Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054555.t1 | XP_013454559.1 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.00E+00 | 1104.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054555.t1 | Q8LPJ4 | 82.9 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 1.2e-295 | 1016.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054555.t1 | A0A072URT6 | 90.8 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0e+00 | 1104.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053170 | MS.gene054555 | 0.953506 | 2.36E-111 | -1.69E-46 |
| MS.gene054555 | MS.gene055134 | 0.811753 | 5.98E-51 | -1.69E-46 |
| MS.gene054555 | MS.gene37999 | -0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene054555 | MS.gene38250 | -0.806125 | 9.57E-50 | -1.69E-46 |
| MS.gene054555 | MS.gene38252 | -0.80503 | 1.63E-49 | -1.69E-46 |
| MS.gene054555 | MS.gene38348 | -0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene054555 | MS.gene41636 | -0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene054555 | MS.gene55899 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene054555 | MS.gene57132 | -0.814854 | 1.25E-51 | -1.69E-46 |
| MS.gene054555 | MS.gene65434 | 0.97653 | 5.30E-142 | -1.69E-46 |
| MS.gene054555 | MS.gene74655 | -0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene054555 | MS.gene80804 | -0.802787 | 4.75E-49 | -1.69E-46 |
| MS.gene054555 | MS.gene81275 | -0.813893 | 2.03E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054555.t1 | MTR_4g007890 | 90.833 | 600 | 55 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1129 |
| MS.gene054555.t1 | MTR_1g114170 | 87.209 | 602 | 75 | 2 | 1 | 600 | 5 | 606 | 0.0 | 1088 |
| MS.gene054555.t1 | MTR_1g025075 | 84.884 | 602 | 89 | 2 | 1 | 600 | 6 | 607 | 0.0 | 1061 |
| MS.gene054555.t1 | MTR_1g025075 | 84.932 | 511 | 75 | 2 | 92 | 600 | 17 | 527 | 0.0 | 894 |
| MS.gene054555.t1 | MTR_1g024860 | 75.092 | 542 | 113 | 5 | 3 | 542 | 8 | 529 | 0.0 | 823 |
| MS.gene054555.t1 | MTR_1g024860 | 26.693 | 251 | 133 | 7 | 370 | 595 | 104 | 328 | 9.56e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054555.t1 | AT4G19210 | 82.862 | 601 | 102 | 1 | 1 | 600 | 5 | 605 | 0.0 | 1043 |
| MS.gene054555.t1 | AT3G13640 | 74.043 | 601 | 153 | 2 | 1 | 600 | 5 | 603 | 0.0 | 939 |
| MS.gene054555.t1 | AT4G30300 | 64.571 | 175 | 60 | 2 | 350 | 522 | 1 | 175 | 1.99e-66 | 215 |
| MS.gene054555.t1 | AT4G30300 | 25.140 | 179 | 100 | 5 | 100 | 265 | 21 | 178 | 1.78e-11 | 63.9 |
Find 138 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAGTTGGAGCCAAATT+TGG | 0.165233 | 4.1:+87582553 | MS.gene054555:CDS |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 4.1:+87583770 | MS.gene054555:CDS |
| TATCAACTTGCCGGAGAATT+TGG | 0.186930 | 4.1:+87582293 | MS.gene054555:CDS |
| GTCCACTGCCCTTAGAATTT+TGG | 0.194239 | 4.1:+87582529 | MS.gene054555:CDS |
| TCATATCTCTCTCATTGTTT+TGG | 0.229197 | 4.1:-87583703 | None:intergenic |
| CCTGAACTTGCCTTGAGTTT+TGG | 0.246863 | 4.1:-87584755 | None:intergenic |
| ACTTTCCAGCCAAAATTCTA+AGG | 0.272957 | 4.1:-87582538 | None:intergenic |
| CAACAGAAAATCTTAGGTTT+CGG | 0.282822 | 4.1:+87584205 | MS.gene054555:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 4.1:+87584199 | MS.gene054555:CDS |
| ACAGTGAAACGACCCAAATT+TGG | 0.292894 | 4.1:-87582566 | None:intergenic |
| GATGAATTCTTTCATGTAAC+AGG | 0.293045 | 4.1:-87585071 | None:intergenic |
| TCATCACATCTGATATAAAC+TGG | 0.305491 | 4.1:-87585110 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.307649 | 4.1:+87584206 | MS.gene054555:CDS |
| GACTTTATTTGCTGTTTGTA+TGG | 0.317741 | 4.1:+87584102 | MS.gene054555:CDS |
| GGTCATTGCTAAGGCATAAT+AGG | 0.365075 | 4.1:+87583915 | MS.gene054555:CDS |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.366567 | 4.1:-87582342 | None:intergenic |
| GAACCAAGTTTGTTGATCCT+TGG | 0.372441 | 4.1:-87586669 | None:intergenic |
| AACCAAGTTTGTTGATCCTT+GGG | 0.373348 | 4.1:-87586668 | None:intergenic |
| CTTTCGAGATGAGAGTTTGA+AGG | 0.373390 | 4.1:+87582751 | MS.gene054555:CDS |
| TAACAGTTGATTTGAACTTT+GGG | 0.374527 | 4.1:-87585044 | None:intergenic |
| CTAACAGTTGATTTGAACTT+TGG | 0.376761 | 4.1:-87585045 | None:intergenic |
| CGCCCAAGGATCAACAAACT+TGG | 0.378870 | 4.1:+87586666 | MS.gene054555:CDS |
| CGTTGCCCTGTCGTCATAAC+CGG | 0.380336 | 4.1:+87581953 | MS.gene054555:CDS |
| GATAGAGAGCAAAAGCTTGC+TGG | 0.383710 | 4.1:+87586699 | MS.gene054555:CDS |
| TGTAGTTGGAGGAGAATTTA+CGG | 0.386210 | 4.1:+87584783 | MS.gene054555:CDS |
| ATTGATCACATTCATAAAAC+GGG | 0.386877 | 4.1:+87583653 | MS.gene054555:CDS |
| AATTAAGATTATCAACTTGC+CGG | 0.388066 | 4.1:+87582284 | MS.gene054555:CDS |
| GGAAAGTTGGAGCCAAATTT+GGG | 0.390741 | 4.1:+87582554 | MS.gene054555:CDS |
| GTCAAAATTTCCTGCCAGTC+AGG | 0.392453 | 4.1:-87582689 | None:intergenic |
| TGCAGCAATAATACGCTGTT+CGG | 0.396922 | 4.1:-87586292 | None:intergenic |
| TGACAGAGTTATTGTTTATG+AGG | 0.398914 | 4.1:+87586398 | MS.gene054555:CDS |
| CAACAGCAATGGCAAACCTT+TGG | 0.402310 | 4.1:-87583802 | None:intergenic |
| CCGAGGCCGGGGAAAGTGCT+TGG | 0.412378 | 4.1:+87582479 | MS.gene054555:CDS |
| ACTTTCCCCGGCCTCGGAAC+CGG | 0.412394 | 4.1:-87582473 | None:intergenic |
| GGGAAAGTGCTTGGTTTGGT+TGG | 0.414362 | 4.1:+87582488 | MS.gene054555:CDS |
| AGTTGTGTATTATAGGTTGC+CGG | 0.415419 | 4.1:+87582454 | MS.gene054555:intron |
| TATAATACAGGTTAGCTTCA+AGG | 0.416213 | 4.1:+87583622 | MS.gene054555:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.419970 | 4.1:-87586654 | None:intergenic |
| TGCAAAGAAAACAGCCTTTG+TGG | 0.420036 | 4.1:+87586341 | MS.gene054555:CDS |
| CCAAAACTCAAGGCAAGTTC+AGG | 0.420940 | 4.1:+87584755 | MS.gene054555:CDS |
