Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95624.t1 | KEH23194.1 | 98.6 | 414 | 6 | 0 | 1 | 414 | 8 | 421 | 2.70E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95624.t1 | Q8LED3 | 67.5 | 382 | 123 | 1 | 34 | 414 | 53 | 434 | 2.7e-161 | 569.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95624.t1 | A0A072U088 | 98.6 | 414 | 6 | 0 | 1 | 414 | 8 | 421 | 1.9e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene95624 | 0.819175 | 1.33E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene95624 | 0.804475 | 2.12E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene95624 | 0.833718 | 4.54E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene95624 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene050376 | MS.gene95624 | 0.802724 | 4.90E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene95624 | 0.829599 | 4.70E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene95624 | 0.804776 | 1.84E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene95624 | 0.823697 | 1.20E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene95624 | 0.809254 | 2.07E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene95624 | 0.819138 | 1.36E-52 | -1.69E-46 |
| MS.gene052459 | MS.gene95624 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene95624 | 0.822216 | 2.67E-53 | -1.69E-46 |
| MS.gene052561 | MS.gene95624 | 0.824327 | 8.57E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene95624 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene95624 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene95624 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene95624 | 0.846767 | 1.77E-59 | -1.69E-46 |
| MS.gene053164 | MS.gene95624 | 0.836022 | 1.19E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene95624 | 0.845296 | 4.44E-59 | -1.69E-46 |
| MS.gene05458 | MS.gene95624 | 0.814823 | 1.27E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene95624 | 0.813753 | 2.18E-51 | -1.69E-46 |
| MS.gene054805 | MS.gene95624 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene055144 | MS.gene95624 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene95624 | 0.823537 | 1.31E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene95624 | 0.842784 | 2.09E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene95624 | 0.832162 | 1.11E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene95624 | 0.821416 | 4.08E-53 | -1.69E-46 |
| MS.gene05549 | MS.gene95624 | 0.810524 | 1.10E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene95624 | -0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene95624 | 0.819997 | 8.66E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene95624 | 0.80945 | 1.88E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene95624 | 0.802256 | 6.11E-49 | -1.69E-46 |
| MS.gene058206 | MS.gene95624 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene95624 | 0.832356 | 9.91E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene95624 | 0.801332 | 9.47E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene95624 | 0.801886 | 7.29E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene95624 | 0.801277 | 9.71E-49 | -1.69E-46 |
| MS.gene060652 | MS.gene95624 | 0.810026 | 1.41E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95624.t1 | MTR_7g068920 | 98.551 | 414 | 6 | 0 | 1 | 414 | 8 | 421 | 0.0 | 847 |
| MS.gene95624.t1 | MTR_4g016940 | 79.750 | 400 | 81 | 0 | 15 | 414 | 28 | 427 | 0.0 | 692 |
| MS.gene95624.t1 | MTR_8g463790 | 45.278 | 413 | 206 | 5 | 3 | 414 | 16 | 409 | 3.07e-129 | 379 |
| MS.gene95624.t1 | MTR_5g083260 | 42.476 | 412 | 227 | 4 | 4 | 414 | 22 | 424 | 7.53e-128 | 375 |
| MS.gene95624.t1 | MTR_3g070900 | 47.688 | 346 | 179 | 2 | 71 | 414 | 104 | 449 | 1.77e-125 | 370 |
| MS.gene95624.t1 | MTR_3g071650 | 45.906 | 342 | 185 | 0 | 73 | 414 | 89 | 430 | 3.04e-119 | 354 |
| MS.gene95624.t1 | MTR_5g082880 | 46.418 | 349 | 182 | 3 | 71 | 414 | 163 | 511 | 4.87e-119 | 356 |
| MS.gene95624.t1 | MTR_4g014430 | 46.532 | 346 | 180 | 4 | 70 | 414 | 105 | 446 | 5.19e-111 | 333 |
| MS.gene95624.t1 | MTR_4g014440 | 45.845 | 349 | 181 | 5 | 72 | 414 | 61 | 407 | 1.07e-110 | 331 |
| MS.gene95624.t1 | MTR_7g070060 | 43.343 | 353 | 192 | 5 | 68 | 414 | 59 | 409 | 7.53e-108 | 324 |
| MS.gene95624.t1 | MTR_1g112210 | 40.634 | 347 | 182 | 8 | 71 | 414 | 57 | 382 | 1.56e-89 | 276 |
| MS.gene95624.t1 | MTR_1g112210 | 40.634 | 347 | 169 | 9 | 71 | 414 | 57 | 369 | 3.43e-88 | 272 |
| MS.gene95624.t1 | MTR_1g050448 | 39.655 | 348 | 185 | 8 | 70 | 414 | 50 | 375 | 3.95e-86 | 267 |
| MS.gene95624.t1 | MTR_7g070060 | 44.068 | 295 | 157 | 5 | 126 | 414 | 15 | 307 | 7.43e-86 | 264 |
| MS.gene95624.t1 | MTR_3g464570 | 38.150 | 346 | 198 | 6 | 73 | 414 | 43 | 376 | 1.89e-85 | 265 |
| MS.gene95624.t1 | MTR_5g071350 | 37.883 | 359 | 197 | 10 | 69 | 414 | 54 | 399 | 4.97e-82 | 257 |
| MS.gene95624.t1 | MTR_3g049330 | 36.599 | 347 | 198 | 6 | 68 | 414 | 26 | 350 | 2.23e-81 | 254 |
