Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053508.t1 | AAL99371.1 | 97 | 505 | 6 | 2 | 1 | 496 | 1 | 505 | 1.50E-279 | 971.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053508.t1 | Q9LJK1 | 65.1 | 501 | 146 | 4 | 11 | 496 | 15 | 501 | 2.9e-186 | 652.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053508.t1 | Q5DTC8 | 97.0 | 505 | 6 | 2 | 1 | 496 | 1 | 505 | 1.1e-279 | 971.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053508 | MS.gene064623 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene053508 | MS.gene62925 | 0.825755 | 3.94E-54 | -1.69E-46 |
| MS.gene053508 | MS.gene93015 | 0.81177 | 5.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053508.t1 | MTR_4g086010 | 95.248 | 505 | 14 | 3 | 1 | 496 | 1 | 504 | 0.0 | 986 |
| MS.gene053508.t1 | MTR_1g096880 | 30.556 | 144 | 95 | 3 | 223 | 362 | 257 | 399 | 3.36e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053508.t1 | AT3G19280 | 64.471 | 501 | 149 | 3 | 11 | 496 | 15 | 501 | 0.0 | 672 |
| MS.gene053508.t1 | AT1G49710 | 67.360 | 481 | 143 | 4 | 26 | 496 | 37 | 513 | 0.0 | 672 |
| MS.gene053508.t1 | AT1G71990 | 33.333 | 108 | 71 | 1 | 255 | 362 | 282 | 388 | 8.42e-13 | 70.5 |
Find 115 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGAATTTGAGGTCTTTC+AGG | 0.176747 | 4.3:+26799294 | None:intergenic |
| GGAGCAAAATCTTGAATATT+TGG | 0.188827 | 4.3:+26800721 | None:intergenic |
| TGTTCAGTGGGATGTAAATT+TGG | 0.189104 | 4.3:-26803511 | MS.gene053508:CDS |
| GGATGTAAATTTGGGTTTAA+TGG | 0.196217 | 4.3:-26803502 | MS.gene053508:CDS |
| GATGTAAATTTGGGTTTAAT+GGG | 0.244101 | 4.3:-26803501 | MS.gene053508:CDS |
| CAAGGTCGCTTCTTGAAGTC+TGG | 0.249475 | 4.3:+26800218 | None:intergenic |
| CTGAAACTGGTAAACCTTCT+TGG | 0.261326 | 4.3:+26804411 | None:intergenic |
| CAAATGCAGCCTCAGGTTTC+CGG | 0.264039 | 4.3:+26803476 | None:intergenic |
| AGTTGGTGGTGATAAGAATT+TGG | 0.276015 | 4.3:-26804204 | MS.gene053508:CDS |
| TTTCAAGGCCCTTGTGGATA+TGG | 0.277900 | 4.3:-26800312 | MS.gene053508:CDS |
| ATAAGTATACCTCAAGTAAA+TGG | 0.291681 | 4.3:+26800124 | None:intergenic |
| GTGGTTGAAGGTGATGATTT+TGG | 0.305457 | 4.3:-26804236 | MS.gene053508:CDS |
| TTCCTTCTCTCTACTCTTTG+TGG | 0.307095 | 4.3:+26800250 | None:intergenic |
| AGCTAAATTTGTAGCGCGTC+AGG | 0.312319 | 4.3:+26801613 | None:intergenic |
| GAAAGACCTCAAATTCTAAA+AGG | 0.322355 | 4.3:-26799291 | MS.gene053508:CDS |
| TCCATACAGGAACATGATTC+AGG | 0.327965 | 4.3:+26799319 | None:intergenic |
| AATGAATGATTATATGCTTC+AGG | 0.344669 | 4.3:+26800616 | None:intergenic |
| CGGAAACCTGAGGCTGCATT+TGG | 0.349184 | 4.3:-26803475 | MS.gene053508:CDS |
| GTTCAGTGGGATGTAAATTT+GGG | 0.358728 | 4.3:-26803510 | MS.gene053508:CDS |
| ACCACAAGTGCTACAAATAA+AGG | 0.376044 | 4.3:+26804344 | None:intergenic |
| TGAAACTGGTAAACCTTCTT+GGG | 0.382153 | 4.3:+26804412 | None:intergenic |
| AAATTCGACCATTTCTTCTT+CGG | 0.400382 | 4.3:+26804371 | None:intergenic |
| AACATCTCGATCGACTCTTA+TGG | 0.406384 | 4.3:-26802638 | MS.gene053508:CDS |
| GAAATTTCGAGCACCACAAT+TGG | 0.407353 | 4.3:+26802694 | None:intergenic |
| AATCAACATCCCCGTTGAAC+TGG | 0.408380 | 4.3:+26799199 | None:intergenic |
| AGAAACTTGTGAGGAGTGGT+TGG | 0.412915 | 4.3:-26804171 | MS.gene053508:CDS |
| GGTCTTTCAGGCTTCCATAC+AGG | 0.423025 | 4.3:+26799306 | None:intergenic |
| CGTAAGAACAGCAGTCTTGA+AGG | 0.425255 | 4.3:+26799353 | None:intergenic |
| TTTATACCTTCCAGTTCAAC+GGG | 0.427236 | 4.3:-26799209 | MS.gene053508:CDS |
| ACTCTTATGGTAGTTGTCAT+AGG | 0.429860 | 4.3:-26802625 | MS.gene053508:CDS |
| ATGAATGATTATATGCTTCA+GGG | 0.430093 | 4.3:+26800617 | None:intergenic |
| AAAAGGTGGTGATGAATTGA+AGG | 0.430943 | 4.3:-26799274 | MS.gene053508:CDS |
| TGCCTCTGTGTCAAGCCCGC+AGG | 0.433454 | 4.3:+26799237 | None:intergenic |
| CAACGGTTCCGAAGAAGAAA+TGG | 0.436167 | 4.3:-26804379 | MS.gene053508:CDS |
| CGGTCACGTGCGGTGGTTGA+AGG | 0.440213 | 4.3:-26804248 | MS.gene053508:CDS |
| ATCATATCTATGTGAGAGAA+AGG | 0.446491 | 4.3:-26800166 | MS.gene053508:CDS |
| CCCTGAATCATGTTCCTGTA+TGG | 0.451077 | 4.3:-26799320 | MS.gene053508:CDS |
| AGAGAGAAACTTGTGAGGAG+TGG | 0.467808 | 4.3:-26804175 | MS.gene053508:CDS |
| GGAACTATCCCTGTGGTTGT+TGG | 0.468275 | 4.3:-26800748 | MS.gene053508:CDS |
| ATATTCAAGGAACTTTAATA+CGG | 0.469139 | 4.3:-26804129 | MS.gene053508:CDS |
| GCCTTTATTTGTAGCACTTG+TGG | 0.470674 | 4.3:-26804345 | MS.gene053508:CDS |
| TTGCCGCCTTTGCATTCACT+TGG | 0.471450 | 4.3:-26800273 | MS.gene053508:CDS |
| TCATATCTATGTGAGAGAAA+GGG | 0.471718 | 4.3:-26800165 | MS.gene053508:CDS |
| GTTGTTGAAGAAACTGAAAC+TGG | 0.471818 | 4.3:+26804398 | None:intergenic |
| TGCTAGGTATCTCATGGACT+TGG | 0.478874 | 4.3:+26800645 | None:intergenic |
| CTTAATAGGTGGAAGTATGA+AGG | 0.479545 | 4.3:-26800347 | MS.gene053508:intron |
| TGAGGAGTGGTTGGAGAGAG+AGG | 0.482262 | 4.3:-26804162 | MS.gene053508:CDS |
| AGGGCCATCTGATTCTTTCA+AGG | 0.483149 | 4.3:-26800327 | MS.gene053508:CDS |
| AATTTGGGTTTAATGGGGAC+CGG | 0.493352 | 4.3:-26803495 | MS.gene053508:CDS |
| AAGGTCGCTTCTTGAAGTCT+GGG | 0.499184 | 4.3:+26800219 | None:intergenic |
| TGTTGATTTCAGAAGTCACT+TGG | 0.501731 | 4.3:-26799184 | MS.gene053508:CDS |
| CTTTATACCTTCCAGTTCAA+CGG | 0.510464 | 4.3:-26799210 | MS.gene053508:CDS |
| TTTGGCTTACCTCAGCAAGC+TGG | 0.521291 | 4.3:-26803457 | MS.gene053508:CDS |
| GCCTCTGTGTCAAGCCCGCA+GGG | 0.522965 | 4.3:+26799238 | None:intergenic |
| CCATACCAGCAACAAGCGAC+TGG | 0.524286 | 4.3:+26801541 | None:intergenic |
