Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055420.t1 | XP_013443870.1 | 100 | 149 | 0 | 0 | 1 | 149 | 1 | 149 | 8.20E-80 | 306.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055420.t1 | P47922 | 93.3 | 149 | 10 | 0 | 1 | 149 | 1 | 149 | 3.9e-78 | 292.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055420.t1 | A0A072TWL0 | 100.0 | 149 | 0 | 0 | 1 | 149 | 1 | 149 | 5.9e-80 | 306.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055420 | MS.gene74137 | 0.807438 | 5.06E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89149 | MS.gene055420 | PPI |
| MS.gene051090 | MS.gene055420 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055420.t1 | MTR_8g007235 | 100.000 | 149 | 0 | 0 | 1 | 149 | 1 | 149 | 3.91e-108 | 304 |
| MS.gene055420.t1 | MTR_4g104030 | 64.865 | 148 | 51 | 1 | 3 | 149 | 83 | 230 | 1.50e-66 | 202 |
| MS.gene055420.t1 | MTR_8g099450 | 59.184 | 147 | 59 | 1 | 3 | 148 | 85 | 231 | 3.65e-62 | 191 |
| MS.gene055420.t1 | MTR_8g021233 | 32.292 | 96 | 65 | 0 | 3 | 98 | 72 | 167 | 2.44e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055420.t1 | AT4G09320 | 83.673 | 147 | 24 | 0 | 3 | 149 | 2 | 148 | 1.74e-91 | 262 |
| MS.gene055420.t1 | AT5G63310 | 63.514 | 148 | 53 | 1 | 3 | 149 | 84 | 231 | 9.19e-67 | 202 |
| MS.gene055420.t1 | AT4G11010 | 59.184 | 147 | 59 | 1 | 3 | 148 | 89 | 235 | 2.76e-62 | 191 |
| MS.gene055420.t1 | AT4G23900 | 59.864 | 147 | 58 | 1 | 3 | 148 | 88 | 234 | 3.19e-62 | 191 |
| MS.gene055420.t1 | AT4G23895 | 59.864 | 147 | 58 | 1 | 3 | 148 | 318 | 464 | 5.58e-60 | 192 |
| MS.gene055420.t1 | AT1G17410 | 35.556 | 135 | 84 | 1 | 3 | 134 | 33 | 167 | 1.42e-22 | 88.6 |
| MS.gene055420.t1 | AT1G17410 | 35.385 | 130 | 81 | 1 | 8 | 134 | 1 | 130 | 2.26e-21 | 84.3 |
| MS.gene055420.t1 | AT1G17410 | 34.066 | 91 | 60 | 0 | 8 | 98 | 1 | 91 | 3.85e-12 | 60.1 |
Find 45 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCGCCAACAAGGAAAT+TGG | 0.280936 | 8.1:+86435737 | MS.gene055420:CDS |
| CCCTGTTGTTGCCATGATTT+GGG | 0.284074 | 8.1:+86435117 | MS.gene055420:CDS |
| GCCCTGTTGTTGCCATGATT+TGG | 0.311298 | 8.1:+86435116 | MS.gene055420:CDS |
| CCACAAACCAATTTCCTTGT+TGG | 0.361994 | 8.1:-86435744 | None:intergenic |
| TATCAGCAGGTTTGAGAAGA+AGG | 0.368456 | 8.1:+86434287 | MS.gene055420:CDS |
| TCCCAAATCATGGCAACAAC+AGG | 0.371495 | 8.1:-86435118 | None:intergenic |
| GGTGACTTTGCTGTTGAGAT+TGG | 0.374163 | 8.1:+86435220 | MS.gene055420:CDS |
| TGCCATGCAGCAGGTCCCTC+AGG | 0.393989 | 8.1:-86435770 | None:intergenic |
| AGGCTGCTTTGCCATGCAGC+AGG | 0.417205 | 8.1:-86435779 | None:intergenic |
