Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055721.t1 | XP_003624857.2 | 96.5 | 459 | 10 | 1 | 1 | 453 | 1 | 459 | 1.50E-262 | 914.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055721.t1 | Q9M1K5 | 51.0 | 463 | 179 | 7 | 19 | 447 | 4 | 452 | 6.8e-126 | 452.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055721.t1 | G7L4R1 | 96.5 | 459 | 10 | 1 | 1 | 453 | 1 | 459 | 1.1e-262 | 914.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055721 | MS.gene057195 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene055721 | MS.gene64394 | 0.829515 | 4.93E-55 | -1.69E-46 |
| MS.gene055721 | MS.gene66921 | 0.819396 | 1.19E-52 | -1.69E-46 |
| MS.gene055721 | MS.gene83325 | 0.808377 | 3.19E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009450 | MS.gene055721 | PPI |
| MS.gene006293 | MS.gene055721 | PPI |
| MS.gene055721 | MS.gene51623 | PPI |
| MS.gene84379 | MS.gene055721 | PPI |
| MS.gene055721 | MS.gene41434 | PPI |
| MS.gene49091 | MS.gene055721 | PPI |
| MS.gene055721 | MS.gene34495 | PPI |
| MS.gene56252 | MS.gene055721 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055721.t1 | MTR_7g088350 | 96.514 | 459 | 10 | 1 | 1 | 453 | 1 | 459 | 0.0 | 919 |
| MS.gene055721.t1 | MTR_7g088360 | 58.038 | 367 | 145 | 3 | 20 | 384 | 24 | 383 | 1.42e-153 | 442 |
| MS.gene055721.t1 | MTR_1g098390 | 50.440 | 341 | 150 | 5 | 21 | 349 | 1 | 334 | 5.80e-116 | 347 |
| MS.gene055721.t1 | MTR_6g033315 | 50.292 | 342 | 145 | 6 | 26 | 356 | 21 | 348 | 7.33e-111 | 334 |
| MS.gene055721.t1 | MTR_3g098840 | 50.962 | 312 | 139 | 4 | 16 | 321 | 12 | 315 | 1.80e-103 | 315 |
| MS.gene055721.t1 | MTR_7g083480 | 48.663 | 374 | 171 | 6 | 25 | 389 | 20 | 381 | 3.52e-103 | 314 |
| MS.gene055721.t1 | MTR_6g038020 | 50.000 | 304 | 142 | 3 | 24 | 321 | 2 | 301 | 1.45e-100 | 307 |
| MS.gene055721.t1 | MTR_6g038020 | 51.195 | 293 | 133 | 3 | 35 | 321 | 16 | 304 | 2.47e-100 | 306 |
| MS.gene055721.t1 | MTR_7g114080 | 36.691 | 139 | 69 | 2 | 163 | 283 | 160 | 297 | 6.18e-22 | 97.4 |
| MS.gene055721.t1 | MTR_1g094610 | 30.942 | 223 | 106 | 7 | 96 | 303 | 57 | 246 | 1.79e-21 | 94.4 |
| MS.gene055721.t1 | MTR_4g021795 | 29.435 | 248 | 121 | 10 | 84 | 307 | 46 | 263 | 4.50e-21 | 93.6 |
| MS.gene055721.t1 | MTR_7g114080 | 35.135 | 148 | 68 | 4 | 163 | 283 | 160 | 306 | 2.88e-20 | 92.8 |
| MS.gene055721.t1 | MTR_5g023230 | 35.256 | 156 | 93 | 2 | 157 | 305 | 142 | 296 | 1.48e-19 | 89.7 |
| MS.gene055721.t1 | MTR_5g023230 | 35.256 | 156 | 93 | 2 | 157 | 305 | 162 | 316 | 1.92e-19 | 89.7 |
| MS.gene055721.t1 | MTR_4g116160 | 29.771 | 262 | 146 | 10 | 93 | 336 | 321 | 562 | 1.26e-18 | 89.0 |
| MS.gene055721.t1 | MTR_4g116160 | 29.771 | 262 | 146 | 10 | 93 | 336 | 148 | 389 | 1.98e-18 | 87.8 |
| MS.gene055721.t1 | MTR_7g114080 | 34.965 | 143 | 65 | 4 | 163 | 278 | 160 | 301 | 5.16e-18 | 85.1 |
| MS.gene055721.t1 | MTR_1g112830 | 29.545 | 220 | 123 | 5 | 93 | 303 | 414 | 610 | 6.34e-18 | 87.0 |
| MS.gene055721.t1 | MTR_4g116160 | 30.846 | 201 | 112 | 8 | 93 | 282 | 321 | 505 | 1.17e-16 | 82.4 |
| MS.gene055721.t1 | MTR_4g092760 | 28.216 | 241 | 128 | 9 | 85 | 303 | 303 | 520 | 1.76e-16 | 82.0 |
| MS.gene055721.t1 | MTR_4g092760 | 32.704 | 159 | 88 | 5 | 163 | 303 | 274 | 431 | 5.27e-16 | 80.5 |
| MS.gene055721.t1 | MTR_7g114080 | 54.237 | 59 | 27 | 0 | 163 | 221 | 160 | 218 | 1.45e-15 | 77.8 |
| MS.gene055721.t1 | MTR_4g023760 | 27.315 | 216 | 136 | 6 | 94 | 302 | 60 | 261 | 1.81e-14 | 74.3 |
| MS.gene055721.t1 | MTR_5g023230 | 41.270 | 63 | 37 | 0 | 159 | 221 | 164 | 226 | 2.73e-13 | 70.1 |
| MS.gene055721.t1 | MTR_7g118050 | 37.113 | 97 | 49 | 2 | 111 | 206 | 83 | 168 | 3.85e-13 | 68.9 |
| MS.gene055721.t1 | MTR_7g118050 | 37.113 | 97 | 49 | 2 | 111 | 206 | 83 | 168 | 4.56e-13 | 70.1 |
| MS.gene055721.t1 | MTR_4g082560 | 30.534 | 131 | 75 | 2 | 164 | 278 | 180 | 310 | 7.34e-13 | 70.9 |
| MS.gene055721.t1 | MTR_5g042870 | 30.534 | 131 | 75 | 3 | 164 | 278 | 180 | 310 | 7.28e-12 | 67.8 |
| MS.gene055721.t1 | MTR_1g085980 | 27.068 | 133 | 81 | 2 | 162 | 278 | 155 | 287 | 2.52e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055721.t1 | AT3G56930 | 62.155 | 362 | 124 | 5 | 19 | 369 | 4 | 363 | 1.66e-165 | 475 |