| TTTATATATCAAAGAACTAG+AGG | 0.526597 | 4.3:-26800683 | MS.gene053508:CDS |
| GGGCTTCGAGAGCTTGCAAT+CGG | 0.529518 | 4.3:+26802672 | None:intergenic |
| CAGATCTAGCAATTTAACTC+TGG | 0.532467 | 4.3:-26799379 | MS.gene053508:CDS |
| CGACCTTGCAAGTGCACTCG+AGG | 0.534412 | 4.3:-26800203 | MS.gene053508:CDS |
| CTATCATCTGACGTCCCTGT+TGG | 0.535464 | 4.3:-26802797 | MS.gene053508:CDS |
| AGGATGCTGTTACATATTCA+AGG | 0.538103 | 4.3:-26804142 | MS.gene053508:CDS |
| AGAAAGGGGAACATTTGAGA+TGG | 0.538112 | 4.3:-26800150 | MS.gene053508:CDS |
| GACCCTCGAGTGCACTTGCA+AGG | 0.544331 | 4.3:+26800200 | None:intergenic |
| AGATGGAGTCCATTTACTTG+AGG | 0.544735 | 4.3:-26800133 | MS.gene053508:intron |
| GCAAAATCTTGAATATTTGG+AGG | 0.547789 | 4.3:+26800724 | None:intergenic |
| GCTAAATTTGTAGCGCGTCA+GGG | 0.548640 | 4.3:+26801614 | None:intergenic |
| CATAGGAATCGTGATGGAAG+AGG | 0.549344 | 4.3:-26802608 | MS.gene053508:intron |
| GGTAAGCCAAATGCAGCCTC+AGG | 0.550885 | 4.3:+26803469 | None:intergenic |
| AGTTTCAGTTTCTTCAACAA+CGG | 0.551370 | 4.3:-26804396 | MS.gene053508:CDS |
| CCATACAGGAACATGATTCA+GGG | 0.555223 | 4.3:+26799320 | None:intergenic |
| AGCAAGTGTTCTGAGATCAA+TGG | 0.556001 | 4.3:-26803431 | MS.gene053508:CDS |
| TGATTCTTTCAAGGCCCTTG+TGG | 0.557750 | 4.3:-26800318 | MS.gene053508:CDS |
| CTTCAACCACCGCACGTGAC+CGG | 0.560057 | 4.3:+26804249 | None:intergenic |
| GCTTACCCACCGTCGTGCCA+TGG | 0.563480 | 4.3:+26803375 | None:intergenic |
| TTAATAGGTGGAAGTATGAA+GGG | 0.568822 | 4.3:-26800346 | MS.gene053508:intron |
| ATGTAAATTTGGGTTTAATG+GGG | 0.569442 | 4.3:-26803500 | MS.gene053508:CDS |
| CATATCTATGTGAGAGAAAG+GGG | 0.571252 | 4.3:-26800164 | MS.gene053508:CDS |
| TGGTTGCTGACTTGTTCTAC+CGG | 0.572262 | 4.3:-26804268 | MS.gene053508:CDS |
| TTTGGAGGACCAACAACCAC+AGG | 0.573436 | 4.3:+26800739 | None:intergenic |
| ACAACAACAACAACCCAAGA+AGG | 0.574015 | 4.3:-26804425 | MS.gene053508:CDS |
| TGTAGCACTTGTGGTTATTG+CGG | 0.574927 | 4.3:-26804336 | MS.gene053508:CDS |
| ATGGGCTGAGTATGACATCA+TGG | 0.579350 | 4.3:-26802765 | MS.gene053508:CDS |
| GAATGGAAGTCATGTTCAGT+GGG | 0.580562 | 4.3:-26803523 | MS.gene053508:CDS |
| TATGGCTAAGAACGCAGCTA+TGG | 0.583698 | 4.3:-26804288 | MS.gene053508:CDS |
| TTTGGGTTAGAGACAGTTGG+TGG | 0.590171 | 4.3:-26804218 | MS.gene053508:CDS |
| GTTTACAAAATATACCCTGC+GGG | 0.597021 | 4.3:-26799252 | MS.gene053508:CDS |
| GTTCTACCGGTCACGTGCGG+TGG | 0.597759 | 4.3:-26804255 | MS.gene053508:CDS |
| AGGGACGTCAGATGATAGAC+TGG | 0.597764 | 4.3:+26802802 | None:intergenic |
| ATTACTTCAAACTTGGCACA+AGG | 0.599899 | 4.3:+26799153 | None:intergenic |
| AGACCTCAAATTCTAAAAGG+TGG | 0.608431 | 4.3:-26799288 | MS.gene053508:CDS |
| CTTGCTGTTCCAGCTTGCTG+AGG | 0.609503 | 4.3:+26803448 | None:intergenic |
| AACATCCCCGTTGAACTGGA+AGG | 0.611381 | 4.3:+26799203 | None:intergenic |
| ATTTGAAAATTCTAACGAGG+AGG | 0.613665 | 4.3:-26801586 | MS.gene053508:CDS |
| GGCCACAAAGAGTAGAGAGA+AGG | 0.614704 | 4.3:-26800252 | MS.gene053508:CDS |
| ATTAGAGAGAGAAACTTGTG+AGG | 0.617371 | 4.3:-26804180 | MS.gene053508:CDS |
| TGTTCTGAGATCAATGGAGT+CGG | 0.617911 | 4.3:-26803425 | MS.gene053508:CDS |
| GGAATGGAAGTCATGTTCAG+TGG | 0.622651 | 4.3:-26803524 | MS.gene053508:CDS |
| AGTTGTCATAGGAATCGTGA+TGG | 0.623002 | 4.3:-26802614 | MS.gene053508:CDS |
| TGCAGAGAACAATCTTGCCA+TGG | 0.638573 | 4.3:-26803392 | MS.gene053508:CDS |
| AAGCATATAATCATTCATTG+AGG | 0.644737 | 4.3:-26800612 | MS.gene053508:intron |
| TTGTGGCCAAGTGAATGCAA+AGG | 0.647931 | 4.3:+26800267 | None:intergenic |
| TGGCCAAGTGAATGCAAAGG+CGG | 0.648142 | 4.3:+26800270 | None:intergenic |
| GACCTTGCAAGTGCACTCGA+GGG | 0.651570 | 4.3:-26800202 | MS.gene053508:CDS |
| GTACAGCTGCCATATCCACA+AGG | 0.653261 | 4.3:+26800303 | None:intergenic |
| AGGGCCTTGAAAGAATCAGA+TGG | 0.655557 | 4.3:+26800323 | None:intergenic |
| TAATGGGGACCGGAAACCTG+AGG | 0.665866 | 4.3:-26803485 | MS.gene053508:CDS |
| CTTGTTCTACCGGTCACGTG+CGG | 0.672406 | 4.3:-26804258 | MS.gene053508:CDS |
| AGCATTTGAAAATTCTAACG+AGG | 0.673819 | 4.3:-26801589 | MS.gene053508:CDS |
| ACCCTGCGGGCTTGACACAG+AGG | 0.679828 | 4.3:-26799239 | MS.gene053508:CDS |
| TTGGAGGACCAACAACCACA+GGG | 0.701308 | 4.3:+26800740 | None:intergenic |
| TACAGCTGCCATATCCACAA+GGG | 0.711712 | 4.3:+26800304 | None:intergenic |
| ACAATCTTGCCATGGCACGA+CGG | 0.711769 | 4.3:-26803384 | MS.gene053508:intron |
| TGTTGTAGGAACTATCCCTG+TGG | 0.713149 | 4.3:-26800755 | MS.gene053508:intron |
| GGTTTACAAAATATACCCTG+CGG | 0.717875 | 4.3:-26799253 | MS.gene053508:CDS |
| TTATACCTTCCAGTTCAACG+GGG | 0.752006 | 4.3:-26799208 | MS.gene053508:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAAATTAAAAGTTATTT+TGG | - | chr4.3:26802175-26802194 | MS.gene053508:intron | 10.0% |
| !!! | AATAACTTTTAATTTGTTTT+TGG | + | chr4.3:26802174-26802193 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATTGAAAT+AGG | + | chr4.3:26800692-26800711 | None:intergenic | 10.0% |
| !! | TTGATATATAAAAATGAATC+AGG | + | chr4.3:26802895-26802914 | None:intergenic | 15.0% |
| !!! | AAATCAAAATATCCATATTT+TGG | + | chr4.3:26799919-26799938 | None:intergenic | 15.0% |
| !!! | AACTTTATTTAAAAGAATGA+AGG | - | chr4.3:26801562-26801581 | MS.gene053508:CDS | 15.0% |
| !!! | TATGATACTATTTATTTCTT+AGG | + | chr4.3:26803641-26803660 | None:intergenic | 15.0% |
| !!! | TATTTGATCGTAATTTATTT+TGG | + | chr4.3:26803552-26803571 | None:intergenic | 15.0% |
| !!! | TTAGTCGTTTTTATAATTTT+AGG | - | chr4.3:26802344-26802363 | MS.gene053508:intron | 15.0% |