| MS.gene95624.t1 | MTR_5g033800 | 36.842 | 380 | 207 | 12 | 51 | 414 | 121 | 483 | 1.53e-77 | 248 |
| MS.gene95624.t1 | MTR_7g109550 | 36.676 | 349 | 196 | 9 | 73 | 414 | 137 | 467 | 3.04e-76 | 244 |
| MS.gene95624.t1 | MTR_4g079700 | 36.550 | 342 | 192 | 7 | 73 | 414 | 47 | 363 | 3.45e-75 | 238 |
| MS.gene95624.t1 | MTR_7g093450 | 36.752 | 351 | 204 | 8 | 72 | 414 | 247 | 587 | 9.88e-75 | 244 |
| MS.gene95624.t1 | MTR_4g126950 | 35.613 | 351 | 208 | 7 | 71 | 414 | 107 | 446 | 3.01e-74 | 239 |
| MS.gene95624.t1 | MTR_0136s0010 | 37.322 | 351 | 202 | 9 | 72 | 414 | 169 | 509 | 3.18e-74 | 241 |
| MS.gene95624.t1 | MTR_5g034810 | 38.304 | 342 | 187 | 9 | 73 | 414 | 35 | 352 | 2.81e-73 | 233 |
| MS.gene95624.t1 | MTR_2g073510 | 35.714 | 350 | 202 | 7 | 66 | 414 | 26 | 353 | 4.25e-73 | 233 |
| MS.gene95624.t1 | MTR_2g091175 | 35.652 | 345 | 197 | 8 | 70 | 414 | 47 | 366 | 5.71e-73 | 233 |
| MS.gene95624.t1 | MTR_4g088030 | 35.362 | 345 | 199 | 7 | 70 | 414 | 30 | 350 | 1.61e-72 | 231 |
| MS.gene95624.t1 | MTR_4g121560 | 33.242 | 364 | 224 | 6 | 58 | 414 | 102 | 453 | 8.71e-72 | 233 |
| MS.gene95624.t1 | MTR_5g059400 | 32.432 | 407 | 240 | 11 | 19 | 414 | 133 | 515 | 1.24e-71 | 234 |
| MS.gene95624.t1 | MTR_1g116130 | 32.432 | 407 | 240 | 11 | 19 | 414 | 133 | 515 | 1.24e-71 | 234 |
| MS.gene95624.t1 | MTR_4g087730 | 35.965 | 342 | 195 | 7 | 73 | 414 | 45 | 362 | 2.47e-71 | 228 |
| MS.gene95624.t1 | MTR_2g022560 | 37.534 | 365 | 195 | 10 | 66 | 414 | 90 | 437 | 3.47e-71 | 231 |
| MS.gene95624.t1 | MTR_2g015720 | 35.072 | 345 | 199 | 8 | 70 | 414 | 39 | 358 | 7.63e-71 | 227 |
| MS.gene95624.t1 | MTR_7g070060 | 43.750 | 240 | 132 | 2 | 68 | 305 | 59 | 297 | 1.11e-70 | 225 |
| MS.gene95624.t1 | MTR_3g021060 | 35.429 | 350 | 194 | 10 | 69 | 414 | 42 | 363 | 4.25e-70 | 225 |
| MS.gene95624.t1 | MTR_1g111010 | 36.023 | 347 | 186 | 9 | 70 | 414 | 29 | 341 | 7.26e-70 | 224 |
| MS.gene95624.t1 | MTR_8g069790 | 36.158 | 354 | 203 | 9 | 71 | 414 | 176 | 516 | 1.33e-69 | 229 |
| MS.gene95624.t1 | MTR_3g021090 | 34.971 | 346 | 193 | 10 | 69 | 410 | 27 | 344 | 5.43e-69 | 224 |
| MS.gene95624.t1 | MTR_2g073500 | 35.429 | 350 | 189 | 9 | 71 | 414 | 27 | 345 | 1.26e-68 | 221 |
| MS.gene95624.t1 | MTR_3g035830 | 34.286 | 350 | 198 | 10 | 69 | 414 | 27 | 348 | 1.55e-68 | 221 |
| MS.gene95624.t1 | MTR_3g464570 | 37.722 | 281 | 160 | 5 | 138 | 414 | 3 | 272 | 7.50e-67 | 214 |
| MS.gene95624.t1 | MTR_3g090120 | 31.308 | 428 | 248 | 10 | 6 | 414 | 59 | 459 | 1.29e-65 | 217 |
| MS.gene95624.t1 | MTR_1g058380 | 34.959 | 369 | 188 | 12 | 71 | 414 | 53 | 394 | 3.10e-64 | 211 |
| MS.gene95624.t1 | MTR_7g094750 | 32.033 | 359 | 216 | 8 | 70 | 414 | 88 | 432 | 5.94e-63 | 209 |
| MS.gene95624.t1 | MTR_8g093530 | 31.909 | 351 | 210 | 6 | 71 | 414 | 88 | 416 | 1.12e-62 | 208 |
| MS.gene95624.t1 | MTR_5g033800 | 35.926 | 270 | 148 | 8 | 51 | 305 | 121 | 380 | 9.00e-49 | 170 |
| MS.gene95624.t1 | MTR_7g094750 | 31.687 | 243 | 157 | 3 | 70 | 305 | 88 | 328 | 1.34e-42 | 152 |
| MS.gene95624.t1 | MTR_5g035150 | 31.117 | 376 | 207 | 15 | 68 | 414 | 79 | 431 | 4.58e-42 | 154 |
| MS.gene95624.t1 | MTR_8g104970 | 30.685 | 365 | 215 | 14 | 71 | 414 | 118 | 465 | 4.91e-42 | 154 |
| MS.gene95624.t1 | MTR_5g035080 | 28.906 | 384 | 215 | 16 | 62 | 414 | 64 | 420 | 3.89e-40 | 148 |
| MS.gene95624.t1 | MTR_5g035090 | 30.447 | 358 | 222 | 13 | 72 | 414 | 82 | 427 | 5.04e-40 | 148 |
| MS.gene95624.t1 | MTR_8g099300 | 25.293 | 427 | 278 | 12 | 7 | 414 | 15 | 419 | 3.99e-38 | 142 |
| MS.gene95624.t1 | MTR_6g016880 | 27.546 | 432 | 262 | 16 | 3 | 414 | 19 | 419 | 6.65e-38 | 142 |
| MS.gene95624.t1 | MTR_3g109840 | 29.891 | 368 | 207 | 14 | 73 | 414 | 73 | 415 | 1.31e-37 | 141 |
| MS.gene95624.t1 | MTR_7g019120 | 29.167 | 432 | 254 | 19 | 6 | 414 | 18 | 420 | 2.32e-37 | 141 |
| MS.gene95624.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 73 | 414 | 264 | 609 | 2.62e-37 | 143 |
| MS.gene95624.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 73 | 414 | 334 | 679 | 7.26e-37 | 142 |
| MS.gene95624.t1 | MTR_5g035070 | 30.939 | 362 | 225 | 14 | 68 | 414 | 82 | 433 | 4.16e-36 | 137 |
| MS.gene95624.t1 | MTR_8g027900 | 27.198 | 364 | 230 | 12 | 70 | 414 | 208 | 555 | 8.93e-36 | 138 |
| MS.gene95624.t1 | MTR_6g016875 | 30.194 | 361 | 223 | 12 | 70 | 414 | 61 | 408 | 8.56e-35 | 134 |
| MS.gene95624.t1 | MTR_2g016060 | 29.600 | 375 | 200 | 17 | 74 | 414 | 56 | 400 | 1.14e-34 | 133 |
| MS.gene95624.t1 | MTR_6g061710 | 25.243 | 412 | 262 | 15 | 27 | 414 | 125 | 514 | 2.66e-34 | 134 |
| MS.gene95624.t1 | MTR_1g076690 | 25.753 | 365 | 231 | 14 | 73 | 414 | 223 | 570 | 3.93e-34 | 134 |
| MS.gene95624.t1 | MTR_8g093870 | 26.558 | 369 | 221 | 15 | 70 | 414 | 130 | 472 | 1.81e-32 | 128 |
| MS.gene95624.t1 | MTR_4g125060 | 27.596 | 366 | 215 | 13 | 73 | 414 | 132 | 471 | 2.68e-32 | 127 |
