Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054570.t1 | XP_020237768.1 | 80.6 | 299 | 53 | 2 | 1 | 294 | 1 | 299 | 3.80E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054570.t1 | Q8H1G0 | 61.6 | 292 | 108 | 3 | 1 | 289 | 1 | 291 | 9.3e-92 | 338.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054570.t1 | A0A151RPA5 | 80.6 | 299 | 53 | 2 | 1 | 294 | 1 | 299 | 2.8e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054570.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053154 | MS.gene054570 | 0.963887 | 1.22E-122 | -1.69E-46 |
| MS.gene05415 | MS.gene054570 | 0.817406 | 3.35E-52 | -1.69E-46 |
| MS.gene054570 | MS.gene065294 | -0.804884 | 1.74E-49 | -1.69E-46 |
| MS.gene054570 | MS.gene069956 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene054570 | MS.gene072819 | 0.810191 | 1.30E-50 | -1.69E-46 |
| MS.gene054570 | MS.gene34180 | 0.800138 | 1.66E-48 | -1.69E-46 |
| MS.gene054570 | MS.gene94929 | 0.803224 | 3.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054570.t1 | MTR_3g100050 | 57.534 | 219 | 71 | 5 | 54 | 262 | 35 | 241 | 3.38e-70 | 219 |
| MS.gene054570.t1 | MTR_5g066510 | 47.857 | 280 | 85 | 9 | 15 | 271 | 34 | 275 | 6.01e-67 | 211 |
| MS.gene054570.t1 | MTR_3g100040 | 54.696 | 181 | 77 | 1 | 83 | 263 | 69 | 244 | 3.56e-62 | 201 |
| MS.gene054570.t1 | MTR_4g093730 | 51.741 | 201 | 81 | 4 | 81 | 275 | 41 | 231 | 3.73e-59 | 192 |
| MS.gene054570.t1 | MTR_3g100040 | 53.793 | 145 | 62 | 1 | 119 | 263 | 1 | 140 | 7.71e-47 | 158 |
| MS.gene054570.t1 | MTR_4g008070 | 87.342 | 79 | 10 | 0 | 177 | 255 | 1 | 79 | 7.15e-46 | 150 |
| MS.gene054570.t1 | MTR_4g008090 | 89.873 | 79 | 7 | 1 | 102 | 179 | 12 | 90 | 7.46e-43 | 143 |
| MS.gene054570.t1 | MTR_5g066510 | 46.535 | 202 | 72 | 7 | 15 | 215 | 34 | 200 | 1.96e-38 | 134 |
| MS.gene054570.t1 | MTR_3g060200 | 40.000 | 95 | 51 | 2 | 169 | 263 | 4 | 92 | 1.29e-14 | 73.2 |
| MS.gene054570.t1 | MTR_3g060200 | 40.000 | 95 | 51 | 2 | 169 | 263 | 4 | 92 | 1.70e-14 | 73.9 |
| MS.gene054570.t1 | MTR_3g060200 | 40.000 | 95 | 51 | 2 | 169 | 263 | 4 | 92 | 1.72e-14 | 73.6 |
| MS.gene054570.t1 | MTR_3g060200 | 40.000 | 95 | 51 | 2 | 169 | 263 | 4 | 92 | 1.93e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054570.t1 | AT1G51600 | 61.149 | 296 | 111 | 3 | 1 | 293 | 1 | 295 | 7.34e-127 | 363 |
| MS.gene054570.t1 | AT1G51600 | 61.149 | 296 | 111 | 3 | 1 | 293 | 1 | 295 | 7.34e-127 | 363 |
| MS.gene054570.t1 | AT3G21175 | 61.379 | 290 | 105 | 3 | 1 | 288 | 1 | 285 | 6.60e-120 | 346 |
| MS.gene054570.t1 | AT3G21175 | 60.959 | 292 | 105 | 4 | 1 | 288 | 1 | 287 | 5.78e-118 | 341 |
| MS.gene054570.t1 | AT3G21175 | 58.182 | 220 | 88 | 1 | 1 | 220 | 1 | 216 | 5.62e-82 | 246 |
| MS.gene054570.t1 | AT4G24470 | 51.269 | 197 | 87 | 3 | 68 | 263 | 68 | 256 | 2.08e-61 | 197 |
| MS.gene054570.t1 | AT4G24470 | 51.269 | 197 | 87 | 3 | 68 | 263 | 68 | 256 | 2.08e-61 | 197 |
| MS.gene054570.t1 | AT4G24470 | 51.269 | 197 | 87 | 3 | 68 | 263 | 68 | 256 | 2.52e-61 | 197 |
Find 78 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCTCATTCTTGTTTAA+TGG | 0.137752 | 4.1:-87461311 | None:intergenic |
| TCAATCTGTACTACTGTTAT+TGG | 0.235229 | 4.1:+87456737 | MS.gene054570:CDS |
| TGGACTTATGTGGGCAAATA+AGG | 0.243603 | 4.1:+87457849 | MS.gene054570:CDS |
| TGGACTTGGCAGATGTAAAT+TGG | 0.265787 | 4.1:-87457496 | None:intergenic |
| CAGAGGGTTCTTGGCCCTTC+AGG | 0.272302 | 4.1:-87457817 | None:intergenic |
| CAAGCATTGCAGAGGGTTCT+TGG | 0.288221 | 4.1:-87457826 | None:intergenic |
| TCTCATTTCCATTGCTCATA+TGG | 0.307609 | 4.1:-87455874 | None:intergenic |
| TTTAGGATGCAAAGAAATAA+AGG | 0.321682 | 4.1:+87457473 | MS.gene054570:intron |
| TGACAGTCACACTTTAATAA+TGG | 0.327842 | 4.1:+87455985 | MS.gene054570:CDS |
| ATGGATCAAGGGAATGATAT+TGG | 0.357672 | 4.1:+87456004 | MS.gene054570:CDS |
| CAATCTGTACTACTGTTATT+GGG | 0.360369 | 4.1:+87456738 | MS.gene054570:CDS |
| TCAGGTCCACGCCGCATCAT+TGG | 0.388420 | 4.1:-87457799 | None:intergenic |
| CGACTCCGTGTCGCCAGAAA+AGG | 0.398718 | 4.1:+87456069 | MS.gene054570:CDS |
| TTTCTCCGGATGAAAATAAC+CGG | 0.414016 | 4.1:+87456799 | MS.gene054570:CDS |
| ATCAAGGACAGCAACCTTGC+CGG | 0.414254 | 4.1:+87461277 | MS.gene054570:CDS |
| ATCTCTAAGCACTGTCTGAT+TGG | 0.416220 | 4.1:-87461438 | None:intergenic |
| ACCTTCCATGCCAATTTCTC+CGG | 0.418936 | 4.1:+87456785 | MS.gene054570:CDS |
| CAGTACATGGATGGTATTCA+TGG | 0.423116 | 4.1:+87455779 | None:intergenic |
| TGAACCACAGGGAGCGCTTA+GGG | 0.440040 | 4.1:+87461250 | MS.gene054570:intron |
| TCAGCTGATGCAGACTCATC+AGG | 0.441839 | 4.1:-87457521 | None:intergenic |
| GCAAGGTTGCTGTCCTTGAT+AGG | 0.445283 | 4.1:-87461274 | None:intergenic |
| ATTGGCATGGAAGGTAAGGT+TGG | 0.459291 | 4.1:-87456777 | None:intergenic |
| CACACTTTAATAATGGATCA+AGG | 0.470319 | 4.1:+87455992 | MS.gene054570:CDS |
| TTGAACCACAGGGAGCGCTT+AGG | 0.472073 | 4.1:+87461249 | MS.gene054570:intron |
| TTCGTAAAGAAGTAGCATTA+AGG | 0.488066 | 4.1:+87457013 | MS.gene054570:CDS |
| TTACACGGTATCTTGCTGTT+GGG | 0.489725 | 4.1:-87457591 | None:intergenic |
| GCAATGCTTGTGGACTTATG+TGG | 0.493003 | 4.1:+87457839 | MS.gene054570:CDS |
| CGGAACAAGTGAAGGTTTGA+CGG | 0.497532 | 4.1:+87457553 | MS.gene054570:CDS |
| GAAGATTTCCATTGTTAGAG+TGG | 0.498104 | 4.1:-87455961 | None:intergenic |
| CTTACACGGTATCTTGCTGT+TGG | 0.501886 | 4.1:-87457592 | None:intergenic |
| GGTTTGACGGTAGACAATAA+TGG | 0.505445 | 4.1:+87457566 | MS.gene054570:CDS |
| AAGCACTGTCTGATTGGCCT+CGG | 0.507209 | 4.1:-87461432 | None:intergenic |
| TATAGGATGTTGTTCATCAC+TGG | 0.518790 | 4.1:-87455822 | None:intergenic |
| TGTTCATATGGCATATGTAT+AGG | 0.519920 | 4.1:-87455839 | None:intergenic |