| ATTCTTTCCTTCCCAAATCA+TGG | 0.433603 | 8.1:-86435128 | None:intergenic |
| GCCTTTCTTCAGCGGATTGG+TGG | 0.441557 | 8.1:+86435078 | MS.gene055420:CDS |
| ACAACTGGCAGAAAGATTAT+TGG | 0.443417 | 8.1:+86435157 | MS.gene055420:CDS |
| CTCGGATTGAGCAGGGTTTG+TGG | 0.447088 | 8.1:-86435182 | None:intergenic |
| CCAACAAGGAAATTGGTTTG+TGG | 0.455431 | 8.1:+86435744 | MS.gene055420:CDS |
| AAGTCACCACGAATAGTTCC+AGG | 0.456893 | 8.1:-86435205 | None:intergenic |
| GTGACTTTGCTGTTGAGATT+GGG | 0.461283 | 8.1:+86435221 | MS.gene055420:CDS |
| GGAAAGAATGTTGTGACAAC+TGG | 0.461299 | 8.1:+86435142 | MS.gene055420:CDS |
| GTTCCAGGCTCGGATTGAGC+AGG | 0.463625 | 8.1:-86435190 | None:intergenic |
| AACCCTGCTCAATCCGAGCC+TGG | 0.477287 | 8.1:+86435187 | MS.gene055420:CDS |
| AAAGCCTTTCTTCAGCGGAT+TGG | 0.477724 | 8.1:+86435075 | MS.gene055420:CDS |
| TCCGAGCCTGGAACTATTCG+TGG | 0.486706 | 8.1:+86435199 | MS.gene055420:CDS |
| TCCACCAATCCGCTGAAGAA+AGG | 0.496234 | 8.1:-86435079 | None:intergenic |
| AGTCCTCTTTGAACACCATC+AGG | 0.504010 | 8.1:-86433632 | None:intergenic |
| TTGGTGGAATACATTGTCTC+TGG | 0.506765 | 8.1:+86435094 | MS.gene055420:CDS |
| AAGAAGGGTTTCTACTTGAA+AGG | 0.507643 | 8.1:+86434303 | MS.gene055420:CDS |
| TCCCTGAGGGACCTGCTGCA+TGG | 0.514590 | 8.1:+86435768 | MS.gene055420:CDS |
| AGGTTTGAAATTCTTGAATG+TGG | 0.522184 | 8.1:+86435012 | MS.gene055420:intron |
| TCTGCAAAGCCTTTCTTCAG+CGG | 0.530736 | 8.1:+86435070 | MS.gene055420:CDS |
| ATCAGCAGGTTTGAGAAGAA+GGG | 0.548918 | 8.1:+86434288 | MS.gene055420:CDS |
| ATTGGTTTGTGGTTCCCTGA+GGG | 0.548939 | 8.1:+86435755 | MS.gene055420:CDS |
| ACCACGAATAGTTCCAGGCT+CGG | 0.560343 | 8.1:-86435200 | None:intergenic |
| TGATGCAGGAACGTTATTCA+CGG | 0.563039 | 8.1:+86435701 | MS.gene055420:intron |
| GGCAAAGCAGCCTCCACTCG+TGG | 0.563561 | 8.1:+86435789 | MS.gene055420:CDS |
| TTCCAGGCTCGGATTGAGCA+GGG | 0.575170 | 8.1:-86435189 | None:intergenic |
| GCCATGCAGCAGGTCCCTCA+GGG | 0.586568 | 8.1:-86435769 | None:intergenic |
| AGGTTGGTGAGATTATCAGC+AGG | 0.589081 | 8.1:+86434274 | MS.gene055420:intron |
| TTCTGTTGAAAGCGCCAACA+AGG | 0.589117 | 8.1:+86435730 | MS.gene055420:CDS |
| TTCATCATGATCAAGCCTGA+TGG | 0.593169 | 8.1:+86433617 | MS.gene055420:CDS |
| ACTTTGCTGTTGAGATTGGG+AGG | 0.598896 | 8.1:+86435224 | MS.gene055420:CDS |
| AAGCCTGATGGTGTTCAAAG+AGG | 0.613792 | 8.1:+86433629 | MS.gene055420:CDS |
| ACTCGTAAATCCACGAGTGG+AGG | 0.617859 | 8.1:-86435799 | None:intergenic |
| GTTGTTGCCATGATTTGGGA+AGG | 0.625191 | 8.1:+86435121 | MS.gene055420:CDS |
| CCCAAATCATGGCAACAACA+GGG | 0.626477 | 8.1:-86435117 | None:intergenic |
| AATTGGTTTGTGGTTCCCTG+AGG | 0.646541 | 8.1:+86435754 | MS.gene055420:CDS |