| MS.gene95624.t1 | MTR_4g125060 | 27.596 | 366 | 215 | 13 | 73 | 414 | 200 | 539 | 8.13e-32 | 127 |
| MS.gene95624.t1 | MTR_4g125060 | 28.184 | 369 | 209 | 15 | 73 | 414 | 171 | 510 | 9.28e-32 | 126 |
| MS.gene95624.t1 | MTR_4g092830 | 27.248 | 367 | 220 | 15 | 73 | 414 | 48 | 392 | 3.60e-31 | 124 |
| MS.gene95624.t1 | MTR_5g069320 | 29.000 | 300 | 141 | 9 | 120 | 407 | 147 | 386 | 1.17e-30 | 121 |
| MS.gene95624.t1 | MTR_6g007777 | 25.348 | 359 | 242 | 10 | 69 | 414 | 112 | 457 | 3.81e-30 | 121 |
| MS.gene95624.t1 | MTR_6g016240 | 26.446 | 363 | 233 | 12 | 71 | 414 | 69 | 416 | 2.22e-28 | 115 |
| MS.gene95624.t1 | MTR_7g019140 | 35.000 | 160 | 97 | 5 | 6 | 165 | 18 | 170 | 2.35e-22 | 93.6 |
| MS.gene95624.t1 | MTR_5g035120 | 44.565 | 92 | 50 | 1 | 71 | 162 | 73 | 163 | 1.02e-20 | 89.0 |
| MS.gene95624.t1 | MTR_2g022580 | 34.921 | 126 | 75 | 1 | 133 | 251 | 1 | 126 | 2.64e-16 | 75.5 |
| MS.gene95624.t1 | MTR_3g021150 | 34.906 | 106 | 61 | 2 | 271 | 373 | 6 | 106 | 1.78e-15 | 72.8 |
| MS.gene95624.t1 | MTR_5g035140 | 27.519 | 258 | 134 | 11 | 187 | 414 | 31 | 265 | 1.45e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95624.t1 | AT5G01360 | 64.286 | 420 | 144 | 2 | 1 | 414 | 15 | 434 | 0.0 | 566 |
| MS.gene95624.t1 | AT5G01360 | 70.339 | 354 | 104 | 1 | 62 | 414 | 25 | 378 | 0.0 | 546 |
| MS.gene95624.t1 | AT1G73140 | 48.442 | 353 | 174 | 3 | 63 | 414 | 60 | 405 | 1.37e-126 | 372 |
| MS.gene95624.t1 | AT3G55990 | 47.486 | 358 | 186 | 2 | 55 | 410 | 122 | 479 | 1.36e-125 | 372 |
| MS.gene95624.t1 | AT2G40150 | 47.989 | 348 | 173 | 2 | 71 | 410 | 69 | 416 | 3.48e-123 | 363 |
| MS.gene95624.t1 | AT2G40320 | 39.173 | 411 | 240 | 1 | 4 | 414 | 22 | 422 | 3.72e-119 | 353 |
| MS.gene95624.t1 | AT3G11030 | 44.348 | 345 | 191 | 1 | 71 | 414 | 104 | 448 | 2.01e-115 | 345 |
| MS.gene95624.t1 | AT2G40160 | 44.126 | 349 | 190 | 5 | 71 | 414 | 75 | 423 | 1.73e-110 | 332 |
| MS.gene95624.t1 | AT2G40160 | 44.348 | 345 | 187 | 5 | 71 | 410 | 75 | 419 | 2.23e-110 | 331 |
| MS.gene95624.t1 | AT5G01620 | 40.399 | 401 | 216 | 9 | 23 | 414 | 63 | 449 | 5.77e-108 | 325 |
| MS.gene95624.t1 | AT5G01620 | 40.399 | 401 | 216 | 9 | 23 | 414 | 63 | 449 | 5.77e-108 | 325 |
| MS.gene95624.t1 | AT5G01620 | 43.678 | 348 | 190 | 5 | 69 | 414 | 114 | 457 | 2.15e-107 | 324 |
| MS.gene95624.t1 | AT2G38320 | 42.618 | 359 | 198 | 5 | 62 | 414 | 48 | 404 | 4.99e-105 | 317 |
| MS.gene95624.t1 | AT2G38320 | 43.750 | 320 | 172 | 5 | 101 | 414 | 4 | 321 | 9.94e-95 | 287 |
| MS.gene95624.t1 | AT5G58600 | 37.571 | 354 | 204 | 8 | 66 | 414 | 59 | 400 | 4.09e-84 | 263 |
| MS.gene95624.t1 | AT2G30900 | 40.290 | 345 | 181 | 9 | 73 | 414 | 43 | 365 | 3.83e-83 | 259 |
| MS.gene95624.t1 | AT3G62390 | 38.068 | 352 | 195 | 9 | 71 | 414 | 136 | 472 | 4.76e-82 | 260 |
| MS.gene95624.t1 | AT3G54260 | 38.551 | 345 | 188 | 8 | 73 | 414 | 51 | 374 | 9.62e-82 | 256 |
| MS.gene95624.t1 | AT1G78710 | 36.705 | 346 | 196 | 7 | 69 | 414 | 34 | 356 | 8.93e-80 | 250 |
| MS.gene95624.t1 | AT5G20590 | 36.676 | 349 | 204 | 6 | 73 | 414 | 141 | 479 | 2.12e-78 | 251 |
| MS.gene95624.t1 | AT3G12060 | 35.248 | 383 | 218 | 8 | 39 | 414 | 176 | 535 | 9.10e-78 | 251 |
| MS.gene95624.t1 | AT2G34070 | 34.783 | 345 | 202 | 5 | 70 | 414 | 62 | 383 | 2.01e-77 | 245 |
| MS.gene95624.t1 | AT5G06700 | 37.429 | 350 | 201 | 8 | 73 | 414 | 255 | 594 | 3.69e-77 | 251 |
| MS.gene95624.t1 | AT2G42570 | 34.571 | 350 | 205 | 8 | 65 | 414 | 39 | 364 | 1.91e-76 | 242 |
| MS.gene95624.t1 | AT2G31110 | 34.985 | 343 | 199 | 8 | 72 | 414 | 44 | 362 | 4.56e-76 | 241 |
| MS.gene95624.t1 | AT5G49340 | 38.136 | 354 | 195 | 10 | 73 | 414 | 100 | 441 | 6.60e-76 | 243 |
| MS.gene95624.t1 | AT1G29050 | 34.783 | 345 | 201 | 6 | 70 | 414 | 58 | 378 | 2.92e-75 | 239 |
| MS.gene95624.t1 | AT3G14850 | 35.484 | 341 | 199 | 6 | 70 | 410 | 31 | 350 | 8.77e-73 | 232 |
| MS.gene95624.t1 | AT2G40160 | 44.958 | 238 | 128 | 3 | 71 | 305 | 75 | 312 | 1.45e-72 | 230 |
| MS.gene95624.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 66 | 414 | 49 | 396 | 1.01e-71 | 231 |
| MS.gene95624.t1 | AT1G48880 | 35.795 | 352 | 191 | 9 | 72 | 414 | 114 | 439 | 1.66e-71 | 231 |
| MS.gene95624.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 66 | 414 | 92 | 439 | 2.18e-71 | 231 |
| MS.gene95624.t1 | AT1G60790 | 33.512 | 373 | 217 | 10 | 58 | 414 | 175 | 532 | 1.56e-67 | 224 |
| MS.gene95624.t1 | AT3G06080 | 34.930 | 355 | 206 | 9 | 73 | 414 | 103 | 445 | 4.65e-63 | 210 |
| MS.gene95624.t1 | AT5G19160 | 33.894 | 357 | 210 | 7 | 73 | 414 | 99 | 444 | 1.53e-61 | 206 |
| MS.gene95624.t1 | AT5G06230 | 33.978 | 362 | 207 | 9 | 70 | 414 | 18 | 364 | 2.53e-60 | 200 |
| MS.gene95624.t1 | AT5G06230 | 33.978 | 362 | 207 | 9 | 70 | 414 | 59 | 405 | 7.83e-60 | 200 |
| MS.gene95624.t1 | AT3G62390 | 38.272 | 243 | 139 | 4 | 71 | 306 | 136 | 374 | 1.53e-57 | 194 |