| AGACTCATCAGGATTGGACT+TGG | 0.520027 | 4.1:-87457510 | None:intergenic |
| AGAAATTGGCATGGAAGGTA+AGG | 0.522598 | 4.1:-87456781 | None:intergenic |
| TTCTCCATTAAACAAGAATG+AGG | 0.532237 | 4.1:+87461307 | MS.gene054570:CDS |
| TGGCTCTTCCAGTACATGGA+TGG | 0.532259 | 4.1:+87455770 | None:intergenic |
| TGCAACCCGTGATGTTCATA+TGG | 0.534256 | 4.1:-87455851 | None:intergenic |
| ATGATGCGGCGTGGACCTGA+AGG | 0.535411 | 4.1:+87457802 | MS.gene054570:CDS |
| AGAACCCTCTGCAATGCTTG+TGG | 0.537519 | 4.1:+87457829 | MS.gene054570:CDS |
| TGATGCAGACTCATCAGGAT+TGG | 0.539391 | 4.1:-87457516 | None:intergenic |
| GGTGAAATCCACTCTAACAA+TGG | 0.539967 | 4.1:+87455953 | MS.gene054570:CDS |
| GTATTCATGGTGTTGATTCG+CGG | 0.540049 | 4.1:+87455792 | MS.gene054570:CDS |
| ATAAATTGCGGAACAAGTGA+AGG | 0.554129 | 4.1:+87457545 | MS.gene054570:CDS |
| TCCGGAGAAATTGGCATGGA+AGG | 0.555042 | 4.1:-87456786 | None:intergenic |
| GAGCGCTTAGGGACCTATCA+AGG | 0.562951 | 4.1:+87461261 | MS.gene054570:CDS |
| TGGAGAATTATGTGCCGGCA+AGG | 0.571633 | 4.1:-87461291 | None:intergenic |
| ATGGATGACGATCAAAATAA+CGG | 0.572622 | 4.1:+87455896 | MS.gene054570:CDS |
| GGCATGGAAGGTAAGGTTGG+AGG | 0.573711 | 4.1:-87456774 | None:intergenic |
| ACACTTTAATAATGGATCAA+GGG | 0.577449 | 4.1:+87455993 | MS.gene054570:CDS |
| CAATGCTTGTGGACTTATGT+GGG | 0.580586 | 4.1:+87457840 | MS.gene054570:CDS |
| TTTAATGGAGAATTATGTGC+CGG | 0.581798 | 4.1:-87461296 | None:intergenic |
| TAGATTTCGTGAAAAGCGGA+AGG | 0.584600 | 4.1:+87456957 | MS.gene054570:CDS |
| TCAACGAAGCTAATCTCTGA+GGG | 0.586744 | 4.1:-87456933 | None:intergenic |
| ATATGCCATATGAACATCAC+GGG | 0.590381 | 4.1:+87455846 | MS.gene054570:CDS |
| TAATGTAAAGGTCTGTCATG+AGG | 0.590668 | 4.1:-87461471 | None:intergenic |
| AATGTAAAGGTCTGTCATGA+GGG | 0.591336 | 4.1:-87461470 | None:intergenic |
| TGATGCGGCGTGGACCTGAA+GGG | 0.602634 | 4.1:+87457803 | MS.gene054570:CDS |
| TATGAGCAATGGAAATGAGA+TGG | 0.602965 | 4.1:+87455877 | MS.gene054570:CDS |
| GGGTTGCACCATATGAGCAA+TGG | 0.606328 | 4.1:+87455866 | MS.gene054570:CDS |
| TGATTAGATTTCGTGAAAAG+CGG | 0.606344 | 4.1:+87456953 | MS.gene054570:CDS |
| CTGTACTACTGTTATTGGGA+GGG | 0.609779 | 4.1:+87456742 | MS.gene054570:CDS |
| CATATGCCATATGAACATCA+CGG | 0.625092 | 4.1:+87455845 | MS.gene054570:CDS |
| AGAAGTGCACGCCAATGATG+CGG | 0.629029 | 4.1:+87457788 | MS.gene054570:CDS |
| TCTGTACTACTGTTATTGGG+AGG | 0.631795 | 4.1:+87456741 | MS.gene054570:CDS |
| AACGGTGATTCTAACTGCGG+AGG | 0.632002 | 4.1:+87455914 | MS.gene054570:CDS |
| TTCATCCGGAGAAATTGGCA+TGG | 0.636383 | 4.1:-87456790 | None:intergenic |
| CATGTCAGTTGTAGGCATTG+TGG | 0.641895 | 4.1:+87457757 | MS.gene054570:intron |
| GCATCAGCTGAAATAAATTG+CGG | 0.642078 | 4.1:+87457533 | MS.gene054570:CDS |
| TTCTCCGGATGAAAATAACC+GGG | 0.649206 | 4.1:+87456800 | MS.gene054570:CDS |
| ATCAACGAAGCTAATCTCTG+AGG | 0.651895 | 4.1:-87456934 | None:intergenic |
| TAAGTCCACAAGCATTGCAG+AGG | 0.655536 | 4.1:-87457834 | None:intergenic |
| TGCACGCCAATGATGCGGCG+TGG | 0.659677 | 4.1:+87457793 | MS.gene054570:CDS |
| GGAGGAAGTGAGACTGCGGA+AGG | 0.665011 | 4.1:+87455932 | MS.gene054570:CDS |
| AAGTCCACAAGCATTGCAGA+GGG | 0.674174 | 4.1:-87457833 | None:intergenic |
| AATAACGGTGATTCTAACTG+CGG | 0.691144 | 4.1:+87455911 | MS.gene054570:CDS |
| CTGCGGAGGAAGTGAGACTG+CGG | 0.700049 | 4.1:+87455928 | MS.gene054570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATTTATAATAATCTT+AGG | + | chr4.1:87456700-87456719 | MS.gene054570:intron | 10.0% |
| !! | AATTATAACTTAATGAAAAA+TGG | + | chr4.1:87459498-87459517 | MS.gene054570:intron | 10.0% |
| !! | ACAAAAAATCAAAATAAAAT+CGG | + | chr4.1:87460309-87460328 | MS.gene054570:intron | 10.0% |
| !!! | ATATTATTTTACAACTTAAA+AGG | - | chr4.1:87459057-87459076 | None:intergenic | 10.0% |
| !!! | TATTTTGAAATTCAAATTTT+CGG | - | chr4.1:87460816-87460835 | None:intergenic | 10.0% |
| !! | AGAAATTTAGATATACAAAA+CGG | - | chr4.1:87458489-87458508 | None:intergenic | 15.0% |
| !! | GTATTCTAATCTATATATTA+TGG | + | chr4.1:87457659-87457678 | MS.gene054570:intron | 15.0% |
| !! | TTACAACAAAATACATAATA+GGG | + | chr4.1:87458068-87458087 | MS.gene054570:intron | 15.0% |
| !!! | AACTTAAAAGGAATTTTTAA+AGG | - | chr4.1:87459045-87459064 | None:intergenic | 15.0% |
| !!! | ATATTGATTAATAATGAAGA+TGG | - | chr4.1:87458156-87458175 | None:intergenic | 15.0% |
| !!! | ATTTATAACTTGGAATTTTA+AGG | - | chr4.1:87458747-87458766 | None:intergenic | 15.0% |
| !!! | ATTTTCAGAAATAATGAAAA+CGG | + | chr4.1:87456251-87456270 | MS.gene054570:intron | 15.0% |
| !!! | CAAATAATAATTAGTGTTTT+AGG | - | chr4.1:87459238-87459257 | None:intergenic | 15.0% |
| !!! | TTCATTTTAAATTTCTAACA+AGG | + | chr4.1:87456161-87456180 | MS.gene054570:intron | 15.0% |
| !! | AAAAACACCATAACTTAATT+GGG | + | chr4.1:87458670-87458689 | MS.gene054570:intron | 20.0% |
| !! | AAACGAATAAATCAAAAAGA+AGG | - | chr4.1:87461214-87461233 | None:intergenic | 20.0% |
| !! | AAATCACATATTAAGACTAA+AGG | - | chr4.1:87458535-87458554 | None:intergenic | 20.0% |
| !! | AACACTTGATTATAAAATGA+AGG | - | chr4.1:87458825-87458844 | None:intergenic | 20.0% |
| !! | ACACTTGATTATAAAATGAA+GGG | - | chr4.1:87458824-87458843 | None:intergenic | 20.0% |
| !! | AGCACTATATAATTAATTAC+TGG | + | chr4.1:87459309-87459328 | MS.gene054570:intron | 20.0% |
| !! | ATAACAAATCAGAATATGAT+TGG | + | chr4.1:87459470-87459489 | MS.gene054570:intron | 20.0% |
| !! | ATATAGAAAAACAATGTTGT+CGG | - | chr4.1:87457420-87457439 | None:intergenic | 20.0% |
| !! | CATACTATCTATGATAAAAT+AGG | - | chr4.1:87456570-87456589 | None:intergenic | 20.0% |
