770 | 54.412 | 68 | 29 | 2 | 168 | 234 | 21 | 87 | 4.00e-16 | 71.6 |
| MS.gene74655.t1 | MTR_2g436960 | 46.479 | 71 | 33 | 2 | 168 | 238 | 33 | 98 | 1.30e-12 | 62.8 |
| MS.gene74655.t1 | MTR_0003s0060 | 47.143 | 70 | 32 | 2 | 165 | 234 | 23 | 87 | 1.65e-11 | 59.3 |
| MS.gene74655.t1 | MTR_1g026550 | 41.176 | 85 | 43 | 2 | 56 | 133 | 125 | 209 | 3.53e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74655.t1 | AT3G54890 | 81.818 | 242 | 39 | 3 | 1 | 240 | 1 | 239 | 1.09e-138 | 389 |
| MS.gene74655.t1 | AT3G54890 | 79.899 | 199 | 35 | 3 | 1 | 197 | 1 | 196 | 1.29e-106 | 306 |
| MS.gene74655.t1 | AT3G54890 | 68.595 | 242 | 37 | 4 | 1 | 240 | 1 | 205 | 2.48e-105 | 303 |
| MS.gene74655.t1 | AT3G54890 | 73.292 | 161 | 37 | 4 | 1 | 158 | 1 | 158 | 3.74e-71 | 215 |
| MS.gene74655.t1 | AT3G47470 | 38.224 | 259 | 122 | 8 | 1 | 234 | 1 | 246 | 1.60e-46 | 155 |
| MS.gene74655.t1 | AT3G08940 | 37.218 | 266 | 115 | 7 | 16 | 234 | 20 | 280 | 2.62e-46 | 155 |
| MS.gene74655.t1 | AT5G01530 | 39.496 | 238 | 93 | 6 | 44 | 234 | 50 | 283 | 2.56e-44 | 150 |
| MS.gene74655.t1 | AT3G61470 | 38.400 | 250 | 120 | 9 | 15 | 240 | 17 | 256 | 1.81e-40 | 140 |
| MS.gene74655.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 47 | 239 | 47 | 252 | 2.57e-40 | 139 |
| MS.gene74655.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 47 | 239 | 47 | 252 | 2.57e-40 | 139 |
| MS.gene74655.t1 | AT2G34430 | 44.103 | 195 | 93 | 6 | 52 | 233 | 63 | 254 | 1.19e-38 | 135 |
| MS.gene74655.t1 | AT2G34420 | 44.103 | 195 | 93 | 6 | 52 | 233 | 62 | 253 | 1.39e-38 | 135 |
| MS.gene74655.t1 | AT2G40100 | 38.356 | 219 | 88 | 4 | 49 | 224 | 59 | 273 | 2.68e-38 | 135 |
| MS.gene74655.t1 | AT1G29930 | 43.455 | 191 | 93 | 5 | 56 | 233 | 67 | 255 | 3.03e-38 | 134 |
| MS.gene74655.t1 | AT1G29920 | 43.455 | 191 | 93 | 5 | 56 | 233 | 67 | 255 | 3.30e-38 | 134 |
| MS.gene74655.t1 | AT1G29910 | 43.455 | 191 | 93 | 5 | 56 | 233 | 67 | 255 | 3.30e-38 | 134 |
| MS.gene74655.t1 | AT4G10340 | 39.791 | 191 | 105 | 3 | 56 | 238 | 82 | 270 | 3.58e-38 | 134 |
| MS.gene74655.t1 | AT1G19150 | 39.512 | 205 | 96 | 7 | 49 | 234 | 68 | 263 | 6.45e-38 | 134 |
| MS.gene74655.t1 | AT2G05070 | 41.451 | 193 | 93 | 6 | 56 | 233 | 66 | 253 | 2.73e-35 | 127 |
| MS.gene74655.t1 | AT2G05100 | 41.451 | 193 | 93 | 6 | 56 | 233 | 66 | 253 | 3.17e-35 | 126 |
| MS.gene74655.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 56 | 233 | 99 | 286 | 2.83e-34 | 125 |
| MS.gene74655.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 56 | 233 | 67 | 254 | 3.33e-34 | 124 |
| MS.gene74655.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 49 | 234 | 56 | 266 | 1.59e-33 | 122 |
| MS.gene74655.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 49 | 234 | 56 | 266 | 1.59e-33 | 122 |
| MS.gene74655.t1 | AT1G76570 | 37.000 | 200 | 104 | 6 | 56 | 234 | 123 | 321 | 1.31e-32 | 121 |
| MS.gene74655.t1 | AT5G54270 | 35.521 | 259 | 135 | 10 | 1 | 233 | 1 | 253 | 1.73e-31 | 117 |
| MS.gene74655.t1 | AT1G61520 | 40.594 | 202 | 87 | 9 | 62 | 234 | 14 | 211 | 4.79e-30 | 112 |
| MS.gene74655.t1 | AT2G05100 | 39.645 | 169 | 83 | 5 | 56 | 209 | 66 | 230 | 1.19e-26 | 105 |
| MS.gene74655.t1 | AT1G15820 | 35.165 | 182 | 74 | 6 | 56 | 204 | 70 | 240 | 2.34e-20 | 87.4 |
| MS.gene74655.t1 | AT5G28450 | 53.333 | 75 | 32 | 3 | 168 | 240 | 99 | 172 | 1.97e-15 | 72.0 |
Find 70 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGGACCTTTGGAGAATT+TGG | 0.160780 | 6.3:-22825470 | MS.gene74655:CDS |
| ATGCATGCAGCCAGGGATTT+TGG | 0.196967 | 6.3:-22826281 | MS.gene74655:intron |
| GGGAACCCTACCCACCATTT+TGG | 0.273714 | 6.3:-22826161 | MS.gene74655:CDS |
