Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056055.t1 | XP_003591137.1 | 97.9 | 377 | 4 | 1 | 1 | 373 | 9 | 385 | 6.00E-212 | 746.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056055.t1 | Q93VB2 | 77.8 | 351 | 76 | 1 | 23 | 373 | 77 | 425 | 2.0e-160 | 566.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056055.t1 | G7I8N8 | 97.9 | 377 | 4 | 1 | 1 | 373 | 9 | 385 | 4.3e-212 | 746.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056055 | MS.gene049425 | PPI |
| MS.gene056055 | MS.gene013452 | PPI |
| MS.gene002071 | MS.gene056055 | PPI |
| MS.gene056055 | MS.gene047175 | PPI |
| MS.gene056055 | MS.gene00645 | PPI |
| MS.gene056055 | MS.gene06556 | PPI |
| MS.gene072034 | MS.gene056055 | PPI |
| MS.gene056055 | MS.gene06798 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056055.t1 | MTR_1g083230 | 97.878 | 377 | 4 | 1 | 1 | 373 | 9 | 385 | 0.0 | 765 |
| MS.gene056055.t1 | MTR_7g108520 | 73.926 | 349 | 80 | 4 | 29 | 370 | 71 | 415 | 0.0 | 520 |
| MS.gene056055.t1 | MTR_7g108520 | 73.926 | 349 | 80 | 4 | 29 | 370 | 71 | 415 | 0.0 | 520 |
| MS.gene056055.t1 | MTR_3g093590 | 63.462 | 364 | 114 | 4 | 22 | 368 | 53 | 414 | 9.05e-164 | 465 |
| MS.gene056055.t1 | MTR_1g088855 | 62.000 | 350 | 128 | 2 | 25 | 370 | 4 | 352 | 1.46e-153 | 436 |
| MS.gene056055.t1 | MTR_7g108520 | 79.098 | 244 | 50 | 1 | 29 | 272 | 71 | 313 | 4.64e-142 | 407 |
| MS.gene056055.t1 | MTR_4g130190 | 32.567 | 261 | 164 | 5 | 24 | 279 | 15 | 268 | 2.44e-39 | 141 |
| MS.gene056055.t1 | MTR_4g130190 | 32.707 | 266 | 167 | 5 | 24 | 284 | 15 | 273 | 3.43e-39 | 143 |
| MS.gene056055.t1 | MTR_4g130190 | 32.707 | 266 | 167 | 5 | 24 | 284 | 15 | 273 | 4.72e-39 | 142 |
| MS.gene056055.t1 | MTR_4g130190 | 31.507 | 219 | 141 | 4 | 71 | 284 | 1 | 215 | 7.52e-27 | 108 |
| MS.gene056055.t1 | MTR_4g130190 | 31.507 | 219 | 141 | 4 | 71 | 284 | 1 | 215 | 1.35e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056055.t1 | AT3G62770 | 75.405 | 370 | 88 | 2 | 5 | 373 | 58 | 425 | 0.0 | 572 |
| MS.gene056055.t1 | AT3G62770 | 75.882 | 340 | 79 | 2 | 5 | 343 | 58 | 395 | 0.0 | 525 |
| MS.gene056055.t1 | AT2G40810 | 59.416 | 377 | 134 | 5 | 9 | 368 | 14 | 388 | 6.96e-161 | 457 |
| MS.gene056055.t1 | AT2G40810 | 59.416 | 377 | 134 | 5 | 9 | 368 | 14 | 388 | 6.96e-161 | 457 |
| MS.gene056055.t1 | AT3G56440 | 61.003 | 359 | 126 | 4 | 22 | 370 | 34 | 388 | 1.13e-160 | 456 |
| MS.gene056055.t1 | AT3G56440 | 60.542 | 332 | 117 | 4 | 22 | 343 | 34 | 361 | 2.63e-145 | 416 |
| MS.gene056055.t1 | AT3G56440 | 59.794 | 291 | 104 | 3 | 22 | 302 | 34 | 321 | 1.42e-125 | 365 |
| MS.gene056055.t1 | AT5G05150 | 48.148 | 351 | 163 | 5 | 24 | 372 | 33 | 366 | 1.70e-109 | 325 |
| MS.gene056055.t1 | AT2G40810 | 56.805 | 169 | 58 | 3 | 214 | 368 | 96 | 263 | 1.19e-57 | 189 |
| MS.gene056055.t1 | AT2G40810 | 47.312 | 93 | 45 | 2 | 9 | 98 | 14 | 105 | 4.56e-20 | 89.4 |
| MS.gene056055.t1 | AT4G30510 | 31.395 | 258 | 166 | 5 | 18 | 270 | 8 | 259 | 4.82e-32 | 124 |
| MS.gene056055.t1 | AT4G30510 | 32.195 | 205 | 134 | 3 | 71 | 270 | 1 | 205 | 2.37e-25 | 104 |
Find 117 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGCAGAAGGGTCAAATT+AGG | 0.220681 | 1.1:+61544247 | MS.gene056055:CDS |