| MS.gene055721.t1 | AT3G56930 | 57.584 | 356 | 114 | 6 | 19 | 369 | 4 | 327 | 6.55e-144 | 419 |
| MS.gene055721.t1 | AT5G05070 | 54.933 | 375 | 151 | 7 | 25 | 393 | 37 | 399 | 1.71e-140 | 409 |
| MS.gene055721.t1 | AT2G40990 | 54.775 | 356 | 145 | 7 | 1 | 348 | 1 | 348 | 7.06e-128 | 377 |
| MS.gene055721.t1 | AT3G56920 | 51.906 | 341 | 151 | 5 | 18 | 355 | 3 | 333 | 6.98e-120 | 353 |
| MS.gene055721.t1 | AT3G26935 | 49.162 | 358 | 160 | 6 | 13 | 356 | 7 | 356 | 2.50e-115 | 346 |
| MS.gene055721.t1 | AT4G24630 | 43.817 | 372 | 183 | 7 | 24 | 382 | 3 | 361 | 1.06e-108 | 327 |
| MS.gene055721.t1 | AT5G50020 | 50.329 | 304 | 137 | 4 | 25 | 321 | 4 | 300 | 5.28e-108 | 326 |
| MS.gene055721.t1 | AT5G41060 | 48.305 | 354 | 156 | 7 | 9 | 351 | 3 | 340 | 9.20e-108 | 325 |
| MS.gene055721.t1 | AT5G50020 | 50.329 | 304 | 137 | 4 | 25 | 321 | 34 | 330 | 1.39e-107 | 326 |
| MS.gene055721.t1 | AT5G41060 | 49.541 | 327 | 138 | 7 | 36 | 351 | 15 | 325 | 2.87e-101 | 308 |
| MS.gene055721.t1 | AT3G48760 | 49.408 | 338 | 146 | 6 | 25 | 351 | 28 | 351 | 6.31e-101 | 310 |
| MS.gene055721.t1 | AT5G50020 | 48.355 | 304 | 136 | 5 | 25 | 321 | 4 | 293 | 1.15e-100 | 307 |
| MS.gene055721.t1 | AT5G41060 | 52.190 | 274 | 108 | 6 | 89 | 351 | 12 | 273 | 6.45e-92 | 282 |
| MS.gene055721.t1 | AT5G41060 | 52.190 | 274 | 108 | 6 | 89 | 351 | 12 | 273 | 6.45e-92 | 282 |
| MS.gene055721.t1 | AT3G04970 | 32.653 | 147 | 73 | 2 | 163 | 283 | 73 | 219 | 3.56e-18 | 85.5 |
| MS.gene055721.t1 | AT3G09320 | 31.746 | 189 | 105 | 7 | 140 | 307 | 69 | 254 | 4.73e-18 | 84.7 |
| MS.gene055721.t1 | AT3G51390 | 35.465 | 172 | 96 | 5 | 142 | 304 | 143 | 308 | 1.29e-17 | 84.3 |
| MS.gene055721.t1 | AT3G51390 | 35.465 | 172 | 96 | 5 | 142 | 304 | 138 | 303 | 1.51e-17 | 84.0 |
| MS.gene055721.t1 | AT3G04970 | 32.653 | 147 | 73 | 2 | 163 | 283 | 160 | 306 | 3.82e-17 | 83.6 |
| MS.gene055721.t1 | AT2G14255 | 31.646 | 158 | 81 | 5 | 163 | 298 | 363 | 515 | 8.30e-17 | 83.2 |
| MS.gene055721.t1 | AT5G04270 | 31.293 | 147 | 92 | 4 | 140 | 280 | 68 | 211 | 8.68e-17 | 80.9 |
| MS.gene055721.t1 | AT3G04970 | 55.932 | 59 | 26 | 0 | 163 | 221 | 160 | 218 | 2.21e-16 | 80.1 |
| MS.gene055721.t1 | AT5G20350 | 28.326 | 233 | 127 | 9 | 92 | 303 | 315 | 528 | 1.55e-15 | 79.3 |
| MS.gene055721.t1 | AT4G22750 | 32.450 | 151 | 92 | 3 | 162 | 305 | 115 | 262 | 1.79e-13 | 71.2 |
| MS.gene055721.t1 | AT1G69420 | 30.534 | 131 | 75 | 2 | 164 | 278 | 164 | 294 | 3.05e-13 | 72.4 |
| MS.gene055721.t1 | AT1G69420 | 30.534 | 131 | 75 | 2 | 164 | 278 | 164 | 294 | 3.05e-13 | 72.4 |
| MS.gene055721.t1 | AT3G60800 | 26.977 | 215 | 127 | 6 | 94 | 289 | 62 | 265 | 3.10e-13 | 70.9 |
| MS.gene055721.t1 | AT3G18620 | 40.789 | 76 | 38 | 2 | 156 | 224 | 141 | 216 | 1.40e-11 | 66.2 |
| MS.gene055721.t1 | AT4G00840 | 48.837 | 43 | 22 | 0 | 164 | 206 | 112 | 154 | 5.28e-11 | 62.8 |
| MS.gene055721.t1 | AT4G00840 | 48.837 | 43 | 22 | 0 | 164 | 206 | 112 | 154 | 9.04e-11 | 63.2 |
Find 114 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCCTCCTCTTGACTTC+TGG | 0.152547 | 7.4:+20047434 | MS.gene055721:CDS |
| CCTTCTATGGAGTGGATTAA+TGG | 0.203993 | 7.4:+20047527 | MS.gene055721:CDS |
| GGGTTCAATTCTTACTATTC+TGG | 0.211772 | 7.4:+20047257 | MS.gene055721:CDS |
| AGGAGTAGAAATTCTCAAAT+TGG | 0.237451 | 7.4:+20046227 | MS.gene055721:CDS |
| CAAGGAGGCTTTATCAAGTT+TGG | 0.260253 | 7.4:+20046288 | MS.gene055721:CDS |
| TATTCCTCCTCTTGACTTCT+GGG | 0.268341 | 7.4:+20047435 | MS.gene055721:CDS |
| TAATATACCTACTCCTTCTA+TGG | 0.276316 | 7.4:+20047514 | MS.gene055721:CDS |
| CTTAGTGATCCCTTATTGTA+TGG | 0.289210 | 7.4:-20048473 | None:intergenic |
| TTTATTTCATCAACAGTAAC+AGG | 0.289773 | 7.4:-20048905 | None:intergenic |
| TTCATTGCTGTCTGGTTTGT+TGG | 0.298614 | 7.4:+20048237 | MS.gene055721:CDS |
| CTATCTCATTTGTACAAATC+AGG | 0.303428 | 7.4:+20048281 | MS.gene055721:CDS |
| GTTACTGTTGATGAAATAAA+TGG | 0.304437 | 7.4:+20048908 | MS.gene055721:CDS |
| TCAAAATTTCGCAGAAGTTC+GGG | 0.308835 | 7.4:-20048686 | None:intergenic |
| AAAAGGGAACCCATACAATA+AGG | 0.310666 | 7.4:+20048463 | MS.gene055721:CDS |
| ATTCATTGAAGCAGGAATAC+TGG | 0.316448 | 7.4:-20048519 | None:intergenic |
| AAGGGATCACTAAGAAATAT+TGG | 0.322000 | 7.4:+20048482 | MS.gene055721:CDS |