| TTTACTCGTAAATCCACGAG+TGG | 0.672996 | 8.1:-86435802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAAATATTTGAAGT+GGG | + | chr8.1:86434053-86434072 | MS.gene055420:intron | 10.0% |
| !!! | TTTTAAAAAAATATTTGAAG+TGG | + | chr8.1:86434052-86434071 | MS.gene055420:intron | 10.0% |
| !!! | TTTTTTTATATATTTCATGT+TGG | + | chr8.1:86433987-86434006 | MS.gene055420:intron | 10.0% |
| !!! | AAAAAAAACGAAATTTTGAT+AGG | - | chr8.1:86433804-86433823 | None:intergenic | 15.0% |
| !!! | AATTTTGTAGATATTTGATA+TGG | + | chr8.1:86434594-86434613 | MS.gene055420:intron | 15.0% |
| !!! | ATTCTGGATTTTAAAATATT+TGG | + | chr8.1:86434917-86434936 | MS.gene055420:intron | 15.0% |
| !! | CTTAATAAATCATCCTTATT+TGG | + | chr8.1:86433751-86433770 | MS.gene055420:intron | 20.0% |
| !! | TAAAATCAAGTATTAAGAAC+AGG | - | chr8.1:86435294-86435313 | None:intergenic | 20.0% |
| !! | TTTAGCTAAATTTATTTGTG+TGG | + | chr8.1:86434176-86434195 | MS.gene055420:intron | 20.0% |
| !!! | TATTTTGAAATTCAAACTTG+AGG | + | chr8.1:86434820-86434839 | MS.gene055420:intron | 20.0% |
| !!! | TGAATCAATTTTTTTAGCTA+AGG | + | chr8.1:86433891-86433910 | MS.gene055420:intron | 20.0% |
| !!! | TGATACTTTTAAAACTTTTC+AGG | + | chr8.1:86434891-86434910 | MS.gene055420:intron | 20.0% |
| !!! | TTTGTTTTGAACAAATATCA+AGG | - | chr8.1:86435336-86435355 | None:intergenic | 20.0% |
| !!! | TTTTAATTTACTATTGATGC+AGG | + | chr8.1:86435687-86435706 | MS.gene055420:intron | 20.0% |
| ! | AAAAATGCCATTGTTTGATT+TGG | + | chr8.1:86435551-86435570 | MS.gene055420:intron | 25.0% |
| ! | AAATAGATGATGTTTGATGT+TGG | - | chr8.1:86435505-86435524 | None:intergenic | 25.0% |
| ! | AACTAAAAGTTAGTATGCTA+TGG | - | chr8.1:86434333-86434352 | None:intergenic | 25.0% |
| ! | AATAGATGATGTTTGATGTT+GGG | - | chr8.1:86435504-86435523 | None:intergenic | 25.0% |
| ! | ACTAAAAGTTAGTATGCTAT+GGG | - | chr8.1:86434332-86434351 | None:intergenic | 25.0% |
| ! | ATACTTGACTGTTTAGAAAA+TGG | + | chr8.1:86434113-86434132 | MS.gene055420:intron | 25.0% |
| ! | CAGCTAATAATAACCAAATA+AGG | - | chr8.1:86433767-86433786 | None:intergenic | 25.0% |
| ! | GAATTGTGAATCAAAAAAAG+AGG | - | chr8.1:86433679-86433698 | None:intergenic | 25.0% |
| ! | GTTGTTATGAGTTTGTAAAT+TGG | + | chr8.1:86433925-86433944 | MS.gene055420:intron | 25.0% |
| ! | GTTTGAATTTCAAAATAACC+AGG | - | chr8.1:86434817-86434836 | None:intergenic | 25.0% |
| ! | TACTTGACTGTTTAGAAAAT+GGG | + | chr8.1:86434114-86434133 | MS.gene055420:intron | 25.0% |
| ! | TCATGCTATGAATTAGTAAA+AGG | - | chr8.1:86434540-86434559 | None:intergenic | 25.0% |
| ! | TGTTTGACTGTTTAGAAATT+GGG | + | chr8.1:86433847-86433866 | MS.gene055420:intron | 25.0% |