| !! | GTAATAAGCTTTACAATTAA+GGG | + | chr4.1:87460932-87460951 | MS.gene054570:intron | 20.0% |
| !! | GTATATATAGGAAATAATTC+AGG | + | chr4.1:87460644-87460663 | MS.gene054570:intron | 20.0% |
| !! | GTTACAACAAAATACATAAT+AGG | + | chr4.1:87458067-87458086 | MS.gene054570:intron | 20.0% |
| !! | TAAGTTGTAAAATAATATCC+TGG | + | chr4.1:87459059-87459078 | MS.gene054570:intron | 20.0% |
| !! | TACAACAAAATACATAATAG+GGG | + | chr4.1:87458069-87458088 | MS.gene054570:intron | 20.0% |
| !! | TATATATATGCTTATGAACT+AGG | - | chr4.1:87456541-87456560 | None:intergenic | 20.0% |
| !! | TCATTTCAACTAATAATCAT+AGG | - | chr4.1:87457190-87457209 | None:intergenic | 20.0% |
| !!! | ATAATTTTGTATAGCAACAT+AGG | - | chr4.1:87460984-87461003 | None:intergenic | 20.0% |
| !!! | GTATTTTGTTGTAACATTTT+TGG | - | chr4.1:87458062-87458081 | None:intergenic | 20.0% |
| !!! | GTTGCATTGTTTTTTATTAA+TGG | - | chr4.1:87460288-87460307 | None:intergenic | 20.0% |
| !!! | TATTTATGTGTTTTTGTGAT+AGG | - | chr4.1:87460462-87460481 | None:intergenic | 20.0% |
| !!! | TCATTTTCGTTTAGAATTTT+CGG | - | chr4.1:87456321-87456340 | None:intergenic | 20.0% |
| !!! | TTGACTTTTTAAAACATTTC+TGG | + | chr4.1:87456278-87456297 | MS.gene054570:intron | 20.0% |
| !!! | TTGTTAAATCCATTTTATTG+AGG | - | chr4.1:87459779-87459798 | None:intergenic | 20.0% |
| !!! | TTTAGTCTTAATATGTGATT+TGG | + | chr4.1:87458534-87458553 | MS.gene054570:intron | 20.0% |
| ! | AAAATGAAAACAGGATACAT+GGG | + | chr4.1:87456393-87456412 | MS.gene054570:intron | 25.0% |
| ! | AAGGTTAATCATAACTAGAA+TGG | - | chr4.1:87458451-87458470 | None:intergenic | 25.0% |
| ! | AAGTTATAAATCCACAATAG+TGG | + | chr4.1:87458756-87458775 | MS.gene054570:intron | 25.0% |
| ! | AATTCTAAACGAAAATGATG+AGG | + | chr4.1:87456323-87456342 | MS.gene054570:intron | 25.0% |
| ! | ACAAAGCAGCTAAAAATATT+GGG | + | chr4.1:87459375-87459394 | MS.gene054570:intron | 25.0% |
| ! | ACAACAAAATACATAATAGG+GGG | + | chr4.1:87458070-87458089 | MS.gene054570:intron | 25.0% |
| ! | ACAATTGTGTTTAGAAATTC+GGG | + | chr4.1:87458570-87458589 | MS.gene054570:intron | 25.0% |
| ! | ACAGGAACATATAACTAAAA+TGG | + | chr4.1:87459834-87459853 | MS.gene054570:intron | 25.0% |
| ! | ACTATCTATGATAAAATAGG+AGG | - | chr4.1:87456567-87456586 | None:intergenic | 25.0% |
| ! | ACTATTGTGGATTTATAACT+TGG | - | chr4.1:87458757-87458776 | None:intergenic | 25.0% |
| ! | ACTCGCATTAATTATTTAGT+TGG | - | chr4.1:87459349-87459368 | None:intergenic | 25.0% |
| ! | AGGTTAATCATAACTAGAAT+GGG | - | chr4.1:87458450-87458469 | None:intergenic | 25.0% |
| ! | AGTTATATGCCTCAATAAAA+TGG | + | chr4.1:87459767-87459786 | MS.gene054570:intron | 25.0% |
| ! | AGTTCCAATAAAGCAAAAAA+CGG | + | chr4.1:87460767-87460786 | MS.gene054570:intron | 25.0% |
| ! | ATTCTAAACGAAAATGATGA+GGG | + | chr4.1:87456324-87456343 | MS.gene054570:intron | 25.0% |
| ! | CAAAAACACCATAACTTAAT+TGG | + | chr4.1:87458669-87458688 | MS.gene054570:intron | 25.0% |
| ! | CACAATTGTGTTTAGAAATT+CGG | + | chr4.1:87458569-87458588 | MS.gene054570:intron | 25.0% |
| ! | CGTAATAAGCTTTACAATTA+AGG | + | chr4.1:87460931-87460950 | MS.gene054570:intron | 25.0% |
| ! | CTAATACGAAAAACTTCTTT+AGG | + | chr4.1:87457456-87457475 | MS.gene054570:intron | 25.0% |
| ! | CTAGAAGATTATCATACATA+CGG | - | chr4.1:87457278-87457297 | None:intergenic | 25.0% |
| ! | CTATCTATGATAAAATAGGA+GGG | - | chr4.1:87456566-87456585 | None:intergenic | 25.0% |
| ! | GGTTGAAATTCTTCAAAATA+AGG | - | chr4.1:87457710-87457729 | None:intergenic | 25.0% |
| ! | GTTTGCATAAATATCATTGA+TGG | - | chr4.1:87458892-87458911 | None:intergenic | 25.0% |
| ! | TATGAACTTTCAGAAATTAC+AGG | + | chr4.1:87459816-87459835 | MS.gene054570:intron | 25.0% |
| ! | TCGACATATCAATGATAAAA+TGG | - | chr4.1:87461068-87461087 | None:intergenic | 25.0% |
| ! | TGTATTAAGACAGAAAATTG+TGG | + | chr4.1:87459275-87459294 | MS.gene054570:intron | 25.0% |
| ! | TTAAAGGAATTTAGCAAGTT+TGG | - | chr4.1:87459029-87459048 | None:intergenic | 25.0% |
| !! | ATAGATGTGTAGTTTTTATG+GGG | + | chr4.1:87460717-87460736 | MS.gene054570:intron | 25.0% |
| !! | ATTTTATTGAGGCATATAAC+TGG | - | chr4.1:87459768-87459787 | None:intergenic | 25.0% |
| !! | CATAAATATCATTGATGGAT+TGG | - | chr4.1:87458887-87458906 | None:intergenic | 25.0% |
| !! | GATAGATGTGTAGTTTTTAT+GGG | + | chr4.1:87460716-87460735 | MS.gene054570:intron | 25.0% |
| !! | TGATAGATGTGTAGTTTTTA+TGG | + | chr4.1:87460715-87460734 | MS.gene054570:intron | 25.0% |
| !! | TTTAGGATGCAAAGAAATAA+AGG | + | chr4.1:87457473-87457492 | MS.gene054570:intron | 25.0% |
| !! | TTTTCAGAATAATAATTCCG+AGG | + | chr4.1:87461415-87461434 | MS.gene054570:intron | 25.0% |
| !! | TTTTTCGTATTAGTTAGCAA+GGG | - | chr4.1:87457449-87457468 | None:intergenic | 25.0% |
| !!! | ACACTTTAATAATGGATCAA+GGG | + | chr4.1:87455993-87456012 | MS.gene054570:CDS | 25.0% |
| !!! | ATATATTATGGTTGACTTGA+TGG | + | chr4.1:87457671-87457690 | MS.gene054570:intron | 25.0% |
| !!! | ATTTTTTTAGGGTTAACACT+TGG | + | chr4.1:87460854-87460873 | MS.gene054570:intron | 25.0% |
| !!! | CTTAGGAAAGCATAATATTT+TGG | + | chr4.1:87457952-87457971 | MS.gene054570:intron | 25.0% |
| !!! | GAAAGCATAATATTTTGGAA+TGG | + | chr4.1:87457957-87457976 | MS.gene054570:intron | 25.0% |
| !!! | GCTGAAATATTTTGATACTT+AGG | + | chr4.1:87457935-87457954 | MS.gene054570:intron | 25.0% |
| !!! | GTGTTTTTGACATTATCTTT+TGG | - | chr4.1:87458658-87458677 | None:intergenic | 25.0% |
| !!! | TTTTCATTTTTTGAACCACA+GGG | + | chr4.1:87461239-87461258 | MS.gene054570:intron | 25.0% |
| AAAGAAGTAGCATTAAGGTA+TGG | + | chr4.1:87457018-87457037 | MS.gene054570:intron | 30.0% | |
| AAAGGAATTCAGATATCTGA+AGG | + | chr4.1:87458346-87458365 | MS.gene054570:intron | 30.0% | |