| GTCCCAAATCATCACCTTAT+TGG | 0.233471 | 1.1:-61544007 | None:intergenic |
| GCTCCAAAGGGACTCTTGTT+AGG | 0.259047 | 1.1:+61544373 | MS.gene056055:CDS |
| ATGTGAAGTTTCACATGTTT+CGG | 0.262218 | 1.1:+61544200 | MS.gene056055:CDS |
| AGAATGTCTCTTCTGGCTTT+AGG | 0.269846 | 1.1:-61546949 | None:intergenic |
| TTTGGTCCCGGCGGCGGAAT+TGG | 0.275340 | 1.1:+61543913 | MS.gene056055:CDS |
| AGGACGTTGGAGGTAGGATT+TGG | 0.279635 | 1.1:-61543787 | None:intergenic |
| CGATAGAATCGTCGTTGTTT+TGG | 0.280713 | 1.1:+61544098 | MS.gene056055:CDS |
| GGACGTTGGAGGTAGGATTT+GGG | 0.280718 | 1.1:-61543786 | None:intergenic |
| TGTGAAGTTTCACATGTTTC+GGG | 0.284835 | 1.1:+61544201 | MS.gene056055:CDS |
| GAGGTAGGATTTGGGGAAGT+TGG | 0.307680 | 1.1:-61543778 | None:intergenic |
| TTCACATGTTTCGGGAACTA+TGG | 0.320785 | 1.1:+61544209 | MS.gene056055:CDS |
| AAGGTTGATTCGGGATTGTT+GGG | 0.324856 | 1.1:+61545354 | MS.gene056055:CDS |
| CAGCCAATAAGGTGATGATT+TGG | 0.335450 | 1.1:+61544004 | MS.gene056055:CDS |
| GGATTTGGGGAAGTTGGAAT+TGG | 0.338262 | 1.1:-61543772 | None:intergenic |
| TGTTTCGGGAACTATGGTTT+TGG | 0.343715 | 1.1:+61544215 | MS.gene056055:CDS |
| CCCACGCTATCCAGCCAATA+AGG | 0.343990 | 1.1:+61543993 | MS.gene056055:CDS |
| TCGTCTCTTTCATTTATTAG+AGG | 0.349163 | 1.1:+61545432 | MS.gene056055:CDS |
| GATTTGGGGAAGTTGGAATT+GGG | 0.355477 | 1.1:-61543771 | None:intergenic |
| GAAGGTTGATTCGGGATTGT+TGG | 0.356073 | 1.1:+61545353 | MS.gene056055:CDS |
| TTTGCCGCCGGCACCGATCA+TGG | 0.367511 | 1.1:+61543841 | MS.gene056055:CDS |
| TTCAACCTGAAGGTTGATTC+GGG | 0.377452 | 1.1:+61545345 | MS.gene056055:CDS |
| TCATACTAGAATGTCTCTTC+TGG | 0.391067 | 1.1:-61546956 | None:intergenic |
| CTTCAACCTGAAGGTTGATT+CGG | 0.394087 | 1.1:+61545344 | MS.gene056055:CDS |
| GTTGCAGAAGGGTCAAATTA+GGG | 0.396959 | 1.1:+61544248 | MS.gene056055:CDS |
| AACCCTAACAAGAGTCCCTT+TGG | 0.416142 | 1.1:-61544376 | None:intergenic |
| GGCTTGTCCTGGGTTGCAGA+AGG | 0.416417 | 1.1:+61544236 | MS.gene056055:CDS |
| GGAAGTTGGAATTGGGGTTG+AGG | 0.417719 | 1.1:-61543764 | None:intergenic |
| CTCCAAAGGGACTCTTGTTA+GGG | 0.426131 | 1.1:+61544374 | MS.gene056055:CDS |
| GGTTGAGGATGGTGATTCTT+CGG | 0.429172 | 1.1:-61543749 | None:intergenic |
| AGCCAATAAGGTGATGATTT+GGG | 0.436245 | 1.1:+61544005 | MS.gene056055:CDS |
| CGGAGAGTTGTCGTTTCGTT+CGG | 0.437248 | 1.1:+61544050 | MS.gene056055:CDS |
| AGCAAGCAAACGACCATCTT+GGG | 0.438730 | 1.1:-61544343 | None:intergenic |
| ACAATCCCGAATCAACCTTC+AGG | 0.441849 | 1.1:-61545350 | None:intergenic |
| TAAGAGAACTAAGTTCATAA+TGG | 0.444385 | 1.1:+61544287 | MS.gene056055:CDS |
| TTACAATATCATGTTGCCTT+CGG | 0.456525 | 1.1:+61545714 | MS.gene056055:CDS |
| ACCTTATTGGCTGGATAGCG+TGG | 0.456909 | 1.1:-61543994 | None:intergenic |
| TAGCAAGCAAACGACCATCT+TGG | 0.463630 | 1.1:-61544344 | None:intergenic |
| CTTGCTACTGCAAGCTCCAA+AGG | 0.465454 | 1.1:+61544360 | MS.gene056055:CDS |
| CGGCAAAGCAGCCGGAGTCC+TGG | 0.467181 | 1.1:-61543825 | None:intergenic |
| GTTGGAATTGGGGTTGAGGA+TGG | 0.469395 | 1.1:-61543760 | None:intergenic |
| CAAATCATCACCTTATTGGC+TGG | 0.472373 | 1.1:-61544003 | None:intergenic |
| GAAACTATTGCTAACCCTAC+GGG | 0.472592 | 1.1:+61544174 | MS.gene056055:CDS |