| AGGTTGCCGGTTCCGAGGCC+GGG | 0.422004 | 4.1:+87582467 | MS.gene054555:intron |
| GCCGGGGAAAGTGCTTGGTT+TGG | 0.422861 | 4.1:+87582484 | MS.gene054555:CDS |
| GGAATTAATATCTTCTTGTC+TGG | 0.423856 | 4.1:+87584174 | MS.gene054555:CDS |
| ATAATCTTAATTGCTTCAAA+AGG | 0.425895 | 4.1:-87582273 | None:intergenic |
| GGAAAGTGCTTGGTTTGGTT+GGG | 0.426497 | 4.1:+87582489 | MS.gene054555:CDS |
| TATTGATCACATTCATAAAA+CGG | 0.431274 | 4.1:+87583652 | MS.gene054555:CDS |
| GTTTCCTTATGTCTTTGTCT+TGG | 0.432752 | 4.1:+87585201 | MS.gene054555:CDS |
| GGATGACTCTCTTACCTTCA+AGG | 0.434243 | 4.1:+87584227 | MS.gene054555:CDS |
| TAGGTTGCCGGTTCCGAGGC+CGG | 0.434876 | 4.1:+87582466 | MS.gene054555:intron |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 4.1:-87584156 | None:intergenic |
| ATAGATTATTTATACCTTGA+AGG | 0.440136 | 4.1:-87584241 | None:intergenic |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 4.1:+87583771 | MS.gene054555:CDS |
| TCTCCACAATCACTGCTGAC+TGG | 0.442692 | 4.1:+87586450 | MS.gene054555:CDS |
| TCTCAGATTGTTGTTATGCT+TGG | 0.451315 | 4.1:+87584808 | MS.gene054555:CDS |
| GTTGTTATGCTTGGTGAGAA+TGG | 0.453138 | 4.1:+87584817 | MS.gene054555:CDS |
| TGAACACGATCTTAGTGTCT+TGG | 0.458360 | 4.1:+87584068 | MS.gene054555:CDS |
| CTTATGTCTTTGTCTTGGAA+AGG | 0.458540 | 4.1:+87585206 | MS.gene054555:CDS |
| TGGATGTGGTATTTGTGTTA+AGG | 0.458616 | 4.1:+87582141 | MS.gene054555:CDS |
| AAAGACACCACTCATAGATA+TGG | 0.460544 | 4.1:+87582318 | MS.gene054555:CDS |
| GTTTGCAGAACCCTCCTGAC+TGG | 0.466184 | 4.1:+87582675 | MS.gene054555:intron |
| CTCCACAATCACTGCTGACT+GGG | 0.473425 | 4.1:+87586451 | MS.gene054555:CDS |
| GCAGAACCCTCCTGACTGGC+AGG | 0.473883 | 4.1:+87582679 | MS.gene054555:intron |
| TATGGAACACCTGGTGCATA+TGG | 0.475475 | 4.1:+87584120 | MS.gene054555:CDS |
| ACGCGTATTGCCATTGTCAA+TGG | 0.480880 | 4.1:+87581887 | MS.gene054555:CDS |
| CTCACATCAAGATAACTAGA+AGG | 0.483153 | 4.1:-87583863 | None:intergenic |
| TTTGCAGTACAGTCAATTGA+AGG | 0.483786 | 4.1:-87586426 | None:intergenic |
| AACTTTGGGTTAATTGTCTG+AGG | 0.488966 | 4.1:-87585030 | None:intergenic |
| ACCAAACCAAGCACTTTCCC+CGG | 0.489846 | 4.1:-87582485 | None:intergenic |
| ATCATACCGGTTATGACGAC+AGG | 0.490261 | 4.1:-87581959 | None:intergenic |
| TGAAAGCTGCCCAAGTTGTC+CGG | 0.491384 | 4.1:+87583894 | MS.gene054555:CDS |
| TGCTGTTTGTATGGAACACC+TGG | 0.492329 | 4.1:+87584111 | MS.gene054555:CDS |
| GTGTCTTTGTCCAAATTCTC+CGG | 0.498181 | 4.1:-87582303 | None:intergenic |
| TATAGGAAGATTGTGTATTG+AGG | 0.500669 | 4.1:+87582072 | MS.gene054555:intron |
| TTGTTATGCTTGGTGAGAAT+GGG | 0.504018 | 4.1:+87584818 | MS.gene054555:CDS |
| AAGTTCAGGCTTCGTGTAGT+TGG | 0.505597 | 4.1:+87584769 | MS.gene054555:CDS |
| GGTTGCCGGTTCCGAGGCCG+GGG | 0.505721 | 4.1:+87582468 | MS.gene054555:intron |
| AAACAATGAGAGAGATATGA+AGG | 0.508578 | 4.1:+87583706 | MS.gene054555:CDS |
| CACATTCATAAAACGGGGCA+AGG | 0.508774 | 4.1:+87583659 | MS.gene054555:CDS |
| TAACACATACTGATAAGAAA+AGG | 0.514344 | 4.1:-87586479 | None:intergenic |
| GACAACATTCATCCGTATGC+TGG | 0.519437 | 4.1:+87584849 | MS.gene054555:CDS |
| TTCAGGCTTCGTGTAGTTGG+AGG | 0.519982 | 4.1:+87584772 | MS.gene054555:CDS |
| TAAAACGGGGCAAGGGAACG+TGG | 0.521293 | 4.1:+87583667 | MS.gene054555:CDS |
| TCAGATCCACCTATAGTGTC+AGG | 0.525068 | 4.1:-87584973 | None:intergenic |
| AGCCAAAATTCTAAGGGCAG+TGG | 0.528739 | 4.1:-87582531 | None:intergenic |
| ATAGAGAGCAAAAGCTTGCT+GGG | 0.529331 | 4.1:+87586700 | MS.gene054555:CDS |
| TCTATCAGATAAATGTCTGC+AGG | 0.531946 | 4.1:-87586246 | None:intergenic |
| CTTTCCAAGACAAAGACATA+AGG | 0.539595 | 4.1:-87585205 | None:intergenic |
| TTAGCAATGACCGGACAACT+TGG | 0.539932 | 4.1:-87583904 | None:intergenic |
| TCATTGAAACCTGACACTAT+AGG | 0.540340 | 4.1:+87584964 | MS.gene054555:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 4.1:+87583758 | MS.gene054555:CDS |
| GACAGAGTTATTGTTTATGA+GGG | 0.542830 | 4.1:+87586399 | MS.gene054555:CDS |
| CATCACATCTGATATAAACT+GGG | 0.543431 | 4.1:-87585109 | None:intergenic |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 4.1:+87584153 | MS.gene054555:CDS |
| CCAAGCACTTTCCCCGGCCT+CGG | 0.544800 | 4.1:-87582479 | None:intergenic |
| ACATCCAGTGCACAATTCCT+CGG | 0.548548 | 4.1:-87582125 | None:intergenic |
| ATCCCAGTCAGCAGTGATTG+TGG | 0.548844 | 4.1:-87586453 | None:intergenic |
| ACTACTTATCGAACAGCTGA+TGG | 0.549716 | 4.1:+87585137 | MS.gene054555:CDS |
| AAACCTGAACTTAGTCATCA+AGG | 0.550955 | 4.1:-87586734 | None:intergenic |
| AAAACGGGGCAAGGGAACGT+GGG | 0.554809 | 4.1:+87583668 | MS.gene054555:CDS |
| TTGCTGCAAAAGTTATCAAG+AGG | 0.559789 | 4.1:+87586307 | MS.gene054555:CDS |
| CTATCCGAGGAATTGTGCAC+TGG | 0.564876 | 4.1:+87582121 | MS.gene054555:CDS |
| TGAGCTTCAGCAGTTTCATG+TGG | 0.568344 | 4.1:-87584700 | None:intergenic |
| CTTTCCAGCCAAAATTCTAA+GGG | 0.572535 | 4.1:-87582537 | None:intergenic |
| ATCCAACTAATTTCCGCCCA+AGG | 0.577928 | 4.1:+87586652 | MS.gene054555:CDS |
| CACTATAGGTGGATCTGATG+TGG | 0.580575 | 4.1:+87584978 | MS.gene054555:CDS |
| AAGTTGTCCGGTCATTGCTA+AGG | 0.581006 | 4.1:+87583906 | MS.gene054555:CDS |
| TATTATGCCTTAGCAATGAC+CGG | 0.582030 | 4.1:-87583913 | None:intergenic |
| CAGTGCACAATTCCTCGGAT+AGG | 0.583504 | 4.1:-87582120 | None:intergenic |
| TTGTGTGAAATATTGAACTC+AGG | 0.583680 | 4.1:-87585006 | None:intergenic |
| AAAATTTCCTGCCAGTCAGG+AGG | 0.583757 | 4.1:-87582686 | None:intergenic |
| TCGGAATCAAGATGTGCACT+TGG | 0.586777 | 4.1:-87586273 | None:intergenic |
| TAGCAATGACCGGACAACTT+GGG | 0.588276 | 4.1:-87583903 | None:intergenic |
| ACTAAAAGAATACCAGCATA+CGG | 0.589186 | 4.1:-87584861 | None:intergenic |