| GGAGAAAATTGATGTTGAAA+TGG | 0.325187 | 7.4:+20048628 | MS.gene055721:CDS |
| ATCAAAATTTCGCAGAAGTT+CGG | 0.336374 | 7.4:-20048687 | None:intergenic |
| TTTCGCAGAAGTTCGGGAAT+TGG | 0.339620 | 7.4:-20048680 | None:intergenic |
| AAAATCCCGTCCGCCATATT+CGG | 0.340021 | 7.4:-20048596 | None:intergenic |
| CTGTGACTTCGAATCCAGTA+TGG | 0.341832 | 7.4:-20048868 | None:intergenic |
| GCCTCCTTGGTTTCATATCA+TGG | 0.345991 | 7.4:-20046274 | None:intergenic |
| AATCTTCGATTGCGATACTA+TGG | 0.363590 | 7.4:-20048820 | None:intergenic |
| CAATTGCAGGTGCAGCAATT+AGG | 0.368777 | 7.4:-20047149 | None:intergenic |
| TTGACTTCTGGGAGAGATCC+TGG | 0.384915 | 7.4:+20047446 | MS.gene055721:CDS |
| GAGAAAATTGATGTTGAAAT+GGG | 0.385547 | 7.4:+20048629 | MS.gene055721:CDS |
| CAGAAGTCAAGAGGAGGAAT+AGG | 0.388682 | 7.4:-20047433 | None:intergenic |
| AAAGACATATAGGCACAAAA+TGG | 0.393707 | 7.4:-20048127 | None:intergenic |
| ATTTCTCTGTGGTGGGAGAC+TGG | 0.395795 | 7.4:+20047086 | MS.gene055721:CDS |
| GAATTTCTCGGGATAATTCC+AGG | 0.395988 | 7.4:-20047464 | None:intergenic |
| TTGCTGTCTGGTTTGTTGGT+GGG | 0.396543 | 7.4:+20048241 | MS.gene055721:CDS |
| GGAGTAGAAATTCTCAAATT+GGG | 0.397763 | 7.4:+20046228 | MS.gene055721:CDS |
| TATACTGCTTCATTGCTGTC+TGG | 0.401701 | 7.4:+20048229 | MS.gene055721:CDS |
| TCCGTTTGTAGCTCCCATAC+TGG | 0.403795 | 7.4:+20048854 | MS.gene055721:CDS |
| CCATTAATCCACTCCATAGA+AGG | 0.409197 | 7.4:-20047527 | None:intergenic |
| TTTCCGATCGTTTGTACAGC+AGG | 0.411571 | 7.4:+20048544 | MS.gene055721:CDS |
| TGGTGTCCTGTAGTGATTGT+GGG | 0.411788 | 7.4:+20047237 | MS.gene055721:CDS |
| AGGATGAACATACGATGGTT+GGG | 0.421229 | 7.4:+20048564 | MS.gene055721:CDS |
| AAAGGGAACCCATACAATAA+GGG | 0.423938 | 7.4:+20048464 | MS.gene055721:CDS |
| CAAACTTGATAAAGCCTCCT+TGG | 0.424084 | 7.4:-20046287 | None:intergenic |
| AAGCATGAGAAGGCCAATAA+TGG | 0.431532 | 7.4:+20047201 | MS.gene055721:CDS |
| CATCAACAGTAACAGGCCTT+TGG | 0.433305 | 7.4:-20048898 | None:intergenic |
| TTGATGTTGAAATGGGATCT+AGG | 0.436013 | 7.4:+20048636 | MS.gene055721:CDS |
| TTAACACAAAATGCAATTGC+AGG | 0.437269 | 7.4:-20047162 | None:intergenic |
| GGTCTTCTCCTTCTCGAGGT+GGG | 0.442332 | 7.4:+20046249 | MS.gene055721:CDS |
| CCCTGGGTTGGCCAGTGCAT+TGG | 0.444013 | 7.4:+20047710 | MS.gene055721:CDS |
| TTAGTGATCCCTTATTGTAT+GGG | 0.448014 | 7.4:-20048472 | None:intergenic |
| TTGTACAAATGAGATAGAAA+TGG | 0.448341 | 7.4:-20048275 | None:intergenic |
| ATTCAGAGATTTCTCTGTGG+TGG | 0.449321 | 7.4:+20047078 | MS.gene055721:intron |
| AAGAGAACACAAAGACATAT+AGG | 0.450100 | 7.4:-20048137 | None:intergenic |
| TCTGGAGGTGTTGAATTTCT+CGG | 0.454032 | 7.4:-20047476 | None:intergenic |
| TCCAATGCACTGGCCAACCC+AGG | 0.454039 | 7.4:-20047711 | None:intergenic |
| CGGAAATTATTCATTGAAGC+AGG | 0.460924 | 7.4:-20048527 | None:intergenic |
| CTGGAGGTGTTGAATTTCTC+GGG | 0.461477 | 7.4:-20047475 | None:intergenic |
| GATTTGATCATCACTGCCCC+TGG | 0.464384 | 7.4:+20047693 | MS.gene055721:CDS |
| ATTGCTGTCTGGTTTGTTGG+TGG | 0.467541 | 7.4:+20048240 | MS.gene055721:CDS |
| AAACTGTAGCAACAGATGTT+CGG | 0.467884 | 7.4:-20048790 | None:intergenic |
| GGCAGTGATGATCAAATCTC+TGG | 0.471201 | 7.4:-20047688 | None:intergenic |
| AGAATTTCTACTCCTAATCA+TGG | 0.474483 | 7.4:-20046219 | None:intergenic |
| GTCTTCTCCTTCTCGAGGTG+GGG | 0.475083 | 7.4:+20046250 | MS.gene055721:CDS |
| ACATGAGTCATTTCTGTCAT+CGG | 0.488603 | 7.4:-20048942 | None:intergenic |
| TTCAGAGATTTCTCTGTGGT+GGG | 0.489294 | 7.4:+20047079 | MS.gene055721:intron |
| GTGGTGGTGCTGCCATGATT+AGG | 0.495235 | 7.4:+20046207 | None:intergenic |
| ACTAAAGATGTACTTGTGAA+TGG | 0.496836 | 7.4:+20047578 | MS.gene055721:CDS |
| GACTTACTCTTCCAATGCAC+TGG | 0.501355 | 7.4:-20047721 | None:intergenic |
| GATCATCACTGCCCCTGGGT+TGG | 0.502356 | 7.4:+20047698 | MS.gene055721:CDS |
| CAGGATGAACATACGATGGT+TGG | 0.506939 | 7.4:+20048563 | MS.gene055721:CDS |
| CTTTATCAAGTTTGGAGGGG+TGG | 0.514074 | 7.4:+20046296 | MS.gene055721:CDS |
| TTAAACGCGTCATCATAGTC+TGG | 0.516699 | 7.4:-20047494 | None:intergenic |
| TCCAGTATGGGAGCTACAAA+CGG | 0.522058 | 7.4:-20048855 | None:intergenic |
| TCTTCCTCAACACTGTAGAA+TGG | 0.522397 | 7.4:-20048752 | None:intergenic |
| CCTCCTTGGTTTCATATCAT+GGG | 0.523702 | 7.4:-20046273 | None:intergenic |