| MS.gene95624.t1 | AT1G78710 | 31.214 | 346 | 162 | 8 | 69 | 414 | 27 | 296 | 2.65e-55 | 185 |
| MS.gene95624.t1 | AT5G58600 | 38.174 | 241 | 140 | 5 | 66 | 305 | 59 | 291 | 5.10e-54 | 181 |
| MS.gene95624.t1 | AT2G30900 | 42.035 | 226 | 120 | 6 | 73 | 296 | 43 | 259 | 6.42e-54 | 181 |
| MS.gene95624.t1 | AT3G11570 | 32.456 | 342 | 194 | 10 | 90 | 414 | 98 | 419 | 2.43e-53 | 183 |
| MS.gene95624.t1 | AT2G34070 | 32.472 | 271 | 161 | 4 | 144 | 414 | 1 | 249 | 6.89e-52 | 174 |
| MS.gene95624.t1 | AT2G31110 | 35.556 | 225 | 136 | 4 | 72 | 296 | 44 | 259 | 1.66e-51 | 174 |
| MS.gene95624.t1 | AT5G20590 | 36.667 | 240 | 143 | 3 | 73 | 305 | 141 | 378 | 3.56e-51 | 176 |
| MS.gene95624.t1 | AT5G19160 | 36.667 | 240 | 143 | 3 | 73 | 305 | 99 | 336 | 2.38e-47 | 166 |
| MS.gene95624.t1 | AT3G14850 | 32.959 | 267 | 159 | 5 | 144 | 410 | 1 | 247 | 2.83e-47 | 162 |
| MS.gene95624.t1 | AT3G06080 | 37.344 | 241 | 140 | 5 | 73 | 305 | 103 | 340 | 1.18e-45 | 161 |
| MS.gene95624.t1 | AT1G70230 | 28.329 | 353 | 230 | 9 | 69 | 414 | 75 | 411 | 6.83e-41 | 150 |
| MS.gene95624.t1 | AT5G64020 | 28.997 | 369 | 218 | 16 | 73 | 414 | 57 | 408 | 7.50e-41 | 150 |
| MS.gene95624.t1 | AT2G31110 | 33.621 | 232 | 131 | 7 | 183 | 414 | 6 | 214 | 4.02e-39 | 140 |
| MS.gene95624.t1 | AT5G06230 | 32.669 | 251 | 150 | 5 | 70 | 305 | 59 | 305 | 1.18e-38 | 141 |
| MS.gene95624.t1 | AT2G14530 | 26.722 | 363 | 233 | 10 | 70 | 414 | 59 | 406 | 5.89e-37 | 139 |
| MS.gene95624.t1 | AT1G01430 | 27.348 | 362 | 236 | 12 | 70 | 414 | 96 | 447 | 8.85e-37 | 140 |
| MS.gene95624.t1 | AT2G37720 | 27.957 | 372 | 216 | 15 | 68 | 414 | 138 | 482 | 2.23e-36 | 139 |
| MS.gene95624.t1 | AT5G64470 | 27.401 | 354 | 231 | 13 | 73 | 414 | 55 | 394 | 3.42e-36 | 137 |
| MS.gene95624.t1 | AT5G15890 | 27.708 | 397 | 245 | 13 | 37 | 414 | 149 | 522 | 1.08e-34 | 135 |
| MS.gene95624.t1 | AT3G02440 | 28.134 | 359 | 224 | 13 | 73 | 414 | 127 | 468 | 4.71e-34 | 132 |
| MS.gene95624.t1 | AT3G02440 | 28.134 | 359 | 224 | 13 | 73 | 414 | 135 | 476 | 4.80e-34 | 132 |
| MS.gene95624.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 72 | 414 | 174 | 524 | 9.90e-34 | 132 |
| MS.gene95624.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 72 | 414 | 174 | 524 | 9.90e-34 | 132 |
| MS.gene95624.t1 | AT4G01080 | 24.432 | 352 | 244 | 10 | 70 | 411 | 88 | 427 | 5.71e-33 | 129 |
| MS.gene95624.t1 | AT5G64470 | 27.072 | 362 | 228 | 15 | 73 | 414 | 55 | 400 | 1.28e-32 | 127 |
| MS.gene95624.t1 | AT5G51640 | 26.076 | 395 | 241 | 16 | 46 | 414 | 119 | 488 | 4.06e-32 | 127 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 90 | 457 | 5.60e-32 | 126 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 184 | 551 | 7.86e-32 | 127 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 184 | 551 | 7.86e-32 | 127 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 184 | 551 | 7.86e-32 | 127 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 184 | 551 | 7.86e-32 | 127 |
| MS.gene95624.t1 | AT5G20680 | 25.320 | 391 | 251 | 15 | 42 | 414 | 166 | 533 | 9.28e-32 | 127 |
| MS.gene95624.t1 | AT4G23790 | 26.400 | 375 | 229 | 14 | 67 | 414 | 73 | 427 | 3.32e-31 | 124 |
| MS.gene95624.t1 | AT5G15900 | 27.596 | 366 | 222 | 15 | 71 | 414 | 65 | 409 | 7.79e-30 | 120 |
| MS.gene95624.t1 | AT5G15900 | 27.596 | 366 | 222 | 15 | 71 | 414 | 84 | 428 | 1.20e-29 | 120 |
| MS.gene95624.t1 | AT4G11090 | 25.333 | 375 | 231 | 14 | 67 | 414 | 73 | 425 | 3.37e-29 | 118 |
| MS.gene95624.t1 | AT3G28150 | 23.502 | 434 | 257 | 15 | 4 | 414 | 29 | 410 | 1.39e-26 | 110 |
| MS.gene95624.t1 | AT5G64470 | 27.509 | 269 | 177 | 11 | 73 | 330 | 55 | 316 | 9.05e-20 | 89.7 |
| MS.gene95624.t1 | AT5G64470 | 26.449 | 276 | 186 | 10 | 73 | 337 | 55 | 324 | 1.76e-19 | 89.0 |
Find 68 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAGACTTGGGCTAAT+TGG | 0.164498 | 7.4:-34641159 | MS.gene95624:CDS |
| GAAAATTGTCTTTCTATATA+TGG | 0.208909 | 7.4:+34642260 | None:intergenic |
| GCAACATTGCCAATGGAAAA+TGG | 0.220734 | 7.4:-34642328 | MS.gene95624:CDS |
| AATATTTGATTCCATGTATC+TGG | 0.237560 | 7.4:+34640189 | None:intergenic |
| CTTGGCAAGGTGCAATCTTC+TGG | 0.242629 | 7.4:+34642185 | None:intergenic |
| ACAAGGTTTGAACTTGAAAA+TGG | 0.243164 | 7.4:+34642784 | None:intergenic |
| TCTTCAGTGTATACTGAAAA+TGG | 0.259741 | 7.4:-34640288 | MS.gene95624:CDS |
| TTTAGTCTGGTGTTCTTTCT+AGG | 0.269729 | 7.4:+34642761 | None:intergenic |
| ATTCTACTGGGCCCCATATC+TGG | 0.307323 | 7.4:-34641721 | MS.gene95624:CDS |
| AACACTGACATACATTTCAT+TGG | 0.355620 | 7.4:-34641690 | MS.gene95624:CDS |
| TTTGAAGACTTGGGCTAATT+GGG | 0.366796 | 7.4:-34641158 | MS.gene95624:CDS |
| CATTTACCAGAAGTCAAGAT+TGG | 0.370501 | 7.4:-34640491 | MS.gene95624:intron |
| TGTAGATTGGCTTTATTGAT+TGG | 0.377295 | 7.4:+34642297 | None:intergenic |
| GTTACGTTGATGAATGTAAC+TGG | 0.382881 | 7.4:+34640342 | None:intergenic |
| ATATCAGAATATAGAATTGA+TGG | 0.401543 | 7.4:-34640315 | MS.gene95624:CDS |