| ! | TTGTTTGACTGTTTAGAAAT+TGG | + | chr8.1:86433846-86433865 | MS.gene055420:intron | 25.0% |
| !! | TTACATAGTCTTACTATTGT+AGG | + | chr8.1:86435260-86435279 | MS.gene055420:intron | 25.0% |
| !!! | GAAAAATTTGTTTTTCAGGT+TGG | + | chr8.1:86434258-86434277 | MS.gene055420:intron | 25.0% |
| !!! | GACTGAAAAATTTGTTTTTC+AGG | + | chr8.1:86434254-86434273 | MS.gene055420:intron | 25.0% |
| !!! | GAGATTACTTGTTGATTTTT+AGG | + | chr8.1:86434011-86434030 | MS.gene055420:intron | 25.0% |
| !!! | GATTTTGAAATTATTCGTGA+TGG | + | chr8.1:86434964-86434983 | MS.gene055420:intron | 25.0% |
| !!! | GTTGTTTTGAATTTGTAGAT+TGG | + | chr8.1:86434198-86434217 | MS.gene055420:intron | 25.0% |
| AAGTATCATTGTTAGACATG+AGG | - | chr8.1:86435388-86435407 | None:intergenic | 30.0% | |
| CAAACATGAAATCGTTGATA+TGG | + | chr8.1:86434497-86434516 | MS.gene055420:intron | 30.0% | |
| CTAACAATCACTCACTTATT+CGG | - | chr8.1:86434735-86434754 | None:intergenic | 30.0% | |
| TACACTTCAAAACCAACATT+TGG | - | chr8.1:86434855-86434874 | None:intergenic | 30.0% | |
| TATGCAAGATTCCAAAGTTT+GGG | + | chr8.1:86434695-86434714 | MS.gene055420:intron | 30.0% | |
| TCAATAAGCACCTATTAGTA+AGG | - | chr8.1:86435455-86435474 | None:intergenic | 30.0% | |
| TTATGCAAGATTCCAAAGTT+TGG | + | chr8.1:86434694-86434713 | MS.gene055420:intron | 30.0% | |
| TTCAAAACCAACATTTGGAA+AGG | - | chr8.1:86434850-86434869 | None:intergenic | 30.0% | |
| ! | AAAGTTTGGTAATTTCTCAC+TGG | + | chr8.1:86433963-86433982 | MS.gene055420:intron | 30.0% |
| ! | AGGTTTGAAATTCTTGAATG+TGG | + | chr8.1:86435012-86435031 | MS.gene055420:intron | 30.0% |
| ! | CTTGATTTTACTATTCCTCA+TGG | + | chr8.1:86435304-86435323 | MS.gene055420:intron | 30.0% |
| ! | TAGAGTTTATTTGCTGAACT+TGG | + | chr8.1:86435639-86435658 | MS.gene055420:intron | 30.0% |
| ! | TTGATTGACTCAAACATCAA+AGG | - | chr8.1:86435363-86435382 | None:intergenic | 30.0% |
| !! | AAATTGGGTTGTTGATAGTT+TGG | + | chr8.1:86433862-86433881 | MS.gene055420:intron | 30.0% |
| !! | AGAGCACTTTTGATTAGTTA+AGG | - | chr8.1:86435620-86435639 | None:intergenic | 30.0% |
| !! | ATAAAACTTAGAAAAGTGCC+TGG | + | chr8.1:86435426-86435445 | MS.gene055420:intron | 30.0% |
| !! | CTTTGGAATCTTGCATAAAA+TGG | - | chr8.1:86434692-86434711 | None:intergenic | 30.0% |
| !! | GAGCACTTTTGATTAGTTAA+GGG | - | chr8.1:86435619-86435638 | None:intergenic | 30.0% |
| !! | TAGAAAATGGGTTGATTTGT+TGG | + | chr8.1:86434126-86434145 | MS.gene055420:intron | 30.0% |
| !! | TTTTAGCTAAGGCTATTTGT+GGG | + | chr8.1:86433902-86433921 | MS.gene055420:intron | 30.0% |