| ATCAGCTGTTCGATAAGTAG+TGG | 0.593241 | 4.1:-87585135 | None:intergenic |
| GAGGAATTGTGCACTGGATG+TGG | 0.596595 | 4.1:+87582127 | MS.gene054555:CDS |
| TAGGAGGGCAGCAACAGCAA+TGG | 0.601333 | 4.1:-87583813 | None:intergenic |
| AAATTTCCTGCCAGTCAGGA+GGG | 0.605918 | 4.1:-87582685 | None:intergenic |
| ATTATAGGTTGCCGGTTCCG+AGG | 0.606131 | 4.1:+87582462 | MS.gene054555:intron |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 4.1:-87586665 | None:intergenic |
| ATGCTTGGTGAGAATGGGAC+GGG | 0.610087 | 4.1:+87584823 | MS.gene054555:CDS |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 4.1:+87583772 | MS.gene054555:CDS |
| GGTTGAGCATGATTTCATCA+TGG | 0.619459 | 4.1:+87586362 | MS.gene054555:CDS |
| AAACGGGGCAAGGGAACGTG+GGG | 0.627128 | 4.1:+87583669 | MS.gene054555:CDS |
| GCATCTGTCTCCATTGACAA+TGG | 0.633618 | 4.1:-87581897 | None:intergenic |
| ACATTCATAAAACGGGGCAA+GGG | 0.634571 | 4.1:+87583660 | MS.gene054555:CDS |
| TTGAAACCTGACACTATAGG+TGG | 0.643934 | 4.1:+87584967 | MS.gene054555:CDS |
| GAAATCATGCTCAACCACAA+AGG | 0.644019 | 4.1:-87586355 | None:intergenic |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 4.1:+87583773 | MS.gene054555:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.658017 | 4.1:+87584745 | MS.gene054555:CDS |
| GAAGATTGCTTACCTATCCG+AGG | 0.658534 | 4.1:+87582108 | MS.gene054555:CDS |
| GTTACGACTCCATATGCACC+AGG | 0.659399 | 4.1:-87584129 | None:intergenic |
| ATTAGGACCATATCTATGAG+TGG | 0.668366 | 4.1:-87582325 | None:intergenic |
| CAACAAACTTGGTTCAACCA+AGG | 0.671800 | 4.1:+87586677 | MS.gene054555:CDS |
| GTTATCTTGATGTGAGACAG+AGG | 0.675184 | 4.1:+87583870 | MS.gene054555:CDS |
| TATGCTTGGTGAGAATGGGA+CGG | 0.683302 | 4.1:+87584822 | MS.gene054555:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.688133 | 4.1:-87585108 | None:intergenic |
| TCATACCGGTTATGACGACA+GGG | 0.697152 | 4.1:-87581958 | None:intergenic |
| TTGATCACATTCATAAAACG+GGG | 0.709656 | 4.1:+87583654 | MS.gene054555:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACATAATAATTGATAAA+TGG | - | chr4.1:87582933-87582952 | None:intergenic | 10.0% |
| !! | ATTTATCAATTATTATGTAA+TGG | + | chr4.1:87582932-87582951 | MS.gene054555:intron | 10.0% |
| !! | GAATTCAATTAATATTTATA+TGG | - | chr4.1:87586033-87586052 | None:intergenic | 10.0% |
| !! | TATTCTTATAAATTAGATAT+TGG | + | chr4.1:87584576-87584595 | MS.gene054555:intron | 10.0% |
| !! | TTTGTAAAAAAAAAAATTAC+TGG | - | chr4.1:87582883-87582902 | None:intergenic | 10.0% |
| !!! | AAAATGTTTTTCAAAATTAA+AGG | - | chr4.1:87583438-87583457 | None:intergenic | 10.0% |
| !! | TACAAAACGATATTAAATAA+AGG | - | chr4.1:87582789-87582808 | None:intergenic | 15.0% |
| !! | TCAAATGAAAATATTGATAA+TGG | + | chr4.1:87585841-87585860 | MS.gene054555:intron | 15.0% |
| !! | TTCAATATATGTTATAATAC+AGG | + | chr4.1:87583610-87583629 | MS.gene054555:intron | 15.0% |
| !!! | AAAAAAAAAAAGGCTAATTT+TGG | - | chr4.1:87582597-87582616 | None:intergenic | 15.0% |
| !!! | AAAAGTTCTAACAAAATATA+AGG | - | chr4.1:87584517-87584536 | None:intergenic | 15.0% |
| !!! | ATAAGAATATTTTCATTTTG+AGG | - | chr4.1:87584565-87584584 | None:intergenic | 15.0% |
| !!! | CAAATGAAAATATTGATAAT+GGG | + | chr4.1:87585842-87585861 | MS.gene054555:intron | 15.0% |
| !!! | GTTTTTCTGATTTTTTTTAT+TGG | + | chr4.1:87582906-87582925 | MS.gene054555:intron | 15.0% |
| !!! | TATGTGTTATTATTTTTCAA+TGG | + | chr4.1:87586493-87586512 | MS.gene054555:intron | 15.0% |
| !!! | TCATATTTTAACAAAAAGAT+AGG | - | chr4.1:87585595-87585614 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAATATGAT+TGG | + | chr4.1:87585596-87585615 | MS.gene054555:intron | 15.0% |
| !!! | TGAAATTTTATGTTAATGTT+TGG | + | chr4.1:87582006-87582025 | MS.gene054555:intron | 15.0% |
| !!! | TGATTTTTTATGATTTGTTA+TGG | + | chr4.1:87585432-87585451 | MS.gene054555:intron | 15.0% |
| !!! | TTTTTATTCAAATAAACTCA+TGG | + | chr4.1:87584435-87584454 | MS.gene054555:intron | 15.0% |
| !! | AGAATTTCTTTAATTGAGAA+GGG | + | chr4.1:87582982-87583001 | MS.gene054555:intron | 20.0% |
| !! | ATAATCTTAATTGCTTCAAA+AGG | - | chr4.1:87582276-87582295 | None:intergenic | 20.0% |
| !! | ATAGATTATTTATACCTTGA+AGG | - | chr4.1:87584244-87584263 | None:intergenic | 20.0% |
| !! | CACGGTATAAAAAAAAAAAA+AGG | - | chr4.1:87582607-87582626 | None:intergenic | 20.0% |
| !! | TAGAATTTCTTTAATTGAGA+AGG | + | chr4.1:87582981-87583000 | MS.gene054555:intron | 20.0% |
| !! | TATTGATCACATTCATAAAA+CGG | + | chr4.1:87583652-87583671 | MS.gene054555:CDS | 20.0% |
| !! | TTTGTTAAAATATGATTGGA+TGG | + | chr4.1:87585600-87585619 | MS.gene054555:intron | 20.0% |
| !!! | AGGAAATTTTGACTTATTAT+CGG | + | chr4.1:87582699-87582718 | MS.gene054555:CDS | 20.0% |
| !!! | ATGTTTATTTCTACATTACA+AGG | - | chr4.1:87583323-87583342 | None:intergenic | 20.0% |
| !!! | ATTCAGAAACCAAATATTTT+CGG | - | chr4.1:87584412-87584431 | None:intergenic | 20.0% |
| !!! | CATATTAACACAGAATTTTT+AGG | - | chr4.1:87582390-87582409 | None:intergenic | 20.0% |
| !!! | CTATTTCGTTTGAAATAAAT+AGG | - | chr4.1:87586182-87586201 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTTTATACCG+TGG | + | chr4.1:87582605-87582624 | MS.gene054555:intron | 20.0% |
| !!! | TATCTTATTGATTTAGACTT+TGG | + | chr4.1:87582821-87582840 | MS.gene054555:intron | 20.0% |
| !!! | TTGTTAGAACTTTTAGATAT+TGG | + | chr4.1:87584523-87584542 | MS.gene054555:intron | 20.0% |
| ! | AAATTCAGATTTATCTTGAC+TGG | - | chr4.1:87584012-87584031 | None:intergenic | 25.0% |
| ! | AAGAAATTCTACAACACTAT+AGG | - | chr4.1:87582972-87582991 | None:intergenic | 25.0% |
| ! | AATTAAGATTATCAACTTGC+CGG | + | chr4.1:87582284-87582303 | MS.gene054555:CDS | 25.0% |