| GGAGGCTTTATCAAGTTTGG+AGG | 0.531163 | 7.4:+20046291 | MS.gene055721:CDS |
| AGACAACTTACGAGAACTTC+CGG | 0.531741 | 7.4:+20048426 | MS.gene055721:intron |
| ATTGAACCCACAATCACTAC+AGG | 0.531854 | 7.4:-20047243 | None:intergenic |
| GGATGAACATACGATGGTTG+GGG | 0.536653 | 7.4:+20048565 | MS.gene055721:CDS |
| TTGGTGTCCTGTAGTGATTG+TGG | 0.545254 | 7.4:+20047236 | MS.gene055721:CDS |
| CCAATGCACTGGCCAACCCA+GGG | 0.545845 | 7.4:-20047710 | None:intergenic |
| ACAAGTACATCTTTAGTTCG+AGG | 0.546361 | 7.4:-20047572 | None:intergenic |
| GGGTCTTCTCCTTCTCGAGG+TGG | 0.550443 | 7.4:+20046248 | MS.gene055721:CDS |
| GAGGCTTTATCAAGTTTGGA+GGG | 0.560368 | 7.4:+20046292 | MS.gene055721:CDS |
| TGACTCCGAATATGGCGGAC+GGG | 0.567397 | 7.4:+20048591 | MS.gene055721:CDS |
| TACCTACTCCTTCTATGGAG+TGG | 0.568209 | 7.4:+20047519 | MS.gene055721:CDS |
| AGAAACAAGGAAGCTACGTC+AGG | 0.568313 | 7.4:-20047117 | None:intergenic |
| ATTTGATCATCACTGCCCCT+GGG | 0.579993 | 7.4:+20047694 | MS.gene055721:CDS |
| TGATCCATTCTACAGTGTTG+AGG | 0.585981 | 7.4:+20048748 | MS.gene055721:CDS |
| AATCTCACATGATTATGTAT+CGG | 0.591027 | 7.4:+20048194 | MS.gene055721:CDS |
| CATCCTGCTGTACAAACGAT+CGG | 0.600230 | 7.4:-20048547 | None:intergenic |
| TGTGACTTCGAATCCAGTAT+GGG | 0.601594 | 7.4:-20048867 | None:intergenic |
| ACATGCTGCAGCGAAACTAT+CGG | 0.601927 | 7.4:+20048076 | MS.gene055721:intron |
| ATTGGGTCTTCTCCTTCTCG+AGG | 0.609836 | 7.4:+20046245 | MS.gene055721:CDS |
| TCTAGGCGTGCGGACGACGG+TGG | 0.612392 | 7.4:+20048653 | MS.gene055721:CDS |
| GGATCTAGGCGTGCGGACGA+CGG | 0.613270 | 7.4:+20048650 | MS.gene055721:CDS |
| GATCTCTCCCAGAAGTCAAG+AGG | 0.619886 | 7.4:-20047442 | None:intergenic |
| TCATGGGCCCCACCTCGAGA+AGG | 0.622315 | 7.4:-20046257 | None:intergenic |
| TCTTAAAGCAAAGCATGAGA+AGG | 0.627068 | 7.4:+20047191 | MS.gene055721:CDS |
| TTGACTCCGAATATGGCGGA+CGG | 0.628645 | 7.4:+20048590 | MS.gene055721:CDS |
| CTCTCCCAGAAGTCAAGAGG+AGG | 0.632631 | 7.4:-20047439 | None:intergenic |
| TGTACTTGTGAATGGTCATA+CGG | 0.637970 | 7.4:+20047586 | MS.gene055721:CDS |
| TTCATTCAGAGATTTCTCTG+TGG | 0.644118 | 7.4:+20047075 | MS.gene055721:intron |
| GGGTTTGACTCCGAATATGG+CGG | 0.656520 | 7.4:+20048586 | MS.gene055721:CDS |
| GATGAACATACGATGGTTGG+GGG | 0.658611 | 7.4:+20048566 | MS.gene055721:CDS |
| TAGGAATGTTGTAAGAAACA+AGG | 0.661120 | 7.4:-20047130 | None:intergenic |
| AAGTCACAGAATCTGACCAA+AGG | 0.663763 | 7.4:+20048882 | MS.gene055721:CDS |
| AGGCTTTATCAAGTTTGGAG+GGG | 0.664522 | 7.4:+20046293 | MS.gene055721:CDS |
| ATCCACTCCATAGAAGGAGT+AGG | 0.669098 | 7.4:-20047521 | None:intergenic |
| CAATGCACTGGCCAACCCAG+GGG | 0.671362 | 7.4:-20047709 | None:intergenic |
| AACGCGTCATCATAGTCTGG+AGG | 0.679478 | 7.4:-20047491 | None:intergenic |
| GGGCCCATGATATGAAACCA+AGG | 0.692194 | 7.4:+20046270 | MS.gene055721:CDS |
| TGAAATGGGATCTAGGCGTG+CGG | 0.733455 | 7.4:+20048643 | MS.gene055721:CDS |
| CCCATGATATGAAACCAAGG+AGG | 0.760492 | 7.4:+20046273 | MS.gene055721:CDS |
| ACAGCAGGATGAACATACGA+TGG | 0.764138 | 7.4:+20048559 | MS.gene055721:CDS |
| GAACAATGAGAAGTACGAGG+CGG | 0.774033 | 7.4:-20047647 | None:intergenic |
| ATAGAACAATGAGAAGTACG+AGG | 0.782052 | 7.4:-20047650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAAACTGATATATA+AGG | + | chr7.4:20047390-20047409 | MS.gene055721:intron | 15.0% |
| !!! | AAGAATATTTTTATGCTATT+TGG | + | chr7.4:20047826-20047845 | MS.gene055721:intron | 15.0% |
| !!! | AGAATATTTTTATGCTATTT+GGG | + | chr7.4:20047827-20047846 | MS.gene055721:intron | 15.0% |
| !!! | ATTTTGTAATTAAACTTTTG+TGG | + | chr7.4:20046773-20046792 | MS.gene055721:intron | 15.0% |
| !!! | TAAAAATTGGTTTTTGTAAA+TGG | + | chr7.4:20046381-20046400 | MS.gene055721:intron | 15.0% |
| !! | AAACAACATATTAACACAAA+AGG | - | chr7.4:20046516-20046535 | None:intergenic | 20.0% |
| !! | ACGTAAAAAAAACTTTCAAA+TGG | - | chr7.4:20046985-20047004 | None:intergenic | 20.0% |
| !! | CTTAATTATGACGTAAAAAT+TGG | + | chr7.4:20046368-20046387 | MS.gene055721:intron | 20.0% |
| !! | GGTATCAATATGATAAAAAA+GGG | + | chr7.4:20048447-20048466 | MS.gene055721:CDS | 20.0% |
| !!! | CTTTTTTATCATATTGATAC+CGG | - | chr7.4:20048448-20048467 | None:intergenic | 20.0% |