| GGTAGGGTTCCCCATGGAAC+AGG | 0.309462 | 6.3:+22826172 | None:intergenic |
| CCTAGACCACCTTACCTTGA+TGG | 0.314069 | 6.3:-22828203 | MS.gene74655:CDS |
| TTCTCCAAAGGTCCAGTTCC+TGG | 0.317892 | 6.3:+22825475 | None:intergenic |
| CAAGAATGGGCAGCACTTCC+TGG | 0.319362 | 6.3:-22826220 | MS.gene74655:CDS |
| GGAGAATTTGGCAACTCATT+TGG | 0.330598 | 6.3:-22825458 | MS.gene74655:CDS |
| GTACCAGAGGCATTGGGATT+AGG | 0.338005 | 6.3:-22826259 | MS.gene74655:CDS |
| TGTTGAGCACCAAAGGAGTA+TGG | 0.346828 | 6.3:-22826113 | MS.gene74655:CDS |
| ATTAGGACGTCTTGCTTTGT+TGG | 0.354009 | 6.3:-22825533 | MS.gene74655:intron |
| GGTCTTTCTCCATACTCCTT+TGG | 0.357030 | 6.3:+22826104 | None:intergenic |
| TACCTTGATGGTTCAGCTCC+AGG | 0.367208 | 6.3:-22828191 | MS.gene74655:CDS |
| AGGCATTGGGATTAGGCAAC+TGG | 0.376763 | 6.3:-22826252 | MS.gene74655:CDS |
| AAGGAATTCAATGACCAAAA+TGG | 0.388111 | 6.3:+22826147 | None:intergenic |
| AGGTAGGTTGCTTGTCCTCC+AGG | 0.409848 | 6.3:+22826202 | None:intergenic |
| GATTCACCATGACTTCTGAT+TGG | 0.414343 | 6.3:-22828238 | MS.gene74655:CDS |
| CCATCAAGGTAAGGTGGTCT+AGG | 0.434279 | 6.3:+22828203 | None:intergenic |
| TTGAATCTCTCAAGATTCTC+AGG | 0.437523 | 6.3:+22826838 | None:intergenic |
| TTTGAGGGAGATATCTATTG+TGG | 0.446679 | 6.3:+22825394 | None:intergenic |
| GGATTTGATCCTCTACGTCT+TGG | 0.447228 | 6.3:-22826868 | MS.gene74655:CDS |
| ATGACTTCTGATTGGATGCC+TGG | 0.463135 | 6.3:-22828230 | MS.gene74655:CDS |
| ACTGGGTAAAAGCACAAGAA+TGG | 0.468418 | 6.3:-22826234 | MS.gene74655:CDS |
| ATATCCAGGAACTGGACCTT+TGG | 0.468791 | 6.3:-22825479 | MS.gene74655:CDS |
| CTGAACTCATTCACTGCAGA+TGG | 0.472063 | 6.3:-22826810 | MS.gene74655:CDS |
| CCCATGGAACAGGGTTTCCT+AGG | 0.476532 | 6.3:+22826182 | None:intergenic |
| CCTAGGAAACCCTGTTCCAT+GGG | 0.483167 | 6.3:-22826182 | MS.gene74655:CDS |
| ACCTTGATGGTTCAGCTCCA+GGG | 0.491528 | 6.3:-22828190 | MS.gene74655:intron |
| TTGAGGGAGATATCTATTGT+GGG | 0.492801 | 6.3:+22825395 | None:intergenic |
| CTGGGTAAAAGCACAAGAAT+GGG | 0.495394 | 6.3:-22826233 | MS.gene74655:CDS |
| CAAACAGCATATCCAGGAAC+TGG | 0.497647 | 6.3:-22825487 | MS.gene74655:CDS |
| ACCTAGGAAACCCTGTTCCA+TGG | 0.497834 | 6.3:-22826183 | MS.gene74655:CDS |
| GCTCAACAAAAGCAATAGAA+AGG | 0.508788 | 6.3:+22826128 | None:intergenic |
| GCCTCTGGTACCAAAATCCC+TGG | 0.509037 | 6.3:+22826271 | None:intergenic |
| GTAGAAGCAGTGCAAGGAAG+TGG | 0.511752 | 6.3:+22828275 | None:intergenic |
| TTGCCTAATCCCAATGCCTC+TGG | 0.512790 | 6.3:+22826256 | None:intergenic |
| TTTGAGGAAGAAAGAAGTGA+TGG | 0.520641 | 6.3:+22828320 | None:intergenic |
| TGGAACAGGGTTTCCTAGGT+AGG | 0.521985 | 6.3:+22826186 | None:intergenic |
| CAACTCATTTGGCTGATCCA+TGG | 0.522312 | 6.3:-22825447 | MS.gene74655:CDS |
| TTTCCAATGTTGTTGTGCCA+TGG | 0.523601 | 6.3:+22825430 | None:intergenic |
| CAATGACCAAAATGGTGGGT+AGG | 0.530752 | 6.3:+22826155 | None:intergenic |
| GATCCATGGCACAACAACAT+TGG | 0.533754 | 6.3:-22825433 | MS.gene74655:CDS |
| TGAGGGAGATATCTATTGTG+GGG | 0.534800 | 6.3:+22825396 | None:intergenic |
| AAAATCAAAGAAGTTAAGAA+TGG | 0.539315 | 6.3:-22826004 | MS.gene74655:intron |
| AATGACCAAAATGGTGGGTA+GGG | 0.541785 | 6.3:+22826156 | None:intergenic |
| GTAGGGTTCCCCATGGAACA+GGG | 0.556039 | 6.3:+22826173 | None:intergenic |
| AAAGGATCAAAAGCACCACC+AGG | 0.562866 | 6.3:+22826064 | None:intergenic |
| TAAGGTGGTCTAGGCTGACC+AGG | 0.567668 | 6.3:+22828212 | None:intergenic |
| GGAGGACAAGCAACCTACCT+AGG | 0.568993 | 6.3:-22826199 | MS.gene74655:CDS |
| GAATTCAATGACCAAAATGG+TGG | 0.574206 | 6.3:+22826150 | None:intergenic |
| GATACTTACAACAGCAAGCA+TGG | 0.578696 | 6.3:+22826786 | None:intergenic |
| AGGCATCCAATCAGAAGTCA+TGG | 0.583801 | 6.3:+22828232 | None:intergenic |