| AACGTTTCCAAATTTCTTGA+TGG | - | chr4.1:87459154-87459173 | None:intergenic | 30.0% | |
| AAGAAAGACTAATTCAGTGT+AGG | - | chr4.1:87457731-87457750 | None:intergenic | 30.0% | |
| AAGCTTACTGAATTTGATGT+TGG | - | chr4.1:87460358-87460377 | None:intergenic | 30.0% | |
| AATTAATGCAAGCAGATTAG+AGG | + | chr4.1:87460880-87460899 | MS.gene054570:intron | 30.0% | |
| ACTTAGTAGAACATCATTTG+TGG | - | chr4.1:87459592-87459611 | None:intergenic | 30.0% | |
| ATACAAAACGGTTTATGCAA+TGG | - | chr4.1:87458477-87458496 | None:intergenic | 30.0% | |
| ATATATGCTTATGAACTAGG+AGG | - | chr4.1:87456538-87456557 | None:intergenic | 30.0% | |
| ATCCATTGTTAATCCTGTTA+TGG | + | chr4.1:87456647-87456666 | MS.gene054570:intron | 30.0% | |
| ATGGATGACGATCAAAATAA+CGG | + | chr4.1:87455896-87455915 | MS.gene054570:CDS | 30.0% | |
| ATGTAGTGAATAACTGTGAT+AGG | + | chr4.1:87456197-87456216 | MS.gene054570:intron | 30.0% | |
| ATTAATGCAAGCAGATTAGA+GGG | + | chr4.1:87460881-87460900 | MS.gene054570:intron | 30.0% | |
| ATTCATGGTGATACAATTGA+TGG | - | chr4.1:87458606-87458625 | None:intergenic | 30.0% | |
| CAAAGCAGCTAAAAATATTG+GGG | + | chr4.1:87459376-87459395 | MS.gene054570:intron | 30.0% | |
| CAATCTGTACTACTGTTATT+GGG | + | chr4.1:87456738-87456757 | MS.gene054570:CDS | 30.0% | |
| CACATATTAAGACTAAAGGT+TGG | - | chr4.1:87458531-87458550 | None:intergenic | 30.0% | |
| CAGAAAACAAAATACCAGTA+AGG | + | chr4.1:87460526-87460545 | MS.gene054570:intron | 30.0% | |
| CAGGAAACATAGAGATTAAA+TGG | + | chr4.1:87457219-87457238 | MS.gene054570:intron | 30.0% | |
| CATTCAACTTGATTCAGATT+TGG | + | chr4.1:87461135-87461154 | MS.gene054570:intron | 30.0% | |
| CGAATTTCTAAACACAATTG+TGG | - | chr4.1:87458571-87458590 | None:intergenic | 30.0% | |
| GAAAATGAAAACAGGATACA+TGG | + | chr4.1:87456392-87456411 | MS.gene054570:intron | 30.0% | |
| GACAAAGCAGCTAAAAATAT+TGG | + | chr4.1:87459374-87459393 | MS.gene054570:intron | 30.0% | |
| GACTTATAATAAGTGATGAG+AGG | - | chr4.1:87458936-87458955 | None:intergenic | 30.0% | |
| GAGTCACAAAATGTATTGTT+TGG | + | chr4.1:87458017-87458036 | MS.gene054570:intron | 30.0% | |
| GTATTACTACATTACTTGGT+TGG | + | chr4.1:87456822-87456841 | MS.gene054570:intron | 30.0% | |
| GTTGAAATGAAACTGAAAAC+AGG | + | chr4.1:87457200-87457219 | MS.gene054570:intron | 30.0% | |
| GTTGAAGTGAAAATGAAAAC+AGG | + | chr4.1:87456384-87456403 | MS.gene054570:intron | 30.0% | |
| TAAAGAGTTACATCTAGAGA+AGG | - | chr4.1:87458186-87458205 | None:intergenic | 30.0% | |
| TAATGAAGATGGTCAAGATA+TGG | - | chr4.1:87458145-87458164 | None:intergenic | 30.0% | |
| TACTGAATTTGATGTTGGAA+AGG | - | chr4.1:87460353-87460372 | None:intergenic | 30.0% | |
| TAGCTTATATACGATTTCCA+TGG | - | chr4.1:87459686-87459705 | None:intergenic | 30.0% | |
| TAGTTAGAAGATAACTGATG+CGG | + | chr4.1:87460485-87460504 | MS.gene054570:intron | 30.0% | |
| TATATGCTTATGAACTAGGA+GGG | - | chr4.1:87456537-87456556 | None:intergenic | 30.0% | |
| TCAATCTGTACTACTGTTAT+TGG | + | chr4.1:87456737-87456756 | MS.gene054570:CDS | 30.0% | |
| TGACAGTCACACTTTAATAA+TGG | + | chr4.1:87455985-87456004 | MS.gene054570:CDS | 30.0% | |
| TGATAGGTTAACAATGAAAC+AGG | + | chr4.1:87460420-87460439 | MS.gene054570:intron | 30.0% | |
| TGATTAGATTTCGTGAAAAG+CGG | + | chr4.1:87456953-87456972 | MS.gene054570:CDS | 30.0% | |
| TGTCCGAAAAATAATCGAAA+AGG | + | chr4.1:87461011-87461030 | MS.gene054570:intron | 30.0% | |
| TGTTCATATGGCATATGTAT+AGG | - | chr4.1:87455842-87455861 | None:intergenic | 30.0% | |
| TTCCACGTTTAATTAAAGTC+AGG | - | chr4.1:87459436-87459455 | None:intergenic | 30.0% | |
| TTCGTAAAGAAGTAGCATTA+AGG | + | chr4.1:87457013-87457032 | MS.gene054570:CDS | 30.0% | |
| TTCTCCATTAAACAAGAATG+AGG | + | chr4.1:87461307-87461326 | MS.gene054570:CDS | 30.0% | |
| TTTAATGGAGAATTATGTGC+CGG | - | chr4.1:87461299-87461318 | None:intergenic | 30.0% | |
| TTTCAAAATAGCAAATGCTG+TGG | + | chr4.1:87460826-87460845 | MS.gene054570:intron | 30.0% | |
| ! | ACATCATTTGTGGAGTTTTA+AGG | - | chr4.1:87459582-87459601 | None:intergenic | 30.0% |
| ! | AGTTGTTGCTATGTACTTTT+TGG | - | chr4.1:87459658-87459677 | None:intergenic | 30.0% |
| ! | GACTAACTTTTCTTCTAACA+TGG | + | chr4.1:87456508-87456527 | MS.gene054570:intron | 30.0% |
| ! | GCTCATGAAACATTTTATCA+GGG | + | chr4.1:87456880-87456899 | MS.gene054570:intron | 30.0% |
| ! | GGTAATATATGGAAGTATGT+TGG | - | chr4.1:87458406-87458425 | None:intergenic | 30.0% |
| ! | GTTTTTCGTATTAGTTAGCA+AGG | - | chr4.1:87457450-87457469 | None:intergenic | 30.0% |
| ! | TCAACCTCATTCTTGTTTAA+TGG | - | chr4.1:87461314-87461333 | None:intergenic | 30.0% |
| ! | TGATGAATGTGGTAATGTTT+GGG | - | chr4.1:87460180-87460199 | None:intergenic | 30.0% |
| ! | TTATTTTCATCCGGAGAAAT+TGG | - | chr4.1:87456798-87456817 | None:intergenic | 30.0% |
| ! | TTGATGAATGTGGTAATGTT+TGG | - | chr4.1:87460181-87460200 | None:intergenic | 30.0% |
| !! | AAACAGGATTAGTTACCAAA+GGG | + | chr4.1:87460436-87460455 | MS.gene054570:intron | 30.0% |
| !! | AACTTGGAATTTTAAGGAAC+TGG | - | chr4.1:87458741-87458760 | None:intergenic | 30.0% |
| !! | CAAATCTGAATCAAGTTGAA+TGG | - | chr4.1:87461137-87461156 | None:intergenic | 30.0% |
| !! | CACACTTTAATAATGGATCA+AGG | + | chr4.1:87455992-87456011 | MS.gene054570:CDS | 30.0% |
| !! | CACTTAGATGGCTTTATAAA+TGG | + | chr4.1:87459200-87459219 | MS.gene054570:intron | 30.0% |
| !! | GCTTTTATCAGATTGATGAT+GGG | - | chr4.1:87460041-87460060 | None:intergenic | 30.0% |
| !! | GGACCTTTTCGATTATTTTT+CGG | - | chr4.1:87461017-87461036 | None:intergenic | 30.0% |
| !! | TATCATTGATGGATTGGAAA+TGG | - | chr4.1:87458881-87458900 | None:intergenic | 30.0% |