| GACTAAGCCAATTCCGCCGC+CGG | 0.485684 | 1.1:-61543920 | None:intergenic |
| TACAATTGTAATACTTGGCA+TGG | 0.487686 | 1.1:+61545749 | MS.gene056055:CDS |
| CGGAGTCCTGGTTGAAGGAT+AGG | 0.489221 | 1.1:-61543813 | None:intergenic |
| TGCAATATCCTCGCTTTCGT+CGG | 0.492313 | 1.1:+61543958 | MS.gene056055:CDS |
| GGATGGTTCTTTGCTTCAAG+AGG | 0.496036 | 1.1:+61544410 | MS.gene056055:CDS |
| TCGTTTCGTTCGGAGGTGAA+AGG | 0.497763 | 1.1:+61544060 | MS.gene056055:CDS |
| ATTTGACCCTTCTGCAACCC+AGG | 0.497963 | 1.1:-61544243 | None:intergenic |
| GAAGCCGCCGACGGGCTAGT+AGG | 0.498221 | 1.1:-61545411 | None:intergenic |
| TAATACTTGGCATGGATGGC+AGG | 0.502259 | 1.1:+61545757 | MS.gene056055:CDS |
| GGTGCCGGCGGCAAAGCAGC+CGG | 0.502398 | 1.1:-61543833 | None:intergenic |
| GGATAGGTGGAGGACGTTGG+AGG | 0.513566 | 1.1:-61543797 | None:intergenic |
| GATCATCAATCACGGTGTAT+CGG | 0.516564 | 1.1:+61544030 | MS.gene056055:CDS |
| GCAGCCGGAGTCCTGGTTGA+AGG | 0.517004 | 1.1:-61543818 | None:intergenic |
| AGGTGGAGGACGTTGGAGGT+AGG | 0.517014 | 1.1:-61543793 | None:intergenic |
| GGCGGAAAATTTCGCGGAAG+GGG | 0.519716 | 1.1:-61543885 | None:intergenic |
| GCGGAAGCCATGATCGGTGC+CGG | 0.522383 | 1.1:-61543848 | None:intergenic |
| GCTTGTCCTGGGTTGCAGAA+GGG | 0.523856 | 1.1:+61544237 | MS.gene056055:CDS |
| GAAGGATAGGTGGAGGACGT+TGG | 0.528553 | 1.1:-61543800 | None:intergenic |
| TGTCAATTTGACACTGCAAC+TGG | 0.532622 | 1.1:+61546893 | MS.gene056055:CDS |
| ATTGTAATACTTGGCATGGA+TGG | 0.536767 | 1.1:+61545753 | MS.gene056055:CDS |
| ATCCTCGCTTTCGTCGGTGG+CGG | 0.540583 | 1.1:+61543964 | MS.gene056055:CDS |
| CACTCTGAGCTAAAATACTT+AGG | 0.547800 | 1.1:-61545660 | None:intergenic |
| ATTTGGGGAAGTTGGAATTG+GGG | 0.548311 | 1.1:-61543770 | None:intergenic |
| AGAGTTGTCGTTTCGTTCGG+AGG | 0.554459 | 1.1:+61544053 | MS.gene056055:CDS |
| GACTCCGGCTGCTTTGCCGC+CGG | 0.557421 | 1.1:+61543829 | MS.gene056055:CDS |
| TGAAACTATTGCTAACCCTA+CGG | 0.562131 | 1.1:+61544173 | MS.gene056055:CDS |
| GCTCAATTTCGCTTGCAAGA+AGG | 0.566558 | 1.1:+61545690 | MS.gene056055:CDS |
| TTGCTACTGCAAGCTCCAAA+GGG | 0.566940 | 1.1:+61544361 | MS.gene056055:CDS |
| AATATCCTCGCTTTCGTCGG+TGG | 0.568451 | 1.1:+61543961 | MS.gene056055:CDS |
| CCACTGTGCAGTGGAAGAGA+AGG | 0.569859 | 1.1:-61545286 | None:intergenic |
| AAAGAGACGAAGCCGCCGAC+GGG | 0.573302 | 1.1:-61545419 | None:intergenic |
| CGGCGGAAAATTTCGCGGAA+GGG | 0.574148 | 1.1:-61543886 | None:intergenic |
| GAAGGCGAGGCTATATATCT+CGG | 0.578334 | 1.1:-61545268 | None:intergenic |
| ACTAAGCCAATTCCGCCGCC+GGG | 0.583325 | 1.1:-61543919 | None:intergenic |
| GCGGCGGAAAATTTCGCGGA+AGG | 0.583883 | 1.1:-61543887 | None:intergenic |
| CGTTCATGTCTTCAACCTGA+AGG | 0.584539 | 1.1:+61545335 | MS.gene056055:CDS |
| CGCCGCCGGGACCAAAATCG+CGG | 0.587933 | 1.1:-61543906 | None:intergenic |
| GAAAGAGACGAAGCCGCCGA+CGG | 0.591104 | 1.1:-61545420 | None:intergenic |
| AATCGCGGCGGAAAATTTCG+CGG | 0.597246 | 1.1:-61543891 | None:intergenic |
| GAAACTTCACATAGCCCCGT+AGG | 0.599056 | 1.1:-61544189 | None:intergenic |
| ATTTGACACTGCAACTGGTG+GGG | 0.602166 | 1.1:+61546898 | MS.gene056055:CDS |
| GACGTTGGAGGTAGGATTTG+GGG | 0.604618 | 1.1:-61543785 | None:intergenic |
| AGGTTGATTCGGGATTGTTG+GGG | 0.605401 | 1.1:+61545355 | MS.gene056055:CDS |