| GGAGCTGAACCATCAAGGTA+AGG | 0.587136 | 6.3:+22828194 | None:intergenic |
| GAGGGAGATATCTATTGTGG+GGG | 0.587909 | 6.3:+22825397 | None:intergenic |
| TGAACTCATTCACTGCAGAT+GGG | 0.591140 | 6.3:-22826809 | MS.gene74655:CDS |
| ACCCTGGAGCTGAACCATCA+AGG | 0.592237 | 6.3:+22828189 | None:intergenic |
| GTTCAACAAACAGCATATCC+AGG | 0.600057 | 6.3:-22825493 | MS.gene74655:CDS |
| GGCATTGGGATTAGGCAACT+GGG | 0.605198 | 6.3:-22826251 | MS.gene74655:CDS |
| GGGTCTTTAGAGTATCCCAA+AGG | 0.632066 | 6.3:+22826046 | None:intergenic |
| AATTCAATGACCAAAATGGT+GGG | 0.634135 | 6.3:+22826151 | None:intergenic |
| TGAGTTGCCAAATTCTCCAA+AGG | 0.636906 | 6.3:+22825463 | None:intergenic |
| GCATTTGTAGAAGCAGTGCA+AGG | 0.637996 | 6.3:+22828269 | None:intergenic |
| GCTGAACCATCAAGGTAAGG+TGG | 0.647312 | 6.3:+22828197 | None:intergenic |
| GGTACTTCACCAAGACGTAG+AGG | 0.665865 | 6.3:+22826859 | None:intergenic |
| ATGGTGGGTAGGGTTCCCCA+TGG | 0.665899 | 6.3:+22826166 | None:intergenic |
| CCTGAAAAGAAGAAATACCC+TGG | 0.684859 | 6.3:-22826082 | MS.gene74655:CDS |
| GAATGGGCAGCACTTCCTGG+AGG | 0.696246 | 6.3:-22826217 | MS.gene74655:CDS |
| AAGGATCAAAAGCACCACCA+GGG | 0.706196 | 6.3:+22826065 | None:intergenic |
| CTAGGAAACCCTGTTCCATG+GGG | 0.721785 | 6.3:-22826181 | MS.gene74655:CDS |
| GAAAAGAAGAAATACCCTGG+TGG | 0.755288 | 6.3:-22826079 | MS.gene74655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTATTTTTTTTGAAG+AGG | - | chr6.3:22825779-22825798 | MS.gene74655:intron | 10.0% |
| !!! | TTATTTCATTGTAAATTTTT+TGG | + | chr6.3:22826283-22826302 | None:intergenic | 10.0% |
| !!! | AAATAAGTTTAGTTTTCTTT+TGG | - | chr6.3:22827020-22827039 | MS.gene74655:intron | 15.0% |
| !!! | TTTTTTTTGTGATTATGATA+TGG | - | chr6.3:22826839-22826858 | MS.gene74655:CDS | 15.0% |
| !! | AAAATCAAAGAAGTTAAGAA+TGG | - | chr6.3:22827766-22827785 | MS.gene74655:intron | 20.0% |
| !! | AACATATCTATATCTATCTT+AGG | + | chr6.3:22827824-22827843 | None:intergenic | 20.0% |
| !! | AATATAATACCACATCAAAA+AGG | - | chr6.3:22825811-22825830 | MS.gene74655:intron | 20.0% |
| !! | ACACTTCTATATTATAAGTA+TGG | - | chr6.3:22826535-22826554 | MS.gene74655:intron | 20.0% |
| !! | CATTTATATCAATAACATGA+CGG | - | chr6.3:22826353-22826372 | MS.gene74655:intron | 20.0% |
| !! | TAAATTCGACAACATTTAAA+TGG | + | chr6.3:22828134-22828153 | None:intergenic | 20.0% |
| !! | TGACATGTTAGAATATTAAA+AGG | + | chr6.3:22825746-22825765 | None:intergenic | 20.0% |
| !!! | ATGTTATTTGAACATCAATA+TGG | + | chr6.3:22828162-22828181 | None:intergenic | 20.0% |
| !!! | CAATTTTCTTAACCAAATAA+AGG | + | chr6.3:22826624-22826643 | None:intergenic | 20.0% |
| !!! | GTAAATTTTTTGGTTTAGTT+TGG | + | chr6.3:22826273-22826292 | None:intergenic | 20.0% |
| !!! | TTGTTTTCAATATCGATATT+AGG | - | chr6.3:22827183-22827202 | MS.gene74655:intron | 20.0% |
| !!! | TTTTATCAATTCAGTTATCT+TGG | + | chr6.3:22826190-22826209 | None:intergenic | 20.0% |
| ! | ATTTGAATACCTGAAAATCA+TGG | - | chr6.3:22828022-22828041 | MS.gene74655:intron | 25.0% |
| ! | CTTTGTTGAATGTTTGTATT+AGG | - | chr6.3:22828220-22828239 | MS.gene74655:CDS | 25.0% |
| ! | GTTAAGAAAATTGAAGTTGT+CGG | - | chr6.3:22826631-22826650 | MS.gene74655:intron | 25.0% |
| ! | TAACCAAATAAAGGTCTATA+AGG | + | chr6.3:22826615-22826634 | None:intergenic | 25.0% |
| ! | TTTCAATATCGATATTAGGT+AGG | - | chr6.3:22827187-22827206 | MS.gene74655:intron | 25.0% |
| !! | AGTTGAAAATCTTGATTTTG+AGG | + | chr6.3:22825469-22825488 | None:intergenic | 25.0% |
| !! | TGTATTCATGGAACTTTTTA+GGG | + | chr6.3:22827747-22827766 | None:intergenic | 25.0% |
| !! | TTGTATTCATGGAACTTTTT+AGG | + | chr6.3:22827748-22827767 | None:intergenic | 25.0% |