| !!! | ATAAGTTGATGAACCTTTTC+TGG | - | chr4.1:87456085-87456104 | None:intergenic | 30.0% |
| !!! | ATGTTTTGATGATGCAACAA+GGG | - | chr4.1:87459091-87459110 | None:intergenic | 30.0% |
| !!! | ATTTGGCTTTTATACTCGAA+TGG | + | chr4.1:87461152-87461171 | MS.gene054570:intron | 30.0% |
| !!! | GATGTTTGGTTTTTCTTTTC+TGG | + | chr4.1:87456440-87456459 | MS.gene054570:intron | 30.0% |
| !!! | GTTTTCATTTTTTGAACCAC+AGG | + | chr4.1:87461238-87461257 | MS.gene054570:intron | 30.0% |
| !!! | GTTTTTTGCTTTATTGGAAC+TGG | - | chr4.1:87460768-87460787 | None:intergenic | 30.0% |
| !!! | TATGTTTTGATGATGCAACA+AGG | - | chr4.1:87459092-87459111 | None:intergenic | 30.0% |
| !!! | TTGATGTTGGAAAGGTTTTT+TGG | - | chr4.1:87460345-87460364 | None:intergenic | 30.0% |
| AAAAACAATGTTGTCGGTCA+TGG | - | chr4.1:87457414-87457433 | None:intergenic | 35.0% | |
| AAAATAGCAAATGCTGTGGA+GGG | + | chr4.1:87460830-87460849 | MS.gene054570:intron | 35.0% | |
| AAATGAAGGGTTTCTTTGTG+AGG | - | chr4.1:87458811-87458830 | None:intergenic | 35.0% | |
| AATAACGGTGATTCTAACTG+CGG | + | chr4.1:87455911-87455930 | MS.gene054570:CDS | 35.0% | |
| AATGGGAAAATATGTGCTTG+AGG | - | chr4.1:87458433-87458452 | None:intergenic | 35.0% | |
| ACAAAATACCAGTAAGGTAG+TGG | + | chr4.1:87460532-87460551 | MS.gene054570:intron | 35.0% | |
| ACCAAACATCCTTAAAAGCA+AGG | - | chr4.1:87456430-87456449 | None:intergenic | 35.0% | |
| AGATGGCAGCATGTATATAT+AGG | + | chr4.1:87460632-87460651 | MS.gene054570:intron | 35.0% | |
| AGATTAGAGGGAAAATGCTA+GGG | + | chr4.1:87460893-87460912 | MS.gene054570:intron | 35.0% | |
| AGGAAATAATTCAGGCTTTG+TGG | + | chr4.1:87460652-87460671 | MS.gene054570:intron | 35.0% | |
| AGTTAGAAGATAACTGATGC+GGG | + | chr4.1:87460486-87460505 | MS.gene054570:intron | 35.0% | |
| ATAAATTGCGGAACAAGTGA+AGG | + | chr4.1:87457545-87457564 | MS.gene054570:CDS | 35.0% | |
| ATAGCAACAACTATACACCA+TGG | + | chr4.1:87459666-87459685 | MS.gene054570:intron | 35.0% | |
| ATATGCCATATGAACATCAC+GGG | + | chr4.1:87455846-87455865 | MS.gene054570:CDS | 35.0% | |
| ATCGTCACCCAATTAAGTTA+TGG | - | chr4.1:87458680-87458699 | None:intergenic | 35.0% | |
| ATGGATCAAGGGAATGATAT+TGG | + | chr4.1:87456004-87456023 | MS.gene054570:CDS | 35.0% | |
| ATGGCAAATGAGACAACTAA+AGG | + | chr4.1:87458301-87458320 | MS.gene054570:intron | 35.0% | |
| ATGGGAAAATATGTGCTTGA+GGG | - | chr4.1:87458432-87458451 | None:intergenic | 35.0% | |
| ATGTGGGCAAATAAGGTAAA+TGG | + | chr4.1:87457856-87457875 | MS.gene054570:intron | 35.0% | |
| CAAAATTGTGGTTGTCATGT+CGG | + | chr4.1:87460395-87460414 | MS.gene054570:intron | 35.0% | |
| CACTTGACAACTTAGAAAAG+TGG | + | chr4.1:87459001-87459020 | MS.gene054570:intron | 35.0% | |
| CATATGCCATATGAACATCA+CGG | + | chr4.1:87455845-87455864 | MS.gene054570:CDS | 35.0% | |
| CCAAGTAATGTAGTAATACC+CGG | - | chr4.1:87456821-87456840 | None:intergenic | 35.0% | |
| CCAATTACACGCAATATTCA+TGG | - | chr4.1:87458621-87458640 | None:intergenic | 35.0% | |
| CCATGAATATTGCGTGTAAT+TGG | + | chr4.1:87458618-87458637 | MS.gene054570:intron | 35.0% | |
| GAAAGTAAAGTTTCAGCGTT+AGG | + | chr4.1:87460558-87460577 | MS.gene054570:intron | 35.0% | |
| GAAGATCTAAGTTCCTATGT+TGG | - | chr4.1:87461377-87461396 | None:intergenic | 35.0% | |
| GAAGATTTCCATTGTTAGAG+TGG | - | chr4.1:87455964-87455983 | None:intergenic | 35.0% | |
| GAAGGTGATAGAAATAAACG+CGG | + | chr4.1:87458364-87458383 | MS.gene054570:intron | 35.0% | |
| GCATCAGCTGAAATAAATTG+CGG | + | chr4.1:87457533-87457552 | MS.gene054570:CDS | 35.0% | |
| GTCCATAACAGGATTAACAA+TGG | - | chr4.1:87456652-87456671 | None:intergenic | 35.0% | |
| GTCCTGACTTTAATTAAACG+TGG | + | chr4.1:87459431-87459450 | MS.gene054570:intron | 35.0% | |
| TAACTGTGATAGGAAGAAGA+TGG | + | chr4.1:87456207-87456226 | MS.gene054570:intron | 35.0% | |
| TAAGGCTATGTTGCAGTAAA+TGG | - | chr4.1:87458853-87458872 | None:intergenic | 35.0% | |
| TATAGGATGTTGTTCATCAC+TGG | - | chr4.1:87455825-87455844 | None:intergenic | 35.0% | |
| TATGAGCAATGGAAATGAGA+TGG | + | chr4.1:87455877-87455896 | MS.gene054570:CDS | 35.0% | |
| TCCAATAAAGCAAAAAACGG+CGG | + | chr4.1:87460770-87460789 | MS.gene054570:intron | 35.0% | |
| TCTCATTTCCATTGCTCATA+TGG | - | chr4.1:87455877-87455896 | None:intergenic | 35.0% | |
| TGGCAAATGAGACAACTAAA+GGG | + | chr4.1:87458302-87458321 | MS.gene054570:intron | 35.0% | |
| TTTCAACTCATGTCAGTTGT+AGG | + | chr4.1:87457749-87457768 | MS.gene054570:intron | 35.0% | |
| TTTCTCCGGATGAAAATAAC+CGG | + | chr4.1:87456799-87456818 | MS.gene054570:CDS | 35.0% | |
| ! | AAATAATTCAGGCTTTGTGG+AGG | + | chr4.1:87460655-87460674 | MS.gene054570:intron | 35.0% |
| ! | AATAATTCAGGCTTTGTGGA+GGG | + | chr4.1:87460656-87460675 | MS.gene054570:intron | 35.0% |
| ! | CAGCTTACTTTGTCTTTTCA+GGG | + | chr4.1:87456031-87456050 | MS.gene054570:CDS | 35.0% |
| ! | CTGTAAAATTTTGCAGCAAG+TGG | - | chr4.1:87459118-87459137 | None:intergenic | 35.0% |
| ! | GGCTCATGAAACATTTTATC+AGG | + | chr4.1:87456879-87456898 | MS.gene054570:intron | 35.0% |
| ! | GGCTTTTATCAGATTGATGA+TGG | - | chr4.1:87460042-87460061 | None:intergenic | 35.0% |
| ! | GTACTTTGTTGTCGATGAAT+TGG | + | chr4.1:87456468-87456487 | MS.gene054570:intron | 35.0% |
| ! | GTTTTTGCTGGTCAAATATC+TGG | + | chr4.1:87456858-87456877 | MS.gene054570:intron | 35.0% |
| ! | TCAGCTTACTTTGTCTTTTC+AGG | + | chr4.1:87456030-87456049 | MS.gene054570:CDS | 35.0% |
| !! | AATACCCGGTTATTTTCATC+CGG | - | chr4.1:87456807-87456826 | None:intergenic | 35.0% |
| !! | CACTTGCTGCAAAATTTTAC+AGG | + | chr4.1:87459116-87459135 | MS.gene054570:intron | 35.0% |
| !! | GAAACAGGATTAGTTACCAA+AGG | + | chr4.1:87460435-87460454 | MS.gene054570:intron | 35.0% |