| GGGAAAAGACTACTATTTGT+AGG | 0.402810 | 7.4:-34642026 | MS.gene95624:CDS |
| GTGTTAGACTCAACCAGATA+TGG | 0.402888 | 7.4:+34641708 | None:intergenic |
| ATGCTAGTATAGAATTCTAC+TGG | 0.404319 | 7.4:-34641734 | MS.gene95624:CDS |
| ACAAGTTAGCTTTGAAGACT+TGG | 0.409219 | 7.4:-34641168 | MS.gene95624:CDS |
| CAAATAGAGATGATAATGAT+AGG | 0.414378 | 7.4:+34642866 | None:intergenic |
| CAAGTTATGTCAGTGTAGAT+TGG | 0.416949 | 7.4:+34642284 | None:intergenic |
| ATTTACCAGAAGTCAAGATT+GGG | 0.419364 | 7.4:-34640490 | MS.gene95624:intron |
| CAACATTGCCAATGGAAAAT+GGG | 0.423964 | 7.4:-34642327 | MS.gene95624:CDS |
| TATGGTGGATGAGTGGTTCT+AGG | 0.424096 | 7.4:-34641575 | MS.gene95624:CDS |
| TTCACTTCAAAGAAATCAAT+GGG | 0.450238 | 7.4:-34642000 | MS.gene95624:CDS |
| TGCATACATTGGTGTTTGCC+TGG | 0.450244 | 7.4:-34640216 | MS.gene95624:CDS |
| CTGGTGTTCTTTCTAGGACA+AGG | 0.456429 | 7.4:+34642767 | None:intergenic |
| TCATTTAGCAATGGATTTGA+AGG | 0.461734 | 7.4:-34641220 | MS.gene95624:CDS |
| ATTCACTTCAAAGAAATCAA+TGG | 0.464902 | 7.4:-34642001 | MS.gene95624:CDS |
| AGATTCTGATTATCAACATT+GGG | 0.465574 | 7.4:-34642216 | MS.gene95624:CDS |
| AAAGAAAAGGATAATAAAAG+TGG | 0.472940 | 7.4:-34641661 | MS.gene95624:CDS |
| GGAAAAGACTACTATTTGTA+GGG | 0.479501 | 7.4:-34642025 | MS.gene95624:CDS |
| TGTTAGACTCAACCAGATAT+GGG | 0.481344 | 7.4:+34641709 | None:intergenic |
| GAGATGATAATGATAGGAAA+AGG | 0.487294 | 7.4:+34642872 | None:intergenic |
| AATCAGAAATCTATGAAAAG+AGG | 0.494302 | 7.4:-34641939 | MS.gene95624:CDS |
| AAAGCTAACTTGTATGCTAC+TGG | 0.494526 | 7.4:+34641178 | None:intergenic |
| ATCAGAAATCTATGAAAAGA+GGG | 0.504271 | 7.4:-34641938 | MS.gene95624:CDS |
| CTATCAATCCAAACAAAACA+AGG | 0.508070 | 7.4:-34641126 | MS.gene95624:CDS |
| CAGATTCTGATTATCAACAT+TGG | 0.508716 | 7.4:-34642217 | MS.gene95624:CDS |
| TGCCTGGTGTTCCAGATACA+TGG | 0.510835 | 7.4:-34640200 | MS.gene95624:CDS |
| CAAGTTAGCTTTGAAGACTT+GGG | 0.522945 | 7.4:-34641167 | MS.gene95624:CDS |
| CTGATTATCAACATTGGGAG+TGG | 0.529866 | 7.4:-34642211 | MS.gene95624:CDS |
| ATGCAACATGGATTGATGAC+AGG | 0.540613 | 7.4:-34642373 | MS.gene95624:CDS |
| CATTTAGCAATGGATTTGAA+GGG | 0.555614 | 7.4:-34641219 | MS.gene95624:CDS |
| AGATGATAAGAAAGTTGATG+AGG | 0.555639 | 7.4:-34642405 | MS.gene95624:CDS |
| TCATTGGAGATACAAAGAAA+AGG | 0.557285 | 7.4:-34641674 | MS.gene95624:CDS |
| TCATTCAGTCTTCAAAGTCA+AGG | 0.570752 | 7.4:-34641910 | MS.gene95624:intron |
| AATTGTTAAGTGAAGAAGAG+AGG | 0.575802 | 7.4:-34640260 | MS.gene95624:CDS |
| AGATGGGGTTCATTTAGCAA+TGG | 0.578823 | 7.4:-34641229 | MS.gene95624:CDS |
| GAAGAATGCAACATTGCCAA+TGG | 0.580954 | 7.4:-34642335 | MS.gene95624:CDS |
| TTCCATGTATCTGGAACACC+AGG | 0.581846 | 7.4:+34640198 | None:intergenic |
| TTTACCAGAAGTCAAGATTG+GGG | 0.598053 | 7.4:-34640489 | MS.gene95624:intron |
| CAGAAGATTGCACCTTGCCA+AGG | 0.600519 | 7.4:-34642184 | MS.gene95624:intron |
| GAAAAGACTACTATTTGTAG+GGG | 0.609179 | 7.4:-34642024 | MS.gene95624:CDS |
| CAGTGTATACTGAAAATGGA+GGG | 0.619439 | 7.4:-34640284 | MS.gene95624:CDS |
| AAAATGCAGATTGCATACAT+TGG | 0.635099 | 7.4:-34640227 | MS.gene95624:CDS |
| ACCACTCATCCACCATACAT+AGG | 0.637859 | 7.4:+34641581 | None:intergenic |
| CAATGTCACCTACACACACA+AGG | 0.637869 | 7.4:-34641090 | MS.gene95624:intron |
| GAGAAAGACCTTGTGTGTGT+AGG | 0.641401 | 7.4:+34641082 | None:intergenic |
| GTTAGACTCAACCAGATATG+GGG | 0.642606 | 7.4:+34641710 | None:intergenic |
| TGCTAGTATAGAATTCTACT+GGG | 0.645271 | 7.4:-34641733 | MS.gene95624:CDS |
| GTGTGGAACTTACCTTGGCA+AGG | 0.655568 | 7.4:+34642172 | None:intergenic |
| TGATAAACGTATAATGAGTG+TGG | 0.658568 | 7.4:-34640394 | MS.gene95624:CDS |
| AGGAGATTGTAAATGCAACA+TGG | 0.660136 | 7.4:-34642385 | MS.gene95624:CDS |
| ACCTATGTATGGTGGATGAG+TGG | 0.661766 | 7.4:-34641582 | MS.gene95624:CDS |
| TATCAATCCAAACAAAACAA+GGG | 0.665595 | 7.4:-34641125 | MS.gene95624:CDS |
| TCAGTGTATACTGAAAATGG+AGG | 0.667022 | 7.4:-34640285 | MS.gene95624:CDS |
| TCAGAAATCTATGAAAAGAG+GGG | 0.685360 | 7.4:-34641937 | MS.gene95624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAGTGTATATTATA+AGG | + | chr7.4:34642031-34642050 | None:intergenic | 10.0% |
| !! | ATCATTGCATAAAAAATTTA+GGG | + | chr7.4:34640595-34640614 | None:intergenic | 15.0% |
| !! | CAATAAAAGTTATTACTTTA+AGG | - | chr7.4:34641229-34641248 | MS.gene95624:CDS | 15.0% |
| !! | TTAATGATTTAATTCGAATA+GGG | + | chr7.4:34641525-34641544 | None:intergenic | 15.0% |
| !! | TTTAATGATTTAATTCGAAT+AGG | + | chr7.4:34641526-34641545 | None:intergenic | 15.0% |
| !!! | CAATTTTCTTGTATAAAAAA+TGG | - | chr7.4:34640803-34640822 | MS.gene95624:intron | 15.0% |
| !! | AAAGAAAAGGATAATAAAAG+TGG | - | chr7.4:34641387-34641406 | MS.gene95624:intron | 20.0% |
| !! | AGAAAATAACATAATTCAGT+CGG | + | chr7.4:34642396-34642415 | None:intergenic | 20.0% |
| !! | ATAGTACTAATATAGATACT+TGG | - | chr7.4:34641270-34641289 | MS.gene95624:intron | 20.0% |