| !! | AAACAAAAATTATGGTACAT+TGG | - | chr4.3:26802518-26802537 | MS.gene053508:intron | 20.0% |
| !! | AACAAAAATTATGGTACATT+GGG | - | chr4.3:26802519-26802538 | MS.gene053508:intron | 20.0% |
| !! | AATATTGCAGTATATAATCT+GGG | - | chr4.3:26803126-26803145 | MS.gene053508:intron | 20.0% |
| !! | AATTGTCATACATAAACAAT+GGG | + | chr4.3:26801856-26801875 | None:intergenic | 20.0% |
| !! | ACTTATTTGAATTTATCTAC+TGG | + | chr4.3:26804073-26804092 | None:intergenic | 20.0% |
| !! | ATATTCAAGGAACTTTAATA+CGG | - | chr4.3:26799457-26799476 | MS.gene053508:intron | 20.0% |
| !! | ATTATATACTGCAATATTCT+AGG | + | chr4.3:26803124-26803143 | None:intergenic | 20.0% |
| !! | GTGAATAAATTTCATCAAAA+AGG | + | chr4.3:26799711-26799730 | None:intergenic | 20.0% |
| !! | TAATTGTCATACATAAACAA+TGG | + | chr4.3:26801857-26801876 | None:intergenic | 20.0% |
| !! | TTGATGAAAACTAAAAACAA+AGG | + | chr4.3:26800631-26800650 | None:intergenic | 20.0% |
| !! | TTTATATATCAAAGAACTAG+AGG | - | chr4.3:26802903-26802922 | MS.gene053508:intron | 20.0% |
| !!! | AATGTACCATAATTTTTGTT+TGG | + | chr4.3:26802519-26802538 | None:intergenic | 20.0% |
| !!! | ATAATGCTTTTTGAAAGAAT+TGG | - | chr4.3:26801632-26801651 | MS.gene053508:CDS | 20.0% |
| !!! | ATTTGGTTTTAAAATGTGAA+TGG | - | chr4.3:26803161-26803180 | MS.gene053508:intron | 20.0% |
| !!! | TATCTGAAAAATGTTGTTTT+TGG | - | chr4.3:26799890-26799909 | MS.gene053508:intron | 20.0% |
| !!! | TCAGATGAAGAATTTTAAAA+GGG | - | chr4.3:26801367-26801386 | MS.gene053508:intron | 20.0% |
| !!! | TGTTTTAATATAATCTATCC+TGG | - | chr4.3:26803957-26803976 | MS.gene053508:intron | 20.0% |
| !!! | TTTGAAGTAATTTTTGTGTA+GGG | - | chr4.3:26804445-26804464 | MS.gene053508:CDS | 20.0% |
| !!! | TTTTTGTATTTTGTGATTTG+TGG | - | chr4.3:26803197-26803216 | MS.gene053508:intron | 20.0% |
| ! | AAAACATCATAATCAGACAT+TGG | + | chr4.3:26801036-26801055 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr4.3:26800318-26800337 | MS.gene053508:CDS | 25.0% |
| ! | AAGCATATAATCATTCATTG+AGG | - | chr4.3:26802974-26802993 | MS.gene053508:intron | 25.0% |
| ! | AAGTGAATTTCCATGTATAA+TGG | - | chr4.3:26802704-26802723 | MS.gene053508:CDS | 25.0% |
| ! | AATAAGCAGAAAAGAACTTA+TGG | - | chr4.3:26803992-26804011 | MS.gene053508:intron | 25.0% |
| ! | AATGAATGATTATATGCTTC+AGG | + | chr4.3:26802973-26802992 | None:intergenic | 25.0% |
| ! | ACAAAAATTCATTGGAAGTT+TGG | + | chr4.3:26801884-26801903 | None:intergenic | 25.0% |
| ! | ATAAGTATACCTCAAGTAAA+TGG | + | chr4.3:26803465-26803484 | None:intergenic | 25.0% |
| ! | ATGAATGATTATATGCTTCA+GGG | + | chr4.3:26802972-26802991 | None:intergenic | 25.0% |
| ! | ATGGAATAAGCTAAAATGAT+AGG | + | chr4.3:26804128-26804147 | None:intergenic | 25.0% |
| ! | ATGTGTTGAATTTGAATAAC+TGG | + | chr4.3:26802105-26802124 | None:intergenic | 25.0% |
| ! | ATTTAAAAGAATGAAGGAGT+TGG | - | chr4.3:26801568-26801587 | MS.gene053508:CDS | 25.0% |
| ! | CACAAAAATTACTTCAAACT+TGG | + | chr4.3:26804443-26804462 | None:intergenic | 25.0% |
| ! | CATCAAGATTTATAAATGAG+AGG | - | chr4.3:26801290-26801309 | MS.gene053508:intron | 25.0% |
| ! | CATGTGAATTATTTGTATCA+AGG | - | chr4.3:26799665-26799684 | MS.gene053508:intron | 25.0% |
| ! | CTTCAACTCTAAATAAACTT+TGG | + | chr4.3:26802266-26802285 | None:intergenic | 25.0% |
| ! | CTTGATACAAATAATTCACA+TGG | + | chr4.3:26799667-26799686 | None:intergenic | 25.0% |
| ! | GAAAGGAAGAAACAAAAAAT+GGG | + | chr4.3:26801468-26801487 | None:intergenic | 25.0% |
| ! | GAATATCATATGATTGTGTT+TGG | - | chr4.3:26803731-26803750 | MS.gene053508:intron | 25.0% |
| ! | GAATATTGCAGTATATAATC+TGG | - | chr4.3:26803125-26803144 | MS.gene053508:intron | 25.0% |
| ! | GATGAACCAAACAAAAATTA+TGG | - | chr4.3:26802510-26802529 | MS.gene053508:intron | 25.0% |
| ! | GTTATCATTATGTTATCTCA+TGG | + | chr4.3:26804165-26804184 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr4.3:26800358-26800377 | None:intergenic | 25.0% |
| ! | TAAAATGATAGGTACCATAA+TGG | + | chr4.3:26804117-26804136 | None:intergenic | 25.0% |
| ! | TAAACTTTAACTCAGTGATT+TGG | - | chr4.3:26801398-26801417 | MS.gene053508:intron | 25.0% |
| ! | TACGAACAACAAAAATTCAT+TGG | + | chr4.3:26801892-26801911 | None:intergenic | 25.0% |
| ! | TAGAGAAAAAATTGTCTTTC+AGG | + | chr4.3:26802615-26802634 | None:intergenic | 25.0% |
| ! | TAGTATCATATGATTGTGTT+TGG | - | chr4.3:26803651-26803670 | MS.gene053508:intron | 25.0% |
| ! | TATAAAAATGAATCAGGAGA+AGG | + | chr4.3:26802889-26802908 | None:intergenic | 25.0% |
| ! | TGAAAACAAACAAGTTTCTT+CGG | - | chr4.3:26803010-26803029 | MS.gene053508:intron | 25.0% |
| ! | TTATCCTTGAAGATCTATAT+TGG | - | chr4.3:26801685-26801704 | MS.gene053508:intron | 25.0% |
| ! | TTATTCAAATTCAACACATG+TGG | - | chr4.3:26802106-26802125 | MS.gene053508:intron | 25.0% |
| !! | AAATTTTCCACCATTATACA+TGG | + | chr4.3:26802717-26802736 | None:intergenic | 25.0% |
| !! | ATGTAAATTTGGGTTTAATG+GGG | - | chr4.3:26800086-26800105 | MS.gene053508:intron | 25.0% |
| !! | CATAAAATTTTCACAACTGA+TGG | + | chr4.3:26802226-26802245 | None:intergenic | 25.0% |
| !! | GAGAAGTTATTTCAAAAACT+AGG | + | chr4.3:26801163-26801182 | None:intergenic | 25.0% |
| !! | GATGTAAATTTGGGTTTAAT+GGG | - | chr4.3:26800085-26800104 | MS.gene053508:intron | 25.0% |
| !! | GTCAGATGAAGAATTTTAAA+AGG | - | chr4.3:26801366-26801385 | MS.gene053508:intron | 25.0% |
| !! | GTTGATTCATTACATTTGAT+TGG | - | chr4.3:26800247-26800266 | MS.gene053508:CDS | 25.0% |