| ! | AGCTATTCAAGAATGTAAAA+AGG | - | chr4.1:87585310-87585329 | None:intergenic | 25.0% |
| ! | ATGATTATGCGTGTAATTAT+AGG | + | chr4.1:87582055-87582074 | MS.gene054555:intron | 25.0% |
| ! | ATGGAATATAAAGCCAATTT+GGG | + | chr4.1:87584280-87584299 | MS.gene054555:intron | 25.0% |
| ! | ATTGAATTCCTTATCCATTA+CGG | + | chr4.1:87586044-87586063 | MS.gene054555:intron | 25.0% |
| ! | ATTGATCACATTCATAAAAC+GGG | + | chr4.1:87583653-87583672 | MS.gene054555:CDS | 25.0% |
| ! | CAATTATTATGTAATGGTAG+AGG | + | chr4.1:87582938-87582957 | MS.gene054555:intron | 25.0% |
| ! | TAAAAAGGAAAGAAAAAGCA+GGG | - | chr4.1:87585295-87585314 | None:intergenic | 25.0% |
| ! | TAACACATACTGATAAGAAA+AGG | - | chr4.1:87586482-87586501 | None:intergenic | 25.0% |
| ! | TATCTATCTATCTATCTATG+CGG | - | chr4.1:87583204-87583223 | None:intergenic | 25.0% |
| ! | TATGGAATATAAAGCCAATT+TGG | + | chr4.1:87584279-87584298 | MS.gene054555:intron | 25.0% |
| ! | TGCACATTCAGAAAAATATA+AGG | - | chr4.1:87583492-87583511 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | + | chr4.1:87585530-87585549 | MS.gene054555:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | + | chr4.1:87585531-87585550 | MS.gene054555:intron | 25.0% |
| !! | AAAAAGATAGGCCATATTTT+TGG | - | chr4.1:87585583-87585602 | None:intergenic | 25.0% |
| !! | AAAAGATAGGCCATATTTTT+GGG | - | chr4.1:87585582-87585601 | None:intergenic | 25.0% |
| !! | ACTTTTCTCAATTCTATTGT+TGG | - | chr4.1:87584385-87584404 | None:intergenic | 25.0% |
| !! | TAGATAGATAATCTTTGAAG+AGG | + | chr4.1:87583218-87583237 | MS.gene054555:intron | 25.0% |
| !!! | AAAGAAGTTTTGAATCTTTC+TGG | + | chr4.1:87585162-87585181 | MS.gene054555:CDS | 25.0% |
| !!! | ATTTTTAGAACTATACCTCT+TGG | + | chr4.1:87586117-87586136 | MS.gene054555:intron | 25.0% |
| !!! | GAAATTTTGACTTATTATCG+GGG | + | chr4.1:87582701-87582720 | MS.gene054555:CDS | 25.0% |
| !!! | GGAAATTTTGACTTATTATC+GGG | + | chr4.1:87582700-87582719 | MS.gene054555:CDS | 25.0% |
| !!! | TAACAGTTGATTTGAACTTT+GGG | - | chr4.1:87585047-87585066 | None:intergenic | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | + | chr4.1:87585545-87585564 | MS.gene054555:intron | 25.0% |
| !!! | TGGCTTTATATTCCATAAAT+GGG | - | chr4.1:87584276-87584295 | None:intergenic | 25.0% |
| !!! | TTGGCTTTATATTCCATAAA+TGG | - | chr4.1:87584277-87584296 | None:intergenic | 25.0% |
| AAAAGCGATACACTAATTCA+TGG | + | chr4.1:87583091-87583110 | MS.gene054555:intron | 30.0% | |
| AAACAATGAGAGAGATATGA+AGG | + | chr4.1:87583706-87583725 | MS.gene054555:CDS | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | + | chr4.1:87584206-87584225 | MS.gene054555:CDS | 30.0% | |
| AACAGTATCAAAGTTGAACT+CGG | - | chr4.1:87583256-87583275 | None:intergenic | 30.0% | |
| AATGAACCAACCTGAATAAA+AGG | - | chr4.1:87584949-87584968 | None:intergenic | 30.0% | |
| ACTAAAAGAATACCAGCATA+CGG | - | chr4.1:87584864-87584883 | None:intergenic | 30.0% | |
| AGTACTGCAGTAATACAAAT+TGG | + | chr4.1:87583293-87583312 | MS.gene054555:intron | 30.0% | |
| ATATAAGGACAACAAATGCT+AGG | - | chr4.1:87583477-87583496 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | - | chr4.1:87585111-87585130 | None:intergenic | 30.0% | |
| ATGTTGACGTTTCATTAACT+GGG | + | chr4.1:87583027-87583046 | MS.gene054555:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | + | chr4.1:87584205-87584224 | MS.gene054555:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | + | chr4.1:87583758-87583777 | MS.gene054555:CDS | 30.0% | |
| CATCACATCTGATATAAACT+GGG | - | chr4.1:87585112-87585131 | None:intergenic | 30.0% | |
| CCGGTTAAAATTGTCTATAT+CGG | + | chr4.1:87585466-87585485 | MS.gene054555:intron | 30.0% | |
| CTTTATATTCCATAAATGGG+AGG | - | chr4.1:87584273-87584292 | None:intergenic | 30.0% | |
| GACAGAGTTATTGTTTATGA+GGG | + | chr4.1:87586399-87586418 | MS.gene054555:CDS | 30.0% | |
| GATGAATTCTTTCATGTAAC+AGG | - | chr4.1:87585074-87585093 | None:intergenic | 30.0% | |
| GGAATTAATATCTTCTTGTC+TGG | + | chr4.1:87584174-87584193 | MS.gene054555:CDS | 30.0% | |
| GTAAAAAGGAAAGAAAAAGC+AGG | - | chr4.1:87585296-87585315 | None:intergenic | 30.0% | |
| TAAGCACATTAGAAACCAAA+AGG | - | chr4.1:87583589-87583608 | None:intergenic | 30.0% | |
| TATAAATGATGCATCGCAAA+AGG | - | chr4.1:87584470-87584489 | None:intergenic | 30.0% | |
| TATAGGAAGATTGTGTATTG+AGG | + | chr4.1:87582072-87582091 | MS.gene054555:intron | 30.0% | |
| TCAAGAGAGTTGTGTATTAT+AGG | + | chr4.1:87582447-87582466 | MS.gene054555:intron | 30.0% | |
| TCAATCAATCTCAGTATTGT+AGG | - | chr4.1:87584342-87584361 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | - | chr4.1:87585113-87585132 | None:intergenic | 30.0% | |
| TGACAGAGTTATTGTTTATG+AGG | + | chr4.1:87586398-87586417 | MS.gene054555:CDS | 30.0% | |
| TTCAACAACAATTACATAGC+TGG | - | chr4.1:87584052-87584071 | None:intergenic | 30.0% | |
| TTGATCACATTCATAAAACG+GGG | + | chr4.1:87583654-87583673 | MS.gene054555:CDS | 30.0% | |
| TTGTGTGAAATATTGAACTC+AGG | - | chr4.1:87585009-87585028 | None:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | + | chr4.1:87584199-87584218 | MS.gene054555:CDS | 30.0% | |
| TTTATCTTGACTGGAAATCA+AGG | - | chr4.1:87584003-87584022 | None:intergenic | 30.0% | |
| ! | AAAATTATGTTTTGCTCTCG+TGG | + | chr4.1:87586563-87586582 | MS.gene054555:intron | 30.0% |
| ! | AAAGTAGTGCCGAAAATATT+TGG | + | chr4.1:87584400-87584419 | MS.gene054555:intron | 30.0% |
| ! | ACATGTATATCTCAGCTTTT+AGG | - | chr4.1:87583835-87583854 | None:intergenic | 30.0% |
| ! | ACTGCAGTACTTTTATGATA+TGG | - | chr4.1:87583284-87583303 | None:intergenic | 30.0% |
| ! | ATAGATAATCTTTGAAGAGG+TGG | + | chr4.1:87583221-87583240 | MS.gene054555:intron | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | + | chr4.1:87582343-87582362 | MS.gene054555:CDS | 30.0% |
