Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57382.t1 | AET04735.2 | 99.4 | 1089 | 7 | 0 | 1 | 1089 | 1 | 1089 | 0.00E+00 | 1832 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57382.t1 | Q9FMJ0 | 76.9 | 1122 | 223 | 9 | 1 | 1089 | 3 | 1121 | 0.0e+00 | 1385.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57382.t1 | G7LE13 | 99.4 | 1089 | 7 | 0 | 1 | 1089 | 1 | 1089 | 0.0e+00 | 1832.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049744 | MS.gene57382 | 0.804901 | 1.73E-49 | -1.69E-46 |
MS.gene050213 | MS.gene57382 | 0.807061 | 6.07E-50 | -1.69E-46 |
MS.gene050257 | MS.gene57382 | 0.839452 | 1.57E-57 | -1.69E-46 |
MS.gene050258 | MS.gene57382 | 0.805413 | 1.35E-49 | -1.69E-46 |
MS.gene050348 | MS.gene57382 | 0.850484 | 1.65E-60 | -1.69E-46 |
MS.gene051834 | MS.gene57382 | 0.842847 | 2.01E-58 | -1.69E-46 |
MS.gene051835 | MS.gene57382 | 0.852552 | 4.28E-61 | -1.69E-46 |
MS.gene052609 | MS.gene57382 | 0.807984 | 3.87E-50 | -1.69E-46 |
MS.gene052776 | MS.gene57382 | 0.831379 | 1.73E-55 | -1.69E-46 |
MS.gene053486 | MS.gene57382 | 0.859159 | 5.02E-63 | -1.69E-46 |
MS.gene056035 | MS.gene57382 | 0.808699 | 2.72E-50 | -1.69E-46 |
MS.gene056622 | MS.gene57382 | 0.83384 | 4.23E-56 | -1.69E-46 |
MS.gene060349 | MS.gene57382 | 0.826345 | 2.86E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene57382 | MS.gene55072 | PPI |
MS.gene57382 | MS.gene055394 | PPI |
MS.gene57382 | MS.gene99137 | PPI |
MS.gene57382 | MS.gene065419 | PPI |
MS.gene57382 | MS.gene69853 | PPI |
MS.gene57382 | MS.gene024151 | PPI |
MS.gene57382 | MS.gene033585 | PPI |
MS.gene57382 | MS.gene064882 | PPI |
MS.gene57382 | MS.gene073174 | PPI |
MS.gene57382 | MS.gene037879 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57382.t1 | MTR_8g093570 | 99.449 | 1089 | 6 | 0 | 1 | 1089 | 1 | 1089 | 0.0 | 2226 |
MS.gene57382.t1 | MTR_8g093570 | 99.178 | 852 | 7 | 0 | 1 | 852 | 1 | 852 | 0.0 | 1733 |
MS.gene57382.t1 | MTR_3g096110 | 76.777 | 211 | 45 | 2 | 1 | 209 | 1 | 209 | 1.08e-107 | 339 |
MS.gene57382.t1 | MTR_3g096110 | 82.000 | 100 | 15 | 1 | 838 | 934 | 212 | 311 | 8.94e-44 | 162 |
MS.gene57382.t1 | MTR_3g096100 | 76.923 | 156 | 27 | 1 | 942 | 1088 | 27 | 182 | 6.04e-63 | 212 |
MS.gene57382.t1 | MTR_3g116250 | 42.045 | 264 | 147 | 5 | 827 | 1088 | 1774 | 2033 | 2.12e-53 | 205 |
MS.gene57382.t1 | MTR_5g034120 | 33.603 | 247 | 151 | 6 | 829 | 1072 | 555 | 791 | 1.15e-28 | 124 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57382.t1 | AT5G64070 | 71.745 | 1129 | 269 | 14 | 1 | 1089 | 3 | 1121 | 0.0 | 1561 |
MS.gene57382.t1 | AT5G09350 | 69.893 | 1126 | 288 | 12 | 1 | 1088 | 3 | 1115 | 0.0 | 1533 |
MS.gene57382.t1 | AT5G64070 | 64.286 | 868 | 260 | 14 | 1 | 828 | 3 | 860 | 0.0 | 1057 |
MS.gene57382.t1 | AT1G49340 | 42.045 | 264 | 147 | 5 | 827 | 1088 | 1760 | 2019 | 1.35e-53 | 206 |
MS.gene57382.t1 | AT1G49340 | 42.045 | 264 | 147 | 5 | 827 | 1088 | 1760 | 2019 | 1.35e-53 | 206 |
MS.gene57382.t1 | AT1G49340 | 42.045 | 264 | 147 | 5 | 827 | 1088 | 1767 | 2026 | 1.46e-53 | 206 |
MS.gene57382.t1 | AT1G49340 | 42.045 | 264 | 147 | 5 | 827 | 1088 | 1767 | 2026 | 1.46e-53 | 206 |