| CCTGGTTGAAGGATAGGTGG+AGG | 0.605827 | 1.1:-61543807 | None:intergenic |
| GACAGCTAACCACTGTGCAG+TGG | 0.609111 | 1.1:-61545295 | None:intergenic |
| ATCCGCCACCGACGAAAGCG+AGG | 0.611040 | 1.1:-61543966 | None:intergenic |
| GTTAGCTGTCTCGAGTGACA+AGG | 0.613865 | 1.1:+61545308 | MS.gene056055:CDS |
| GAAGCCATGATCGGTGCCGG+CGG | 0.615093 | 1.1:-61543845 | None:intergenic |
| TATTGCAGCGGAAGAGCATG+TGG | 0.617070 | 1.1:-61543942 | None:intergenic |
| CAATTTGACACTGCAACTGG+TGG | 0.617442 | 1.1:+61546896 | MS.gene056055:CDS |
| TTGAAGCAAAGAACCATCCA+AGG | 0.620125 | 1.1:-61544406 | None:intergenic |
| CGAGGCTATATATCTCGGCT+CGG | 0.620501 | 1.1:-61545263 | None:intergenic |
| AAACTTCACATAGCCCCGTA+GGG | 0.620552 | 1.1:-61544188 | None:intergenic |
| CCTTATTGGCTGGATAGCGT+GGG | 0.620931 | 1.1:-61543993 | None:intergenic |
| AGTCCTGGTTGAAGGATAGG+TGG | 0.628383 | 1.1:-61543810 | None:intergenic |
| GTAGATGCGGAAGCCATGAT+CGG | 0.630967 | 1.1:-61543854 | None:intergenic |
| CTATCCTTCAACCAGGACTC+CGG | 0.636696 | 1.1:+61543814 | MS.gene056055:CDS |
| AGGGGTCACAGTTGTAGATG+CGG | 0.647313 | 1.1:-61543867 | None:intergenic |
| TTGCAAGCGAAATTGAGCCA+CGG | 0.647957 | 1.1:-61545685 | None:intergenic |
| CCTCCACCTATCCTTCAACC+AGG | 0.650019 | 1.1:+61543807 | MS.gene056055:CDS |
| CTTCAGGTTGAAGACATGAA+CGG | 0.653538 | 1.1:-61545334 | None:intergenic |
| CGCCGGGACCAAAATCGCGG+CGG | 0.659958 | 1.1:-61543903 | None:intergenic |
| AATTTGACACTGCAACTGGT+GGG | 0.661297 | 1.1:+61546897 | MS.gene056055:CDS |
| GTGCAGTGGAAGAGAAGGCG+AGG | 0.663052 | 1.1:-61545281 | None:intergenic |
| GTCTAGTCCTACTAGCCCGT+CGG | 0.677510 | 1.1:+61545404 | MS.gene056055:CDS |
| TTTGGGACGATCATCAATCA+CGG | 0.678175 | 1.1:+61544022 | MS.gene056055:CDS |
| TTAGCTGTCTCGAGTGACAA+GGG | 0.678765 | 1.1:+61545309 | MS.gene056055:CDS |
| TAGTCCTACTAGCCCGTCGG+CGG | 0.686994 | 1.1:+61545407 | MS.gene056055:CDS |
| GGTGATTCTTCGGAATCGAG+AGG | 0.689322 | 1.1:-61543739 | None:intergenic |
| CCTTCTCTTCCACTGCACAG+TGG | 0.689510 | 1.1:+61545286 | MS.gene056055:CDS |
| CGAAAGCGAGGATATTGCAG+CGG | 0.695987 | 1.1:-61543954 | None:intergenic |
| CGGGCTAGTAGGACTAGACT+CGG | 0.697845 | 1.1:-61545400 | None:intergenic |
| AAACTATTGCTAACCCTACG+GGG | 0.703947 | 1.1:+61544175 | MS.gene056055:CDS |
| TGATGATATCAGGTACGGAG+AGG | 0.704005 | 1.1:+61545234 | MS.gene056055:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAACAAATATATAAAACT+GGG | + | chr1.1:61546735-61546754 | MS.gene056055:intron | 10.0% |
| !! | TTAAAACAAATATATAAAAC+TGG | + | chr1.1:61546734-61546753 | MS.gene056055:intron | 10.0% |
| !!! | CATGTATTATTTTATTTTTT+TGG | - | chr1.1:61546580-61546599 | None:intergenic | 10.0% |
| !! | AAAAATACAATTGTAATACT+TGG | + | chr1.1:61545744-61545763 | MS.gene056055:CDS | 15.0% |
| !! | AAAACAAATATATAAAACTG+GGG | + | chr1.1:61546736-61546755 | MS.gene056055:intron | 15.0% |
| !! | TAAATTTATAAAAGAATACC+AGG | + | chr1.1:61546187-61546206 | MS.gene056055:intron | 15.0% |
| !! | TATTTAAGTATTAAGTATGA+TGG | - | chr1.1:61544792-61544811 | None:intergenic | 15.0% |
| !!! | AAATTTATTTTTTCTTGATC+AGG | - | chr1.1:61546242-61546261 | None:intergenic | 15.0% |