| ! | CTACTTCCATGTCAATTTTT+CGG | + | chr4.1:87585976-87585995 | MS.gene054555:intron | 30.0% |
| ! | TAGATAATCTTTGAAGAGGT+GGG | + | chr4.1:87583222-87583241 | MS.gene054555:intron | 30.0% |
| ! | TCATATCTCTCTCATTGTTT+TGG | - | chr4.1:87583706-87583725 | None:intergenic | 30.0% |
| ! | TTAAGAAAGGTTCTTCCTTT+TGG | + | chr4.1:87583571-87583590 | MS.gene054555:intron | 30.0% |
| !! | ATTTGTGTTAAGGTATTGAG+AGG | + | chr4.1:87582151-87582170 | MS.gene054555:intron | 30.0% |
| !! | CCGATATAGACAATTTTAAC+CGG | - | chr4.1:87585469-87585488 | None:intergenic | 30.0% |
| !! | CTAACAGTTGATTTGAACTT+TGG | - | chr4.1:87585048-87585067 | None:intergenic | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | - | chr4.1:87582345-87582364 | None:intergenic | 30.0% |
| !! | CTTATTGATTTAGACTTTGG+TGG | + | chr4.1:87582824-87582843 | MS.gene054555:intron | 30.0% |
| !! | GACTTTATTTGCTGTTTGTA+TGG | + | chr4.1:87584102-87584121 | MS.gene054555:CDS | 30.0% |
| !! | TATAATACAGGTTAGCTTCA+AGG | + | chr4.1:87583622-87583641 | MS.gene054555:intron | 30.0% |
| !! | TGAAAATATTGATAATGGGC+CGG | + | chr4.1:87585846-87585865 | MS.gene054555:intron | 30.0% |
| !!! | CTTTTTTATATGGGCCAAAT+GGG | + | chr4.1:87585496-87585515 | MS.gene054555:intron | 30.0% |
| !!! | TTTTTTTTTATACCGTGGAG+TGG | + | chr4.1:87582610-87582629 | MS.gene054555:intron | 30.0% |
| AAACTAGCCCAAAATACACT+CGG | - | chr4.1:87585541-87585560 | None:intergenic | 35.0% | |
| AAAGACACCACTCATAGATA+TGG | + | chr4.1:87582318-87582337 | MS.gene054555:CDS | 35.0% | |
| AACAAAACACCGAATCATAC+CGG | - | chr4.1:87581975-87581994 | None:intergenic | 35.0% | |
| ACTTTCCAGCCAAAATTCTA+AGG | - | chr4.1:87582541-87582560 | None:intergenic | 35.0% | |
| AGTTGTGTATTATAGGTTGC+CGG | + | chr4.1:87582454-87582473 | MS.gene054555:intron | 35.0% | |
| ATATTCCATAAATGGGAGGT+AGG | - | chr4.1:87584269-87584288 | None:intergenic | 35.0% | |
| ATGTTGACATTGACATTAGC+TGG | + | chr4.1:87583120-87583139 | MS.gene054555:intron | 35.0% | |
| ATTAGGACCATATCTATGAG+TGG | - | chr4.1:87582328-87582347 | None:intergenic | 35.0% | |
| CAATACTGAGATTGATTGAG+TGG | + | chr4.1:87584343-87584362 | MS.gene054555:intron | 35.0% | |
| CATGTTGACGTTTCATTAAC+TGG | + | chr4.1:87583026-87583045 | MS.gene054555:intron | 35.0% | |
| CCATTTGGCCCATATAAAAA+AGG | - | chr4.1:87585498-87585517 | None:intergenic | 35.0% | |
| CTAGACACAACATTAAAGCA+GGG | - | chr4.1:87584668-87584687 | None:intergenic | 35.0% | |
| CTCACATCAAGATAACTAGA+AGG | - | chr4.1:87583866-87583885 | None:intergenic | 35.0% | |
| CTTATGTCTTTGTCTTGGAA+AGG | + | chr4.1:87585206-87585225 | MS.gene054555:CDS | 35.0% | |
| CTTTCCAAGACAAAGACATA+AGG | - | chr4.1:87585208-87585227 | None:intergenic | 35.0% | |
| CTTTCCAGCCAAAATTCTAA+GGG | - | chr4.1:87582540-87582559 | None:intergenic | 35.0% | |
| GAAGTAGAGCTGTCAAAAAT+GGG | - | chr4.1:87585963-87585982 | None:intergenic | 35.0% | |
| GATAGTGTGACACTTAAGAA+AGG | + | chr4.1:87583558-87583577 | MS.gene054555:intron | 35.0% | |
| GTGTTTCCGAAAAATTGACA+TGG | - | chr4.1:87585985-87586004 | None:intergenic | 35.0% | |
| GTTTCCTTATGTCTTTGTCT+TGG | + | chr4.1:87585201-87585220 | MS.gene054555:CDS | 35.0% | |
| TAAAATTGTCTATATCGGCC+CGG | + | chr4.1:87585471-87585490 | MS.gene054555:intron | 35.0% | |
| TAGAGTGATGACAAGATCAA+GGG | + | chr4.1:87585389-87585408 | MS.gene054555:intron | 35.0% | |
| TATTATGCCTTAGCAATGAC+CGG | - | chr4.1:87583916-87583935 | None:intergenic | 35.0% | |
| TCATTGAAACCTGACACTAT+AGG | + | chr4.1:87584964-87584983 | MS.gene054555:CDS | 35.0% | |
| TCTATCAGATAAATGTCTGC+AGG | - | chr4.1:87586249-87586268 | None:intergenic | 35.0% | |
| TGGATGTGGTATTTGTGTTA+AGG | + | chr4.1:87582141-87582160 | MS.gene054555:CDS | 35.0% | |
| TGGTTGGGAAAAATGGAATT+GGG | + | chr4.1:87582504-87582523 | MS.gene054555:CDS | 35.0% | |
| TGTAGTTGGAGGAGAATTTA+CGG | + | chr4.1:87584783-87584802 | MS.gene054555:CDS | 35.0% | |
| TGTTGACATTGACATTAGCT+GGG | + | chr4.1:87583121-87583140 | MS.gene054555:intron | 35.0% | |
| TTAGAGTGATGACAAGATCA+AGG | + | chr4.1:87585388-87585407 | MS.gene054555:intron | 35.0% | |
| TTCATAGTTTCCTTTATGCC+AGG | + | chr4.1:87585329-87585348 | MS.gene054555:intron | 35.0% | |
| TTGCTGCAAAAGTTATCAAG+AGG | + | chr4.1:87586307-87586326 | MS.gene054555:CDS | 35.0% | |
| TTGGTTGGGAAAAATGGAAT+TGG | + | chr4.1:87582503-87582522 | MS.gene054555:CDS | 35.0% | |
| TTTAGGTAACCACAGCTAAA+AGG | - | chr4.1:87582373-87582392 | None:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | - | chr4.1:87586429-87586448 | None:intergenic | 35.0% | |
| ! | AACTTTGGGTTAATTGTCTG+AGG | - | chr4.1:87585033-87585052 | None:intergenic | 35.0% |
| ! | AGATAATCTTTGAAGAGGTG+GGG | + | chr4.1:87583223-87583242 | MS.gene054555:intron | 35.0% |
| ! | ATCTATTTGTGTTGACGTCA+TGG | + | chr4.1:87586090-87586109 | MS.gene054555:intron | 35.0% |
| ! | ATGATTTTGCGACGATAATC+TGG | + | chr4.1:87582207-87582226 | MS.gene054555:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | - | chr4.1:87584207-87584226 | None:intergenic | 35.0% |
| ! | GCAATCTTATGCAGTTTTCA+AGG | - | chr4.1:87585247-87585266 | None:intergenic | 35.0% |
| ! | TCTCAGATTGTTGTTATGCT+TGG | + | chr4.1:87584808-87584827 | MS.gene054555:CDS | 35.0% |
| ! | TGATTTTGCGACGATAATCT+GGG | + | chr4.1:87582208-87582227 | MS.gene054555:intron | 35.0% |
| ! | TGTATATCTCAGCTTTTAGG+AGG | - | chr4.1:87583832-87583851 | None:intergenic | 35.0% |
| ! | TTGTTATGCTTGGTGAGAAT+GGG | + | chr4.1:87584818-87584837 | MS.gene054555:CDS | 35.0% |