MS.gene57382.t1 | AT1G51040 | 40.152 | 264 | 144 | 6 | 827 | 1088 | 272 | 523 | 5.94e-51 | 189 |
MS.gene57382.t1 | AT1G60490 | 32.258 | 248 | 153 | 7 | 829 | 1072 | 561 | 797 | 1.38e-27 | 120 |
Find 251 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATATCATACATATTGATTT+TGG | 0.147588 | 4.2:-9138911 | MS.gene57382:CDS |
GTGAAAATGGTTGGCTTATT+AGG | 0.167216 | 4.2:-9147349 | MS.gene57382:CDS |
AGATTCAGGCTAACAAATTT+TGG | 0.194951 | 4.2:+9142504 | None:intergenic |
GGACATTTCTCTTCAGAATT+AGG | 0.201559 | 4.2:+9146285 | None:intergenic |
AGAAAGAGAATTTCTTTAAA+AGG | 0.204269 | 4.2:-9146596 | MS.gene57382:CDS |
CCCCTTGGGCTTATCCATTA+TGG | 0.212232 | 4.2:-9142617 | MS.gene57382:CDS |
AGCTCACGTGTTAATTTAAA+AGG | 0.213153 | 4.2:+9138842 | None:intergenic |
ATTTATCCCTGAAGAATTTC+CGG | 0.223562 | 4.2:+9146226 | None:intergenic |
TCACTATGTGACACATCTTA+TGG | 0.256714 | 4.2:-9143782 | MS.gene57382:CDS |
TCATCCTCTTCATCAGGTTT+TGG | 0.261617 | 4.2:+9146264 | None:intergenic |
CAACTTATTTCTCACTTCTA+TGG | 0.281782 | 4.2:-9140455 | MS.gene57382:intron |
TAAAGCACCACCTCGGAAAA+AGG | 0.285319 | 4.2:-9142355 | MS.gene57382:CDS |
TGCCTTGTCTGGTGAACTTT+GGG | 0.289925 | 4.2:-9141435 | MS.gene57382:CDS |
CACGGTCTTTGAACAATTTA+CGG | 0.292700 | 4.2:+9146010 | None:intergenic |
ATTCTCTTTCTCAGAGTCTA+AGG | 0.318759 | 4.2:+9146608 | None:intergenic |
GACAAGGCATCACTGGCTTT+GGG | 0.322107 | 4.2:+9141449 | None:intergenic |
GTGTTTCCACTGACAGATTC+AGG | 0.323756 | 4.2:+9142490 | None:intergenic |
GTACGCAAGGCTTCTATATA+CGG | 0.326417 | 4.2:-9141395 | MS.gene57382:CDS |
ACTAGTGATTCTAGTGAAAA+TGG | 0.334740 | 4.2:-9147362 | MS.gene57382:CDS |
TCCTCTTGCATATTATTTCC+CGG | 0.336403 | 4.2:+9146855 | None:intergenic |
ATTAACCCCACCAGGTGAAT+TGG | 0.346612 | 4.2:+9138877 | None:intergenic |
TGATGGGATTAGTAGGATTC+AGG | 0.351589 | 4.2:-9147054 | MS.gene57382:CDS |
AAAGGTTCTTAAGAGATAGT+AGG | 0.351646 | 4.2:-9146578 | MS.gene57382:CDS |
ATTCCCTCCTAACAGGCTAA+TGG | 0.353082 | 4.2:-9141479 | MS.gene57382:intron |
TCTTCTATTGCCACTGTACT+TGG | 0.357360 | 4.2:+9142318 | None:intergenic |
TTAAATATCCTATTCTCATC+AGG | 0.359261 | 4.2:+9146816 | None:intergenic |
TTCTCAAGGTGGAATTCCTT+TGG | 0.363024 | 4.2:-9142670 | MS.gene57382:CDS |
CTGAACTTTCCTTGTTCAAA+AGG | 0.367792 | 4.2:-9146134 | MS.gene57382:CDS |
TGACAGCTGATCCTGGGGTT+AGG | 0.371582 | 4.2:-9142395 | MS.gene57382:CDS |
TGACTTTGACTCAATTTCCC+TGG | 0.372782 | 4.2:+9147391 | None:intergenic |
TGATTGCAGGCAGGAGCATC+TGG | 0.384919 | 4.2:-9140483 | MS.gene57382:CDS |
AGACAAGGCATCACTGGCTT+TGG | 0.386006 | 4.2:+9141448 | None:intergenic |
ACCTCTTGTGCTGTCCATAA+TGG | 0.386469 | 4.2:+9142603 | None:intergenic |
GAGGAACTTTGTCGAGAGTA+TGG | 0.386545 | 4.2:-9139131 | MS.gene57382:CDS |
TTATGTTGGTATCAGGATTC+GGG | 0.388059 | 4.2:-9137912 | MS.gene57382:intron |
TCTTCTTGTTGAGATGTTGC+AGG | 0.395308 | 4.2:-9138522 | MS.gene57382:intron |
ATGCCTTGTCTGGTGAACTT+TGG | 0.395615 | 4.2:-9141436 | MS.gene57382:CDS |
GAGCACAGAACTACCGTATC+TGG | 0.395767 | 4.2:+9139523 | None:intergenic |
TTGAGAAAGCTTCTGAGAAC+TGG | 0.397468 | 4.2:+9142686 | None:intergenic |