| !!! | CTTCTTTGATTTTGTATTCA+TGG | + | chr6.3:22827759-22827778 | None:intergenic | 25.0% |
| AAATGACTTGAAGCTTCATA+AGG | - | chr6.3:22826208-22826227 | MS.gene74655:CDS | 30.0% | |
| AAGGAATTCAATGACCAAAA+TGG | + | chr6.3:22827626-22827645 | None:intergenic | 30.0% | |
| AATATCTAGACCGTTTGAAA+CGG | - | chr6.3:22827267-22827286 | MS.gene74655:intron | 30.0% | |
| AATTCAATGACCAAAATGGT+GGG | + | chr6.3:22827622-22827641 | None:intergenic | 30.0% | |
| ATAAATGCTCAGTTGTGTAT+TGG | + | chr6.3:22826340-22826359 | None:intergenic | 30.0% | |
| ATGGTGTATGAATAATGTTG+TGG | - | chr6.3:22826858-22826877 | MS.gene74655:CDS | 30.0% | |
| CAAATAACACCACCTTTAAA+GGG | - | chr6.3:22826425-22826444 | MS.gene74655:intron | 30.0% | |
| CATCCTTATAGACCTTTATT+TGG | - | chr6.3:22826609-22826628 | MS.gene74655:intron | 30.0% | |
| CTAGATCAAACAGTCTAAAT+CGG | - | chr6.3:22827291-22827310 | MS.gene74655:intron | 30.0% | |
| GAATGTATAAATACATACCC+TGG | + | chr6.3:22825600-22825619 | None:intergenic | 30.0% | |
| GTGATTGTTCGTTCAAAATA+TGG | - | chr6.3:22826661-22826680 | MS.gene74655:intron | 30.0% | |
| TAAACCTAGGTAGGTTTAAA+CGG | + | chr6.3:22827375-22827394 | None:intergenic | 30.0% | |
| TAATGTTACTGTTGATCTTG+TGG | + | chr6.3:22826482-22826501 | None:intergenic | 30.0% | |
| TATCAATTCAGTTATCTTGG+TGG | + | chr6.3:22826187-22826206 | None:intergenic | 30.0% | |
| TCGATATTAGGTAGGTTTAA+TGG | - | chr6.3:22827195-22827214 | MS.gene74655:intron | 30.0% | |
| TGAAAACAACTATGAAGTAC+TGG | + | chr6.3:22827172-22827191 | None:intergenic | 30.0% | |
| TTAGGTAGGTTTAATGGAAT+CGG | - | chr6.3:22827201-22827220 | MS.gene74655:intron | 30.0% | |
| TTATATCAATAACATGACGG+CGG | - | chr6.3:22826356-22826375 | MS.gene74655:intron | 30.0% | |
| TTCAGACTCTATCTGTATTT+AGG | + | chr6.3:22825871-22825890 | None:intergenic | 30.0% | |
| TTTATCCTTCATGTGGTTAA+AGG | + | chr6.3:22826029-22826048 | None:intergenic | 30.0% | |
| ! | TAGTTTGGAACTATATCCTT+AGG | + | chr6.3:22826258-22826277 | None:intergenic | 30.0% |
| ! | TTCTTTTCTTCTGTTTCCTT+TGG | + | chr6.3:22825931-22825950 | None:intergenic | 30.0% |
| ! | TTTTTGTGTTACAGTGACTT+TGG | - | chr6.3:22826881-22826900 | MS.gene74655:intron | 30.0% |
| !!! | CAGTGTATACTAGTTTTACA+CGG | - | chr6.3:22827131-22827150 | MS.gene74655:intron | 30.0% |
| ACCGTTAAATCAAAACCGTT+CGG | + | chr6.3:22827070-22827089 | None:intergenic | 35.0% | |
| ACCTCTCCTCATATTAATTG+AGG | - | chr6.3:22826761-22826780 | MS.gene74655:intron | 35.0% | |
| AGAGAGTTGAATTGTTGTAG+TGG | - | chr6.3:22825670-22825689 | MS.gene74655:intron | 35.0% | |
| ATTTCAAACGGTTCATCAGA+TGG | + | chr6.3:22827318-22827337 | None:intergenic | 35.0% | |
| CAAACGGTCTAGATTTCAAA+CGG | + | chr6.3:22827330-22827349 | None:intergenic | 35.0% | |
| CCTATACCCAGTATAGTAAA+CGG | - | chr6.3:22825956-22825975 | MS.gene74655:intron | 35.0% | |
| CCTCTCCTCATATTAATTGA+GGG | - | chr6.3:22826762-22826781 | MS.gene74655:intron | 35.0% | |
| CTCTCCTCATATTAATTGAG+GGG | - | chr6.3:22826763-22826782 | MS.gene74655:intron | 35.0% | |
| GAATTCAATGACCAAAATGG+TGG | + | chr6.3:22827623-22827642 | None:intergenic | 35.0% | |
| GCAAATAACACCACCTTTAA+AGG | - | chr6.3:22826424-22826443 | MS.gene74655:intron | 35.0% | |
| GCTCAACAAAAGCAATAGAA+AGG | + | chr6.3:22827645-22827664 | None:intergenic | 35.0% | |
| GTTAATCGCGTTCAAATTCA+CGG | - | chr6.3:22828044-22828063 | MS.gene74655:intron | 35.0% | |
| TTGAATCTCTCAAGATTCTC+AGG | + | chr6.3:22826935-22826954 | None:intergenic | 35.0% | |
| TTGATCTAGACCGTTTCAAA+CGG | + | chr6.3:22827280-22827299 | None:intergenic | 35.0% | |
| TTTCAAACGGTTCATCAGAT+GGG | + | chr6.3:22827317-22827336 | None:intergenic | 35.0% | |