| !! | AACCAAGTTTGTTGATCCTT+GGG | - | chr4.1:87586671-87586690 | None:intergenic | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | + | chr4.1:87583771-87583790 | MS.gene054555:CDS | 35.0% |
| !! | GTATATCTCAGCTTTTAGGA+GGG | - | chr4.1:87583831-87583850 | None:intergenic | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | + | chr4.1:87583772-87583791 | MS.gene054555:CDS | 35.0% |
| !!! | CCTTTTTTATATGGGCCAAA+TGG | + | chr4.1:87585495-87585514 | MS.gene054555:intron | 35.0% |
| !!! | GAAGTTTTGAATCTTTCTGG+TGG | + | chr4.1:87585165-87585184 | MS.gene054555:CDS | 35.0% |
| !!! | TAGAATTTTGGCTGGAAAGT+TGG | + | chr4.1:87582541-87582560 | MS.gene054555:CDS | 35.0% |
| ACAGTGAAACGACCCAAATT+TGG | - | chr4.1:87582569-87582588 | None:intergenic | 40.0% | |
| ACATTCATAAAACGGGGCAA+GGG | + | chr4.1:87583660-87583679 | MS.gene054555:CDS | 40.0% | |
| ACTACTTATCGAACAGCTGA+TGG | + | chr4.1:87585137-87585156 | MS.gene054555:CDS | 40.0% | |
| AGATGCAAGCCAAAAAAGTG+TGG | + | chr4.1:87581914-87581933 | MS.gene054555:CDS | 40.0% | |
| ATCAGCTGTTCGATAAGTAG+TGG | - | chr4.1:87585138-87585157 | None:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | - | chr4.1:87584159-87584178 | None:intergenic | 40.0% | |
| CAACAAACTTGGTTCAACCA+AGG | + | chr4.1:87586677-87586696 | MS.gene054555:CDS | 40.0% | |
| CAACACAAATAGATGTCTGC+AGG | - | chr4.1:87586084-87586103 | None:intergenic | 40.0% | |
| CCTAGACACAACATTAAAGC+AGG | - | chr4.1:87584669-87584688 | None:intergenic | 40.0% | |
| CCTGCTTTAATGTTGTGTCT+AGG | + | chr4.1:87584666-87584685 | MS.gene054555:intron | 40.0% | |
| CTTTCGAGATGAGAGTTTGA+AGG | + | chr4.1:87582751-87582770 | MS.gene054555:CDS | 40.0% | |
| GAAATCATGCTCAACCACAA+AGG | - | chr4.1:87586358-87586377 | None:intergenic | 40.0% | |
| GAACCAACCTGAATAAAAGG+AGG | - | chr4.1:87584946-87584965 | None:intergenic | 40.0% | |
| GATTGGGATTTGTGAGTGTT+TGG | + | chr4.1:87583159-87583178 | MS.gene054555:intron | 40.0% | |
| GGAAAGTTGGAGCCAAATTT+GGG | + | chr4.1:87582554-87582573 | MS.gene054555:CDS | 40.0% | |
| GGAAGTAGAGCTGTCAAAAA+TGG | - | chr4.1:87585964-87585983 | None:intergenic | 40.0% | |
| GGTATGTTGTGGTTGTGATT+GGG | + | chr4.1:87583143-87583162 | MS.gene054555:intron | 40.0% | |
| GGTCATTGCTAAGGCATAAT+AGG | + | chr4.1:87583915-87583934 | MS.gene054555:CDS | 40.0% | |
| GGTTGAGCATGATTTCATCA+TGG | + | chr4.1:87586362-87586381 | MS.gene054555:CDS | 40.0% | |
| GTGTCTTTGTCCAAATTCTC+CGG | - | chr4.1:87582306-87582325 | None:intergenic | 40.0% | |
| GTTATCTTGATGTGAGACAG+AGG | + | chr4.1:87583870-87583889 | MS.gene054555:CDS | 40.0% | |
| GTTGACATTGACATTAGCTG+GGG | + | chr4.1:87583122-87583141 | MS.gene054555:intron | 40.0% | |
| TAAAAGACCAAACTTCGACC+TGG | - | chr4.1:87585350-87585369 | None:intergenic | 40.0% | |
| TATCAACTTGCCGGAGAATT+TGG | + | chr4.1:87582293-87582312 | MS.gene054555:CDS | 40.0% | |
| TATCTCCTACCTCCCATTTA+TGG | + | chr4.1:87584261-87584280 | MS.gene054555:intron | 40.0% | |
| TCGTCATAACCGGTATGATT+CGG | + | chr4.1:87581963-87581982 | MS.gene054555:intron | 40.0% | |
| TGAACACGATCTTAGTGTCT+TGG | + | chr4.1:87584068-87584087 | MS.gene054555:CDS | 40.0% | |
| TGCAAAGAAAACAGCCTTTG+TGG | + | chr4.1:87586341-87586360 | MS.gene054555:CDS | 40.0% | |
| TGCAGCAATAATACGCTGTT+CGG | - | chr4.1:87586295-87586314 | None:intergenic | 40.0% | |
| TGGAAAGTTGGAGCCAAATT+TGG | + | chr4.1:87582553-87582572 | MS.gene054555:CDS | 40.0% | |
| TGGCCCATATAAAAAAGGAC+CGG | - | chr4.1:87585493-87585512 | None:intergenic | 40.0% | |
| TGTTATGGATGTGCATCAAC+CGG | + | chr4.1:87585447-87585466 | MS.gene054555:intron | 40.0% | |
| TTGAAACCTGACACTATAGG+TGG | + | chr4.1:87584967-87584986 | MS.gene054555:CDS | 40.0% | |
| ! | AAGCTTTTGCTCTCTATCCT+TGG | - | chr4.1:87586697-87586716 | None:intergenic | 40.0% |
| ! | ATAGAGAGCAAAAGCTTGCT+GGG | + | chr4.1:87586700-87586719 | MS.gene054555:CDS | 40.0% |
| ! | GTTGTTATGCTTGGTGAGAA+TGG | + | chr4.1:87584817-87584836 | MS.gene054555:CDS | 40.0% |
| ! | TTCACCACCTCCTTTTATTC+AGG | + | chr4.1:87584936-87584955 | MS.gene054555:intron | 40.0% |
| ! | TTTTTGCCCAAAAGCCCATT+TGG | - | chr4.1:87585513-87585532 | None:intergenic | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | + | chr4.1:87583773-87583792 | MS.gene054555:CDS | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | + | chr4.1:87583770-87583789 | MS.gene054555:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | - | chr4.1:87584747-87584766 | None:intergenic | 40.0% |
| !! | CTTGGTTTGGTTGGGAAAAA+TGG | + | chr4.1:87582497-87582516 | MS.gene054555:CDS | 40.0% |
| !! | GAACCAAGTTTGTTGATCCT+TGG | - | chr4.1:87586672-87586691 | None:intergenic | 40.0% |
| !! | TCGTAGAACCGTAATGGATA+AGG | - | chr4.1:87586055-87586074 | None:intergenic | 40.0% |
| !!! | ATAGGCCATATTTTTGGGCT+GGG | - | chr4.1:87585577-87585596 | None:intergenic | 40.0% |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | - | chr4.1:87585893-87585912 | None:intergenic | 40.0% |
| AAAATTTCCTGCCAGTCAGG+AGG | - | chr4.1:87582689-87582708 | None:intergenic | 45.0% | |
| AAACATGTCTGTCCACTCCA+CGG | - | chr4.1:87582625-87582644 | None:intergenic | 45.0% | |
| AAAGACACAACGAAGCCAAG+AGG | - | chr4.1:87586135-87586154 | None:intergenic | 45.0% | |
| AAATTTCCTGCCAGTCAGGA+GGG | - | chr4.1:87582688-87582707 | None:intergenic | 45.0% | |
| AAGTTCAGGCTTCGTGTAGT+TGG | + | chr4.1:87584769-87584788 | MS.gene054555:CDS | 45.0% | |
| AAGTTGTCCGGTCATTGCTA+AGG | + | chr4.1:87583906-87583925 | MS.gene054555:CDS | 45.0% | |
| ACATCCAGTGCACAATTCCT+CGG | - | chr4.1:87582128-87582147 | None:intergenic | 45.0% | |
| ACATTAGCTGGGGTATGTTG+TGG | + | chr4.1:87583132-87583151 | MS.gene054555:intron | 45.0% | |
| ACGCGTATTGCCATTGTCAA+TGG | + | chr4.1:87581887-87581906 | MS.gene054555:CDS | 45.0% | |