AAGCTGTTCTCTTGAATTCT+CGG | 0.398115 | 4.2:-9142882 | MS.gene57382:CDS |
ATCCATCTCAGTTCCGTAAA+GGG | 0.398557 | 4.2:-9143835 | MS.gene57382:CDS |
GAGATGGATTGATCGGTAAT+GGG | 0.400367 | 4.2:+9143849 | None:intergenic |
GAAGTACACAAAACTTCATA+AGG | 0.400506 | 4.2:+9139574 | None:intergenic |
GACTTTGACTCAATTTCCCT+GGG | 0.403873 | 4.2:+9147392 | None:intergenic |
AAGAAGCTGGTCTACCGCTT+TGG | 0.404302 | 4.2:-9139603 | MS.gene57382:CDS |
CAATGCAATCTTAAGCGACT+TGG | 0.405719 | 4.2:+9147124 | None:intergenic |
GTAACAGAGGTTCAGAATAC+TGG | 0.408394 | 4.2:-9143568 | MS.gene57382:CDS |
ATGATAATGATGGGATTAGT+AGG | 0.414622 | 4.2:-9147061 | MS.gene57382:CDS |
AAAGCGGTAGACCAGCTTCT+TGG | 0.414927 | 4.2:+9139605 | None:intergenic |
TTGGCAGCAATGTGTCTCCT+TGG | 0.415569 | 4.2:-9137733 | MS.gene57382:intron |
GCATAACGGGAACCTCCTAT+TGG | 0.419767 | 4.2:-9138945 | MS.gene57382:CDS |
GGACTCCCTTTGAAAGGTGC+TGG | 0.422221 | 4.2:-9141596 | MS.gene57382:CDS |
AGTCATGGTAAGCCCCTTTA+CGG | 0.426797 | 4.2:+9143822 | None:intergenic |
AATTGAAGATTCAGAGCTGC+TGG | 0.427316 | 4.2:-9145980 | MS.gene57382:CDS |
GGTGGAATTCCTTTGGCAAA+TGG | 0.429030 | 4.2:-9142663 | MS.gene57382:CDS |
CGCTGTCTCCTGATGAGAAT+AGG | 0.429211 | 4.2:-9146824 | MS.gene57382:CDS |
ACCTGGGCAAGTTTAAAACT+TGG | 0.430414 | 4.2:+9139348 | None:intergenic |
TTCCCTCCTAACAGGCTAAT+GGG | 0.431477 | 4.2:-9141478 | MS.gene57382:intron |
TGCTATCCAATTCACCTGGT+GGG | 0.431809 | 4.2:-9138883 | MS.gene57382:CDS |
TGAGATGGATTGATCGGTAA+TGG | 0.433249 | 4.2:+9143848 | None:intergenic |
TATGACCTTCTTCGTCCAAT+AGG | 0.433611 | 4.2:+9138930 | None:intergenic |
GCATGATCATGCCGGGGTGC+GGG | 0.436616 | 4.2:-9147273 | MS.gene57382:CDS |
CACTATGTGACACATCTTAT+GGG | 0.437834 | 4.2:-9143781 | MS.gene57382:CDS |
AAAAGGATGGTTTCTTTCAA+AGG | 0.440298 | 4.2:-9146524 | MS.gene57382:CDS |
TTCACGTAAACTTGAGATGT+TGG | 0.440679 | 4.2:+9139401 | None:intergenic |
TAAAGAGTGGAGATGATTGC+AGG | 0.444745 | 4.2:-9140496 | MS.gene57382:CDS |
ACACAAGCCTAGTCCGTCAT+TGG | 0.444938 | 4.2:-9147171 | MS.gene57382:CDS |
ATTCTTCAGGGATAAATTTG+AGG | 0.453710 | 4.2:-9146220 | MS.gene57382:CDS |
AGAGTCTAAGGCATCTTTCT+CGG | 0.453762 | 4.2:+9146620 | None:intergenic |
GTCAATGAAAATAGCAATAA+CGG | 0.454848 | 4.2:-9146072 | MS.gene57382:CDS |
TCAGATTGCAGCTACTTTGA+TGG | 0.455400 | 4.2:-9147024 | MS.gene57382:CDS |
AGGCTCTTCTTCCTCGCCAT+TGG | 0.456515 | 4.2:+9146158 | None:intergenic |
ATGTATACTCTTCCCTTGAC+AGG | 0.460922 | 4.2:-9147233 | MS.gene57382:CDS |
AATTGCCTGAGCAGTCGATC+TGG | 0.462214 | 4.2:+9142554 | None:intergenic |
GGTTAGGTTGGAAGATATTG+AGG | 0.462981 | 4.2:-9142379 | MS.gene57382:CDS |
GTAGTATTGACAGCTGATCC+TGG | 0.464657 | 4.2:-9142402 | MS.gene57382:CDS |
TTTCACTAGAATCACTAGTC+AGG | 0.465454 | 4.2:+9147366 | None:intergenic |
AGCATGATCATGCCGGGGTG+CGG | 0.465575 | 4.2:-9147274 | MS.gene57382:CDS |
ACATCCTATCATTGCTATTA+CGG | 0.468051 | 4.2:+9142577 | None:intergenic |
TCACGTAAACTTGAGATGTT+GGG | 0.471503 | 4.2:+9139402 | None:intergenic |
CCATCTCAGTTTAACAGAAG+AGG | 0.477378 | 4.2:-9137835 | MS.gene57382:intron |
TTCACCAGACAAGGCATCAC+TGG | 0.477760 | 4.2:+9141442 | None:intergenic |