| !! | GGATTGGAAATGGTTTGTTA+AGG | - | chr4.1:87458871-87458890 | None:intergenic | 35.0% |
| !! | GTACTTTTTGGTGAATGTTG+TGG | - | chr4.1:87459646-87459665 | None:intergenic | 35.0% |
| !! | GTTCGATTGATAGTTTTTGC+TGG | + | chr4.1:87456846-87456865 | MS.gene054570:intron | 35.0% |
| !! | TGTCGTCTTTGAAACTTGAA+AGG | + | chr4.1:87458328-87458347 | MS.gene054570:intron | 35.0% |
| !!! | CTGTGGAGGGAATTTTTTTA+GGG | + | chr4.1:87460843-87460862 | MS.gene054570:intron | 35.0% |
| AAAATATGTGCTTGAGGGTG+AGG | - | chr4.1:87458427-87458446 | None:intergenic | 40.0% | |
| AAGACTAAAGGTTGGAGTGA+CGG | - | chr4.1:87458523-87458542 | None:intergenic | 40.0% | |
| AAGATACCGTGTAAGTTCAC+TGG | + | chr4.1:87457600-87457619 | MS.gene054570:intron | 40.0% | |
| AAGGAACTGGATGTTTGTCT+TGG | - | chr4.1:87458728-87458747 | None:intergenic | 40.0% | |
| AATGAGCCAGTGAACTTACA+CGG | - | chr4.1:87457609-87457628 | None:intergenic | 40.0% | |
| ACAGGATACATGGGAAGTAA+TGG | + | chr4.1:87456402-87456421 | MS.gene054570:intron | 40.0% | |
| ACGGTTTATGCAATGGAACA+AGG | - | chr4.1:87458470-87458489 | None:intergenic | 40.0% | |
| AGAAATTGGCATGGAAGGTA+AGG | - | chr4.1:87456784-87456803 | None:intergenic | 40.0% | |
| AGTTGTCCATGCGAAAATAC+AGG | + | chr4.1:87458219-87458238 | MS.gene054570:intron | 40.0% | |
| ATCAACGAAGCTAATCTCTG+AGG | - | chr4.1:87456937-87456956 | None:intergenic | 40.0% | |
| ATGCGAAAATACAGGCGTTT+GGG | + | chr4.1:87458227-87458246 | MS.gene054570:intron | 40.0% | |
| ATTGCGTGTAATTGGCGAAT+AGG | + | chr4.1:87458626-87458645 | MS.gene054570:intron | 40.0% | |
| CAAAAAACGGCGGAAACTAA+TGG | + | chr4.1:87460780-87460799 | MS.gene054570:intron | 40.0% | |
| CAAAATAGCAAATGCTGTGG+AGG | + | chr4.1:87460829-87460848 | MS.gene054570:intron | 40.0% | |
| CAATGCTTGTGGACTTATGT+GGG | + | chr4.1:87457840-87457859 | MS.gene054570:CDS | 40.0% | |
| CAATTATAACACACGCCTCA+AGG | - | chr4.1:87456605-87456624 | None:intergenic | 40.0% | |
| CACATTCATCAACCAACTTC+AGG | + | chr4.1:87460189-87460208 | MS.gene054570:intron | 40.0% | |
| CAGATTAGAGGGAAAATGCT+AGG | + | chr4.1:87460892-87460911 | MS.gene054570:intron | 40.0% | |
| CCGGGTATTACTACATTACT+TGG | + | chr4.1:87456818-87456837 | MS.gene054570:intron | 40.0% | |
| CTAAAATCAAACCCTGTGCA+GGG | - | chr4.1:87456679-87456698 | None:intergenic | 40.0% | |
| CTGTACTACTGTTATTGGGA+GGG | + | chr4.1:87456742-87456761 | MS.gene054570:CDS | 40.0% | |
| CTTGAGGGTGAGGTAATATA+TGG | - | chr4.1:87458417-87458436 | None:intergenic | 40.0% | |
| CTTTCATTCCACTACCTTAC+TGG | - | chr4.1:87460543-87460562 | None:intergenic | 40.0% | |
| GAATGTTGTGGTGTCTAACT+TGG | - | chr4.1:87459634-87459653 | None:intergenic | 40.0% | |
| GATGTTTCTCTTGCCAACAT+AGG | + | chr4.1:87461361-87461380 | MS.gene054570:intron | 40.0% | |
| GCATCTCAACAGCAAAATTG+TGG | + | chr4.1:87460383-87460402 | MS.gene054570:intron | 40.0% | |
| GGGTTTATGAGAATTAGGGT+TGG | - | chr4.1:87460063-87460082 | None:intergenic | 40.0% | |
| GGTGAAATCCACTCTAACAA+TGG | + | chr4.1:87455953-87455972 | MS.gene054570:CDS | 40.0% | |
| GGTTTGACGGTAGACAATAA+TGG | + | chr4.1:87457566-87457585 | MS.gene054570:CDS | 40.0% | |
| GTGTAATTGGCGAATAGGTT+TGG | + | chr4.1:87458631-87458650 | MS.gene054570:intron | 40.0% | |
| TAAAGTTTCAGCGTTAGGTC+TGG | + | chr4.1:87460563-87460582 | MS.gene054570:intron | 40.0% | |
| TAGATTTCGTGAAAAGCGGA+AGG | + | chr4.1:87456957-87456976 | MS.gene054570:CDS | 40.0% | |
| TCAACGAAGCTAATCTCTGA+GGG | - | chr4.1:87456936-87456955 | None:intergenic | 40.0% | |
| TCATACGCAGAAGGAATCAA+TGG | + | chr4.1:87459736-87459755 | MS.gene054570:intron | 40.0% | |
| TCTGTACTACTGTTATTGGG+AGG | + | chr4.1:87456741-87456760 | MS.gene054570:CDS | 40.0% | |
| TGATCATTAACAAGAGCCAG+TGG | - | chr4.1:87458282-87458301 | None:intergenic | 40.0% | |
| TGGACTTATGTGGGCAAATA+AGG | + | chr4.1:87457849-87457868 | MS.gene054570:CDS | 40.0% | |
| TGGACTTGGCAGATGTAAAT+TGG | - | chr4.1:87457499-87457518 | None:intergenic | 40.0% | |
| TGGATCTGTTTACGACGAAT+TGG | - | chr4.1:87461117-87461136 | None:intergenic | 40.0% | |
| TGGCAATCACTGTAACATGT+TGG | - | chr4.1:87458262-87458281 | None:intergenic | 40.0% | |
| TTCTCCGGATGAAAATAACC+GGG | + | chr4.1:87456800-87456819 | MS.gene054570:CDS | 40.0% | |
| TTGTTGTGCACACTCTTTGA+TGG | - | chr4.1:87460589-87460608 | None:intergenic | 40.0% | |
| ! | AGGCACAGTTGTTTGTTGAA+AGG | - | chr4.1:87461194-87461213 | None:intergenic | 40.0% |
| ! | ATCTCTAAGCACTGTCTGAT+TGG | - | chr4.1:87461441-87461460 | None:intergenic | 40.0% |
| ! | CAAAGAGTGTGCACAACAAA+TGG | + | chr4.1:87460590-87460609 | MS.gene054570:intron | 40.0% |
| ! | CATTTTCAGCAGTTGTGCAA+CGG | - | chr4.1:87459409-87459428 | None:intergenic | 40.0% |
| ! | CTGGCTCTTGTTAATGATCA+TGG | + | chr4.1:87458282-87458301 | MS.gene054570:intron | 40.0% |
| ! | TCTAAAATCAAACCCTGTGC+AGG | - | chr4.1:87456680-87456699 | None:intergenic | 40.0% |
| ! | TGGCTCATTTTCGAACAAGA+GGG | + | chr4.1:87457620-87457639 | MS.gene054570:intron | 40.0% |
| !! | ATTGATGATGGGTTCAGTTG+TGG | - | chr4.1:87460030-87460049 | None:intergenic | 40.0% |
| !! | CTGAAGTTGGTTGATGAATG+TGG | - | chr4.1:87460191-87460210 | None:intergenic | 40.0% |
| !! | GCCTTGCTTTTAAGGATGTT+TGG | + | chr4.1:87456426-87456445 | MS.gene054570:intron | 40.0% |
| !! | GTAATGGAGCCTTGCTTTTA+AGG | + | chr4.1:87456418-87456437 | MS.gene054570:intron | 40.0% |
| !! | GTATTCATGGTGTTGATTCG+CGG | + | chr4.1:87455792-87455811 | MS.gene054570:CDS | 40.0% |
| !! | TAATCTTAGGTGTCGTTGCT+AGG | + | chr4.1:87456713-87456732 | MS.gene054570:intron | 40.0% |
| !! | TCCAAATTTCTTGATGGCGT+CGG | - | chr4.1:87459148-87459167 | None:intergenic | 40.0% |