| !!! | AAAACTTTTCAGGTCAATTC+TGG | + | chr8.1:86434901-86434920 | MS.gene055420:intron | 30.0% |
| !!! | TTTTTAGCTAAGGCTATTTG+TGG | + | chr8.1:86433901-86433920 | MS.gene055420:intron | 30.0% |
| AAAACAACAGGATTCAGACT+TGG | - | chr8.1:86434367-86434386 | None:intergenic | 35.0% | |
| AAGAAGGGTTTCTACTTGAA+AGG | + | chr8.1:86434303-86434322 | MS.gene055420:CDS | 35.0% | |
| ACAACTGGCAGAAAGATTAT+TGG | + | chr8.1:86435157-86435176 | MS.gene055420:CDS | 35.0% | |
| ACGTACTAACATATCAACTG+AGG | - | chr8.1:86434781-86434800 | None:intergenic | 35.0% | |
| ATTCTTTCCTTCCCAAATCA+TGG | - | chr8.1:86435131-86435150 | None:intergenic | 35.0% | |
| CGAGTTTCCAAATCAAACAA+TGG | - | chr8.1:86435561-86435580 | None:intergenic | 35.0% | |
| CTTGTTTGATGCTGAAAGTT+TGG | + | chr8.1:86434223-86434242 | MS.gene055420:intron | 35.0% | |
| GCTTGTTTGATCTGAAAGTT+TGG | + | chr8.1:86433949-86433968 | MS.gene055420:intron | 35.0% | |
| TACGTCACTAATTCATAACC+TGG | + | chr8.1:86434796-86434815 | MS.gene055420:intron | 35.0% | |
| TGATCAGAGAACAAAACAAC+AGG | - | chr8.1:86434379-86434398 | None:intergenic | 35.0% | |
| TTTAGCTAAGGCTATTTGTG+GGG | + | chr8.1:86433903-86433922 | MS.gene055420:intron | 35.0% | |
| ! | AAAAAAAGAGGTGTGAGAGA+AGG | - | chr8.1:86433667-86433686 | None:intergenic | 35.0% |
| ! | AAAAAAGAGGTGTGAGAGAA+GGG | - | chr8.1:86433666-86433685 | None:intergenic | 35.0% |
| !!! | CTGAACTTGGTTTTAAGTTG+CGG | + | chr8.1:86435652-86435671 | MS.gene055420:intron | 35.0% |
| AGGTCTTCCTTTCCAAATGT+TGG | + | chr8.1:86434840-86434859 | MS.gene055420:intron | 40.0% | |
| ATATCAAGGTGACTTCCATG+AGG | - | chr8.1:86435322-86435341 | None:intergenic | 40.0% | |
| ATCAGCAGGTTTGAGAAGAA+GGG | + | chr8.1:86434288-86434307 | MS.gene055420:CDS | 40.0% | |
| ATTAGTTAAGGGACAGAGCT+TGG | - | chr8.1:86435608-86435627 | None:intergenic | 40.0% | |
| CCACAAACCAATTTCCTTGT+TGG | - | chr8.1:86435747-86435766 | None:intergenic | 40.0% | |
| GGAAAGAATGTTGTGACAAC+TGG | + | chr8.1:86435142-86435161 | MS.gene055420:CDS | 40.0% | |
| TATCAGCAGGTTTGAGAAGA+AGG | + | chr8.1:86434287-86434306 | MS.gene055420:CDS | 40.0% | |
| TGATGCAGGAACGTTATTCA+CGG | + | chr8.1:86435701-86435720 | MS.gene055420:intron | 40.0% | |
| TGGTGAATGATTCTTGTGAC+TGG | + | chr8.1:86434984-86435003 | MS.gene055420:intron | 40.0% | |
| TTCATCATGATCAAGCCTGA+TGG | + | chr8.1:86433617-86433636 | MS.gene055420:CDS | 40.0% | |
| TTGGTGGAATACATTGTCTC+TGG | + | chr8.1:86435094-86435113 | MS.gene055420:CDS | 40.0% | |
| !! | CCAACAAGGAAATTGGTTTG+TGG | + | chr8.1:86435744-86435763 | MS.gene055420:CDS | 40.0% |
| !! | GTGACTTTGCTGTTGAGATT+GGG | + | chr8.1:86435221-86435240 | MS.gene055420:CDS | 40.0% |