GTCTGTTTCCCACTGGGAAA+GGG | 0.478023 | 4.2:-9142937 | MS.gene57382:CDS |
AGCAGAACATGACAGTGATC+TGG | 0.478274 | 4.2:-9142436 | MS.gene57382:CDS |
ACTTCGATGCATATCATGTA+AGG | 0.479141 | 4.2:+9142850 | None:intergenic |
GCAAAAGGAGAAGCGCCTCT+TGG | 0.479804 | 4.2:-9141617 | MS.gene57382:CDS |
TCTTATCTTCGAATTTCTCC+CGG | 0.481263 | 4.2:+9146343 | None:intergenic |
CCTGGTGTGCTACTTTCTGC+AGG | 0.481921 | 4.2:-9139098 | MS.gene57382:intron |
AGCTGATCCTGGGGTTAGGT+TGG | 0.483412 | 4.2:-9142391 | MS.gene57382:CDS |
TTGTTAACAAGGTGAAAGAT+AGG | 0.483447 | 4.2:-9138967 | MS.gene57382:intron |
ATACGGGAAGTTACCTGGTT+GGG | 0.483646 | 4.2:-9141378 | MS.gene57382:CDS |
TGGTAGGCTGCGGCAGCAAA+AGG | 0.483803 | 4.2:-9141632 | MS.gene57382:intron |
TTAGCAGTAGCCTTGATGCT+TGG | 0.485107 | 4.2:-9137698 | MS.gene57382:CDS |
AAAGTTTATGCCAAGTCCTA+AGG | 0.486629 | 4.2:-9146793 | MS.gene57382:CDS |
AGGTGAAAGATAGGCATAAC+GGG | 0.489483 | 4.2:-9138958 | MS.gene57382:CDS |
AGCTGTTCTCTTGAATTCTC+GGG | 0.490478 | 4.2:-9142881 | MS.gene57382:CDS |
AAAGCCAGTGATGCCTTGTC+TGG | 0.494239 | 4.2:-9141446 | MS.gene57382:CDS |
AACTTTGTCGAGAGTATGGC+AGG | 0.494454 | 4.2:-9139127 | MS.gene57382:CDS |
AGATGACGGTGATTCTGAAA+AGG | 0.499989 | 4.2:-9146733 | MS.gene57382:CDS |
TCTCTTGAATTCTCGGGAGA+AGG | 0.500659 | 4.2:-9142875 | MS.gene57382:CDS |
AAGGTTCTTAAGAGATAGTA+GGG | 0.501654 | 4.2:-9146577 | MS.gene57382:CDS |
CCTCTTCTGTTAAACTGAGA+TGG | 0.503946 | 4.2:+9137835 | None:intergenic |
GAGGGTGTATATGAAGCATC+AGG | 0.504181 | 4.2:-9142459 | MS.gene57382:CDS |
AAATAATCAAAGAACTCGCT+TGG | 0.504543 | 4.2:+9138700 | None:intergenic |
CTTTGCGGCATTGGGGACCC+AGG | 0.505091 | 4.2:+9143893 | None:intergenic |
AGTCTGTTTCCCACTGGGAA+AGG | 0.505160 | 4.2:-9142938 | MS.gene57382:CDS |
AAGAGAACAGCTTCATCTAC+TGG | 0.505823 | 4.2:+9142892 | None:intergenic |
TGTACCGTAATAGCAATGAT+AGG | 0.506838 | 4.2:-9142581 | MS.gene57382:CDS |
ATATAGATTATTGTAAAGAG+TGG | 0.509673 | 4.2:-9140509 | MS.gene57382:intron |
GGAAATAATATGCAAGAGGA+TGG | 0.510987 | 4.2:-9146852 | MS.gene57382:CDS |
TGTACAAGCATGATCATGCC+GGG | 0.511394 | 4.2:-9147280 | MS.gene57382:CDS |
TAGTATTGACAGCTGATCCT+GGG | 0.511525 | 4.2:-9142401 | MS.gene57382:CDS |
AGCAAAGCATCTCTAACCTT+AGG | 0.513775 | 4.2:+9146777 | None:intergenic |
TCCAGGAGTCTGTTTCCCAC+TGG | 0.515754 | 4.2:-9142944 | MS.gene57382:intron |
TGATGAGGAAGAATCTGAAA+AGG | 0.516791 | 4.2:-9146541 | MS.gene57382:CDS |
GGTTTATTTCAAAGTAGTCC+AGG | 0.519923 | 4.2:-9146048 | MS.gene57382:CDS |
CATACTGAACCTCCGAGTGC+TGG | 0.520644 | 4.2:-9146975 | MS.gene57382:CDS |
GAGGATTCTGATGATAATGA+TGG | 0.521082 | 4.2:-9147071 | MS.gene57382:CDS |
GCACTCTTGCGATCTTCAGT+TGG | 0.521171 | 4.2:+9143743 | None:intergenic |
ACGTATACCACCTTTAAAGC+AGG | 0.521536 | 4.2:+9137884 | None:intergenic |
CTTGGCCAGCACCTTTCAAA+GGG | 0.521847 | 4.2:+9141591 | None:intergenic |
TCTATATACGGGAAGTTACC+TGG | 0.522345 | 4.2:-9141383 | MS.gene57382:CDS |
CTCCCAAAGTTCACCAGACA+AGG | 0.523180 | 4.2:+9141433 | None:intergenic |
ACAAGGCATCACTGGCTTTG+GGG | 0.523180 | 4.2:+9141450 | None:intergenic |
TGACACATCTTATGGGTTAG+TGG | 0.523326 | 4.2:-9143774 | MS.gene57382:CDS |