| !! | ATATCAGAATATAGAATTGA+TGG | - | chr7.4:34642733-34642752 | MS.gene95624:intron | 20.0% |
| !! | ATATTATAATGCAACAAAGA+AGG | + | chr7.4:34642330-34642349 | None:intergenic | 20.0% |
| !! | CATCATTGCATAAAAAATTT+AGG | + | chr7.4:34640596-34640615 | None:intergenic | 20.0% |
| !! | GAAAATTGTCTTTCTATATA+TGG | + | chr7.4:34640791-34640810 | None:intergenic | 20.0% |
| !!! | AATGTCATGATTTTAAATTG+CGG | - | chr7.4:34641567-34641586 | MS.gene95624:CDS | 20.0% |
| !!! | CTAGTTTATGAATTTTAGAT+GGG | - | chr7.4:34641803-34641822 | MS.gene95624:intron | 20.0% |
| !!! | TACATGGAATCAAATATTTT+TGG | - | chr7.4:34642864-34642883 | MS.gene95624:CDS | 20.0% |
| !!! | TAGTTTATGAATTTTAGATG+GGG | - | chr7.4:34641804-34641823 | MS.gene95624:intron | 20.0% |
| !!! | TCTAGTTTATGAATTTTAGA+TGG | - | chr7.4:34641802-34641821 | MS.gene95624:intron | 20.0% |
| !!! | TTTTATACTCTTAAACCAAA+GGG | - | chr7.4:34641760-34641779 | MS.gene95624:intron | 20.0% |
| !!! | TTTTTATACTCTTAAACCAA+AGG | - | chr7.4:34641759-34641778 | MS.gene95624:intron | 20.0% |
| ! | AATATTTGATTCCATGTATC+TGG | + | chr7.4:34642862-34642881 | None:intergenic | 25.0% |
| ! | AATCAGAAATCTATGAAAAG+AGG | - | chr7.4:34641109-34641128 | MS.gene95624:CDS | 25.0% |
| ! | AGATTCTGATTATCAACATT+GGG | - | chr7.4:34640832-34640851 | MS.gene95624:intron | 25.0% |
| ! | ATCAGAAATCTATGAAAAGA+GGG | - | chr7.4:34641110-34641129 | MS.gene95624:CDS | 25.0% |
| ! | ATCTCTGAATTATTGAATGT+CGG | - | chr7.4:34640540-34640559 | MS.gene95624:intron | 25.0% |
| ! | ATTCACTTCAAAGAAATCAA+TGG | - | chr7.4:34641047-34641066 | MS.gene95624:intron | 25.0% |
| ! | CATTGTTTAATACACTTACA+AGG | + | chr7.4:34640951-34640970 | None:intergenic | 25.0% |
| ! | GCATTATAATATATGAAGCA+CGG | - | chr7.4:34642338-34642357 | MS.gene95624:CDS | 25.0% |
| ! | GTAATCACAATTAACATGTT+TGG | + | chr7.4:34640910-34640929 | None:intergenic | 25.0% |
| ! | GTGAGTATTATAAATCTTAG+AGG | + | chr7.4:34642163-34642182 | None:intergenic | 25.0% |
| ! | TATCAATCCAAACAAAACAA+GGG | - | chr7.4:34641923-34641942 | MS.gene95624:CDS | 25.0% |
| ! | TTCACTTCAAAGAAATCAAT+GGG | - | chr7.4:34641048-34641067 | MS.gene95624:intron | 25.0% |
| !! | AGTTTTTCTTCTAACAATGT+TGG | - | chr7.4:34642231-34642250 | MS.gene95624:CDS | 25.0% |
| !! | CAAATAGAGATGATAATGAT+AGG | + | chr7.4:34640185-34640204 | None:intergenic | 25.0% |
| !! | TTCATAGATTTCTGATTTTG+AGG | + | chr7.4:34641106-34641125 | None:intergenic | 25.0% |
| !! | TTGTTTTCAATACCTATGTA+TGG | - | chr7.4:34641455-34641474 | MS.gene95624:intron | 25.0% |
| !!! | TCTCTTCTAAAGTATTTTCT+TGG | - | chr7.4:34641987-34642006 | MS.gene95624:CDS | 25.0% |
| !!! | TTCATCATGGTTTTAAATTG+CGG | + | chr7.4:34641713-34641732 | None:intergenic | 25.0% |
| AAAATGCAGATTGCATACAT+TGG | - | chr7.4:34642821-34642840 | MS.gene95624:CDS | 30.0% | |
| AACACTGACATACATTTCAT+TGG | - | chr7.4:34641358-34641377 | MS.gene95624:intron | 30.0% | |
| AAGTAGACTAAATATTGCAG+TGG | + | chr7.4:34642111-34642130 | None:intergenic | 30.0% | |
| AATTGTTAAGTGAAGAAGAG+AGG | - | chr7.4:34642788-34642807 | MS.gene95624:CDS | 30.0% | |
| ACAAGGTTTGAACTTGAAAA+TGG | + | chr7.4:34640267-34640286 | None:intergenic | 30.0% | |
| ATGCTAGTATAGAATTCTAC+TGG | - | chr7.4:34641314-34641333 | MS.gene95624:intron | 30.0% | |
| ATTTACCAGAAGTCAAGATT+GGG | - | chr7.4:34642558-34642577 | MS.gene95624:intron | 30.0% | |
| CAATTAACATGTTTGGACAT+TGG | + | chr7.4:34640903-34640922 | None:intergenic | 30.0% | |
| CAGATTCTGATTATCAACAT+TGG | - | chr7.4:34640831-34640850 | MS.gene95624:intron | 30.0% | |
| CATATTTCACCGCAATATAA+TGG | + | chr7.4:34641617-34641636 | None:intergenic | 30.0% | |
| CATGTAGAAAATTGCTTACA+AGG | - | chr7.4:34642256-34642275 | MS.gene95624:CDS | 30.0% | |
| CTATCAATCCAAACAAAACA+AGG | - | chr7.4:34641922-34641941 | MS.gene95624:CDS | 30.0% | |
| GAAAAGACTACTATTTGTAG+GGG | - | chr7.4:34641024-34641043 | MS.gene95624:intron | 30.0% | |
| GGAAAAGACTACTATTTGTA+GGG | - | chr7.4:34641023-34641042 | MS.gene95624:intron | 30.0% | |
| TAGCACTCAAAAAACTTCAA+GGG | - | chr7.4:34641002-34641021 | MS.gene95624:intron | 30.0% | |
| TCAAAGAGAGAGCAAAAAAT+TGG | - | chr7.4:34641416-34641435 | MS.gene95624:intron | 30.0% | |
| TCAGAAATCTATGAAAAGAG+GGG | - | chr7.4:34641111-34641130 | MS.gene95624:CDS | 30.0% | |
| TCATTGGAGATACAAAGAAA+AGG | - | chr7.4:34641374-34641393 | MS.gene95624:intron | 30.0% | |
| TCATTGTTGAATGTTCATCA+TGG | + | chr7.4:34641726-34641745 | None:intergenic | 30.0% | |
| TCTTCAGTGTATACTGAAAA+TGG | - | chr7.4:34642760-34642779 | MS.gene95624:CDS | 30.0% | |
| TGATAAACGTATAATGAGTG+TGG | - | chr7.4:34642654-34642673 | MS.gene95624:intron | 30.0% | |
| TGCTAGTATAGAATTCTACT+GGG | - | chr7.4:34641315-34641334 | MS.gene95624:intron | 30.0% | |
| TTAAACCAAAGGGATGAAAA+TGG | - | chr7.4:34641770-34641789 | MS.gene95624:intron | 30.0% | |
| TTAGCACTCAAAAAACTTCA+AGG | - | chr7.4:34641001-34641020 | MS.gene95624:intron | 30.0% | |