| TTTCTCCTTTAACCACATGA+AGG | - | chr6.3:22826021-22826040 | MS.gene74655:CDS | 35.0% | |
| TTTGAGGAAGAAAGAAGTGA+TGG | + | chr6.3:22825453-22825472 | None:intergenic | 35.0% | |
| ! | ATCAATTTTCCGCATTCATG+CGG | + | chr6.3:22826725-22826744 | None:intergenic | 35.0% |
| ! | CTAGGAATACCTTTTTGATG+TGG | + | chr6.3:22825823-22825842 | None:intergenic | 35.0% |
| ! | TTTGGAACTATATCCTTAGG+TGG | + | chr6.3:22826255-22826274 | None:intergenic | 35.0% |
| ! | TTTTCTTCTGTTTCCTTTGG+TGG | + | chr6.3:22825928-22825947 | None:intergenic | 35.0% |
| !! | AAAAAGGTATTCCTAGCACA+AGG | - | chr6.3:22825827-22825846 | MS.gene74655:intron | 35.0% |
| !! | CAGGGTATTTCTTCTTTTCA+GGG | + | chr6.3:22827690-22827709 | None:intergenic | 35.0% |
| !! | GTATTTAGGTGTTACTTCCT+TGG | + | chr6.3:22825857-22825876 | None:intergenic | 35.0% |
| !! | GTTGTCGAATTTTAGTGTCA+CGG | + | chr6.3:22827861-22827880 | None:intergenic | 35.0% |
| !! | TAAAGGTGGTGTTATTTGCT+TGG | + | chr6.3:22826423-22826442 | None:intergenic | 35.0% |
| !!! | ACCGAACGGTTTTGATTTAA+CGG | - | chr6.3:22827066-22827085 | MS.gene74655:intron | 35.0% |
| AAAAAATTGCTCCGTTCAGC+AGG | + | chr6.3:22826071-22826090 | None:intergenic | 40.0% | |
| AAATGACCTGTAACAGAGAG+CGG | - | chr6.3:22826146-22826165 | MS.gene74655:CDS | 40.0% | |
| AACTATATCCTTAGGTGGCT+TGG | + | chr6.3:22826250-22826269 | None:intergenic | 40.0% | |
| AATGCTCAGTTGTGTATTGG+AGG | + | chr6.3:22826337-22826356 | None:intergenic | 40.0% | |
| AGCTCCCCTCAATTAATATG+AGG | + | chr6.3:22826770-22826789 | None:intergenic | 40.0% | |
| AGGTAGGTTTAAACGGTCAA+TGG | + | chr6.3:22827368-22827387 | None:intergenic | 40.0% | |
| AGTCTTTCTCTCAACTACCA+TGG | + | chr6.3:22825995-22826014 | None:intergenic | 40.0% | |
| ATCAAAACCGTTCGGTTTCA+CGG | + | chr6.3:22827062-22827081 | None:intergenic | 40.0% | |
| ATCCACACACACCTAAACTT+AGG | + | chr6.3:22826566-22826585 | None:intergenic | 40.0% | |
| ATGCTCAGTTGTGTATTGGA+GGG | + | chr6.3:22826336-22826355 | None:intergenic | 40.0% | |
| ATTAGGACGTCTTGCTTTGT+TGG | - | chr6.3:22828237-22828256 | MS.gene74655:CDS | 40.0% | |
| CACAGTCCGTTTACTATACT+GGG | + | chr6.3:22825965-22825984 | None:intergenic | 40.0% | |
| CCCTCAATTAATATGAGGAG+AGG | + | chr6.3:22826765-22826784 | None:intergenic | 40.0% | |
| CCGTTTACTATACTGGGTAT+AGG | + | chr6.3:22825959-22825978 | None:intergenic | 40.0% | |
| CCTGAAAAGAAGAAATACCC+TGG | - | chr6.3:22827688-22827707 | MS.gene74655:intron | 40.0% | |
| CGGTAAAGGTTGTCTTTAGT+CGG | - | chr6.3:22826376-22826395 | MS.gene74655:intron | 40.0% | |
| GAAAAGAAGAAATACCCTGG+TGG | - | chr6.3:22827691-22827710 | MS.gene74655:intron | 40.0% | |
| GATACTTACAACAGCAAGCA+TGG | + | chr6.3:22826987-22827006 | None:intergenic | 40.0% | |
| GATTCACCATGACTTCTGAT+TGG | - | chr6.3:22825532-22825551 | MS.gene74655:intron | 40.0% | |
| GCTGTTGAATCGAGATCAAA+CGG | - | chr6.3:22827234-22827253 | MS.gene74655:intron | 40.0% | |
| GGAGAATTTGGCAACTCATT+TGG | - | chr6.3:22828312-22828331 | MS.gene74655:CDS | 40.0% | |
| GTATGGACACTCCTAAGTTT+AGG | - | chr6.3:22826552-22826571 | MS.gene74655:intron | 40.0% | |
| GTTAACGCAGTTTACACGTA+TGG | + | chr6.3:22828112-22828131 | None:intergenic | 40.0% | |
| GTTCAACAAACAGCATATCC+AGG | - | chr6.3:22828277-22828296 | MS.gene74655:CDS | 40.0% | |
| TAAACCTACCTAGGTTTACG+TGG | - | chr6.3:22827377-22827396 | MS.gene74655:intron | 40.0% | |
| TAAATACTCCAAGCCACCTA+AGG | - | chr6.3:22826239-22826258 | MS.gene74655:CDS | 40.0% | |
| TGAACTCATTCACTGCAGAT+GGG | - | chr6.3:22826961-22826980 | MS.gene74655:intron | 40.0% | |
| TGAGTTGCCAAATTCTCCAA+AGG | + | chr6.3:22828310-22828329 | None:intergenic | 40.0% | |
| TTACATTATGCATGCAGCCA+GGG | - | chr6.3:22827482-22827501 | MS.gene74655:intron | 40.0% | |