| !!! | AATTTATTTTTTCTTGATCA+GGG | - | chr1.1:61546241-61546260 | None:intergenic | 15.0% |
| !! | AAAATCTTAAAAAAGACCAT+AGG | + | chr1.1:61546689-61546708 | MS.gene056055:intron | 20.0% |
| !! | AATTAATGAATAACTAACAG+TGG | - | chr1.1:61545471-61545490 | None:intergenic | 20.0% |
| !! | ATTGCTAGAATTAGAAATAT+AGG | + | chr1.1:61544577-61544596 | MS.gene056055:intron | 20.0% |
| !! | CTTAATACTTAAATAACCTT+AGG | + | chr1.1:61544797-61544816 | MS.gene056055:intron | 20.0% |
| !! | GATATTAGAATTATTCACAT+AGG | + | chr1.1:61545852-61545871 | MS.gene056055:intron | 20.0% |
| !! | TGAATGATGATAAATTGATA+TGG | - | chr1.1:61546787-61546806 | None:intergenic | 20.0% |
| !!! | AAAACAACGGTTTTAAAAAA+AGG | + | chr1.1:61544965-61544984 | MS.gene056055:intron | 20.0% |
| !!! | CTTTTTTCTTTTAGAGTTTT+AGG | + | chr1.1:61546063-61546082 | MS.gene056055:intron | 20.0% |
| !!! | TTTAAAACCGTTGTTTTTAA+GGG | - | chr1.1:61544962-61544981 | None:intergenic | 20.0% |
| !!! | TTTTAAAACCGTTGTTTTTA+AGG | - | chr1.1:61544963-61544982 | None:intergenic | 20.0% |
| ! | AAAAAATCAGTGTACAAAGT+AGG | + | chr1.1:61544731-61544750 | MS.gene056055:intron | 25.0% |
| ! | ACATAAAACTGAACTAAAAG+TGG | + | chr1.1:61544850-61544869 | MS.gene056055:intron | 25.0% |
| ! | AGAATTAGAAATATAGGTTG+AGG | + | chr1.1:61544583-61544602 | MS.gene056055:intron | 25.0% |
| ! | ATAAATACACATATGAGCAA+TGG | - | chr1.1:61546144-61546163 | None:intergenic | 25.0% |
| ! | ATTTATGCCCTTAAAAACAA+CGG | + | chr1.1:61544952-61544971 | MS.gene056055:intron | 25.0% |
| ! | CATAAAACTGAACTAAAAGT+GGG | + | chr1.1:61544851-61544870 | MS.gene056055:intron | 25.0% |
| ! | CATTAATTAGTTATCATGTG+TGG | + | chr1.1:61545483-61545502 | MS.gene056055:intron | 25.0% |
| ! | TAAATGAATTAAGGGCAATT+GGG | - | chr1.1:61546329-61546348 | None:intergenic | 25.0% |
| ! | TAAGAGAACTAAGTTCATAA+TGG | + | chr1.1:61544287-61544306 | MS.gene056055:CDS | 25.0% |
| ! | TTAAATGAATTAAGGGCAAT+TGG | - | chr1.1:61546330-61546349 | None:intergenic | 25.0% |
| !! | ATAACATTTTTACCCTTGAA+AGG | + | chr1.1:61544917-61544936 | MS.gene056055:intron | 25.0% |
| !! | TAACATTTTTACCCTTGAAA+GGG | + | chr1.1:61544918-61544937 | MS.gene056055:intron | 25.0% |
| !! | TATGATGAGTTCAATTGTTT+TGG | + | chr1.1:61545196-61545215 | MS.gene056055:intron | 25.0% |
| !!! | GGTTTTAAAAAAAGGATTTG+AGG | + | chr1.1:61544973-61544992 | MS.gene056055:intron | 25.0% |
| !!! | TCTAAAACATCCTAAGTTTT+GGG | + | chr1.1:61546655-61546674 | MS.gene056055:intron | 25.0% |
| !!! | TGTTTGTTAGTTTTGTTACT+AGG | + | chr1.1:61544545-61544564 | MS.gene056055:intron | 25.0% |
| !!! | TTAGTTTTGTTACTAGGATT+TGG | + | chr1.1:61544551-61544570 | MS.gene056055:intron | 25.0% |
| !!! | TTCTAAAACATCCTAAGTTT+TGG | + | chr1.1:61546654-61546673 | MS.gene056055:intron | 25.0% |
| !!! | TTGTTTAGAAATGTTGGTTT+TGG | + | chr1.1:61544627-61544646 | MS.gene056055:intron | 25.0% |
| !!! | TTTGTTTGGTTTGGAAATTA+TGG | + | chr1.1:61545574-61545593 | MS.gene056055:intron | 25.0% |
| !!! | TTTTTTAGTCTTTGCAATAG+TGG | - | chr1.1:61544717-61544736 | None:intergenic | 25.0% |
| AGGAAACAACGAACTAAAAA+AGG | - | chr1.1:61545809-61545828 | None:intergenic | 30.0% | |
| ATGTGAAGTTTCACATGTTT+CGG | + | chr1.1:61544200-61544219 | MS.gene056055:CDS | 30.0% | |