| !! | TGGTACTGGTTGTGTGAAAA+TGG | - | chr4.1:87458708-87458727 | None:intergenic | 40.0% |
| !! | TGTTTTTGTGATAGGCCCTT+TGG | - | chr4.1:87460454-87460473 | None:intergenic | 40.0% |
| !! | TTACACGGTATCTTGCTGTT+GGG | - | chr4.1:87457594-87457613 | None:intergenic | 40.0% |
| !!! | GCTGTGGAGGGAATTTTTTT+AGG | + | chr4.1:87460842-87460861 | MS.gene054570:intron | 40.0% |
| !!! | TCCGCCGTTTTTTGCTTTAT+TGG | - | chr4.1:87460774-87460793 | None:intergenic | 40.0% |
| !!! | TGGGACTGTGTGTTGATTTT+TGG | - | chr4.1:87460161-87460180 | None:intergenic | 40.0% |
| AAACGCAGATCTTGCTGCAT+GGG | - | chr4.1:87460253-87460272 | None:intergenic | 45.0% | |
| AAACGGCGGAAACTAATGGA+AGG | + | chr4.1:87460784-87460803 | MS.gene054570:intron | 45.0% | |
| ACAGAACTCCATTGGAGTGT+CGG | - | chr4.1:87457248-87457267 | None:intergenic | 45.0% | |
| ACCGACGCCATCAAGAAATT+TGG | + | chr4.1:87459144-87459163 | MS.gene054570:intron | 45.0% | |
| ACCTTCCATGCCAATTTCTC+CGG | + | chr4.1:87456785-87456804 | MS.gene054570:CDS | 45.0% | |
| AGAAGATAACTGATGCGGGT+AGG | + | chr4.1:87460490-87460509 | MS.gene054570:intron | 45.0% | |
| AGACTCATCAGGATTGGACT+TGG | - | chr4.1:87457513-87457532 | None:intergenic | 45.0% | |
| ATCGAAAAGGTCCATGACTG+TGG | + | chr4.1:87461024-87461043 | MS.gene054570:intron | 45.0% | |
| ATGAGACAGCTGCACTTAGA+TGG | + | chr4.1:87459188-87459207 | MS.gene054570:intron | 45.0% | |
| ATGCAGTTTAACACGCCTTG+AGG | + | chr4.1:87456587-87456606 | MS.gene054570:intron | 45.0% | |
| ATTGGCATGGAAGGTAAGGT+TGG | - | chr4.1:87456780-87456799 | None:intergenic | 45.0% | |
| CATGCGAAAATACAGGCGTT+TGG | + | chr4.1:87458226-87458245 | MS.gene054570:intron | 45.0% | |
| CATGTTACAGTGATTGCCAC+TGG | + | chr4.1:87458263-87458282 | MS.gene054570:intron | 45.0% | |
| CCTATCCTGCAATGCTCATA+CGG | + | chr4.1:87460133-87460152 | MS.gene054570:intron | 45.0% | |
| CGCAATCATTCATACGCAGA+AGG | + | chr4.1:87459727-87459746 | MS.gene054570:intron | 45.0% | |
| CGGAACAAGTGAAGGTTTGA+CGG | + | chr4.1:87457553-87457572 | MS.gene054570:CDS | 45.0% | |
| CTGGATGTTTGTCTTGGTAC+TGG | - | chr4.1:87458722-87458741 | None:intergenic | 45.0% | |
| CTGGTTGTGTGAAAATGGAG+AGG | - | chr4.1:87458703-87458722 | None:intergenic | 45.0% | |
| GAAGATAACTGATGCGGGTA+GGG | + | chr4.1:87460491-87460510 | MS.gene054570:intron | 45.0% | |
| GCAATGCTTGTGGACTTATG+TGG | + | chr4.1:87457839-87457858 | MS.gene054570:CDS | 45.0% | |
| GGCAAGAACAATCCTGAAGT+TGG | - | chr4.1:87460204-87460223 | None:intergenic | 45.0% | |
| GGTTGTCATGTCGGAATGAT+AGG | + | chr4.1:87460404-87460423 | MS.gene054570:intron | 45.0% | |
| GTGTTACGACAGAACTCCAT+TGG | - | chr4.1:87457256-87457275 | None:intergenic | 45.0% | |
| TAAACCACAGTCCACAGTCA+TGG | - | chr4.1:87461038-87461057 | None:intergenic | 45.0% | |
| TAAACGCAGATCTTGCTGCA+TGG | - | chr4.1:87460254-87460273 | None:intergenic | 45.0% | |
| TAGCGTGAGCAATACTGAGA+TGG | + | chr4.1:87460615-87460634 | MS.gene054570:intron | 45.0% | |
| TCAGTGTAGAAGGTTTGTCG+AGG | - | chr4.1:87460110-87460129 | None:intergenic | 45.0% | |
| TGATGCAGACTCATCAGGAT+TGG | - | chr4.1:87457519-87457538 | None:intergenic | 45.0% | |
| TGCAACCCGTGATGTTCATA+TGG | - | chr4.1:87455854-87455873 | None:intergenic | 45.0% | |
| TGCAGGGAATAGTCCATAAC+AGG | - | chr4.1:87456663-87456682 | None:intergenic | 45.0% | |
| TTCATCCGGAGAAATTGGCA+TGG | - | chr4.1:87456793-87456812 | None:intergenic | 45.0% | |
| ! | AAGTCCACAAGCATTGCAGA+GGG | - | chr4.1:87457836-87457855 | None:intergenic | 45.0% |
| ! | AGAAGCTTGCTCCACTATTG+TGG | - | chr4.1:87458770-87458789 | None:intergenic | 45.0% |
| ! | CAAACGCCTGTATTTTCGCA+TGG | - | chr4.1:87458228-87458247 | None:intergenic | 45.0% |
| ! | CATGTCAGTTGTAGGCATTG+TGG | + | chr4.1:87457757-87457776 | MS.gene054570:intron | 45.0% |
| ! | CTGGCTCATTTTCGAACAAG+AGG | + | chr4.1:87457619-87457638 | MS.gene054570:intron | 45.0% |
| ! | CTTACACGGTATCTTGCTGT+TGG | - | chr4.1:87457595-87457614 | None:intergenic | 45.0% |
| ! | TAAGTCCACAAGCATTGCAG+AGG | - | chr4.1:87457837-87457856 | None:intergenic | 45.0% |
| ! | TATGAGCATTGCAGGATAGG+TGG | - | chr4.1:87460133-87460152 | None:intergenic | 45.0% |
| ! | TATGGACTATTCCCTGCACA+GGG | + | chr4.1:87456665-87456684 | MS.gene054570:intron | 45.0% |
| ! | TGAGGGACGCTGAATTTTTC+TGG | - | chr4.1:87456919-87456938 | None:intergenic | 45.0% |
| ! | TTATGGACTATTCCCTGCAC+AGG | + | chr4.1:87456664-87456683 | MS.gene054570:intron | 45.0% |
| !! | AGTGATGAGAGGCGTGTTTT+AGG | - | chr4.1:87458925-87458944 | None:intergenic | 45.0% |
| !! | ATGAACCTTTTCTGGCGACA+CGG | - | chr4.1:87456077-87456096 | None:intergenic | 45.0% |
| !! | GTGATGAGAGGCGTGTTTTA+GGG | - | chr4.1:87458924-87458943 | None:intergenic | 45.0% |
| !! | TGATGAGAGGCGTGTTTTAG+GGG | - | chr4.1:87458923-87458942 | None:intergenic | 45.0% |
| AACGGTGATTCTAACTGCGG+AGG | + | chr4.1:87455914-87455933 | MS.gene054570:CDS | 50.0% | |
| AGAACCCTCTGCAATGCTTG+TGG | + | chr4.1:87457829-87457848 | MS.gene054570:CDS | 50.0% | |
| ATCAAGGACAGCAACCTTGC+CGG | + | chr4.1:87461277-87461296 | MS.gene054570:CDS | 50.0% | |
| GAGTTTCGTCGAACAGGCTT+TGG | - | chr4.1:87460231-87460250 | None:intergenic | 50.0% | |
| GCAAGGTTGCTGTCCTTGAT+AGG | - | chr4.1:87461277-87461296 | None:intergenic | 50.0% | |
| GGATAGGTGGTCAGTGTAGA+AGG | - | chr4.1:87460120-87460139 | None:intergenic | 50.0% | |
| GGGTTGCACCATATGAGCAA+TGG | + | chr4.1:87455866-87455885 | MS.gene054570:CDS | 50.0% | |
| TCAGCTGATGCAGACTCATC+AGG | - | chr4.1:87457524-87457543 | None:intergenic | 50.0% | |
| TCCGGAGAAATTGGCATGGA+AGG | - | chr4.1:87456789-87456808 | None:intergenic | 50.0% | |