| TTGACCGTTTAAACCTACCT+AGG | - | chr6.3:22827368-22827387 | MS.gene74655:intron | 40.0% | |
| TTTAAACGGTCAATGGCTGT+TGG | + | chr6.3:22827361-22827380 | None:intergenic | 40.0% | |
| TTTCACACACGAGGTTAACA+CGG | - | chr6.3:22827900-22827919 | MS.gene74655:intron | 40.0% | |
| TTTCCAATGTTGTTGTGCCA+TGG | + | chr6.3:22828343-22828362 | None:intergenic | 40.0% | |
| TTTCTCTCAACTACCATGGT+TGG | + | chr6.3:22825991-22826010 | None:intergenic | 40.0% | |
| ! | AACTGGACCTTTGGAGAATT+TGG | - | chr6.3:22828300-22828319 | MS.gene74655:CDS | 40.0% |
| ! | ACTGGGTAAAAGCACAAGAA+TGG | - | chr6.3:22827536-22827555 | MS.gene74655:intron | 40.0% |
| ! | CGCGATTAACCATGATTTTC+AGG | + | chr6.3:22828034-22828053 | None:intergenic | 40.0% |
| ! | CTGGGTAAAAGCACAAGAAT+GGG | - | chr6.3:22827537-22827556 | MS.gene74655:intron | 40.0% |
| ! | TCAAGGCTTTATCCTTCATG+TGG | + | chr6.3:22826036-22826055 | None:intergenic | 40.0% |
| !! | AATGACCAAAATGGTGGGTA+GGG | + | chr6.3:22827617-22827636 | None:intergenic | 40.0% |
| !! | CCAGGGTATTTCTTCTTTTC+AGG | + | chr6.3:22827691-22827710 | None:intergenic | 40.0% |
| !! | TTGCTTTTGTTGAGCACCAA+AGG | - | chr6.3:22827650-22827669 | MS.gene74655:intron | 40.0% |
| !!! | ATTTTGGTACCAGAGGCATT+GGG | - | chr6.3:22827505-22827524 | MS.gene74655:intron | 40.0% |
| !!! | CTTGCTTTGTTGGCTTTTGT+TGG | - | chr6.3:22828247-22828266 | MS.gene74655:CDS | 40.0% |
| AGGCATCCAATCAGAAGTCA+TGG | + | chr6.3:22825541-22825560 | None:intergenic | 45.0% | |
| AGTAACACGTTTCACACACG+AGG | - | chr6.3:22827891-22827910 | MS.gene74655:intron | 45.0% | |
| ATATCCAGGAACTGGACCTT+TGG | - | chr6.3:22828291-22828310 | MS.gene74655:CDS | 45.0% | |
| ATGACTTCTGATTGGATGCC+TGG | - | chr6.3:22825540-22825559 | MS.gene74655:intron | 45.0% | |
| ATTGCCACGTAAACCTAGGT+AGG | + | chr6.3:22827384-22827403 | None:intergenic | 45.0% | |
| CAAACAGCATATCCAGGAAC+TGG | - | chr6.3:22828283-22828302 | MS.gene74655:CDS | 45.0% | |
| CAACTCATTTGGCTGATCCA+TGG | - | chr6.3:22828323-22828342 | MS.gene74655:CDS | 45.0% | |
| CAATAACATGACGGCGGTAA+AGG | - | chr6.3:22826362-22826381 | MS.gene74655:intron | 45.0% | |
| CATGGTGTGGGAAATATGGA+AGG | + | chr6.3:22826119-22826138 | None:intergenic | 45.0% | |
| CTCCTAAGTTTAGGTGTGTG+TGG | - | chr6.3:22826561-22826580 | MS.gene74655:intron | 45.0% | |
| CTGAACTCATTCACTGCAGA+TGG | - | chr6.3:22826960-22826979 | MS.gene74655:intron | 45.0% | |
| CTTCCATATTTCCCACACCA+TGG | - | chr6.3:22826117-22826136 | MS.gene74655:CDS | 45.0% | |
| GATCCATGGCACAACAACAT+TGG | - | chr6.3:22828337-22828356 | MS.gene74655:CDS | 45.0% | |
| GCACAGTCCGTTTACTATAC+TGG | + | chr6.3:22825966-22825985 | None:intergenic | 45.0% | |
| GCATAAGGACGTCCCTTTAA+AGG | + | chr6.3:22826440-22826459 | None:intergenic | 45.0% | |
| GCATTTGTAGAAGCAGTGCA+AGG | + | chr6.3:22825504-22825523 | None:intergenic | 45.0% | |
| GCTCTCTGTTACAGGTCATT+TGG | + | chr6.3:22826147-22826166 | None:intergenic | 45.0% | |
| GCTGTTGGATCGAGATCAAA+CGG | + | chr6.3:22827346-22827365 | None:intergenic | 45.0% | |
| GGATTTGATCCTCTACGTCT+TGG | - | chr6.3:22826902-22826921 | MS.gene74655:intron | 45.0% | |
| GGTCTTTCTCCATACTCCTT+TGG | + | chr6.3:22827669-22827688 | None:intergenic | 45.0% | |
| GTTACATTATGCATGCAGCC+AGG | - | chr6.3:22827481-22827500 | MS.gene74655:intron | 45.0% | |
| TCACATTGCCACGTAAACCT+AGG | + | chr6.3:22827388-22827407 | None:intergenic | 45.0% | |
| TCGATTCAACAGCCATCGAT+GGG | + | chr6.3:22827227-22827246 | None:intergenic | 45.0% | |
| TCGGAAGCTTGTCACGAAAT+AGG | - | chr6.3:22826395-22826414 | MS.gene74655:intron | 45.0% | |
| TGCTGAAAGCAAACCACCAA+AGG | - | chr6.3:22825912-22825931 | MS.gene74655:intron | 45.0% | |