| !! | TTTAAAATTCTTCATCTGAC+AGG | + | chr4.3:26801366-26801385 | None:intergenic | 25.0% |
| !!! | AATATTCTAGGATCCAATTA+TGG | + | chr4.3:26803112-26803131 | None:intergenic | 25.0% |
| !!! | AATGGTGGAAAATTTTATAG+CGG | - | chr4.3:26802722-26802741 | MS.gene053508:CDS | 25.0% |
| !!! | ACTCATTATTTTGACACAAA+TGG | - | chr4.3:26804183-26804202 | MS.gene053508:CDS | 25.0% |
| !!! | ATCAGAAAGCATTTTATACA+TGG | + | chr4.3:26801189-26801208 | None:intergenic | 25.0% |
| !!! | CTCATTATTTTGACACAAAT+GGG | - | chr4.3:26804184-26804203 | MS.gene053508:CDS | 25.0% |
| !!! | GTTGTTGTTGTATTTTAGTA+TGG | - | chr4.3:26800441-26800460 | MS.gene053508:intron | 25.0% |
| !!! | GTTTGAAGTAATTTTTGTGT+AGG | - | chr4.3:26804444-26804463 | MS.gene053508:CDS | 25.0% |
| !!! | TTCGTTTTTCTTGTTTTCTA+AGG | - | chr4.3:26800657-26800676 | MS.gene053508:CDS | 25.0% |
| !!! | TTTTCAGTTTTTGGCTTTAT+CGG | + | chr4.3:26800849-26800868 | None:intergenic | 25.0% |
| AAATTCGACCATTTCTTCTT+CGG | + | chr4.3:26799218-26799237 | None:intergenic | 30.0% | |
| AACACCAATATAGATCTTCA+AGG | + | chr4.3:26801692-26801711 | None:intergenic | 30.0% | |
| AACATACCCTAAATCCATTA+TGG | - | chr4.3:26804100-26804119 | MS.gene053508:intron | 30.0% | |
| AACATTTGATCCATAGATCT+TGG | - | chr4.3:26801267-26801286 | MS.gene053508:intron | 30.0% | |
| AATATGACGCAATGGTATAT+TGG | + | chr4.3:26802668-26802687 | None:intergenic | 30.0% | |
| AATCTTCAAGGATGATTGTT+TGG | + | chr4.3:26801719-26801738 | None:intergenic | 30.0% | |
| ACATAATGACTTAATACGAG+AGG | + | chr4.3:26803057-26803076 | None:intergenic | 30.0% | |
| ACTTCATAAGAACAATAACC+AGG | + | chr4.3:26800004-26800023 | None:intergenic | 30.0% | |
| AGCATTTGAAAATTCTAACG+AGG | - | chr4.3:26801997-26802016 | MS.gene053508:intron | 30.0% | |
| AGTACTTGTGTTAAACTTGA+TGG | - | chr4.3:26803586-26803605 | MS.gene053508:intron | 30.0% | |
| AGTTGTAGCAAATTTGTGTT+TGG | - | chr4.3:26799594-26799613 | MS.gene053508:intron | 30.0% | |
| AGTTTCAGTTTCTTCAACAA+CGG | - | chr4.3:26799190-26799209 | MS.gene053508:CDS | 30.0% | |
| ATACTAGATCAGATTCAGAT+GGG | + | chr4.3:26802431-26802450 | None:intergenic | 30.0% | |
| ATCAAGTTTAACACAAGTAC+TGG | + | chr4.3:26803587-26803606 | None:intergenic | 30.0% | |
| ATCTTCAAGGATGATTGTTT+GGG | + | chr4.3:26801718-26801737 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | + | chr4.3:26803699-26803718 | None:intergenic | 30.0% | |
| ATTCACAAGCTAGATGATTA+TGG | - | chr4.3:26799725-26799744 | MS.gene053508:intron | 30.0% | |
| ATTTATTTACATTGCACCGA+AGG | - | chr4.3:26803078-26803097 | MS.gene053508:intron | 30.0% | |
| ATTTGAAAATTCTAACGAGG+AGG | - | chr4.3:26802000-26802019 | MS.gene053508:intron | 30.0% | |
| CATAATGACTTAATACGAGA+GGG | + | chr4.3:26803056-26803075 | None:intergenic | 30.0% | |
| CATGGCATTCTTAATAAAGA+TGG | + | chr4.3:26804147-26804166 | None:intergenic | 30.0% | |
| GAAACAAAAGTTCAAGAAAG+TGG | + | chr4.3:26801610-26801629 | None:intergenic | 30.0% | |
| GAAAGACCTCAAATTCTAAA+AGG | - | chr4.3:26804295-26804314 | MS.gene053508:CDS | 30.0% | |
| GCAAAATCTTGAATATTTGG+AGG | + | chr4.3:26802865-26802884 | None:intergenic | 30.0% | |
| GGAAAGGAAGAAACAAAAAA+TGG | + | chr4.3:26801469-26801488 | None:intergenic | 30.0% | |
| GGAGCAAAATCTTGAATATT+TGG | + | chr4.3:26802868-26802887 | None:intergenic | 30.0% | |
| GGATAAACAGCTTAATTAAG+CGG | - | chr4.3:26803703-26803722 | MS.gene053508:intron | 30.0% | |
| GGGAAAATAGAGAAATCAAA+GGG | + | chr4.3:26801448-26801467 | None:intergenic | 30.0% | |
| GTTATTAGTTCATTCAATGC+AGG | - | chr4.3:26800041-26800060 | MS.gene053508:intron | 30.0% | |
| TAAATGTGCAAAATCCAGTA+TGG | - | chr4.3:26801817-26801836 | MS.gene053508:intron | 30.0% | |
| TATAGTAGAATATGACGCAA+TGG | + | chr4.3:26802676-26802695 | None:intergenic | 30.0% | |
| TCATCCTTGAAGATTTATAC+TGG | - | chr4.3:26801724-26801743 | MS.gene053508:intron | 30.0% | |
| TGAATTTCCATGTATAATGG+TGG | - | chr4.3:26802707-26802726 | MS.gene053508:CDS | 30.0% | |
| TGAGTTATCTTCTTAATAGG+TGG | - | chr4.3:26803228-26803247 | MS.gene053508:intron | 30.0% | |
| TGCTGAGTTATCTTCTTAAT+AGG | - | chr4.3:26803225-26803244 | MS.gene053508:intron | 30.0% | |
| TGGGAAAATAGAGAAATCAA+AGG | + | chr4.3:26801449-26801468 | None:intergenic | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | + | chr4.3:26803698-26803717 | None:intergenic | 30.0% | |
| TTCAGTGACAAGTTTAATCA+TGG | - | chr4.3:26799938-26799957 | MS.gene053508:intron | 30.0% | |
| TTTCTTTGTCATTGTCTACT+AGG | - | chr4.3:26800736-26800755 | MS.gene053508:CDS | 30.0% | |
| ! | AAGCTCAATTTTGGATAACT+TGG | - | chr4.3:26802283-26802302 | MS.gene053508:intron | 30.0% |
| ! | AATTATGGTGTTAAGTCCTT+CGG | + | chr4.3:26803097-26803116 | None:intergenic | 30.0% |
| ! | AGAATGCAAAGTATTAATGC+AGG | + | chr4.3:26802472-26802491 | None:intergenic | 30.0% |
| ! | ATGATTCTATTTTGTTGCAG+TGG | - | chr4.3:26801937-26801956 | MS.gene053508:intron | 30.0% |
| ! | GAAACTTTTGTGGTTTAATG+TGG | - | chr4.3:26800499-26800518 | MS.gene053508:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr4.3:26800323-26800342 | None:intergenic | 30.0% |
| ! | GACTTTTCATATCGAATTGT+TGG | + | chr4.3:26801778-26801797 | None:intergenic | 30.0% |
| ! | GCATTATCTTGTTTGGAATA+CGG | - | chr4.3:26801089-26801108 | MS.gene053508:intron | 30.0% |
| ! | GGATGTAAATTTGGGTTTAA+TGG | - | chr4.3:26800084-26800103 | MS.gene053508:intron | 30.0% |
| ! | TGGTTTTTGATAGAACGTTA+TGG | - | chr4.3:26800362-26800381 | MS.gene053508:intron | 30.0% |