GAATGATTCTGAGGACAAAA+CGG | 0.523740 | 4.2:-9146418 | MS.gene57382:CDS |
AATCCATCTCAGTTCCGTAA+AGG | 0.523781 | 4.2:-9143836 | MS.gene57382:CDS |
GCCCCTTTACGGAACTGAGA+TGG | 0.525443 | 4.2:+9143833 | None:intergenic |
CCAGGAGTCTGTTTCCCACT+GGG | 0.526784 | 4.2:-9142943 | MS.gene57382:intron |
TTGTACAAGCATGATCATGC+CGG | 0.527442 | 4.2:-9147281 | MS.gene57382:CDS |
CCTGCAGAAAGTAGCACACC+AGG | 0.527564 | 4.2:+9139098 | None:intergenic |
GATGTCCAGATCGACTGCTC+AGG | 0.529304 | 4.2:-9142559 | MS.gene57382:CDS |
ATGTCCAAAACCTGATGAAG+AGG | 0.529626 | 4.2:-9146268 | MS.gene57382:CDS |
TCTTGGCCAGCACCTTTCAA+AGG | 0.531025 | 4.2:+9141590 | None:intergenic |
CCTCTTGGACTCCCTTTGAA+AGG | 0.531956 | 4.2:-9141602 | MS.gene57382:CDS |
AACATGACAGTGATCTGGAA+TGG | 0.532257 | 4.2:-9142431 | MS.gene57382:CDS |
GCATCTCTAACCTTAGGACT+TGG | 0.534395 | 4.2:+9146783 | None:intergenic |
AGAAAGTAGAAGCGAAGATG+AGG | 0.535822 | 4.2:-9146493 | MS.gene57382:CDS |
ATAACTCTCAAGCCCTGTCA+AGG | 0.535864 | 4.2:+9147220 | None:intergenic |
GACCTTCTTCGTCCAATAGG+AGG | 0.537264 | 4.2:+9138933 | None:intergenic |
CGGAACTGAGATGGATTGAT+CGG | 0.539725 | 4.2:+9143842 | None:intergenic |
AGTTACCTGGTTGGGACTTG+CGG | 0.540203 | 4.2:-9141370 | MS.gene57382:CDS |
AGATTGCATTGAAAGTGCAT+TGG | 0.540262 | 4.2:-9147112 | MS.gene57382:CDS |
GTGATTCTAGTGAAAATGGT+TGG | 0.541443 | 4.2:-9147358 | MS.gene57382:CDS |
CAGATTGCAGCTACTTTGAT+GGG | 0.541632 | 4.2:-9147023 | MS.gene57382:CDS |
GACGGTGATTCTGAAAAGGA+TGG | 0.542643 | 4.2:-9146729 | MS.gene57382:CDS |
CAGATACATGAGTCATTGCC+TGG | 0.543756 | 4.2:+9142529 | None:intergenic |
GCAGTATGATTATTATCAGA+GGG | 0.545359 | 4.2:-9137667 | MS.gene57382:CDS |
GCACTCGGAGGTTCAGTATG+AGG | 0.545618 | 4.2:+9146978 | None:intergenic |
ACATGACAGTGATCTGGAAT+GGG | 0.546782 | 4.2:-9142430 | MS.gene57382:CDS |
ATTGAAGATTCAGAGCTGCT+GGG | 0.547015 | 4.2:-9145979 | MS.gene57382:CDS |
AGTGGAAACACGGTATAATG+AGG | 0.548562 | 4.2:-9142478 | MS.gene57382:CDS |
CTTTCAAAATTAACCCCACC+AGG | 0.550999 | 4.2:+9138869 | None:intergenic |
TTGAACAAGGAAAGTTCAGA+AGG | 0.551223 | 4.2:+9146138 | None:intergenic |
GTGGAAGATGAAGAGAAAGA+TGG | 0.554836 | 4.2:-9146384 | MS.gene57382:CDS |
AAGGTGAAAGATAGGCATAA+CGG | 0.555281 | 4.2:-9138959 | MS.gene57382:CDS |
TGTCGTCTTCAGGGTGCACA+CGG | 0.556807 | 4.2:+9146106 | None:intergenic |
CATTGAAACAATTCCAGATA+CGG | 0.557273 | 4.2:-9139536 | MS.gene57382:intron |
GAGGAAGAATCTGAAAAGGA+TGG | 0.559190 | 4.2:-9146537 | MS.gene57382:CDS |
GACTGCTCAGGCAATTGACC+AGG | 0.559330 | 4.2:-9142547 | MS.gene57382:CDS |
ATGCTATCCAATTCACCTGG+TGG | 0.559536 | 4.2:-9138884 | MS.gene57382:CDS |
GCCTTGATGCTTGGAGAACA+CGG | 0.559755 | 4.2:-9137689 | MS.gene57382:CDS |
CTCATCAGATTCACAACTGA+GGG | 0.560276 | 4.2:-9141567 | MS.gene57382:intron |
TCAGTATGAGGTCGTATCAA+AGG | 0.562686 | 4.2:+9146990 | None:intergenic |
TACGCAAGGCTTCTATATAC+GGG | 0.562959 | 4.2:-9141394 | MS.gene57382:CDS |
GTTGTGAATCTGATGAGTCT+TGG | 0.565681 | 4.2:+9141573 | None:intergenic |
AAAGAAAGATAGAGTACGCA+AGG | 0.566171 | 4.2:-9141408 | MS.gene57382:CDS |