| TGTGTCTTCTCTGTGGCATA+AGG | + | chr6.3:22826455-22826474 | None:intergenic | 45.0% | |
| TGTTGAGCACCAAAGGAGTA+TGG | - | chr6.3:22827657-22827676 | MS.gene74655:intron | 45.0% | |
| TTATGCCACAGAGAAGACAC+AGG | - | chr6.3:22826454-22826473 | MS.gene74655:intron | 45.0% | |
| TTGCCATGGTGTGGGAAATA+TGG | + | chr6.3:22826123-22826142 | None:intergenic | 45.0% | |
| ! | ATTTTCCGCATTCATGCGGT+TGG | + | chr6.3:22826721-22826740 | None:intergenic | 45.0% |
| ! | GGTGGTGCTTTTGATCCTTT+GGG | - | chr6.3:22827709-22827728 | MS.gene74655:intron | 45.0% |
| ! | TAAGGACGTCCCTTTAAAGG+TGG | + | chr6.3:22826437-22826456 | None:intergenic | 45.0% |
| ! | TTTTCCGCATTCATGCGGTT+GGG | + | chr6.3:22826720-22826739 | None:intergenic | 45.0% |
| !! | AAAGGATCAAAAGCACCACC+AGG | + | chr6.3:22827709-22827728 | None:intergenic | 45.0% |
| !! | AAGGATCAAAAGCACCACCA+GGG | + | chr6.3:22827708-22827727 | None:intergenic | 45.0% |
| !! | ACAGGTCATTTGGTTTGCCA+TGG | + | chr6.3:22826137-22826156 | None:intergenic | 45.0% |
| !! | CAATGACCAAAATGGTGGGT+AGG | + | chr6.3:22827618-22827637 | None:intergenic | 45.0% |
| !! | CATTTGGTTTGCCATGGTGT+GGG | + | chr6.3:22826131-22826150 | None:intergenic | 45.0% |
| !! | GATTTTGGTACCAGAGGCAT+TGG | - | chr6.3:22827504-22827523 | MS.gene74655:intron | 45.0% |
| !! | GGGTCTTTAGAGTATCCCAA+AGG | + | chr6.3:22827727-22827746 | None:intergenic | 45.0% |
| !! | TCATTTGGTTTGCCATGGTG+TGG | + | chr6.3:22826132-22826151 | None:intergenic | 45.0% |
| !! | TGGTGGTGCTTTTGATCCTT+TGG | - | chr6.3:22827708-22827727 | MS.gene74655:intron | 45.0% |
| !!! | AAATAATTTTTAAAAGTTAA+AGG | - | chr6.3:22826803-22826822 | MS.gene74655:CDS | 5.0% |
| AAATTGCTCCGTTCAGCAGG+TGG | + | chr6.3:22826068-22826087 | None:intergenic | 50.0% | |
| ACCTAGGAAACCCTGTTCCA+TGG | - | chr6.3:22827587-22827606 | MS.gene74655:intron | 50.0% | |
| ATAGCCCAACCGCATGAATG+CGG | - | chr6.3:22826713-22826732 | MS.gene74655:intron | 50.0% | |
| CAGTTGTGTATTGGAGGGTG+TGG | + | chr6.3:22826331-22826350 | None:intergenic | 50.0% | |
| CCATCAAGGTAAGGTGGTCT+AGG | + | chr6.3:22825570-22825589 | None:intergenic | 50.0% | |
| CCTAGACCACCTTACCTTGA+TGG | - | chr6.3:22825567-22825586 | MS.gene74655:intron | 50.0% | |
| CCTAGGAAACCCTGTTCCAT+GGG | - | chr6.3:22827588-22827607 | MS.gene74655:intron | 50.0% | |
| CTAGGAAACCCTGTTCCATG+GGG | - | chr6.3:22827589-22827608 | MS.gene74655:intron | 50.0% | |
| CTAGTAGCCGTGAAACCGAA+CGG | - | chr6.3:22827052-22827071 | MS.gene74655:intron | 50.0% | |
| CTCGATTCAACAGCCATCGA+TGG | + | chr6.3:22827228-22827247 | None:intergenic | 50.0% | |
| CTCTCAACTACCATGGTTGG+TGG | + | chr6.3:22825988-22826007 | None:intergenic | 50.0% | |
| GCTGAACCATCAAGGTAAGG+TGG | + | chr6.3:22825576-22825595 | None:intergenic | 50.0% | |
| GGAGCTGAACCATCAAGGTA+AGG | + | chr6.3:22825579-22825598 | None:intergenic | 50.0% | |
| GGTACTTCACCAAGACGTAG+AGG | + | chr6.3:22826914-22826933 | None:intergenic | 50.0% | |
| GTAGAAGCAGTGCAAGGAAG+TGG | + | chr6.3:22825498-22825517 | None:intergenic | 50.0% | |
| GTTGGGCTATCAATGGTCGT+TGG | + | chr6.3:22826703-22826722 | None:intergenic | 50.0% | |
| TAATGGAATCGGCCCATCGA+TGG | - | chr6.3:22827212-22827231 | MS.gene74655:intron | 50.0% | |
| TCATGCGGTTGGGCTATCAA+TGG | + | chr6.3:22826710-22826729 | None:intergenic | 50.0% | |
| TGGAACAGGGTTTCCTAGGT+AGG | + | chr6.3:22827587-22827606 | None:intergenic | 50.0% | |
| TGTTCGACGTGTGTCGAACA+CGG | - | chr6.3:22826585-22826604 | MS.gene74655:intron | 50.0% | |
| TTCTCCAAAGGTCCAGTTCC+TGG | + | chr6.3:22828298-22828317 | None:intergenic | 50.0% | |
| TTGCCTAATCCCAATGCCTC+TGG | + | chr6.3:22827517-22827536 | None:intergenic | 50.0% | |