| ! | TTAATAGGTGGAAGTATGAA+GGG | - | chr4.3:26803240-26803259 | MS.gene053508:intron | 30.0% |
| ! | TTAGAGTTGAAGCTCAATTT+TGG | - | chr4.3:26802274-26802293 | MS.gene053508:intron | 30.0% |
| ! | TTTAGAATTTGAGGTCTTTC+AGG | + | chr4.3:26804295-26804314 | None:intergenic | 30.0% |
| ! | TTTTGCTGCATTATCTTGTT+TGG | - | chr4.3:26801082-26801101 | MS.gene053508:intron | 30.0% |
| ! | TTTTGTGGTTTATTTCCTGA+TGG | - | chr4.3:26799796-26799815 | MS.gene053508:intron | 30.0% |
| !! | ATAGGTACCATAATGGATTT+AGG | + | chr4.3:26804110-26804129 | None:intergenic | 30.0% |
| !! | ATGCTTTTTGAAAGAATTGG+TGG | - | chr4.3:26801635-26801654 | MS.gene053508:intron | 30.0% |
| !! | ATGGTGGAAAATTTTATAGC+GGG | - | chr4.3:26802723-26802742 | MS.gene053508:CDS | 30.0% |
| !! | TAGGTACCATAATGGATTTA+GGG | + | chr4.3:26804109-26804128 | None:intergenic | 30.0% |
| !! | TATCTTCTCTCATTTTTGAC+TGG | - | chr4.3:26800551-26800570 | MS.gene053508:intron | 30.0% |
| !! | TGCTTTTTGAAAGAATTGGT+GGG | - | chr4.3:26801636-26801655 | MS.gene053508:intron | 30.0% |
| !! | TTTTGACTGGATTTAAAACC+AGG | - | chr4.3:26800564-26800583 | MS.gene053508:intron | 30.0% |
| !!! | AAACACTTTTGAGACTGTTA+GGG | + | chr4.3:26804047-26804066 | None:intergenic | 30.0% |
| !!! | CGAGATGTTTGTTTTTTCTA+GGG | + | chr4.3:26800937-26800956 | None:intergenic | 30.0% |
| !!! | TAAACACTTTTGAGACTGTT+AGG | + | chr4.3:26804048-26804067 | None:intergenic | 30.0% |
| !!! | TCGAGATGTTTGTTTTTTCT+AGG | + | chr4.3:26800938-26800957 | None:intergenic | 30.0% |
| AAACTTTGGCAATTGCATTG+CGG | + | chr4.3:26802252-26802271 | None:intergenic | 35.0% | |
| AACGCCAGTATAAATCTTCA+AGG | + | chr4.3:26801731-26801750 | None:intergenic | 35.0% | |
| AAGATAATGCAGCAAAAGTG+GGG | + | chr4.3:26801079-26801098 | None:intergenic | 35.0% | |
| AAGCATATTCAAACTCAACC+AGG | - | chr4.3:26799754-26799773 | MS.gene053508:intron | 35.0% | |
| AATCTTGATGCCAAGATCTA+TGG | + | chr4.3:26801280-26801299 | None:intergenic | 35.0% | |
| ACAAGATAATGCAGCAAAAG+TGG | + | chr4.3:26801081-26801100 | None:intergenic | 35.0% | |
| ACATGTGGAATAGTTGTTCA+AGG | - | chr4.3:26802121-26802140 | MS.gene053508:intron | 35.0% | |
| ACCACAAGTGCTACAAATAA+AGG | + | chr4.3:26799245-26799264 | None:intergenic | 35.0% | |
| ACTCTTATGGTAGTTGTCAT+AGG | - | chr4.3:26800961-26800980 | MS.gene053508:intron | 35.0% | |
| AGATTAAGAACAGCTTAACC+TGG | + | chr4.3:26799775-26799794 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr4.3:26800330-26800349 | MS.gene053508:CDS | 35.0% | |
| AGGATGCTGTTACATATTCA+AGG | - | chr4.3:26799444-26799463 | MS.gene053508:intron | 35.0% | |
| ATAGTTCCATGGAAATGTGT+GGG | - | chr4.3:26800468-26800487 | MS.gene053508:intron | 35.0% | |
| ATGGTACATTGGGTAGTAAA+TGG | - | chr4.3:26802529-26802548 | MS.gene053508:intron | 35.0% | |
| ATTACTTCAAACTTGGCACA+AGG | + | chr4.3:26804436-26804455 | None:intergenic | 35.0% | |
| ATTAGAGAGAGAAACTTGTG+AGG | - | chr4.3:26799406-26799425 | MS.gene053508:intron | 35.0% | |
| ATTCTTCATCTGACAGGATT+AGG | + | chr4.3:26801360-26801379 | None:intergenic | 35.0% | |
| CAAAAGTTCAAGAAAGTGGA+AGG | + | chr4.3:26801606-26801625 | None:intergenic | 35.0% | |
| CAAGATAATGCAGCAAAAGT+GGG | + | chr4.3:26801080-26801099 | None:intergenic | 35.0% | |
| CAGATCTAGCAATTTAACTC+TGG | - | chr4.3:26804207-26804226 | MS.gene053508:CDS | 35.0% | |
| CATGTGGAATAGTTGTTCAA+GGG | - | chr4.3:26802122-26802141 | MS.gene053508:intron | 35.0% | |
| CCCATGAAAAATATCCAACA+GGG | + | chr4.3:26800806-26800825 | None:intergenic | 35.0% | |
| CTGATGGAGAAAAAACCAAA+TGG | + | chr4.3:26802210-26802229 | None:intergenic | 35.0% | |
| CTGGTAAATGAAAGTAAGAG+AGG | + | chr4.3:26802086-26802105 | None:intergenic | 35.0% | |
| CTTTATACCTTCCAGTTCAA+CGG | - | chr4.3:26804376-26804395 | MS.gene053508:CDS | 35.0% | |
| GAAGGACTTAACACCATAAT+TGG | - | chr4.3:26803096-26803115 | MS.gene053508:intron | 35.0% | |
| GATACTAGATCAGATTCAGA+TGG | + | chr4.3:26802432-26802451 | None:intergenic | 35.0% | |
| GATCTAGTATCAGTGTCTAT+TGG | - | chr4.3:26802441-26802460 | MS.gene053508:intron | 35.0% | |
| GGATTAGGCATTAAGTTTAC+AGG | + | chr4.3:26801345-26801364 | None:intergenic | 35.0% | |
| GGTTTACAAAATATACCCTG+CGG | - | chr4.3:26804333-26804352 | MS.gene053508:CDS | 35.0% | |
| GTTCAGTGGGATGTAAATTT+GGG | - | chr4.3:26800076-26800095 | MS.gene053508:intron | 35.0% | |
| GTTGTTGAAGAAACTGAAAC+TGG | + | chr4.3:26799191-26799210 | None:intergenic | 35.0% | |
| GTTTACAAAATATACCCTGC+GGG | - | chr4.3:26804334-26804353 | MS.gene053508:CDS | 35.0% | |
| TAAAGCAGCATTGTCTAAGA+TGG | + | chr4.3:26802400-26802419 | None:intergenic | 35.0% | |
| TAGTTCATTCAATGCAGGAA+TGG | - | chr4.3:26800046-26800065 | MS.gene053508:intron | 35.0% | |
| TATAGTTCCATGGAAATGTG+TGG | - | chr4.3:26800467-26800486 | MS.gene053508:intron | 35.0% | |
| TATTCACATATGTTACCTCC+TGG | - | chr4.3:26799983-26800002 | MS.gene053508:intron | 35.0% | |
| TCATAAGAACAATAACCAGG+AGG | + | chr4.3:26800001-26800020 | None:intergenic | 35.0% | |
| TGAAACTGGTAAACCTTCTT+GGG | + | chr4.3:26799177-26799196 | None:intergenic | 35.0% | |
| TGTTCAGTGGGATGTAAATT+TGG | - | chr4.3:26800075-26800094 | MS.gene053508:intron | 35.0% | |
| TGTTTCTTCCTTTCCTTCTT+GGG | - | chr4.3:26801474-26801493 | MS.gene053508:intron | 35.0% | |
| TTTATACCTTCCAGTTCAAC+GGG | - | chr4.3:26804377-26804396 | MS.gene053508:CDS | 35.0% | |
| TTTGTCATTGTCTACTAGGA+GGG | - | chr4.3:26800740-26800759 | MS.gene053508:CDS | 35.0% | |