ATCACAAACTTATCCAATGA+CGG | 0.573446 | 4.2:+9147158 | None:intergenic |
CAAGGCATCACTGGCTTTGG+GGG | 0.575723 | 4.2:+9141451 | None:intergenic |
ATTAACACGTGAGCTTCTTG+AGG | 0.576168 | 4.2:-9138834 | MS.gene57382:intron |
GAACAAACTCCAACGAGTCA+TGG | 0.576648 | 4.2:+9143807 | None:intergenic |
GGCAGTATGATTATTATCAG+AGG | 0.577932 | 4.2:-9137668 | MS.gene57382:CDS |
GATGAAAATGACAAAGACTT+CGG | 0.578623 | 4.2:+9146882 | None:intergenic |
GAGTGGAGATGATTGCAGGC+AGG | 0.580847 | 4.2:-9140492 | MS.gene57382:CDS |
AACCTCCTATTGGACGAAGA+AGG | 0.582161 | 4.2:-9138935 | MS.gene57382:CDS |
GCGGTTACGCAGATGAACCC+AGG | 0.583483 | 4.2:-9147409 | MS.gene57382:CDS |
TCTCAGAAGCTTTCTCAAGG+TGG | 0.584891 | 4.2:-9142681 | MS.gene57382:CDS |
GCCGTGTTCTCCAAGCATCA+AGG | 0.586685 | 4.2:+9137688 | None:intergenic |
ACCTGGTTGGGACTTGCGGT+CGG | 0.587456 | 4.2:-9141366 | MS.gene57382:intron |
ATATCTTCCAACCTAACCCC+AGG | 0.587620 | 4.2:+9142384 | None:intergenic |
AGATGGATTGATCGGTAATG+GGG | 0.587699 | 4.2:+9143850 | None:intergenic |
ACGGTGATTCTGAAAAGGAT+GGG | 0.588120 | 4.2:-9146728 | MS.gene57382:CDS |
GCTATCCAATTCACCTGGTG+GGG | 0.588178 | 4.2:-9138882 | MS.gene57382:CDS |
AAGTACACAAAACTTCATAA+GGG | 0.588591 | 4.2:+9139575 | None:intergenic |
AACTTATCCAATGACGGACT+AGG | 0.592275 | 4.2:+9147164 | None:intergenic |
GGACAGTACTAGAGGTGATG+AGG | 0.592828 | 4.2:-9146556 | MS.gene57382:CDS |
AATCTTCAATTGAACGGTCA+CGG | 0.593996 | 4.2:+9145992 | None:intergenic |
GTCCATAATGGATAAGCCCA+AGG | 0.594733 | 4.2:+9142615 | None:intergenic |
GAGTATGGCAGGATATTCCC+TGG | 0.595927 | 4.2:-9139116 | MS.gene57382:CDS |
TCCATTATGGACAGCACAAG+AGG | 0.599316 | 4.2:-9142604 | MS.gene57382:CDS |
CTTGTCTGGTGAACTTTGGG+AGG | 0.602026 | 4.2:-9141432 | MS.gene57382:CDS |
GGTTATGGATTCTGACGCTG+AGG | 0.602322 | 4.2:-9138728 | MS.gene57382:CDS |
GGGGTCAAAGAGGCAGAAAG+AGG | 0.603341 | 4.2:-9145959 | MS.gene57382:intron |
AGTTCTCAGAAGCTTTCTCA+AGG | 0.604995 | 4.2:-9142684 | MS.gene57382:CDS |
GATGTGTCCTCAAGTTCAGA+AGG | 0.606355 | 4.2:-9146471 | MS.gene57382:CDS |
TCCATCTCAGTTCCGTAAAG+GGG | 0.606691 | 4.2:-9143834 | MS.gene57382:CDS |
TTCATGCTATCCAATTCACC+TGG | 0.607344 | 4.2:-9138887 | MS.gene57382:CDS |
AGTGGCAATAGAAGAAGTGA+AGG | 0.607405 | 4.2:-9142310 | MS.gene57382:intron |
TCGCAAGAGTGCTCTTCAAG+AGG | 0.608480 | 4.2:-9143732 | MS.gene57382:intron |
ACTGAACCTCCGAGTGCTGG+AGG | 0.608815 | 4.2:-9146972 | MS.gene57382:CDS |
CAGAGCTGCTGGGGTCAAAG+AGG | 0.609247 | 4.2:-9145969 | MS.gene57382:CDS |
GGCAAAGGTGATGATGAGCT+CGG | 0.610851 | 4.2:-9146681 | MS.gene57382:CDS |
GATAGTAGGGACAGTACTAG+AGG | 0.616025 | 4.2:-9146564 | MS.gene57382:CDS |
TGTATACTCTTCCCTTGACA+GGG | 0.616083 | 4.2:-9147232 | MS.gene57382:CDS |
ACCGACCGCAAGTCCCAACC+AGG | 0.617466 | 4.2:+9141365 | None:intergenic |
ACCGGGAAATAATATGCAAG+AGG | 0.621704 | 4.2:-9146856 | MS.gene57382:CDS |
TGAATCTGTCAGTGGAAACA+CGG | 0.621890 | 4.2:-9142488 | MS.gene57382:CDS |
TAACTCTCAAGCCCTGTCAA+GGG | 0.621996 | 4.2:+9147221 | None:intergenic |
GCTCTGAATCTTCAATTGAA+CGG | 0.622562 | 4.2:+9145986 | None:intergenic |
ATTGAAGAAGATACTGCCAA+TGG | 0.623152 | 4.2:-9146174 | MS.gene57382:CDS |