| CATGCTTATAGTTGTTGTAA+AGG | + | chr1.1:61546372-61546391 | MS.gene056055:intron | 30.0% | |
| TAATATCTCTAAGCAACACA+AGG | - | chr1.1:61545839-61545858 | None:intergenic | 30.0% | |
| TACAATTGTAATACTTGGCA+TGG | + | chr1.1:61545749-61545768 | MS.gene056055:CDS | 30.0% | |
| TCGTCTCTTTCATTTATTAG+AGG | + | chr1.1:61545432-61545451 | MS.gene056055:CDS | 30.0% | |
| TTACAATATCATGTTGCCTT+CGG | + | chr1.1:61545714-61545733 | MS.gene056055:CDS | 30.0% | |
| TTATAGTAACCAAGTTGCTT+GGG | + | chr1.1:61546414-61546433 | MS.gene056055:intron | 30.0% | |
| TTATTGTTGTCCCAAAACTT+AGG | - | chr1.1:61546668-61546687 | None:intergenic | 30.0% | |
| ! | TATACCGTCATAGCATTTTA+GGG | - | chr1.1:61544685-61544704 | None:intergenic | 30.0% |
| ! | TGCTGATTGTTTAGAAATGT+TGG | + | chr1.1:61544621-61544640 | MS.gene056055:intron | 30.0% |
| !!! | AATTGTTTTGGAAGACTGAA+TGG | + | chr1.1:61545208-61545227 | MS.gene056055:intron | 30.0% |
| !!! | ATTGTTTTGGAAGACTGAAT+GGG | + | chr1.1:61545209-61545228 | MS.gene056055:intron | 30.0% |
| !!! | CATCAGATGTTTTAATTCTC+GGG | - | chr1.1:61546836-61546855 | None:intergenic | 30.0% |
| !!! | GCATCAGATGTTTTAATTCT+CGG | - | chr1.1:61546837-61546856 | None:intergenic | 30.0% |
| AAAAAGACCATAGGTTTGAG+AGG | + | chr1.1:61546698-61546717 | MS.gene056055:intron | 35.0% | |
| AAAAGACCATAGGTTTGAGA+GGG | + | chr1.1:61546699-61546718 | MS.gene056055:intron | 35.0% | |
| AAAATGCTATGACGGTATAG+TGG | + | chr1.1:61544686-61544705 | MS.gene056055:intron | 35.0% | |
| AAATGCTATGACGGTATAGT+GGG | + | chr1.1:61544687-61544706 | MS.gene056055:intron | 35.0% | |
| AAGCAACACAAGGAAAAAGA+AGG | - | chr1.1:61545829-61545848 | None:intergenic | 35.0% | |
| ACAACGAACTAAAAAAGGCA+TGG | - | chr1.1:61545804-61545823 | None:intergenic | 35.0% | |
| AGCCAATAAGGTGATGATTT+GGG | + | chr1.1:61544005-61544024 | MS.gene056055:CDS | 35.0% | |
| ATTGTAATACTTGGCATGGA+TGG | + | chr1.1:61545753-61545772 | MS.gene056055:CDS | 35.0% | |
| CACTCTGAGCTAAAATACTT+AGG | - | chr1.1:61545663-61545682 | None:intergenic | 35.0% | |
| CATCATACACACAAAACAGA+AGG | - | chr1.1:61545183-61545202 | None:intergenic | 35.0% | |
| CCTACAAAACAGACAGAATT+AGG | - | chr1.1:61545633-61545652 | None:intergenic | 35.0% | |
| CTTATAGTAACCAAGTTGCT+TGG | + | chr1.1:61546413-61546432 | MS.gene056055:intron | 35.0% | |
| GCTATTGACAGCATATATGT+TGG | + | chr1.1:61545143-61545162 | MS.gene056055:intron | 35.0% | |
| TAATCATGCAGCTAGTTGTT+TGG | - | chr1.1:61546114-61546133 | None:intergenic | 35.0% | |
| TGAAACTATTGCTAACCCTA+CGG | + | chr1.1:61544173-61544192 | MS.gene056055:CDS | 35.0% | |
| TGCAACAACAAATGTTGCTA+TGG | - | chr1.1:61545542-61545561 | None:intergenic | 35.0% | |
| TGGGAAGAAGAACAAAACAA+GGG | + | chr1.1:61544870-61544889 | MS.gene056055:intron | 35.0% | |
| TGTGAAGTTTCACATGTTTC+GGG | + | chr1.1:61544201-61544220 | MS.gene056055:CDS | 35.0% | |
| TGTTAAGATAAGACTACCAG+TGG | - | chr1.1:61545992-61546011 | None:intergenic | 35.0% | |
| TTTCTTGATCAGGGATTAGA+GGG | - | chr1.1:61546275-61546294 | None:intergenic | 35.0% | |
| ! | ATACCGTCATAGCATTTTAG+GGG | - | chr1.1:61544684-61544703 | None:intergenic | 35.0% |
| ! | CAGCCTATGTCAATTTTAGA+GGG | - | chr1.1:61545948-61545967 | None:intergenic | 35.0% |