| ! | AAAAGGTGGTGATGAATTGA+AGG | - | chr4.3:26804312-26804331 | MS.gene053508:CDS | 35.0% |
| ! | AGACCTCAAATTCTAAAAGG+TGG | - | chr4.3:26804298-26804317 | MS.gene053508:CDS | 35.0% |
| ! | AGTATGGTTCTATAGTTCCA+TGG | - | chr4.3:26800457-26800476 | MS.gene053508:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4.3:26800342-26800361 | MS.gene053508:CDS | 35.0% |
| ! | CCCTGTTGGATATTTTTCAT+GGG | - | chr4.3:26800803-26800822 | MS.gene053508:intron | 35.0% |
| ! | CTTAATAGGTGGAAGTATGA+AGG | - | chr4.3:26803239-26803258 | MS.gene053508:intron | 35.0% |
| ! | GAACAATTTCAAGTCCATAC+TGG | + | chr4.3:26801834-26801853 | None:intergenic | 35.0% |
| ! | GCAAATCAATCTCTTGTTGT+AGG | - | chr4.3:26802817-26802836 | MS.gene053508:CDS | 35.0% |
| ! | GCTGTTCTTAATCTGTTTTG+TGG | - | chr4.3:26799781-26799800 | MS.gene053508:intron | 35.0% |
| ! | TCCCTGTTGGATATTTTTCA+TGG | - | chr4.3:26800802-26800821 | MS.gene053508:intron | 35.0% |
| ! | TGGTGGAAAATTTTATAGCG+GGG | - | chr4.3:26802724-26802743 | MS.gene053508:CDS | 35.0% |
| ! | TGGTTGAAGGTGATGATTTT+GGG | - | chr4.3:26799351-26799370 | MS.gene053508:CDS | 35.0% |
| ! | TTAAACTTGATGGCATCTCT+TGG | - | chr4.3:26803596-26803615 | MS.gene053508:intron | 35.0% |
| ! | TTATCTTGTTTGGAATACGG+AGG | - | chr4.3:26801092-26801111 | MS.gene053508:intron | 35.0% |
| ! | TTGTTTCTTCCTTTCCTTCT+TGG | - | chr4.3:26801473-26801492 | MS.gene053508:intron | 35.0% |
| !! | AGTTGGTGGTGATAAGAATT+TGG | - | chr4.3:26799382-26799401 | MS.gene053508:intron | 35.0% |
| !! | GCTTTTTGAAAGAATTGGTG+GGG | - | chr4.3:26801637-26801656 | MS.gene053508:intron | 35.0% |
| !! | TGCAGAAGAAGTTTTGTAAG+AGG | + | chr4.3:26802800-26802819 | None:intergenic | 35.0% |
| !! | TGTTGATTTCAGAAGTCACT+TGG | - | chr4.3:26804402-26804421 | MS.gene053508:CDS | 35.0% |
| !!! | GCAAGAGCTTTTTCAGTTTT+TGG | + | chr4.3:26800858-26800877 | None:intergenic | 35.0% |
| !!! | GCTGCTTTTATTTCCAATTG+TGG | - | chr4.3:26800879-26800898 | MS.gene053508:intron | 35.0% |
| !!! | TCACCACCTTTTAGAATTTG+AGG | + | chr4.3:26804304-26804323 | None:intergenic | 35.0% |
| !!! | TGTTTTTGGCAGCCAAAATA+TGG | - | chr4.3:26799904-26799923 | MS.gene053508:intron | 35.0% |
| !!! | TTTTGGTTCTTGCTTCCATT+TGG | - | chr4.3:26802192-26802211 | MS.gene053508:intron | 35.0% |
| AAAGTCTATAGCTCACCATC+AGG | + | chr4.3:26799814-26799833 | None:intergenic | 40.0% | |
| ACAACAACAACAACCCAAGA+AGG | - | chr4.3:26799161-26799180 | MS.gene053508:CDS | 40.0% | |
| AGACTGTTAGGGAGATCTTA+TGG | + | chr4.3:26804036-26804055 | None:intergenic | 40.0% | |
| AGATGGAGTCCATTTACTTG+AGG | - | chr4.3:26803453-26803472 | MS.gene053508:CDS | 40.0% | |
| AGTTGTCATAGGAATCGTGA+TGG | - | chr4.3:26800972-26800991 | MS.gene053508:intron | 40.0% | |
| ATGGCATCTCTTGGTTTCTT+TGG | - | chr4.3:26803605-26803624 | MS.gene053508:intron | 40.0% | |
| CATTCTGTGAATGAGCTTTG+AGG | - | chr4.3:26802486-26802505 | MS.gene053508:intron | 40.0% | |
| CCATACAGGAACATGATTCA+GGG | + | chr4.3:26804269-26804288 | None:intergenic | 40.0% | |
| CTGAAACTGGTAAACCTTCT+TGG | + | chr4.3:26799178-26799197 | None:intergenic | 40.0% | |
| CTTTGTCATTGTCTACTAGG+AGG | - | chr4.3:26800739-26800758 | MS.gene053508:CDS | 40.0% | |
| GAAATTTCGAGCACCACAAT+TGG | + | chr4.3:26800895-26800914 | None:intergenic | 40.0% | |
| GAATGGAAGTCATGTTCAGT+GGG | - | chr4.3:26800063-26800082 | MS.gene053508:intron | 40.0% | |
| GCCCATGAAAAATATCCAAC+AGG | + | chr4.3:26800807-26800826 | None:intergenic | 40.0% | |
| TAGTTCCATGGAAATGTGTG+GGG | - | chr4.3:26800469-26800488 | MS.gene053508:intron | 40.0% | |
| TCAGCTCCAGAAACAAAAAC+AGG | + | chr4.3:26799485-26799504 | None:intergenic | 40.0% | |
| TCCATACAGGAACATGATTC+AGG | + | chr4.3:26804270-26804289 | None:intergenic | 40.0% | |
| TGATTAGCACTCGCAATGAA+AGG | + | chr4.3:26800594-26800613 | None:intergenic | 40.0% | |
| TGTAGCACTTGTGGTTATTG+CGG | - | chr4.3:26799250-26799269 | MS.gene053508:CDS | 40.0% | |
| TTATACCTTCCAGTTCAACG+GGG | - | chr4.3:26804378-26804397 | MS.gene053508:CDS | 40.0% | |
| TTCCTTCTCTCTACTCTTTG+TGG | + | chr4.3:26803339-26803358 | None:intergenic | 40.0% | |
| TTGTCATTGTCTACTAGGAG+GGG | - | chr4.3:26800741-26800760 | MS.gene053508:CDS | 40.0% | |
| TTTGAAAGAATTGGTGGGGT+TGG | - | chr4.3:26801641-26801660 | MS.gene053508:intron | 40.0% | |
| ! | AACATCTCGATCGACTCTTA+TGG | - | chr4.3:26800948-26800967 | MS.gene053508:intron | 40.0% |
| ! | AATTTGGGTTTAATGGGGAC+CGG | - | chr4.3:26800091-26800110 | MS.gene053508:intron | 40.0% |
| ! | GCCTTTATTTGTAGCACTTG+TGG | - | chr4.3:26799241-26799260 | MS.gene053508:CDS | 40.0% |
| ! | GGGTAATGCAGAAACTTTTG+TGG | - | chr4.3:26800489-26800508 | MS.gene053508:intron | 40.0% |
| ! | GGTGGAAAATTTTATAGCGG+GGG | - | chr4.3:26802725-26802744 | MS.gene053508:CDS | 40.0% |
| ! | GTGGTTGAAGGTGATGATTT+TGG | - | chr4.3:26799350-26799369 | MS.gene053508:CDS | 40.0% |
| ! | GTTTTCTGCTAGGTATCTCA+TGG | + | chr4.3:26802950-26802969 | None:intergenic | 40.0% |
| ! | TTTTGTTGCAGTGGACAAAC+TGG | - | chr4.3:26801946-26801965 | MS.gene053508:intron | 40.0% |
| !! | AGCAAGTGTTCTGAGATCAA+TGG | - | chr4.3:26800155-26800174 | MS.gene053508:CDS | 40.0% |
| !! | GAAAATTTTATAGCGGGGGT+TGG | - | chr4.3:26802729-26802748 | MS.gene053508:CDS | 40.0% |
| !! | GCAAATTTGTGTTTGGTGTC+TGG | - | chr4.3:26799601-26799620 | MS.gene053508:intron | 40.0% |
| !! | TGTTCTGAGATCAATGGAGT+CGG | - | chr4.3:26800161-26800180 | MS.gene053508:CDS | 40.0% |
| !!! | ACGGAACCTGTTTTTGTTTC+TGG | - | chr4.3:26799476-26799495 | MS.gene053508:intron | 40.0% |