| !!! | TAAGTATATGTTTGATTTTG+CGG | + | chr7.4:20046632-20046651 | MS.gene055721:intron | 20.0% |
| !!! | TTTTGATTTTGATAGTTTTG+AGG | + | chr7.4:20048703-20048722 | MS.gene055721:CDS | 20.0% |
| !!! | TTTTTTTTACGTTGTTGTAT+TGG | + | chr7.4:20046993-20047012 | MS.gene055721:intron | 20.0% |
| ! | AAAAAGATGATCACCATTAT+TGG | - | chr7.4:20047217-20047236 | None:intergenic | 25.0% |
| ! | AAAATGAAATGGAGAAGATA+TGG | - | chr7.4:20048033-20048052 | None:intergenic | 25.0% |
| ! | AAATGTCTTCTATGTTTGTT+TGG | + | chr7.4:20047954-20047973 | MS.gene055721:intron | 25.0% |
| ! | AATCTCACATGATTATGTAT+CGG | + | chr7.4:20048194-20048213 | MS.gene055721:CDS | 25.0% |
| ! | AATGAAGGGAACAAAAAAAA+AGG | - | chr7.4:20047061-20047080 | None:intergenic | 25.0% |
| ! | AGTTCTTGTAGAAAATGAAA+TGG | - | chr7.4:20048044-20048063 | None:intergenic | 25.0% |
| ! | CATTTAAATAAACACGAGAA+TGG | - | chr7.4:20046821-20046840 | None:intergenic | 25.0% |
| ! | CGGTATCAATATGATAAAAA+AGG | + | chr7.4:20048446-20048465 | MS.gene055721:CDS | 25.0% |
| ! | GAGAAAATTGATGTTGAAAT+GGG | + | chr7.4:20048629-20048648 | MS.gene055721:CDS | 25.0% |
| ! | TTATCATTGTAAGCAAACAT+CGG | - | chr7.4:20046615-20046634 | None:intergenic | 25.0% |
| ! | TTGTACAAATGAGATAGAAA+TGG | - | chr7.4:20048278-20048297 | None:intergenic | 25.0% |
| ! | TTTATTTCATCAACAGTAAC+AGG | - | chr7.4:20048908-20048927 | None:intergenic | 25.0% |
| !! | GTTACTGTTGATGAAATAAA+TGG | + | chr7.4:20048908-20048927 | MS.gene055721:CDS | 25.0% |
| !! | TTGTTAAGGTAATGATGTTT+TGG | + | chr7.4:20046542-20046561 | MS.gene055721:intron | 25.0% |
| !!! | ATAATGGTGATCATCTTTTT+TGG | + | chr7.4:20047217-20047236 | MS.gene055721:CDS | 25.0% |
| !!! | TGTTGTTTTTCTTGTTGTTA+AGG | + | chr7.4:20046528-20046547 | MS.gene055721:intron | 25.0% |
| AAAGACATATAGGCACAAAA+TGG | - | chr7.4:20048130-20048149 | None:intergenic | 30.0% | |
| AAGAGAACACAAAGACATAT+AGG | - | chr7.4:20048140-20048159 | None:intergenic | 30.0% | |
| AAGGGATCACTAAGAAATAT+TGG | + | chr7.4:20048482-20048501 | MS.gene055721:CDS | 30.0% | |
| ACTAAAGATGTACTTGTGAA+TGG | + | chr7.4:20047578-20047597 | MS.gene055721:CDS | 30.0% | |
| AGGAGTAGAAATTCTCAAAT+TGG | + | chr7.4:20046227-20046246 | MS.gene055721:CDS | 30.0% | |
| ATCAAAATTTCGCAGAAGTT+CGG | - | chr7.4:20048690-20048709 | None:intergenic | 30.0% | |
| CAATAAGACAAAACATGTGA+TGG | - | chr7.4:20048370-20048389 | None:intergenic | 30.0% | |
| CTATCTCATTTGTACAAATC+AGG | + | chr7.4:20048281-20048300 | MS.gene055721:CDS | 30.0% | |
| GAGCAAATATAGCATATCTT+TGG | - | chr7.4:20046709-20046728 | None:intergenic | 30.0% | |
| GGAGAAAATTGATGTTGAAA+TGG | + | chr7.4:20048628-20048647 | MS.gene055721:CDS | 30.0% | |
| GGAGTAGAAATTCTCAAATT+GGG | + | chr7.4:20046228-20046247 | MS.gene055721:CDS | 30.0% | |
| GTAAAATGAGAAACTGTTGA+AGG | - | chr7.4:20047289-20047308 | None:intergenic | 30.0% | |
| TAATATACCTACTCCTTCTA+TGG | + | chr7.4:20047514-20047533 | MS.gene055721:CDS | 30.0% | |
| TAGAAACAGAGATTTGATCA+TGG | + | chr7.4:20047773-20047792 | MS.gene055721:intron | 30.0% | |
| TAGGAATGTTGTAAGAAACA+AGG | - | chr7.4:20047133-20047152 | None:intergenic | 30.0% | |
| TCCATGATATCAAAACATTG+TGG | - | chr7.4:20046850-20046869 | None:intergenic | 30.0% | |
| TTAACACAAAATGCAATTGC+AGG | - | chr7.4:20047165-20047184 | None:intergenic | 30.0% | |
| TTAGTGATCCCTTATTGTAT+GGG | - | chr7.4:20048475-20048494 | None:intergenic | 30.0% | |
| TTTACGTTGTTGTATTGGAT+TGG | + | chr7.4:20046998-20047017 | MS.gene055721:intron | 30.0% | |
| ! | AAATTGGAACACTTTTCTTG+TGG | + | chr7.4:20046894-20046913 | MS.gene055721:intron | 30.0% |
| ! | ATCTTTCGCAGAAAGATTTT+TGG | + | chr7.4:20048166-20048185 | MS.gene055721:CDS | 30.0% |
| ! | CATCACATGTTTTGTCTTAT+TGG | + | chr7.4:20048368-20048387 | MS.gene055721:intron | 30.0% |
| ! | CTTTTTGTTGCATTAACACA+TGG | - | chr7.4:20047809-20047828 | None:intergenic | 30.0% |
| ! | TCAACATCAATTTTCTCCTT+TGG | - | chr7.4:20048626-20048645 | None:intergenic | 30.0% |
| ! | TCTTTCGCAGAAAGATTTTT+GGG | + | chr7.4:20048167-20048186 | MS.gene055721:CDS | 30.0% |
| !! | GAAAAGTGTTCCAATTTAAG+TGG | - | chr7.4:20046891-20046910 | None:intergenic | 30.0% |
| !!! | TCCACAATGTTTTGATATCA+TGG | + | chr7.4:20046846-20046865 | MS.gene055721:intron | 30.0% |