| ATCAATCTCAGCGCCCAAAT+TGG | - | chr4.1:87584296-87584315 | None:intergenic | 45.0% | |
| ATCCAACTAATTTCCGCCCA+AGG | + | chr4.1:87586652-87586671 | MS.gene054555:CDS | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | - | chr4.1:87586657-87586676 | None:intergenic | 45.0% | |
| CAAACTTCGACCTGGCATAA+AGG | - | chr4.1:87585342-87585361 | None:intergenic | 45.0% | |
| CAACAGCAATGGCAAACCTT+TGG | - | chr4.1:87583805-87583824 | None:intergenic | 45.0% | |
| CACATTCATAAAACGGGGCA+AGG | + | chr4.1:87583659-87583678 | MS.gene054555:CDS | 45.0% | |
| CACTATAGGTGGATCTGATG+TGG | + | chr4.1:87584978-87584997 | MS.gene054555:CDS | 45.0% | |
| CAGGGCAGACACTAGAATTA+AGG | - | chr4.1:87585277-87585296 | None:intergenic | 45.0% | |
| CCAAAACTCAAGGCAAGTTC+AGG | + | chr4.1:87584755-87584774 | MS.gene054555:CDS | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | + | chr4.1:87584745-87584764 | MS.gene054555:CDS | 45.0% | |
| CCAACCTGAATAAAAGGAGG+TGG | - | chr4.1:87584943-87584962 | None:intergenic | 45.0% | |
| CTACTGTCGTAGAACCGTAA+TGG | - | chr4.1:87586061-87586080 | None:intergenic | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | + | chr4.1:87584153-87584172 | MS.gene054555:CDS | 45.0% | |
| CTTTATGCCAGGTCGAAGTT+TGG | + | chr4.1:87585340-87585359 | MS.gene054555:intron | 45.0% | |
| GAAGATTGCTTACCTATCCG+AGG | + | chr4.1:87582108-87582127 | MS.gene054555:CDS | 45.0% | |
| GACAACATTCATCCGTATGC+TGG | + | chr4.1:87584849-87584868 | MS.gene054555:CDS | 45.0% | |
| GATAGAGAGCAAAAGCTTGC+TGG | + | chr4.1:87586699-87586718 | MS.gene054555:CDS | 45.0% | |
| GCATCTGTCTCCATTGACAA+TGG | - | chr4.1:87581900-87581919 | None:intergenic | 45.0% | |
| GGATGACTCTCTTACCTTCA+AGG | + | chr4.1:87584227-87584246 | MS.gene054555:CDS | 45.0% | |
| GGCCCATATAAAAAAGGACC+GGG | - | chr4.1:87585492-87585511 | None:intergenic | 45.0% | |
| GGGTATGTTGTGGTTGTGAT+TGG | + | chr4.1:87583142-87583161 | MS.gene054555:intron | 45.0% | |
| GTCAAAATTTCCTGCCAGTC+AGG | - | chr4.1:87582692-87582711 | None:intergenic | 45.0% | |
| GTTCTGCAAACCAAAAGCAG+AGG | - | chr4.1:87582666-87582685 | None:intergenic | 45.0% | |
| TAAATGTCTGCAGGCTGTTG+TGG | - | chr4.1:87586240-87586259 | None:intergenic | 45.0% | |
| TAGCAATGACCGGACAACTT+GGG | - | chr4.1:87583906-87583925 | None:intergenic | 45.0% | |
| TATGGAACACCTGGTGCATA+TGG | + | chr4.1:87584120-87584139 | MS.gene054555:CDS | 45.0% | |
| TCAGATCCACCTATAGTGTC+AGG | - | chr4.1:87584976-87584995 | None:intergenic | 45.0% | |
| TCGGAATCAAGATGTGCACT+TGG | - | chr4.1:87586276-87586295 | None:intergenic | 45.0% | |
| TGAGCTTCAGCAGTTTCATG+TGG | - | chr4.1:87584703-87584722 | None:intergenic | 45.0% | |
| TTAGCAATGACCGGACAACT+TGG | - | chr4.1:87583907-87583926 | None:intergenic | 45.0% | |
| ! | ACTGCATTCACCTCTGCTTT+TGG | + | chr4.1:87582653-87582672 | MS.gene054555:intron | 45.0% |
| ! | AGCCAAAATTCTAAGGGCAG+TGG | - | chr4.1:87582534-87582553 | None:intergenic | 45.0% |
| ! | ATCATACCGGTTATGACGAC+AGG | - | chr4.1:87581962-87581981 | None:intergenic | 45.0% |
| ! | CAAGCCAAAAAAGTGTGGAC+AGG | + | chr4.1:87581919-87581938 | MS.gene054555:CDS | 45.0% |
| ! | CCACCTCCTTTTATTCAGGT+TGG | + | chr4.1:87584940-87584959 | MS.gene054555:intron | 45.0% |
| ! | CCTGAACTTGCCTTGAGTTT+TGG | - | chr4.1:87584758-87584777 | None:intergenic | 45.0% |
| ! | GTCCACTGCCCTTAGAATTT+TGG | + | chr4.1:87582529-87582548 | MS.gene054555:CDS | 45.0% |
| ! | TATGCTTGGTGAGAATGGGA+CGG | + | chr4.1:87584822-87584841 | MS.gene054555:CDS | 45.0% |
| ! | TCATACCGGTTATGACGACA+GGG | - | chr4.1:87581961-87581980 | None:intergenic | 45.0% |
| ! | TGCTGTTTGTATGGAACACC+TGG | + | chr4.1:87584111-87584130 | MS.gene054555:CDS | 45.0% |
| !! | ACTGCCCTTAGAATTTTGGC+TGG | + | chr4.1:87582533-87582552 | MS.gene054555:CDS | 45.0% |
| !! | ATATGGGCCAAATGGGCTTT+TGG | + | chr4.1:87585503-87585522 | MS.gene054555:intron | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | - | chr4.1:87586668-87586687 | None:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | - | chr4.1:87584748-87584767 | None:intergenic | 45.0% |
| !! | CTTGCCTTGAGTTTTGGTCA+TGG | - | chr4.1:87584752-87584771 | None:intergenic | 45.0% |
| !! | GGAAAGTGCTTGGTTTGGTT+GGG | + | chr4.1:87582489-87582508 | MS.gene054555:CDS | 45.0% |
| !! | TATGGGCCAAATGGGCTTTT+GGG | + | chr4.1:87585504-87585523 | MS.gene054555:intron | 45.0% |
| !!! | CACTCCTGTCCACACTTTTT+TGG | - | chr4.1:87581926-87581945 | None:intergenic | 45.0% |
| !!! | GATAGGCCATATTTTTGGGC+TGG | - | chr4.1:87585578-87585597 | None:intergenic | 45.0% |
| !!! | GGCCCGGTCCTTTTTTATAT+GGG | + | chr4.1:87585487-87585506 | MS.gene054555:intron | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | + | chr4.1:87585551-87585570 | MS.gene054555:intron | 45.0% |
| !!! | TAATTTTTTTTTTTACAAAT+TGG | + | chr4.1:87582884-87582903 | MS.gene054555:intron | 5.0% |
| !!! | TTCAATTATTTTAAAAATAA+TGG | - | chr4.1:87586521-87586540 | None:intergenic | 5.0% |
| ACCAAACCAAGCACTTTCCC+CGG | - | chr4.1:87582488-87582507 | None:intergenic | 50.0% | |
| ATCCCAGTCAGCAGTGATTG+TGG | - | chr4.1:87586456-87586475 | None:intergenic | 50.0% | |
| CAGTGCACAATTCCTCGGAT+AGG | - | chr4.1:87582123-87582142 | None:intergenic | 50.0% | |
| CGCCCAAGGATCAACAAACT+TGG | + | chr4.1:87586666-87586685 | MS.gene054555:CDS | 50.0% | |
| CTATCCGAGGAATTGTGCAC+TGG | + | chr4.1:87582121-87582140 | MS.gene054555:CDS | 50.0% | |
| CTGTCAAAAATGGGCCAGCT+GGG | - | chr4.1:87585954-87585973 | None:intergenic | 50.0% | |
| GAGGAATTGTGCACTGGATG+TGG | + | chr4.1:87582127-87582146 | MS.gene054555:CDS | 50.0% | |
| GGAGTGGACAGACATGTTTG+AGG | + | chr4.1:87582626-87582645 | MS.gene054555:intron | 50.0% | |