| TTTGTCCACCACCTGCTGAA+CGG | - | chr6.3:22826057-22826076 | MS.gene74655:CDS | 50.0% | |
| ! | ACCTTGATGGTTCAGCTCCA+GGG | - | chr6.3:22825580-22825599 | MS.gene74655:intron | 50.0% |
| ! | ATGCATGCAGCCAGGGATTT+TGG | - | chr6.3:22827489-22827508 | MS.gene74655:intron | 50.0% |
| ! | GGCATTGGGATTAGGCAACT+GGG | - | chr6.3:22827519-22827538 | MS.gene74655:intron | 50.0% |
| ! | TACCTTGATGGTTCAGCTCC+AGG | - | chr6.3:22825579-22825598 | MS.gene74655:intron | 50.0% |
| ! | TATTGGAGGGTGTGGTGAAG+AGG | + | chr6.3:22826323-22826342 | None:intergenic | 50.0% |
| !! | AGGCATTGGGATTAGGCAAC+TGG | - | chr6.3:22827518-22827537 | MS.gene74655:intron | 50.0% |
| !! | GCAGGTGGTGGACAAAATCA+AGG | + | chr6.3:22826053-22826072 | None:intergenic | 50.0% |
| !! | GTACCAGAGGCATTGGGATT+AGG | - | chr6.3:22827511-22827530 | MS.gene74655:intron | 50.0% |
| ACCCTGGAGCTGAACCATCA+AGG | + | chr6.3:22825584-22825603 | None:intergenic | 55.0% | |
| AGGTAGGTTGCTTGTCCTCC+AGG | + | chr6.3:22827571-22827590 | None:intergenic | 55.0% | |
| CAAGAATGGGCAGCACTTCC+TGG | - | chr6.3:22827550-22827569 | MS.gene74655:intron | 55.0% | |
| CCCATGGAACAGGGTTTCCT+AGG | + | chr6.3:22827591-22827610 | None:intergenic | 55.0% | |
| GCCTCTGGTACCAAAATCCC+TGG | + | chr6.3:22827502-22827521 | None:intergenic | 55.0% | |
| GGAGGACAAGCAACCTACCT+AGG | - | chr6.3:22827571-22827590 | MS.gene74655:intron | 55.0% | |
| GGTTAACACGGTGCGATCAG+TGG | - | chr6.3:22827912-22827931 | MS.gene74655:intron | 55.0% | |
| GTAGGGTTCCCCATGGAACA+GGG | + | chr6.3:22827600-22827619 | None:intergenic | 55.0% | |
| GTCTAGCCGCTCTCTGTTAC+AGG | + | chr6.3:22826155-22826174 | None:intergenic | 55.0% | |
| TAAGGTGGTCTAGGCTGACC+AGG | + | chr6.3:22825561-22825580 | None:intergenic | 55.0% | |
| TCCTAGCACAAGGTGTGCCA+AGG | - | chr6.3:22825837-22825856 | MS.gene74655:intron | 55.0% | |
| TCCTTGGCACACCTTGTGCT+AGG | + | chr6.3:22825841-22825860 | None:intergenic | 55.0% | |
| TGGTGCCTGTGTCTTCTCTG+TGG | + | chr6.3:22826462-22826481 | None:intergenic | 55.0% | |
| ! | GGGAACCCTACCCACCATTT+TGG | - | chr6.3:22827609-22827628 | MS.gene74655:intron | 55.0% |
| !! | GCCAGGGATTTTGGTACCAG+AGG | - | chr6.3:22827498-22827517 | MS.gene74655:intron | 55.0% |
| GAATGGGCAGCACTTCCTGG+AGG | - | chr6.3:22827553-22827572 | MS.gene74655:intron | 60.0% | |
| GGTAGGGTTCCCCATGGAAC+AGG | + | chr6.3:22827601-22827620 | None:intergenic | 60.0% | |
| TTGCTCCGTTCAGCAGGTGG+TGG | + | chr6.3:22826065-22826084 | None:intergenic | 60.0% | |
| ! | ACGGACTGTGCCACCAACCA+TGG | - | chr6.3:22825975-22825994 | MS.gene74655:intron | 60.0% |
| !! | ATGGTGGGTAGGGTTCCCCA+TGG | + | chr6.3:22827607-22827626 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 22825408 | 22828384 | 22825408 | ID=MS.gene74655 |
| chr6.3 | mRNA | 22825408 | 22828384 | 22825408 | ID=MS.gene74655.t1;Parent=MS.gene74655 |
| chr6.3 | exon | 22828191 | 22828384 | 22828191 | ID=MS.gene74655.t1.exon1;Parent=MS.gene74655.t1 |
| chr6.3 | CDS | 22828191 | 22828384 | 22828191 | ID=cds.MS.gene74655.t1;Parent=MS.gene74655.t1 |
| chr6.3 | exon | 22826795 | 22826897 | 22826795 | ID=MS.gene74655.t1.exon2;Parent=MS.gene74655.t1 |
| chr6.3 | CDS | 22826795 | 22826897 | 22826795 | ID=cds.MS.gene74655.t1;Parent=MS.gene74655.t1 |
| chr6.3 | exon | 22826005 | 22826293 | 22826005 | ID=MS.gene74655.t1.exon3;Parent=MS.gene74655.t1 |
| chr6.3 | CDS | 22826005 | 22826293 | 22826005 | ID=cds.MS.gene74655.t1;Parent=MS.gene74655.t1 |
| chr6.3 | exon | 22825408 | 22825550 | 22825408 | ID=MS.gene74655.t1.exon4;Parent=MS.gene74655.t1 |
| chr6.3 | CDS | 22825408 | 22825550 | 22825408 | ID=cds.MS.gene74655.t1;Parent=MS.gene74655.t1 |
| Gene Sequence |
| Protein sequence |