| ! | AAATACCATTTTCATCCCTT+TGG | + | chr7.4:34641778-34641797 | None:intergenic | 30.0% |
| ! | AATTTAGGGTCCATTTGATA+CGG | + | chr7.4:34640581-34640600 | None:intergenic | 30.0% |
| ! | ATGGGAATCTTTTGTATGTT+TGG | - | chr7.4:34641066-34641085 | MS.gene95624:intron | 30.0% |
| ! | CATTTAGCAATGGATTTGAA+GGG | - | chr7.4:34641829-34641848 | MS.gene95624:intron | 30.0% |
| ! | CTTGTAAGCAATTTTCTACA+TGG | + | chr7.4:34642258-34642277 | None:intergenic | 30.0% |
| ! | CTTTTGTATGTTTGGTAGAA+TGG | - | chr7.4:34641074-34641093 | MS.gene95624:intron | 30.0% |
| ! | GAGATGATAATGATAGGAAA+AGG | + | chr7.4:34640179-34640198 | None:intergenic | 30.0% |
| ! | GTTAAAAACCCATTTTCCAT+TGG | + | chr7.4:34640732-34640751 | None:intergenic | 30.0% |
| ! | TCATTTAGCAATGGATTTGA+AGG | - | chr7.4:34641828-34641847 | MS.gene95624:intron | 30.0% |
| ! | TTTTCAATACCTATGTATGG+TGG | - | chr7.4:34641458-34641477 | MS.gene95624:intron | 30.0% |
| ! | TTTTTACGATCCGTATCAAA+TGG | - | chr7.4:34640568-34640587 | MS.gene95624:intron | 30.0% |
| !! | AGACTTACTTGATTTTAGTC+TGG | + | chr7.4:34640303-34640322 | None:intergenic | 30.0% |
| !! | AGATGATAAGAAAGTTGATG+AGG | - | chr7.4:34640643-34640662 | MS.gene95624:intron | 30.0% |
| !! | AGTGAGAAAAAAGAAGCATT+GGG | - | chr7.4:34642621-34642640 | MS.gene95624:intron | 30.0% |
| !! | GAATTTGTTTAAGCCTTGTT+TGG | + | chr7.4:34641210-34641229 | None:intergenic | 30.0% |
| !! | TGTAGATTGGCTTTATTGAT+TGG | + | chr7.4:34640754-34640773 | None:intergenic | 30.0% |
| !! | TTAAGCCTTGTTTGGATAAA+CGG | + | chr7.4:34641202-34641221 | None:intergenic | 30.0% |
| AACTGCTTCGAATGAAAAGT+TGG | - | chr7.4:34640478-34640497 | MS.gene95624:CDS | 35.0% | |
| ACACTTACAAGGCTAAAAGA+TGG | + | chr7.4:34640940-34640959 | None:intergenic | 35.0% | |
| AGGAGATTGTAAATGCAACA+TGG | - | chr7.4:34640663-34640682 | MS.gene95624:intron | 35.0% | |
| AGTCAATGTAGCCACAATTA+CGG | - | chr7.4:34641646-34641665 | MS.gene95624:CDS | 35.0% | |
| ATACTTGGATGTGTTGTAAC+AGG | - | chr7.4:34641285-34641304 | MS.gene95624:intron | 35.0% | |
| ATAGTGCTCAACAAATCTCT+AGG | + | chr7.4:34642500-34642519 | None:intergenic | 35.0% | |
| ATCACCTGCATTAGACTTAA+TGG | - | chr7.4:34642198-34642217 | MS.gene95624:CDS | 35.0% | |
| CAACATTGCCAATGGAAAAT+GGG | - | chr7.4:34640721-34640740 | MS.gene95624:intron | 35.0% | |
| CAACTTTCTTATCATCTGCT+AGG | + | chr7.4:34640640-34640659 | None:intergenic | 35.0% | |
| CAAGTTATGTCAGTGTAGAT+TGG | + | chr7.4:34640767-34640786 | None:intergenic | 35.0% | |
| CAATTGCAGCCACAATATAA+CGG | + | chr7.4:34641680-34641699 | None:intergenic | 35.0% | |
| CAGTGTATACTGAAAATGGA+GGG | - | chr7.4:34642764-34642783 | MS.gene95624:CDS | 35.0% | |
| CATTTACCAGAAGTCAAGAT+TGG | - | chr7.4:34642557-34642576 | MS.gene95624:intron | 35.0% | |
| CGAAAATGAAGATGTAGTTG+TGG | + | chr7.4:34640339-34640358 | None:intergenic | 35.0% | |
| GGGAAAAGACTACTATTTGT+AGG | - | chr7.4:34641022-34641041 | MS.gene95624:intron | 35.0% | |
| TCAGTGTATACTGAAAATGG+AGG | - | chr7.4:34642763-34642782 | MS.gene95624:CDS | 35.0% | |
| TCATTCAGTCTTCAAAGTCA+AGG | - | chr7.4:34641138-34641157 | MS.gene95624:CDS | 35.0% | |
| TGATGAGTAGGAATTGTACT+CGG | - | chr7.4:34642135-34642154 | MS.gene95624:intron | 35.0% | |
| TGTTAGACTCAACCAGATAT+GGG | + | chr7.4:34641342-34641361 | None:intergenic | 35.0% | |
| TTAAATTGCGGTTGTAGTTG+CGG | - | chr7.4:34641579-34641598 | MS.gene95624:CDS | 35.0% | |
| TTAAGTCTAATGCAGGTGAT+TGG | + | chr7.4:34642198-34642217 | None:intergenic | 35.0% | |
| TTTACCAGAAGTCAAGATTG+GGG | - | chr7.4:34642559-34642578 | MS.gene95624:intron | 35.0% | |
| TTTAGCCGTTTATCCAAACA+AGG | - | chr7.4:34641194-34641213 | MS.gene95624:CDS | 35.0% | |
| TTTAGTCTGGTGTTCTTTCT+AGG | + | chr7.4:34640290-34640309 | None:intergenic | 35.0% | |
| TTTCACCGCAATATAATGGT+TGG | + | chr7.4:34641613-34641632 | None:intergenic | 35.0% | |
| TTTGAAGACTTGGGCTAATT+GGG | - | chr7.4:34641890-34641909 | MS.gene95624:intron | 35.0% | |
| ! | AAAGCTAACTTGTATGCTAC+TGG | + | chr7.4:34641873-34641892 | None:intergenic | 35.0% |
| ! | CAGTGAGAAAAAAGAAGCAT+TGG | - | chr7.4:34642620-34642639 | MS.gene95624:intron | 35.0% |
| ! | GTTACGTTGATGAATGTAAC+TGG | + | chr7.4:34642709-34642728 | None:intergenic | 35.0% |
| ! | TGTATGCAATCTGCATTTTG+TGG | + | chr7.4:34642820-34642839 | None:intergenic | 35.0% |
| !! | ACAAGTTAGCTTTGAAGACT+TGG | - | chr7.4:34641880-34641899 | MS.gene95624:intron | 35.0% |
| !! | CAAGTTAGCTTTGAAGACTT+GGG | - | chr7.4:34641881-34641900 | MS.gene95624:intron | 35.0% |
| !! | GTGAGAAAAAAGAAGCATTG+GGG | - | chr7.4:34642622-34642641 | MS.gene95624:intron | 35.0% |
| !!! | AAGAAGACCCTTGTTTTGTT+TGG | + | chr7.4:34641933-34641952 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGAGTGCTAACAC+TGG | + | chr7.4:34640998-34641017 | None:intergenic | 35.0% |
| !!! | CAATGCTTCTTTTTTCTCAC+TGG | + | chr7.4:34642622-34642641 | None:intergenic | 35.0% |
| !!! | GTCTACTTTTTGTGATGAGT+AGG | - | chr7.4:34642123-34642142 | MS.gene95624:intron | 35.0% |