TATACGGGAAGTTACCTGGT+TGG | 0.623432 | 4.2:-9141379 | MS.gene57382:CDS |
TGGAATTGTTTCAATGAGAG+CGG | 0.625727 | 4.2:+9139543 | None:intergenic |
TCCATAATGGATAAGCCCAA+GGG | 0.626062 | 4.2:+9142616 | None:intergenic |
CGTATACCACCTTTAAAGCA+GGG | 0.629980 | 4.2:+9137885 | None:intergenic |
TTGCCACTGTACTTGGAACA+CGG | 0.630176 | 4.2:+9142325 | None:intergenic |
CAGCATGCTTGCGACAAGTG+AGG | 0.631589 | 4.2:+9138555 | None:intergenic |
AGAAGATACTGCCAATGGCG+AGG | 0.634359 | 4.2:-9146169 | MS.gene57382:CDS |
GATACATGCCCTTTCCCAGT+GGG | 0.635735 | 4.2:+9142929 | None:intergenic |
TTGAAGATTCAGAGCTGCTG+GGG | 0.639576 | 4.2:-9145978 | MS.gene57382:CDS |
TGTTAGCCTGAATCTGTCAG+TGG | 0.639661 | 4.2:-9142496 | MS.gene57382:CDS |
AGGGGCTTACCATGACTCGT+TGG | 0.641373 | 4.2:-9143816 | MS.gene57382:CDS |
GTTATGGATTCTGACGCTGA+GGG | 0.643796 | 4.2:-9138727 | MS.gene57382:CDS |
AGGATTCTGATGATAATGAT+GGG | 0.643851 | 4.2:-9147070 | MS.gene57382:CDS |
CAGCTACTTTGATGGGTGAG+TGG | 0.644007 | 4.2:-9147016 | MS.gene57382:CDS |
TGACAAAGACTTCGGCGGTG+AGG | 0.645891 | 4.2:+9146890 | None:intergenic |
GGATAGTAAGAATGATTCTG+AGG | 0.647050 | 4.2:-9146427 | MS.gene57382:CDS |
AAAGCGTCTCCATTTGCCAA+AGG | 0.648853 | 4.2:+9142654 | None:intergenic |
AAGTCAGCGGATAAAGATGA+CGG | 0.652675 | 4.2:-9146747 | MS.gene57382:CDS |
GTGGAAACACGGTATAATGA+GGG | 0.653694 | 4.2:-9142477 | MS.gene57382:CDS |
CGGTTACGCAGATGAACCCA+GGG | 0.658304 | 4.2:-9147408 | MS.gene57382:CDS |
AGTATTGACAGCTGATCCTG+GGG | 0.661051 | 4.2:-9142400 | MS.gene57382:CDS |
CCTTTCAAAGGGAGTCCAAG+AGG | 0.663061 | 4.2:+9141602 | None:intergenic |
GATCAATGTACATGTAACAG+AGG | 0.665912 | 4.2:-9143581 | MS.gene57382:CDS |
ACAGAGGTTCAGAATACTGG+AGG | 0.670222 | 4.2:-9143565 | MS.gene57382:intron |
CGGTTATTAGGGTTCGCTCG+CGG | 0.673119 | 4.2:-9147428 | MS.gene57382:CDS |
CTATTCTCATCAGGAGACAG+CGG | 0.673432 | 4.2:+9146825 | None:intergenic |
GCAAAGATAATCCCGCACCC+CGG | 0.673856 | 4.2:+9147262 | None:intergenic |
CGATACATGCCCTTTCCCAG+TGG | 0.674794 | 4.2:+9142928 | None:intergenic |
GCTAATAAGAGAAAGAACCA+AGG | 0.679649 | 4.2:+9137716 | None:intergenic |
TCATAAGGGCGCAGCCAAAG+CGG | 0.681437 | 4.2:+9139589 | None:intergenic |
GAAAATGACAAAGACTTCGG+CGG | 0.687367 | 4.2:+9146885 | None:intergenic |
TTGAGGATAAAGCACCACCT+CGG | 0.687394 | 4.2:-9142362 | MS.gene57382:CDS |
ACTCATCAGATTCACAACTG+AGG | 0.689053 | 4.2:-9141568 | MS.gene57382:CDS |
CCATAATGGATAAGCCCAAG+GGG | 0.695536 | 4.2:+9142617 | None:intergenic |
GTATGAGGTCGTATCAAAGG+CGG | 0.697048 | 4.2:+9146993 | None:intergenic |
AATGAAAATAGCAATAACGG+TGG | 0.702382 | 4.2:-9146069 | MS.gene57382:CDS |
GTACAAGCATGATCATGCCG+GGG | 0.711579 | 4.2:-9147279 | MS.gene57382:CDS |
GATGGATTGATCGGTAATGG+GGG | 0.711741 | 4.2:+9143851 | None:intergenic |
TCGCCGTGTTCCAAGTACAG+TGG | 0.712754 | 4.2:-9142328 | MS.gene57382:CDS |
CTGCAGAAAGTAGCACACCA+GGG | 0.720700 | 4.2:+9139099 | None:intergenic |
CATAATGGATAAGCCCAAGG+GGG | 0.768010 | 4.2:+9142618 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 9137647 | 9147456 | 9137647 | ID=MS.gene57382 |
chr4.2 | mRNA | 9137647 | 9147456 | 9137647 | ID=MS.gene57382.t1;Parent=MS.gene57382 |