| !! | TGGGTTGTTGATAGTTTGGT+TGG | + | chr8.1:86433866-86433885 | MS.gene055420:intron | 40.0% |
| AAAGCCTTTCTTCAGCGGAT+TGG | + | chr8.1:86435075-86435094 | MS.gene055420:CDS | 45.0% | |
| AACCCTCCCACTCGTTTATT+GGG | + | chr8.1:86434648-86434667 | MS.gene055420:intron | 45.0% | |
| AACTCGTGGATCCCAAACTT+TGG | - | chr8.1:86434709-86434728 | None:intergenic | 45.0% | |
| AAGTCACCACGAATAGTTCC+AGG | - | chr8.1:86435208-86435227 | None:intergenic | 45.0% | |
| AGTCCTCTTTGAACACCATC+AGG | - | chr8.1:86433635-86433654 | None:intergenic | 45.0% | |
| CACCTATTAGTAAGGATGCC+AGG | - | chr8.1:86435447-86435466 | None:intergenic | 45.0% | |
| CCCAAATCATGGCAACAACA+GGG | - | chr8.1:86435120-86435139 | None:intergenic | 45.0% | |
| CCCTGTTGTTGCCATGATTT+GGG | + | chr8.1:86435117-86435136 | MS.gene055420:CDS | 45.0% | |
| GATTCTTGTGACTGGACTTC+AGG | + | chr8.1:86434992-86435011 | MS.gene055420:intron | 45.0% | |
| GCTTCACCCAATAAACGAGT+GGG | - | chr8.1:86434657-86434676 | None:intergenic | 45.0% | |
| TAACCCTCCCACTCGTTTAT+TGG | + | chr8.1:86434647-86434666 | MS.gene055420:intron | 45.0% | |
| TCCCAAATCATGGCAACAAC+AGG | - | chr8.1:86435121-86435140 | None:intergenic | 45.0% | |
| TCTGCAAAGCCTTTCTTCAG+CGG | + | chr8.1:86435070-86435089 | MS.gene055420:CDS | 45.0% | |
| TGCCTGGCATCCTTACTAAT+AGG | + | chr8.1:86435442-86435461 | MS.gene055420:intron | 45.0% | |
| TGCTTCACCCAATAAACGAG+TGG | - | chr8.1:86434658-86434677 | None:intergenic | 45.0% | |
| ! | AAGCCTGATGGTGTTCAAAG+AGG | + | chr8.1:86433629-86433648 | MS.gene055420:CDS | 45.0% |
| ! | CACTTATTCGGTGAAACTCG+TGG | - | chr8.1:86434723-86434742 | None:intergenic | 45.0% |
| ! | GTTGTTGCCATGATTTGGGA+AGG | + | chr8.1:86435121-86435140 | MS.gene055420:CDS | 45.0% |
| !! | AATTGGTTTGTGGTTCCCTG+AGG | + | chr8.1:86435754-86435773 | MS.gene055420:CDS | 45.0% |
| !! | ACTTTGCTGTTGAGATTGGG+AGG | + | chr8.1:86435224-86435243 | MS.gene055420:CDS | 45.0% |
| !! | AGGTTGGTGAGATTATCAGC+AGG | + | chr8.1:86434274-86434293 | MS.gene055420:intron | 45.0% |
| !! | ATTGGTTTGTGGTTCCCTGA+GGG | + | chr8.1:86435755-86435774 | MS.gene055420:CDS | 45.0% |
| !! | GAAAGCGCCAACAAGGAAAT+TGG | + | chr8.1:86435737-86435756 | MS.gene055420:CDS | 45.0% |
| !! | GGTGACTTTGCTGTTGAGAT+TGG | + | chr8.1:86435220-86435239 | MS.gene055420:CDS | 45.0% |
| !! | TTCTGTTGAAAGCGCCAACA+AGG | + | chr8.1:86435730-86435749 | MS.gene055420:CDS | 45.0% |
| !!! | CTTGGTTTTAAGTTGCGGAG+TGG | + | chr8.1:86435657-86435676 | MS.gene055420:intron | 45.0% |
| AAACGAGTGGGAGGGTTAGA+TGG | - | chr8.1:86434645-86434664 | None:intergenic | 50.0% | |