| !!! | TTCGAGGTAGTTTTAAATGA+GGG | - | chr7.4:20047559-20047578 | None:intergenic | 30.0% |
| !!! | TTTGTTTGGCTTGGTTTTAT+TGG | + | chr7.4:20047968-20047987 | MS.gene055721:intron | 30.0% |
| AAAAGGGAACCCATACAATA+AGG | + | chr7.4:20048463-20048482 | MS.gene055721:CDS | 35.0% | |
| AAACTGTAGCAACAGATGTT+CGG | - | chr7.4:20048793-20048812 | None:intergenic | 35.0% | |
| AAAGGGAACCCATACAATAA+GGG | + | chr7.4:20048464-20048483 | MS.gene055721:CDS | 35.0% | |
| AATCTTCGATTGCGATACTA+TGG | - | chr7.4:20048823-20048842 | None:intergenic | 35.0% | |
| AATTACCAACTTCAGTCAAG+AGG | - | chr7.4:20047875-20047894 | None:intergenic | 35.0% | |
| ACAGAGAAATCTCTGAATGA+AGG | - | chr7.4:20047076-20047095 | None:intergenic | 35.0% | |
| ACATGAGTCATTTCTGTCAT+CGG | - | chr7.4:20048945-20048964 | None:intergenic | 35.0% | |
| ATTCATTGAAGCAGGAATAC+TGG | - | chr7.4:20048522-20048541 | None:intergenic | 35.0% | |
| ATTTACCTCTTGACTGAAGT+TGG | + | chr7.4:20047867-20047886 | MS.gene055721:intron | 35.0% | |
| CAGAGAAATCTCTGAATGAA+GGG | - | chr7.4:20047075-20047094 | None:intergenic | 35.0% | |
| CGGAAATTATTCATTGAAGC+AGG | - | chr7.4:20048530-20048549 | None:intergenic | 35.0% | |
| CTTAGTGATCCCTTATTGTA+TGG | - | chr7.4:20048476-20048495 | None:intergenic | 35.0% | |
| GGGTTCAATTCTTACTATTC+TGG | + | chr7.4:20047257-20047276 | MS.gene055721:CDS | 35.0% | |
| TCAAAATTTCGCAGAAGTTC+GGG | - | chr7.4:20048689-20048708 | None:intergenic | 35.0% | |
| TCTTAAAGCAAAGCATGAGA+AGG | + | chr7.4:20047191-20047210 | MS.gene055721:CDS | 35.0% | |
| TCTTCTATGTTTGTTTGGCT+TGG | + | chr7.4:20047959-20047978 | MS.gene055721:intron | 35.0% | |
| TGTACTTGTGAATGGTCATA+CGG | + | chr7.4:20047586-20047605 | MS.gene055721:CDS | 35.0% | |
| TTCATTCAGAGATTTCTCTG+TGG | + | chr7.4:20047075-20047094 | MS.gene055721:intron | 35.0% | |
| TTGATGTTGAAATGGGATCT+AGG | + | chr7.4:20048636-20048655 | MS.gene055721:CDS | 35.0% | |
| TTGCAATAGCAAGCATTAGT+CGG | - | chr7.4:20046751-20046770 | None:intergenic | 35.0% | |
| ! | ACAAGTACATCTTTAGTTCG+AGG | - | chr7.4:20047575-20047594 | None:intergenic | 35.0% |
| ! | ATAACTTTTTGTCATGGCTG+TGG | + | chr7.4:20046937-20046956 | MS.gene055721:intron | 35.0% |
| ! | ATAGAACAATGAGAAGTACG+AGG | - | chr7.4:20047653-20047672 | None:intergenic | 35.0% |
| ! | CGACGAATAACTTTTTGTCA+TGG | + | chr7.4:20046931-20046950 | MS.gene055721:intron | 35.0% |
| !!! | GTTCGAGGTAGTTTTAAATG+AGG | - | chr7.4:20047560-20047579 | None:intergenic | 35.0% |
| !!! | TCGAGGTAGTTTTAAATGAG+GGG | - | chr7.4:20047558-20047577 | None:intergenic | 35.0% |
| !!! | TTTTGATAGTTTTGAGGACG+AGG | + | chr7.4:20048709-20048728 | MS.gene055721:CDS | 35.0% |
| AAGCATGAGAAGGCCAATAA+TGG | + | chr7.4:20047201-20047220 | MS.gene055721:CDS | 40.0% | |
| AAGTCACAGAATCTGACCAA+AGG | + | chr7.4:20048882-20048901 | MS.gene055721:CDS | 40.0% | |
| AGACAACTTACGAGAACTTC+CGG | + | chr7.4:20048426-20048445 | MS.gene055721:intron | 40.0% | |
| AGGATGAACATACGATGGTT+GGG | + | chr7.4:20048564-20048583 | MS.gene055721:CDS | 40.0% | |
| ATAAACACGAGAATGGACGT+AGG | - | chr7.4:20046814-20046833 | None:intergenic | 40.0% | |
| ATTCAGAGATTTCTCTGTGG+TGG | + | chr7.4:20047078-20047097 | MS.gene055721:intron | 40.0% | |
| ATTGAACCCACAATCACTAC+AGG | - | chr7.4:20047246-20047265 | None:intergenic | 40.0% | |
| CAAACTTGATAAAGCCTCCT+TGG | - | chr7.4:20046290-20046309 | None:intergenic | 40.0% | |
| CCATTAATCCACTCCATAGA+AGG | - | chr7.4:20047530-20047549 | None:intergenic | 40.0% | |
| CCTCCTTGGTTTCATATCAT+GGG | - | chr7.4:20046276-20046295 | None:intergenic | 40.0% | |
| GAATTTCTCGGGATAATTCC+AGG | - | chr7.4:20047467-20047486 | None:intergenic | 40.0% | |
| TAAACACGAGAATGGACGTA+GGG | - | chr7.4:20046813-20046832 | None:intergenic | 40.0% | |
| TATAAGGCAAACTCATGTGC+AGG | + | chr7.4:20047406-20047425 | MS.gene055721:intron | 40.0% | |
| TATACTGCTTCATTGCTGTC+TGG | + | chr7.4:20048229-20048248 | MS.gene055721:CDS | 40.0% | |
| TATTCCTCCTCTTGACTTCT+GGG | + | chr7.4:20047435-20047454 | MS.gene055721:CDS | 40.0% | |
| TCTTCCTCAACACTGTAGAA+TGG | - | chr7.4:20048755-20048774 | None:intergenic | 40.0% | |
| TGATCCATTCTACAGTGTTG+AGG | + | chr7.4:20048748-20048767 | MS.gene055721:CDS | 40.0% | |