chr4.2 | exon | 9145960 | 9147456 | 9145960 | ID=MS.gene57382.t1.exon1;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9145960 | 9147456 | 9145960 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9143733 | 9143921 | 9143733 | ID=MS.gene57382.t1.exon2;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9143733 | 9143921 | 9143733 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9143566 | 9143614 | 9143566 | ID=MS.gene57382.t1.exon3;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9143566 | 9143614 | 9143566 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9142829 | 9142961 | 9142829 | ID=MS.gene57382.t1.exon4;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9142829 | 9142961 | 9142829 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9142311 | 9142725 | 9142311 | ID=MS.gene57382.t1.exon5;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9142311 | 9142725 | 9142311 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9141568 | 9141648 | 9141568 | ID=MS.gene57382.t1.exon6;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9141568 | 9141648 | 9141568 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9141367 | 9141486 | 9141367 | ID=MS.gene57382.t1.exon7;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9141367 | 9141486 | 9141367 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9140456 | 9140525 | 9140456 | ID=MS.gene57382.t1.exon8;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9140456 | 9140525 | 9140456 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9139537 | 9139634 | 9139537 | ID=MS.gene57382.t1.exon9;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9139537 | 9139634 | 9139537 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9139350 | 9139454 | 9139350 | ID=MS.gene57382.t1.exon10;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9139350 | 9139454 | 9139350 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9139099 | 9139152 | 9139099 | ID=MS.gene57382.t1.exon11;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9139099 | 9139152 | 9139099 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9138835 | 9138978 | 9138835 | ID=MS.gene57382.t1.exon12;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9138835 | 9138978 | 9138835 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9138696 | 9138749 | 9138696 | ID=MS.gene57382.t1.exon13;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9138696 | 9138749 | 9138696 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9138523 | 9138597 | 9138523 | ID=MS.gene57382.t1.exon14;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9138523 | 9138597 | 9138523 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9137836 | 9137919 | 9137836 | ID=MS.gene57382.t1.exon15;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9137836 | 9137919 | 9137836 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
chr4.2 | exon | 9137647 | 9137748 | 9137647 | ID=MS.gene57382.t1.exon16;Parent=MS.gene57382.t1 |
chr4.2 | CDS | 9137647 | 9137748 | 9137647 | ID=cds.MS.gene57382.t1;Parent=MS.gene57382.t1 |
Gene Sequence |
Protein sequence |