| !!! | ATCACGCGTTTTTTATCTGC+AGG | - | chr4.3:26799837-26799856 | MS.gene053508:intron | 40.0% |
| !!! | GATTTTGGGTTAGAGACAGT+TGG | - | chr4.3:26799365-26799384 | MS.gene053508:CDS | 40.0% |
| !!! | GTTTTTGGGTAGGTTGGATA+TGG | - | chr4.3:26799280-26799299 | MS.gene053508:CDS | 40.0% |
| !!! | TTTTGTTTCTGGAGCTGAAC+AGG | - | chr4.3:26799487-26799506 | MS.gene053508:intron | 40.0% |
| AAAGTCAGGACTACTGATGC+AGG | + | chr4.3:26801502-26801521 | None:intergenic | 45.0% | |
| AAGGTCGCTTCTTGAAGTCT+GGG | + | chr4.3:26803370-26803389 | None:intergenic | 45.0% | |
| AATCAACATCCCCGTTGAAC+TGG | + | chr4.3:26804390-26804409 | None:intergenic | 45.0% | |
| AATCTATCCTGGAGAGCTTG+TGG | - | chr4.3:26803968-26803987 | MS.gene053508:intron | 45.0% | |
| AGAAACTTGTGAGGAGTGGT+TGG | - | chr4.3:26799415-26799434 | MS.gene053508:intron | 45.0% | |
| AGAGAGAAACTTGTGAGGAG+TGG | - | chr4.3:26799411-26799430 | MS.gene053508:intron | 45.0% | |
| AGCTAAATTTGTAGCGCGTC+AGG | + | chr4.3:26801976-26801995 | None:intergenic | 45.0% | |
| AGGGCCATCTGATTCTTTCA+AGG | - | chr4.3:26803259-26803278 | MS.gene053508:intron | 45.0% | |
| AGGGCCTTGAAAGAATCAGA+TGG | + | chr4.3:26803266-26803285 | None:intergenic | 45.0% | |
| ATACGAGAGGGATGCAGAAA+AGG | + | chr4.3:26803044-26803063 | None:intergenic | 45.0% | |
| ATACGGAGGAACAAAGTCAC+TGG | - | chr4.3:26801106-26801125 | MS.gene053508:intron | 45.0% | |
| CAACGGTTCCGAAGAAGAAA+TGG | - | chr4.3:26799207-26799226 | MS.gene053508:CDS | 45.0% | |
| CAGTAGTCCTGACTTTCTGT+TGG | - | chr4.3:26801506-26801525 | MS.gene053508:intron | 45.0% | |
| CATTACCCCACACATTTCCA+TGG | + | chr4.3:26800477-26800496 | None:intergenic | 45.0% | |
| CCCTGAATCATGTTCCTGTA+TGG | - | chr4.3:26804266-26804285 | MS.gene053508:CDS | 45.0% | |
| CGTAAGAACAGCAGTCTTGA+AGG | + | chr4.3:26804236-26804255 | None:intergenic | 45.0% | |
| CTGGGCATCTTGAGCTTATT+TGG | - | chr4.3:26803144-26803163 | MS.gene053508:intron | 45.0% | |
| CTGGGTTGTAGATCGTAACA+TGG | - | chr4.3:26801125-26801144 | MS.gene053508:intron | 45.0% | |
| CTTATTTCCACAAGCTCTCC+AGG | + | chr4.3:26803978-26803997 | None:intergenic | 45.0% | |
| GCTAAATTTGTAGCGCGTCA+GGG | + | chr4.3:26801975-26801994 | None:intergenic | 45.0% | |
| GGAATGGAAGTCATGTTCAG+TGG | - | chr4.3:26800062-26800081 | MS.gene053508:intron | 45.0% | |
| TACAGCTGCCATATCCACAA+GGG | + | chr4.3:26803285-26803304 | None:intergenic | 45.0% | |
| TACGGAGGAACAAAGTCACT+GGG | - | chr4.3:26801107-26801126 | MS.gene053508:intron | 45.0% | |
| TATGGCTAAGAACGCAGCTA+TGG | - | chr4.3:26799298-26799317 | MS.gene053508:CDS | 45.0% | |
| TGATTCTTTCAAGGCCCTTG+TGG | - | chr4.3:26803268-26803287 | MS.gene053508:intron | 45.0% | |
| TGCAGAGAACAATCTTGCCA+TGG | - | chr4.3:26800194-26800213 | MS.gene053508:CDS | 45.0% | |
| TGCTAGGTATCTCATGGACT+TGG | + | chr4.3:26802944-26802963 | None:intergenic | 45.0% | |
| TGTTGTAGGAACTATCCCTG+TGG | - | chr4.3:26802831-26802850 | MS.gene053508:CDS | 45.0% | |
| TTCTGCACCAACAGAAAGTC+AGG | + | chr4.3:26801516-26801535 | None:intergenic | 45.0% | |
| TTGTGGCCAAGTGAATGCAA+AGG | + | chr4.3:26803322-26803341 | None:intergenic | 45.0% | |
| TTTCAAGGCCCTTGTGGATA+TGG | - | chr4.3:26803274-26803293 | MS.gene053508:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.3:26800411-26800430 | None:intergenic | 45.0% |
| ! | AGAGCATCTCTTGGTTTCTC+TGG | - | chr4.3:26803763-26803782 | MS.gene053508:intron | 45.0% |
| ! | ATGCTTCAGGGTTTTCTGCT+AGG | + | chr4.3:26802960-26802979 | None:intergenic | 45.0% |
| ! | ATGGGCTGAGTATGACATCA+TGG | - | chr4.3:26800821-26800840 | MS.gene053508:intron | 45.0% |
| ! | ATTGCGGAGATCGCGTTTTT+GGG | - | chr4.3:26799266-26799285 | MS.gene053508:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.3:26800412-26800431 | None:intergenic | 45.0% |
| ! | CATAGGAATCGTGATGGAAG+AGG | - | chr4.3:26800978-26800997 | MS.gene053508:intron | 45.0% |
| ! | TATTGCGGAGATCGCGTTTT+TGG | - | chr4.3:26799265-26799284 | MS.gene053508:CDS | 45.0% |
| ! | TCAGACTTCAGAGCATCTCT+TGG | - | chr4.3:26803754-26803773 | MS.gene053508:intron | 45.0% |
| ! | TTTGGGTTAGAGACAGTTGG+TGG | - | chr4.3:26799368-26799387 | MS.gene053508:CDS | 45.0% |
| !! | TGGTTGCTGACTTGTTCTAC+CGG | - | chr4.3:26799318-26799337 | MS.gene053508:CDS | 45.0% |
| !! | TTTTTCCAGTCGCTTGTTGC+TGG | - | chr4.3:26802040-26802059 | MS.gene053508:intron | 45.0% |
| AACATCCCCGTTGAACTGGA+AGG | + | chr4.3:26804386-26804405 | None:intergenic | 50.0% | |
| ACAATCTTGCCATGGCACGA+CGG | - | chr4.3:26800202-26800221 | MS.gene053508:CDS | 50.0% | |
| ACTGATGCAGGAACCCAAGA+AGG | + | chr4.3:26801490-26801509 | None:intergenic | 50.0% | |
| AGGGACGTCAGATGATAGAC+TGG | + | chr4.3:26800787-26800806 | None:intergenic | 50.0% | |
| CAAATGCAGCCTCAGGTTTC+CGG | + | chr4.3:26800113-26800132 | None:intergenic | 50.0% | |
| CAAGGTCGCTTCTTGAAGTC+TGG | + | chr4.3:26803371-26803390 | None:intergenic | 50.0% | |
| CACTGGACCTAAAGCATGGT+AGG | - | chr4.3:26801215-26801234 | MS.gene053508:intron | 50.0% | |
| CAGAGTCAGATGACCCTGTT+TGG | - | chr4.3:26803682-26803701 | MS.gene053508:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.3:26800410-26800429 | MS.gene053508:intron | 50.0% | |
| CTATCATCTGACGTCCCTGT+TGG | - | chr4.3:26800789-26800808 | MS.gene053508:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.3:26800407-26800426 | None:intergenic | 50.0% | |
| GGAACTATCCCTGTGGTTGT+TGG | - | chr4.3:26802838-26802857 | MS.gene053508:intron | 50.0% | |