| AGATGGGGTTCATTTAGCAA+TGG | - | chr7.4:34641819-34641838 | MS.gene95624:intron | 40.0% | |
| AGCAAAAAATTGGACAGGAG+TGG | - | chr7.4:34641426-34641445 | MS.gene95624:intron | 40.0% | |
| ATGATGCACAGATACAGACA+CGG | + | chr7.4:34642468-34642487 | None:intergenic | 40.0% | |
| CTGATTATCAACATTGGGAG+TGG | - | chr7.4:34640837-34640856 | MS.gene95624:intron | 40.0% | |
| GAAGAATGCAACATTGCCAA+TGG | - | chr7.4:34640713-34640732 | MS.gene95624:intron | 40.0% | |
| GAGAGAGCAAAAAATTGGAC+AGG | - | chr7.4:34641421-34641440 | MS.gene95624:intron | 40.0% | |
| GCAACATTGCCAATGGAAAA+TGG | - | chr7.4:34640720-34640739 | MS.gene95624:intron | 40.0% | |
| GCTTCCATTAAGTCTAATGC+AGG | + | chr7.4:34642205-34642224 | None:intergenic | 40.0% | |
| GTGTTAGACTCAACCAGATA+TGG | + | chr7.4:34641343-34641362 | None:intergenic | 40.0% | |
| GTTAGACTCAACCAGATATG+GGG | + | chr7.4:34641341-34641360 | None:intergenic | 40.0% | |
| ! | ATGCAACATGGATTGATGAC+AGG | - | chr7.4:34640675-34640694 | MS.gene95624:intron | 40.0% |
| ! | CGCATGTTACTTGACTCTAA+AGG | - | chr7.4:34640357-34640376 | MS.gene95624:CDS | 40.0% |
| ! | CTTTGAAGACTTGGGCTAAT+TGG | - | chr7.4:34641889-34641908 | MS.gene95624:intron | 40.0% |
| !! | AAAAAGAAGCATTGGGGAAC+TGG | - | chr7.4:34642628-34642647 | MS.gene95624:intron | 40.0% |
| ACCACTCATCCACCATACAT+AGG | + | chr7.4:34641470-34641489 | None:intergenic | 45.0% | |
| CAATGTCACCTACACACACA+AGG | - | chr7.4:34641958-34641977 | MS.gene95624:CDS | 45.0% | |
| CATGTTTGGACATTGGAGTG+TGG | + | chr7.4:34640896-34640915 | None:intergenic | 45.0% | |
| CGCTGCCAACCATTATATTG+CGG | - | chr7.4:34641605-34641624 | MS.gene95624:CDS | 45.0% | |
| GAGAAAGACCTTGTGTGTGT+AGG | + | chr7.4:34641969-34641988 | None:intergenic | 45.0% | |
| GTTGTGAGGCCGTTATATTG+TGG | - | chr7.4:34641668-34641687 | MS.gene95624:CDS | 45.0% | |
| GTTTCCCCAATCTTGACTTC+TGG | + | chr7.4:34642566-34642585 | None:intergenic | 45.0% | |
| TAGCCACAATTACGGTTGTG+AGG | - | chr7.4:34641654-34641673 | MS.gene95624:CDS | 45.0% | |
| TTGGAGTGTGGAACTTACCT+TGG | + | chr7.4:34640884-34640903 | None:intergenic | 45.0% | |
| ! | TGCATACATTGGTGTTTGCC+TGG | - | chr7.4:34642832-34642851 | MS.gene95624:CDS | 45.0% |
| ! | TTCCATGTATCTGGAACACC+AGG | + | chr7.4:34642853-34642872 | None:intergenic | 45.0% |
| !! | ACCTATGTATGGTGGATGAG+TGG | - | chr7.4:34641466-34641485 | MS.gene95624:intron | 45.0% |
| !! | CTGGTGTTCTTTCTAGGACA+AGG | + | chr7.4:34640284-34640303 | None:intergenic | 45.0% |
| !! | TATGGTGGATGAGTGGTTCT+AGG | - | chr7.4:34641473-34641492 | MS.gene95624:intron | 45.0% |
| ATTCTACTGGGCCCCATATC+TGG | - | chr7.4:34641327-34641346 | MS.gene95624:intron | 50.0% | |
| CAGAAGATTGCACCTTGCCA+AGG | - | chr7.4:34640864-34640883 | MS.gene95624:intron | 50.0% | |
| CTTGGCAAGGTGCAATCTTC+TGG | + | chr7.4:34640866-34640885 | None:intergenic | 50.0% | |
| GTGTGGAACTTACCTTGGCA+AGG | + | chr7.4:34640879-34640898 | None:intergenic | 50.0% | |
| TGCCTGGTGTTCCAGATACA+TGG | - | chr7.4:34642848-34642867 | MS.gene95624:CDS | 50.0% | |
| TGTGGCTGCAATTGCGATTG+TGG | - | chr7.4:34641686-34641705 | MS.gene95624:CDS | 50.0% | |
| CACGGACACCAGACATGACA+CGG | + | chr7.4:34642450-34642469 | None:intergenic | 55.0% | |
| CGGCCTCACAACCGTAATTG+TGG | + | chr7.4:34641660-34641679 | None:intergenic | 55.0% | |
| GTCAGTGTCCGTGTCATGTC+TGG | - | chr7.4:34642439-34642458 | MS.gene95624:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 34640173 | 34642897 | 34640173 | ID=MS.gene95624 |
| chr7.4 | mRNA | 34640173 | 34642897 | 34640173 | ID=MS.gene95624.t1;Parent=MS.gene95624 |
| chr7.4 | exon | 34642756 | 34642897 | 34642756 | ID=MS.gene95624.t1.exon1;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34642756 | 34642897 | 34642756 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| chr7.4 | exon | 34642185 | 34642425 | 34642185 | ID=MS.gene95624.t1.exon2;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34642185 | 34642425 | 34642185 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| chr7.4 | exon | 34641911 | 34642082 | 34641911 | ID=MS.gene95624.t1.exon3;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34641911 | 34642082 | 34641911 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| chr7.4 | exon | 34641564 | 34641763 | 34641564 | ID=MS.gene95624.t1.exon4;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34641564 | 34641763 | 34641564 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| chr7.4 | exon | 34641091 | 34641249 | 34641091 | ID=MS.gene95624.t1.exon5;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34641091 | 34641249 | 34641091 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| chr7.4 | exon | 34640173 | 34640503 | 34640173 | ID=MS.gene95624.t1.exon6;Parent=MS.gene95624.t1 |
| chr7.4 | CDS | 34640173 | 34640503 | 34640173 | ID=cds.MS.gene95624.t1;Parent=MS.gene95624.t1 |
| Gene Sequence |
| Protein sequence |