| GTTACGACTCCATATGCACC+AGG | - | chr4.1:87584132-87584151 | None:intergenic | 50.0% | |
| TCTCCACAATCACTGCTGAC+TGG | + | chr4.1:87586450-87586469 | MS.gene054555:CDS | 50.0% | |
| TGAAAGCTGCCCAAGTTGTC+CGG | + | chr4.1:87583894-87583913 | MS.gene054555:CDS | 50.0% | |
| TTCAGGCTTCGTGTAGTTGG+AGG | + | chr4.1:87584772-87584791 | MS.gene054555:CDS | 50.0% | |
| ! | ATGCTTGGTGAGAATGGGAC+GGG | + | chr4.1:87584823-87584842 | MS.gene054555:CDS | 50.0% |
| ! | CTCCACAATCACTGCTGACT+GGG | + | chr4.1:87586451-87586470 | MS.gene054555:CDS | 50.0% |
| !! | ATTATAGGTTGCCGGTTCCG+AGG | + | chr4.1:87582462-87582481 | MS.gene054555:intron | 50.0% |
| !! | GGGAAAGTGCTTGGTTTGGT+TGG | + | chr4.1:87582488-87582507 | MS.gene054555:CDS | 50.0% |
| !!! | CGGCCCGGTCCTTTTTTATA+TGG | + | chr4.1:87585486-87585505 | MS.gene054555:intron | 50.0% |
| AAAACGGGGCAAGGGAACGT+GGG | + | chr4.1:87583668-87583687 | MS.gene054555:CDS | 55.0% | |
| CGTTGCCCTGTCGTCATAAC+CGG | + | chr4.1:87581953-87581972 | MS.gene054555:CDS | 55.0% | |
| GCTGTCAAAAATGGGCCAGC+TGG | - | chr4.1:87585955-87585974 | None:intergenic | 55.0% | |
| GTTTGCAGAACCCTCCTGAC+TGG | + | chr4.1:87582675-87582694 | MS.gene054555:intron | 55.0% | |
| TAAAACGGGGCAAGGGAACG+TGG | + | chr4.1:87583667-87583686 | MS.gene054555:CDS | 55.0% | |
| TAGGAGGGCAGCAACAGCAA+TGG | - | chr4.1:87583816-87583835 | None:intergenic | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | + | chr4.1:87583786-87583805 | MS.gene054555:CDS | 55.0% | |
| !! | ACAGGTGCGCCTTTTAGCTG+TGG | + | chr4.1:87582361-87582380 | MS.gene054555:intron | 55.0% |
| !! | GGGCGCTGAGATTGATTGAG+TGG | + | chr4.1:87584300-87584319 | MS.gene054555:intron | 55.0% |
| !!! | CCATATTTTTGGGCTGGGCC+GGG | - | chr4.1:87585572-87585591 | None:intergenic | 55.0% |
| !!! | GCCATATTTTTGGGCTGGGC+CGG | - | chr4.1:87585573-87585592 | None:intergenic | 55.0% |
| AAAAATGGGCCAGCTGGGCC+GGG | - | chr4.1:87585949-87585968 | None:intergenic | 60.0% | |
| AAACGGGGCAAGGGAACGTG+GGG | + | chr4.1:87583669-87583688 | MS.gene054555:CDS | 60.0% | |
| CAAAAATGGGCCAGCTGGGC+CGG | - | chr4.1:87585950-87585969 | None:intergenic | 60.0% | |
| CCCGGCCCAGCCCAAAAATA+TGG | + | chr4.1:87585569-87585588 | MS.gene054555:intron | 60.0% | |
| TTGCCCAAGCCCATTTGGCC+TGG | - | chr4.1:87585888-87585907 | None:intergenic | 60.0% | |
| !! | GCCGGGGAAAGTGCTTGGTT+TGG | + | chr4.1:87582484-87582503 | MS.gene054555:CDS | 60.0% |
| !!! | TTTTTAGGTCCCGGCCCAGC+TGG | + | chr4.1:87585560-87585579 | MS.gene054555:intron | 60.0% |
| ACTTTCCCCGGCCTCGGAAC+CGG | - | chr4.1:87582476-87582495 | None:intergenic | 65.0% | |
| CCAAGCACTTTCCCCGGCCT+CGG | - | chr4.1:87582482-87582501 | None:intergenic | 65.0% | |
| GCAGAACCCTCCTGACTGGC+AGG | + | chr4.1:87582679-87582698 | MS.gene054555:intron | 65.0% | |
| !! | TAGGTTGCCGGTTCCGAGGC+CGG | + | chr4.1:87582466-87582485 | MS.gene054555:intron | 65.0% |
| !! | AGGTTGCCGGTTCCGAGGCC+GGG | + | chr4.1:87582467-87582486 | MS.gene054555:intron | 70.0% |
| !! | CCGAGGCCGGGGAAAGTGCT+TGG | + | chr4.1:87582479-87582498 | MS.gene054555:CDS | 70.0% |
| !! | GGTTGCCGGTTCCGAGGCCG+GGG | + | chr4.1:87582468-87582487 | MS.gene054555:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 87581884 | 87586746 | 87581884 | ID=MS.gene054555 |
| chr4.1 | mRNA | 87581884 | 87586746 | 87581884 | ID=MS.gene054555.t1;Parent=MS.gene054555 |
| chr4.1 | exon | 87581884 | 87581974 | 87581884 | ID=MS.gene054555.t1.exon1;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87581884 | 87581974 | 87581884 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87582077 | 87582162 | 87582077 | ID=MS.gene054555.t1.exon2;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87582077 | 87582162 | 87582077 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87582267 | 87582364 | 87582267 | ID=MS.gene054555.t1.exon3;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87582267 | 87582364 | 87582267 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87582469 | 87582586 | 87582469 | ID=MS.gene054555.t1.exon4;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87582469 | 87582586 | 87582469 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87582683 | 87582772 | 87582683 | ID=MS.gene054555.t1.exon5;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87582683 | 87582772 | 87582683 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87583632 | 87583936 | 87583632 | ID=MS.gene054555.t1.exon6;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87583632 | 87583936 | 87583632 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87584053 | 87584248 | 87584053 | ID=MS.gene054555.t1.exon7;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87584053 | 87584248 | 87584053 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87584688 | 87584870 | 87584688 | ID=MS.gene054555.t1.exon8;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87584688 | 87584870 | 87584688 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87584958 | 87585227 | 87584958 | ID=MS.gene054555.t1.exon9;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87584958 | 87585227 | 87584958 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87586246 | 87586491 | 87586246 | ID=MS.gene054555.t1.exon10;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87586246 | 87586491 | 87586246 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| chr4.1 | exon | 87586627 | 87586746 | 87586627 | ID=MS.gene054555.t1.exon11;Parent=MS.gene054555.t1 |
| chr4.1 | CDS | 87586627 | 87586746 | 87586627 | ID=cds.MS.gene054555.t1;Parent=MS.gene054555.t1 |
| Gene Sequence |
| Protein sequence |