| TGCTCTAATCGTAAGCTACA+AGG | - | chr7.4:20047357-20047376 | None:intergenic | 40.0% | |
| TGTGACTTCGAATCCAGTAT+GGG | - | chr7.4:20048870-20048889 | None:intergenic | 40.0% | |
| TTAAACGCGTCATCATAGTC+TGG | - | chr7.4:20047497-20047516 | None:intergenic | 40.0% | |
| TTCAGAGATTTCTCTGTGGT+GGG | + | chr7.4:20047079-20047098 | MS.gene055721:intron | 40.0% | |
| TTGATATCATGGAGCTGTTG+AGG | + | chr7.4:20046857-20046876 | MS.gene055721:intron | 40.0% | |
| ! | AGGCTTTATCAAGTTTGGAG+GGG | + | chr7.4:20046293-20046312 | MS.gene055721:CDS | 40.0% |
| ! | CAAGGAGGCTTTATCAAGTT+TGG | + | chr7.4:20046288-20046307 | MS.gene055721:CDS | 40.0% |
| ! | GAGGCTTTATCAAGTTTGGA+GGG | + | chr7.4:20046292-20046311 | MS.gene055721:CDS | 40.0% |
| ! | TTCATTGCTGTCTGGTTTGT+TGG | + | chr7.4:20048237-20048256 | MS.gene055721:CDS | 40.0% |
| !! | CCTTCTATGGAGTGGATTAA+TGG | + | chr7.4:20047527-20047546 | MS.gene055721:CDS | 40.0% |
| !! | TCGCAGAAAGATTTTTGGGA+TGG | + | chr7.4:20048171-20048190 | MS.gene055721:CDS | 40.0% |
| !! | TCTGGAGGTGTTGAATTTCT+CGG | - | chr7.4:20047479-20047498 | None:intergenic | 40.0% |
| !! | TGCATAGCTTCGACTAGTTT+CGG | - | chr7.4:20047311-20047330 | None:intergenic | 40.0% |
| AAAATCCCGTCCGCCATATT+CGG | - | chr7.4:20048599-20048618 | None:intergenic | 45.0% | |
| ACAGCAGGATGAACATACGA+TGG | + | chr7.4:20048559-20048578 | MS.gene055721:CDS | 45.0% | |
| ACATGCTGCAGCGAAACTAT+CGG | + | chr7.4:20048076-20048095 | MS.gene055721:intron | 45.0% | |
| AGAAACAAGGAAGCTACGTC+AGG | - | chr7.4:20047120-20047139 | None:intergenic | 45.0% | |
| ATCCACTCCATAGAAGGAGT+AGG | - | chr7.4:20047524-20047543 | None:intergenic | 45.0% | |
| ATTTGATCATCACTGCCCCT+GGG | + | chr7.4:20047694-20047713 | MS.gene055721:CDS | 45.0% | |
| CAATTGCAGGTGCAGCAATT+AGG | - | chr7.4:20047152-20047171 | None:intergenic | 45.0% | |
| CAGAAGTCAAGAGGAGGAAT+AGG | - | chr7.4:20047436-20047455 | None:intergenic | 45.0% | |
| CAGGATGAACATACGATGGT+TGG | + | chr7.4:20048563-20048582 | MS.gene055721:CDS | 45.0% | |
| CATCAACAGTAACAGGCCTT+TGG | - | chr7.4:20048901-20048920 | None:intergenic | 45.0% | |
| CATCCTGCTGTACAAACGAT+CGG | - | chr7.4:20048550-20048569 | None:intergenic | 45.0% | |
| CCCATGATATGAAACCAAGG+AGG | + | chr7.4:20046273-20046292 | MS.gene055721:CDS | 45.0% | |
| CTATTCCTCCTCTTGACTTC+TGG | + | chr7.4:20047434-20047453 | MS.gene055721:CDS | 45.0% | |
| CTGTGACTTCGAATCCAGTA+TGG | - | chr7.4:20048871-20048890 | None:intergenic | 45.0% | |
| CTTTATCAAGTTTGGAGGGG+TGG | + | chr7.4:20046296-20046315 | MS.gene055721:CDS | 45.0% | |
| GACTTACTCTTCCAATGCAC+TGG | - | chr7.4:20047724-20047743 | None:intergenic | 45.0% | |
| GATGAACATACGATGGTTGG+GGG | + | chr7.4:20048566-20048585 | MS.gene055721:CDS | 45.0% | |
| GCCTCCTTGGTTTCATATCA+TGG | - | chr7.4:20046277-20046296 | None:intergenic | 45.0% | |
| GGAAGTTCTCGTAAGTTGTC+TGG | - | chr7.4:20048427-20048446 | None:intergenic | 45.0% | |
| GGATGAACATACGATGGTTG+GGG | + | chr7.4:20048565-20048584 | MS.gene055721:CDS | 45.0% | |
| GGCAGTGATGATCAAATCTC+TGG | - | chr7.4:20047691-20047710 | None:intergenic | 45.0% | |
| TACCTACTCCTTCTATGGAG+TGG | + | chr7.4:20047519-20047538 | MS.gene055721:CDS | 45.0% | |
| TCCAGTATGGGAGCTACAAA+CGG | - | chr7.4:20048858-20048877 | None:intergenic | 45.0% | |
| TGGTGTCCTGTAGTGATTGT+GGG | + | chr7.4:20047237-20047256 | MS.gene055721:CDS | 45.0% | |
| TTTCCGATCGTTTGTACAGC+AGG | + | chr7.4:20048544-20048563 | MS.gene055721:CDS | 45.0% | |
| TTTCGCAGAAGTTCGGGAAT+TGG | - | chr7.4:20048683-20048702 | None:intergenic | 45.0% | |
| ! | GAACAATGAGAAGTACGAGG+CGG | - | chr7.4:20047650-20047669 | None:intergenic | 45.0% |
| ! | GGAGGCTTTATCAAGTTTGG+AGG | + | chr7.4:20046291-20046310 | MS.gene055721:CDS | 45.0% |
| ! | TGTCATGGCTGTGGACTTTT+AGG | + | chr7.4:20046946-20046965 | MS.gene055721:intron | 45.0% |
| ! | TTGGTGTCCTGTAGTGATTG+TGG | + | chr7.4:20047236-20047255 | MS.gene055721:CDS | 45.0% |
| !! | ATTGCTGTCTGGTTTGTTGG+TGG | + | chr7.4:20048240-20048259 | MS.gene055721:CDS | 45.0% |
| !! | CTGGAGGTGTTGAATTTCTC+GGG | - | chr7.4:20047478-20047497 | None:intergenic | 45.0% |
| !! | GGTACTGGTGCCACTTAAAT+TGG | + | chr7.4:20046878-20046897 | MS.gene055721:intron | 45.0% |
| !! | TTGCTGTCTGGTTTGTTGGT+GGG | + | chr7.4:20048241-20048260 | MS.gene055721:CDS | 45.0% |