| ACCACGAATAGTTCCAGGCT+CGG | - | chr8.1:86435203-86435222 | None:intergenic | 50.0% | |
| ACTCGTAAATCCACGAGTGG+AGG | - | chr8.1:86435802-86435821 | None:intergenic | 50.0% | |
| CACCCAATAAACGAGTGGGA+GGG | - | chr8.1:86434653-86434672 | None:intergenic | 50.0% | |
| GCCCTGTTGTTGCCATGATT+TGG | + | chr8.1:86435116-86435135 | MS.gene055420:CDS | 50.0% | |
| TCACCCAATAAACGAGTGGG+AGG | - | chr8.1:86434654-86434673 | None:intergenic | 50.0% | |
| TCCACCAATCCGCTGAAGAA+AGG | - | chr8.1:86435082-86435101 | None:intergenic | 50.0% | |
| CTCGGATTGAGCAGGGTTTG+TGG | - | chr8.1:86435185-86435204 | None:intergenic | 55.0% | |
| GGGAGGGTTAGATGGAGTGT+TGG | - | chr8.1:86434637-86434656 | None:intergenic | 55.0% | |
| TCCGAGCCTGGAACTATTCG+TGG | + | chr8.1:86435199-86435218 | MS.gene055420:CDS | 55.0% | |
| TTCCAGGCTCGGATTGAGCA+GGG | - | chr8.1:86435192-86435211 | None:intergenic | 55.0% | |
| !! | GCCTTTCTTCAGCGGATTGG+TGG | + | chr8.1:86435078-86435097 | MS.gene055420:CDS | 55.0% |
| AACCCTGCTCAATCCGAGCC+TGG | + | chr8.1:86435187-86435206 | MS.gene055420:CDS | 60.0% | |
| GTTCCAGGCTCGGATTGAGC+AGG | - | chr8.1:86435193-86435212 | None:intergenic | 60.0% | |
| ! | AGGCTGCTTTGCCATGCAGC+AGG | - | chr8.1:86435782-86435801 | None:intergenic | 60.0% |
| GCCATGCAGCAGGTCCCTCA+GGG | - | chr8.1:86435772-86435791 | None:intergenic | 65.0% | |
| GGCAAAGCAGCCTCCACTCG+TGG | + | chr8.1:86435789-86435808 | MS.gene055420:CDS | 65.0% | |
| TCCCTGAGGGACCTGCTGCA+TGG | + | chr8.1:86435768-86435787 | MS.gene055420:CDS | 65.0% | |
| TGCCATGCAGCAGGTCCCTC+AGG | - | chr8.1:86435773-86435792 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 86433602 | 86435823 | 86433602 | ID=MS.gene055420 |
| chr8.1 | mRNA | 86433602 | 86435823 | 86433602 | ID=MS.gene055420.t1;Parent=MS.gene055420 |
| chr8.1 | exon | 86433602 | 86433655 | 86433602 | ID=MS.gene055420.t1.exon1;Parent=MS.gene055420.t1 |
| chr8.1 | CDS | 86433602 | 86433655 | 86433602 | ID=cds.MS.gene055420.t1;Parent=MS.gene055420.t1 |
| chr8.1 | exon | 86434276 | 86434324 | 86434276 | ID=MS.gene055420.t1.exon2;Parent=MS.gene055420.t1 |
| chr8.1 | CDS | 86434276 | 86434324 | 86434276 | ID=cds.MS.gene055420.t1;Parent=MS.gene055420.t1 |
| chr8.1 | exon | 86435014 | 86435245 | 86435014 | ID=MS.gene055420.t1.exon3;Parent=MS.gene055420.t1 |
| chr8.1 | CDS | 86435014 | 86435245 | 86435014 | ID=cds.MS.gene055420.t1;Parent=MS.gene055420.t1 |
| chr8.1 | exon | 86435709 | 86435823 | 86435709 | ID=MS.gene055420.t1.exon4;Parent=MS.gene055420.t1 |
| chr8.1 | CDS | 86435709 | 86435823 | 86435709 | ID=cds.MS.gene055420.t1;Parent=MS.gene055420.t1 |
| Gene Sequence |
| Protein sequence |