| ! | CCTAATTCTGTCTGTTTTGT+AGG | + | chr1.1:61545630-61545649 | MS.gene056055:intron | 35.0% |
| ! | CTATACCGTCATAGCATTTT+AGG | - | chr1.1:61544686-61544705 | None:intergenic | 35.0% |
| ! | TCAGCCTATGTCAATTTTAG+AGG | - | chr1.1:61545949-61545968 | None:intergenic | 35.0% |
| ! | TGAAAGTGATGTTCTAAACC+TGG | - | chr1.1:61546208-61546227 | None:intergenic | 35.0% |
| ! | TGTATTTTTCTGATGACCGA+AGG | - | chr1.1:61545733-61545752 | None:intergenic | 35.0% |
| ! | TGTTAGGGTTTTCAATACCT+TGG | + | chr1.1:61544389-61544408 | MS.gene056055:CDS | 35.0% |
| ! | TTTTCTTGATCAGGGATAGA+GGG | - | chr1.1:61546233-61546252 | None:intergenic | 35.0% |
| ! | TTTTCTTGATCAGGGATTAG+AGG | - | chr1.1:61546276-61546295 | None:intergenic | 35.0% |
| ! | TTTTTCTTGATCAGGGATAG+AGG | - | chr1.1:61546234-61546253 | None:intergenic | 35.0% |
| !! | CTACCCTCTAAAATTGACAT+AGG | + | chr1.1:61545942-61545961 | MS.gene056055:intron | 35.0% |
| !! | TGTTTTGCTATAACCCAAGA+TGG | + | chr1.1:61544330-61544349 | MS.gene056055:CDS | 35.0% |
| !!! | CTAAGTATTTTAGCTCAGAG+TGG | + | chr1.1:61545661-61545680 | MS.gene056055:CDS | 35.0% |
| !!! | TATTTTTTTGGCTTTCGCAC+CGG | - | chr1.1:61546568-61546587 | None:intergenic | 35.0% |
| AAACTATTGCTAACCCTACG+GGG | + | chr1.1:61544175-61544194 | MS.gene056055:CDS | 40.0% | |
| AAGCTGGAGACAAACAATAG+CGG | - | chr1.1:61545067-61545086 | None:intergenic | 40.0% | |
| AATTCTCGGGAAAAAAGAGC+AGG | - | chr1.1:61546823-61546842 | None:intergenic | 40.0% | |
| AATTTGACACTGCAACTGGT+GGG | + | chr1.1:61546897-61546916 | MS.gene056055:CDS | 40.0% | |
| ACAAACAATAGCGGTTGTTG+CGG | - | chr1.1:61545058-61545077 | None:intergenic | 40.0% | |
| ACCCTTGAAAGGGTTTGAAT+TGG | + | chr1.1:61544928-61544947 | MS.gene056055:intron | 40.0% | |
| ATCATCAAGATTTGTGCCAC+TGG | + | chr1.1:61545973-61545992 | MS.gene056055:intron | 40.0% | |
| ATTTGGGGAAGTTGGAATTG+GGG | - | chr1.1:61543773-61543792 | None:intergenic | 40.0% | |
| CAAATCATCACCTTATTGGC+TGG | - | chr1.1:61544006-61544025 | None:intergenic | 40.0% | |
| CAGCCAATAAGGTGATGATT+TGG | + | chr1.1:61544004-61544023 | MS.gene056055:CDS | 40.0% | |
| GAAACTATTGCTAACCCTAC+GGG | + | chr1.1:61544174-61544193 | MS.gene056055:CDS | 40.0% | |
| GATCATCAATCACGGTGTAT+CGG | + | chr1.1:61544030-61544049 | MS.gene056055:CDS | 40.0% | |
| GATGGCAGGTATTTCAGTAA+TGG | + | chr1.1:61545771-61545790 | MS.gene056055:intron | 40.0% | |
| GATTTGGGGAAGTTGGAATT+GGG | - | chr1.1:61543774-61543793 | None:intergenic | 40.0% | |
| GCCAATTCAAACCCTTTCAA+GGG | - | chr1.1:61544932-61544951 | None:intergenic | 40.0% | |
| GTCCCAAATCATCACCTTAT+TGG | - | chr1.1:61544010-61544029 | None:intergenic | 40.0% | |
| GTGGGAAGAAGAACAAAACA+AGG | + | chr1.1:61544869-61544888 | MS.gene056055:intron | 40.0% | |
| GTTGCAGAAGGGTCAAATTA+GGG | + | chr1.1:61544248-61544267 | MS.gene056055:CDS | 40.0% | |
| GTTGTATTGCTCTGTACCTA+AGG | - | chr1.1:61544816-61544835 | None:intergenic | 40.0% | |
| TCAGTCAGAAACCCTAATAG+TGG | + | chr1.1:61545000-61545019 | MS.gene056055:intron | 40.0% | |
| TCCAAACCAAACAAAACCCT+GGG | - | chr1.1:61545569-61545588 | None:intergenic | 40.0% | |
| TGAATGGGAGTGATGATATC+AGG | + | chr1.1:61545224-61545243 | MS.gene056055:intron | 40.0% | |