| GGCCACAAAGAGTAGAGAGA+AGG | - | chr4.3:26803334-26803353 | MS.gene053508:intron | 50.0% | |
| GGTCTTTCAGGCTTCCATAC+AGG | + | chr4.3:26804283-26804302 | None:intergenic | 50.0% | |
| GTACAGCTGCCATATCCACA+AGG | + | chr4.3:26803286-26803305 | None:intergenic | 50.0% | |
| GTGTGCTCCTACCATGCTTT+AGG | + | chr4.3:26801225-26801244 | None:intergenic | 50.0% | |
| TGCAGGAACCCAAGAAGGAA+AGG | + | chr4.3:26801485-26801504 | None:intergenic | 50.0% | |
| TGCTTTCTGATGAGTGCCAC+TGG | - | chr4.3:26801198-26801217 | MS.gene053508:intron | 50.0% | |
| TGGCCAAGTGAATGCAAAGG+CGG | + | chr4.3:26803319-26803338 | None:intergenic | 50.0% | |
| TTGCCGCCTTTGCATTCACT+TGG | - | chr4.3:26803313-26803332 | MS.gene053508:intron | 50.0% | |
| TTGGAGGACCAACAACCACA+GGG | + | chr4.3:26802849-26802868 | None:intergenic | 50.0% | |
| TTTGGAGGACCAACAACCAC+AGG | + | chr4.3:26802850-26802869 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.3:26800413-26800432 | None:intergenic | 50.0% |
| ! | CTACCATGCTTTAGGTCCAG+TGG | + | chr4.3:26801217-26801236 | None:intergenic | 50.0% |
| ! | CTCGCAATGAAAGGTACACC+TGG | + | chr4.3:26800585-26800604 | None:intergenic | 50.0% |
| ! | TTTGGCTTACCTCAGCAAGC+TGG | - | chr4.3:26800129-26800148 | MS.gene053508:intron | 50.0% |
| !!! | GATCGCGTTTTTGGGTAGGT+TGG | - | chr4.3:26799274-26799293 | MS.gene053508:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.3:26800399-26800418 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.3:26800398-26800417 | MS.gene053508:intron | 55.0% | |
| CCATACCAGCAACAAGCGAC+TGG | + | chr4.3:26802048-26802067 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.3:26800405-26800424 | MS.gene053508:intron | 55.0% | |
| CGGAAACCTGAGGCTGCATT+TGG | - | chr4.3:26800111-26800130 | MS.gene053508:intron | 55.0% | |
| CTTGTTCTACCGGTCACGTG+CGG | - | chr4.3:26799328-26799347 | MS.gene053508:CDS | 55.0% | |
| GACCTTGCAAGTGCACTCGA+GGG | - | chr4.3:26803384-26803403 | MS.gene053508:intron | 55.0% | |
| GGGCTTCGAGAGCTTGCAAT+CGG | + | chr4.3:26800917-26800936 | None:intergenic | 55.0% | |
| GGTAAGCCAAATGCAGCCTC+AGG | + | chr4.3:26800120-26800139 | None:intergenic | 55.0% | |
| TAATGGGGACCGGAAACCTG+AGG | - | chr4.3:26800101-26800120 | MS.gene053508:intron | 55.0% | |
| TGAGGAGTGGTTGGAGAGAG+AGG | - | chr4.3:26799424-26799443 | MS.gene053508:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.3:26800399-26800418 | MS.gene053508:intron | 55.0% | |
| ! | CCAGTCGCTTGTTGCTGGTA+TGG | - | chr4.3:26802045-26802064 | MS.gene053508:intron | 55.0% |
| ! | GTGCCACTGGACCTAAAGCA+TGG | - | chr4.3:26801211-26801230 | MS.gene053508:intron | 55.0% |
| !! | CTTGCTGTTCCAGCTTGCTG+AGG | + | chr4.3:26800141-26800160 | None:intergenic | 55.0% |
| !!! | CGGAGATCGCGTTTTTGGGT+AGG | - | chr4.3:26799270-26799289 | MS.gene053508:CDS | 55.0% |
| ATCTTGCCATGGCACGACGG+TGG | - | chr4.3:26800205-26800224 | MS.gene053508:CDS | 60.0% | |
| CGACCTTGCAAGTGCACTCG+AGG | - | chr4.3:26803383-26803402 | MS.gene053508:intron | 60.0% | |
| CTTCAACCACCGCACGTGAC+CGG | + | chr4.3:26799340-26799359 | None:intergenic | 60.0% | |
| GACCCTCGAGTGCACTTGCA+AGG | + | chr4.3:26803389-26803408 | None:intergenic | 60.0% | |
| TCTTGCCATGGCACGACGGT+GGG | - | chr4.3:26800206-26800225 | MS.gene053508:CDS | 60.0% | |
| ACCCTGCGGGCTTGACACAG+AGG | - | chr4.3:26804347-26804366 | MS.gene053508:CDS | 65.0% | |
| CGGTCACGTGCGGTGGTTGA+AGG | - | chr4.3:26799338-26799357 | MS.gene053508:CDS | 65.0% | |
| GCCTCTGTGTCAAGCCCGCA+GGG | + | chr4.3:26804351-26804370 | None:intergenic | 65.0% | |
| GCTTACCCACCGTCGTGCCA+TGG | + | chr4.3:26800214-26800233 | None:intergenic | 65.0% | |
| GTTCTACCGGTCACGTGCGG+TGG | - | chr4.3:26799331-26799350 | MS.gene053508:CDS | 65.0% | |
| TGCCTCTGTGTCAAGCCCGC+AGG | + | chr4.3:26804352-26804371 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 26799143 | 26804465 | 26799143 | ID=MS.gene053508 |
| chr4.3 | mRNA | 26799143 | 26804465 | 26799143 | ID=MS.gene053508.t1;Parent=MS.gene053508 |
| chr4.3 | exon | 26804124 | 26804465 | 26804124 | ID=MS.gene053508.t1.exon1;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26804124 | 26804465 | 26804124 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26803385 | 26803545 | 26803385 | ID=MS.gene053508.t1.exon2;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26803385 | 26803545 | 26803385 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26802609 | 26802850 | 26802609 | ID=MS.gene053508.t1.exon3;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26802609 | 26802850 | 26802609 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26801547 | 26801651 | 26801547 | ID=MS.gene053508.t1.exon4;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26801547 | 26801651 | 26801547 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26800613 | 26800769 | 26800613 | ID=MS.gene053508.t1.exon5;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26800613 | 26800769 | 26800613 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26800134 | 26800361 | 26800134 | ID=MS.gene053508.t1.exon6;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26800134 | 26800361 | 26800134 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| chr4.3 | exon | 26799143 | 26799398 | 26799143 | ID=MS.gene053508.t1.exon7;Parent=MS.gene053508.t1 |
| chr4.3 | CDS | 26799143 | 26799398 | 26799143 | ID=cds.MS.gene053508.t1;Parent=MS.gene053508.t1 |
| Gene Sequence |
| Protein sequence |