| TTCAGCAGTTGTGCAACGGT+TGG | - | chr4.1:87459405-87459424 | None:intergenic | 50.0% | |
| TTCAGCTCATAAGACCCGTG+CGG | - | chr4.1:87457921-87457940 | None:intergenic | 50.0% | |
| ! | AGAAGTGCACGCCAATGATG+CGG | + | chr4.1:87457788-87457807 | MS.gene054570:CDS | 50.0% |
| ! | CAAGCATTGCAGAGGGTTCT+TGG | - | chr4.1:87457829-87457848 | None:intergenic | 50.0% |
| ! | CAGAACTCCATTGGAGTGTC+GGG | - | chr4.1:87457247-87457266 | None:intergenic | 50.0% |
| ! | CCGTATGAGCATTGCAGGAT+AGG | - | chr4.1:87460136-87460155 | None:intergenic | 50.0% |
| ! | GATGGGTTCAGTTGTGGCAA+GGG | - | chr4.1:87460024-87460043 | None:intergenic | 50.0% |
| ! | GTGGAGGGTGCATATGCATA+GGG | + | chr4.1:87460671-87460690 | MS.gene054570:intron | 50.0% |
| ! | TGATGATGCAACAAGGGAGC+TGG | - | chr4.1:87459085-87459104 | None:intergenic | 50.0% |
| ! | TGGAACCGTATGAGCATTGC+AGG | - | chr4.1:87460141-87460160 | None:intergenic | 50.0% |
| ! | TGGAGAATTATGTGCCGGCA+AGG | - | chr4.1:87461294-87461313 | None:intergenic | 50.0% |
| ! | TGTGGAGGGTGCATATGCAT+AGG | + | chr4.1:87460670-87460689 | MS.gene054570:intron | 50.0% |
| !! | AAGCACTGTCTGATTGGCCT+CGG | - | chr4.1:87461435-87461454 | None:intergenic | 50.0% |
| !! | AGAACTCCATTGGAGTGTCG+GGG | - | chr4.1:87457246-87457265 | None:intergenic | 50.0% |
| !! | CGTCGAACAGGCTTTGGATA+GGG | - | chr4.1:87460225-87460244 | None:intergenic | 50.0% |
| !! | TCGTCGAACAGGCTTTGGAT+AGG | - | chr4.1:87460226-87460245 | None:intergenic | 50.0% |
| !! | TGATGGGTTCAGTTGTGGCA+AGG | - | chr4.1:87460025-87460044 | None:intergenic | 50.0% |
| !!! | GCGTGTTTTAGGGGTAGTGT+AGG | - | chr4.1:87458914-87458933 | None:intergenic | 50.0% |
| AATGGACCCCGACACTCCAA+TGG | + | chr4.1:87457237-87457256 | MS.gene054570:intron | 55.0% | |
| CAATGTTGTCGGTCATGGCG+TGG | - | chr4.1:87457409-87457428 | None:intergenic | 55.0% | |
| GAGCGCTTAGGGACCTATCA+AGG | + | chr4.1:87461261-87461280 | MS.gene054570:CDS | 55.0% | |
| GCATGGGAGTTTCGTCGAAC+AGG | - | chr4.1:87460237-87460256 | None:intergenic | 55.0% | |
| GGCATGGAAGGTAAGGTTGG+AGG | - | chr4.1:87456777-87456796 | None:intergenic | 55.0% | |
| GTCGGTCATGGCGTGGATTT+AGG | - | chr4.1:87457402-87457421 | None:intergenic | 55.0% | |
| ! | AGGTCCATGACTGTGGACTG+TGG | + | chr4.1:87461031-87461050 | MS.gene054570:intron | 55.0% |
| !! | TGAACCACAGGGAGCGCTTA+GGG | + | chr4.1:87461250-87461269 | MS.gene054570:intron | 55.0% |
| !! | TTGAACCACAGGGAGCGCTT+AGG | + | chr4.1:87461249-87461268 | MS.gene054570:intron | 55.0% |
| ATGATGCGGCGTGGACCTGA+AGG | + | chr4.1:87457802-87457821 | MS.gene054570:CDS | 60.0% | |
| ATGCAACAAGGGAGCTGGCC+AGG | - | chr4.1:87459080-87459099 | None:intergenic | 60.0% | |
| CAGAGGGTTCTTGGCCCTTC+AGG | - | chr4.1:87457820-87457839 | None:intergenic | 60.0% | |
| CGACTCCGTGTCGCCAGAAA+AGG | + | chr4.1:87456069-87456088 | MS.gene054570:CDS | 60.0% | |
| CTGCGGAGGAAGTGAGACTG+CGG | + | chr4.1:87455928-87455947 | MS.gene054570:CDS | 60.0% | |
| GAGGCGCGCAATCTCTGTGA+TGG | - | chr4.1:87460091-87460110 | None:intergenic | 60.0% | |
| GGAGGAAGTGAGACTGCGGA+AGG | + | chr4.1:87455932-87455951 | MS.gene054570:CDS | 60.0% | |
| TCAGGTCCACGCCGCATCAT+TGG | - | chr4.1:87457802-87457821 | None:intergenic | 60.0% | |
| TGATGCGGCGTGGACCTGAA+GGG | + | chr4.1:87457803-87457822 | MS.gene054570:CDS | 60.0% | |
| AGGTCCCTAAGCGCTCCCTG+TGG | - | chr4.1:87461257-87461276 | None:intergenic | 65.0% | |
| ATAAGACCCGTGCGGCGCAC+GGG | - | chr4.1:87457913-87457932 | None:intergenic | 65.0% | |
| CACGGGTCGGCGATCTAGTG+AGG | - | chr4.1:87457896-87457915 | None:intergenic | 65.0% | |
| CATAAGACCCGTGCGGCGCA+CGG | - | chr4.1:87457914-87457933 | None:intergenic | 65.0% | |
| TGCACGCCAATGATGCGGCG+TGG | + | chr4.1:87457793-87457812 | MS.gene054570:CDS | 65.0% | |
| ! | GACCCGTGCGGCGCACGGGT+CGG | - | chr4.1:87457909-87457928 | None:intergenic | 80.0% |
| ! | TCGCCGACCCGTGCGCCGCA+CGG | + | chr4.1:87457903-87457922 | MS.gene054570:intron | 80.0% |
| ! | CGCCGACCCGTGCGCCGCAC+GGG | + | chr4.1:87457904-87457923 | MS.gene054570:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 87455785 | 87461478 | 87455785 | ID=MS.gene054570 |
| chr4.1 | mRNA | 87455785 | 87461478 | 87455785 | ID=MS.gene054570.t1;Parent=MS.gene054570 |
| chr4.1 | exon | 87455785 | 87456090 | 87455785 | ID=MS.gene054570.t1.exon1;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87455785 | 87456090 | 87455785 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87456735 | 87456821 | 87456735 | ID=MS.gene054570.t1.exon2;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87456735 | 87456821 | 87456735 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87456901 | 87457034 | 87456901 | ID=MS.gene054570.t1.exon3;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87456901 | 87457034 | 87456901 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87457478 | 87457609 | 87457478 | ID=MS.gene054570.t1.exon4;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87457478 | 87457609 | 87457478 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87457765 | 87457870 | 87457765 | ID=MS.gene054570.t1.exon5;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87457765 | 87457870 | 87457765 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87461260 | 87461328 | 87461260 | ID=MS.gene054570.t1.exon6;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87461260 | 87461328 | 87461260 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| chr4.1 | exon | 87461422 | 87461478 | 87461422 | ID=MS.gene054570.t1.exon7;Parent=MS.gene054570.t1 |
| chr4.1 | CDS | 87461422 | 87461478 | 87461422 | ID=cds.MS.gene054570.t1;Parent=MS.gene054570.t1 |
| Gene Sequence |
| Protein sequence |