| !!! | GATAGTTTTGAGGACGAGGA+GGG | + | chr7.4:20048713-20048732 | MS.gene055721:CDS | 45.0% |
| !!! | TGATAGTTTTGAGGACGAGG+AGG | + | chr7.4:20048712-20048731 | MS.gene055721:CDS | 45.0% |
| AACGCGTCATCATAGTCTGG+AGG | - | chr7.4:20047494-20047513 | None:intergenic | 50.0% | |
| ACGAGAATGGACGTAGGGAA+AGG | - | chr7.4:20046808-20046827 | None:intergenic | 50.0% | |
| ATTGGGTCTTCTCCTTCTCG+AGG | + | chr7.4:20046245-20046264 | MS.gene055721:CDS | 50.0% | |
| CGGTGCGTTCGAATCACTAA+TGG | + | chr7.4:20046652-20046671 | MS.gene055721:intron | 50.0% | |
| GATCTCTCCCAGAAGTCAAG+AGG | - | chr7.4:20047445-20047464 | None:intergenic | 50.0% | |
| GATTTGATCATCACTGCCCC+TGG | + | chr7.4:20047693-20047712 | MS.gene055721:CDS | 50.0% | |
| GGGCCCATGATATGAAACCA+AGG | + | chr7.4:20046270-20046289 | MS.gene055721:CDS | 50.0% | |
| GGGTTTGACTCCGAATATGG+CGG | + | chr7.4:20048586-20048605 | MS.gene055721:CDS | 50.0% | |
| TCATGGAGCTGTTGAGGTAC+TGG | + | chr7.4:20046863-20046882 | MS.gene055721:intron | 50.0% | |
| TCCGTTTGTAGCTCCCATAC+TGG | + | chr7.4:20048854-20048873 | MS.gene055721:CDS | 50.0% | |
| TGAAATGGGATCTAGGCGTG+CGG | + | chr7.4:20048643-20048662 | MS.gene055721:CDS | 50.0% | |
| TGGGGGTTTGACTCCGAATA+TGG | + | chr7.4:20048583-20048602 | MS.gene055721:CDS | 50.0% | |
| ! | ATTTCTCTGTGGTGGGAGAC+TGG | + | chr7.4:20047086-20047105 | MS.gene055721:CDS | 50.0% |
| ! | TTGACTCCGAATATGGCGGA+CGG | + | chr7.4:20048590-20048609 | MS.gene055721:CDS | 50.0% |
| ! | TTGACTTCTGGGAGAGATCC+TGG | + | chr7.4:20047446-20047465 | MS.gene055721:CDS | 50.0% |
| !!! | GGACGGGATTTTGACTCCAA+AGG | + | chr7.4:20048607-20048626 | MS.gene055721:CDS | 50.0% |
| !!! | TGTGGTGGGAGACTGGTTTT+TGG | + | chr7.4:20047093-20047112 | MS.gene055721:CDS | 50.0% |
| CTCTCCCAGAAGTCAAGAGG+AGG | - | chr7.4:20047442-20047461 | None:intergenic | 55.0% | |
| GGTCTTCTCCTTCTCGAGGT+GGG | + | chr7.4:20046249-20046268 | MS.gene055721:CDS | 55.0% | |
| GTCTTCTCCTTCTCGAGGTG+GGG | + | chr7.4:20046250-20046269 | MS.gene055721:CDS | 55.0% | |
| !! | TGACTCCGAATATGGCGGAC+GGG | + | chr7.4:20048591-20048610 | MS.gene055721:CDS | 55.0% |
| GATCATCACTGCCCCTGGGT+TGG | + | chr7.4:20047698-20047717 | MS.gene055721:CDS | 60.0% | |
| GGGTCTTCTCCTTCTCGAGG+TGG | + | chr7.4:20046248-20046267 | MS.gene055721:CDS | 60.0% | |
| ! | CAATGCACTGGCCAACCCAG+GGG | - | chr7.4:20047712-20047731 | None:intergenic | 60.0% |
| ! | CCAATGCACTGGCCAACCCA+GGG | - | chr7.4:20047713-20047732 | None:intergenic | 60.0% |
| ! | TCCAATGCACTGGCCAACCC+AGG | - | chr7.4:20047714-20047733 | None:intergenic | 60.0% |
| GGATCTAGGCGTGCGGACGA+CGG | + | chr7.4:20048650-20048669 | MS.gene055721:CDS | 65.0% | |
| TCATGGGCCCCACCTCGAGA+AGG | - | chr7.4:20046260-20046279 | None:intergenic | 65.0% | |
| !! | CCCTGGGTTGGCCAGTGCAT+TGG | + | chr7.4:20047710-20047729 | MS.gene055721:CDS | 65.0% |
| TCTAGGCGTGCGGACGACGG+TGG | + | chr7.4:20048653-20048672 | MS.gene055721:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 20046221 | 20048967 | 20046221 | ID=MS.gene055721 |
| chr7.4 | mRNA | 20046221 | 20048967 | 20046221 | ID=MS.gene055721.t1;Parent=MS.gene055721 |
| chr7.4 | exon | 20046221 | 20046322 | 20046221 | ID=MS.gene055721.t1.exon1;Parent=MS.gene055721.t1 |
| chr7.4 | CDS | 20046221 | 20046322 | 20046221 | ID=cds.MS.gene055721.t1;Parent=MS.gene055721.t1 |
| chr7.4 | exon | 20047084 | 20047278 | 20047084 | ID=MS.gene055721.t1.exon2;Parent=MS.gene055721.t1 |
| chr7.4 | CDS | 20047084 | 20047278 | 20047084 | ID=cds.MS.gene055721.t1;Parent=MS.gene055721.t1 |
| chr7.4 | exon | 20047428 | 20047736 | 20047428 | ID=MS.gene055721.t1.exon3;Parent=MS.gene055721.t1 |
| chr7.4 | CDS | 20047428 | 20047736 | 20047428 | ID=cds.MS.gene055721.t1;Parent=MS.gene055721.t1 |
| chr7.4 | exon | 20048087 | 20048302 | 20048087 | ID=MS.gene055721.t1.exon4;Parent=MS.gene055721.t1 |
| chr7.4 | CDS | 20048087 | 20048302 | 20048087 | ID=cds.MS.gene055721.t1;Parent=MS.gene055721.t1 |
| chr7.4 | exon | 20048428 | 20048967 | 20048428 | ID=MS.gene055721.t1.exon5;Parent=MS.gene055721.t1 |
| chr7.4 | CDS | 20048428 | 20048967 | 20048428 | ID=cds.MS.gene055721.t1;Parent=MS.gene055721.t1 |
| Gene Sequence |
| Protein sequence |