| TGCCAATTCAAACCCTTTCA+AGG | - | chr1.1:61544933-61544952 | None:intergenic | 40.0% | |
| TGTCAATTTGACACTGCAAC+TGG | + | chr1.1:61546893-61546912 | MS.gene056055:CDS | 40.0% | |
| TTCACATAGGACTACTAGCA+TGG | + | chr1.1:61545865-61545884 | MS.gene056055:intron | 40.0% | |
| TTCACATGTTTCGGGAACTA+TGG | + | chr1.1:61544209-61544228 | MS.gene056055:CDS | 40.0% | |
| TTCCAAACCAAACAAAACCC+TGG | - | chr1.1:61545570-61545589 | None:intergenic | 40.0% | |
| TTGAAGCAAAGAACCATCCA+AGG | - | chr1.1:61544409-61544428 | None:intergenic | 40.0% | |
| ! | AGGGTTTTCAATACCTTGGA+TGG | + | chr1.1:61544393-61544412 | MS.gene056055:CDS | 40.0% |
| ! | CGATAGAATCGTCGTTGTTT+TGG | + | chr1.1:61544098-61544117 | MS.gene056055:CDS | 40.0% |
| ! | CTTCAACCTGAAGGTTGATT+CGG | + | chr1.1:61545344-61545363 | MS.gene056055:CDS | 40.0% |
| ! | TACCGTCATAGCATTTTAGG+GGG | - | chr1.1:61544683-61544702 | None:intergenic | 40.0% |
| ! | TGTTTCGGGAACTATGGTTT+TGG | + | chr1.1:61544215-61544234 | MS.gene056055:CDS | 40.0% |
| ! | TTCAACCTGAAGGTTGATTC+GGG | + | chr1.1:61545345-61545364 | MS.gene056055:CDS | 40.0% |
| ! | TTTGGGACGATCATCAATCA+CGG | + | chr1.1:61544022-61544041 | MS.gene056055:CDS | 40.0% |
| !! | AAGGTTGATTCGGGATTGTT+GGG | + | chr1.1:61545354-61545373 | MS.gene056055:CDS | 40.0% |
| !! | AATTTTAGAGGGTAGTGCAC+GGG | - | chr1.1:61545937-61545956 | None:intergenic | 40.0% |
| !! | AGAATGTCTCTTCTGGCTTT+AGG | - | chr1.1:61546952-61546971 | None:intergenic | 40.0% |
| !! | CAATTTTAGAGGGTAGTGCA+CGG | - | chr1.1:61545938-61545957 | None:intergenic | 40.0% |
| !! | CTTCAGGTTGAAGACATGAA+CGG | - | chr1.1:61545337-61545356 | None:intergenic | 40.0% |
| AAACTTCACATAGCCCCGTA+GGG | - | chr1.1:61544191-61544210 | None:intergenic | 45.0% | |
| AACCCTAACAAGAGTCCCTT+TGG | - | chr1.1:61544379-61544398 | None:intergenic | 45.0% | |
| AATACCGGGTTCAATTCCCA+GGG | + | chr1.1:61546468-61546487 | MS.gene056055:intron | 45.0% | |
| ACAATCCCGAATCAACCTTC+AGG | - | chr1.1:61545353-61545372 | None:intergenic | 45.0% | |
| ACATAGGACTACTAGCATGG+TGG | + | chr1.1:61545868-61545887 | MS.gene056055:intron | 45.0% | |
| AGCAAGCAAACGACCATCTT+GGG | - | chr1.1:61544346-61544365 | None:intergenic | 45.0% | |
| ATTGTTTGTCTCCAGCTTGC+AGG | + | chr1.1:61545069-61545088 | MS.gene056055:intron | 45.0% | |
| ATTTGACACTGCAACTGGTG+GGG | + | chr1.1:61546898-61546917 | MS.gene056055:CDS | 45.0% | |
| CAATTTGACACTGCAACTGG+TGG | + | chr1.1:61546896-61546915 | MS.gene056055:CDS | 45.0% | |
| CCTAATAGTGGTTGCGATAG+CGG | + | chr1.1:61545012-61545031 | MS.gene056055:intron | 45.0% | |
| CGCTATCGCAACCACTATTA+GGG | - | chr1.1:61545014-61545033 | None:intergenic | 45.0% | |
| CGTTCATGTCTTCAACCTGA+AGG | + | chr1.1:61545335-61545354 | MS.gene056055:CDS | 45.0% | |
| CTCCAAAGGGACTCTTGTTA+GGG | + | chr1.1:61544374-61544393 | MS.gene056055:CDS | 45.0% | |
| CTGTCAATAGCACGCTATAG+CGG | - | chr1.1:61545134-61545153 | None:intergenic | 45.0% | |
| GAAGGCGAGGCTATATATCT+CGG | - | chr1.1:61545271-61545290 | None:intergenic | 45.0% | |
| GCTCAATTTCGCTTGCAAGA+AGG | + | chr1.1:61545690-61545709 | MS.gene056055:CDS | 45.0% | |
| GGATGGTTCTTTGCTTCAAG+AGG | + | chr1.1:61544410-61544429 | MS.gene056055:CDS | 45.0% | |
| GGATTTGGGGAAGTTGGAAT+TGG | - | chr1.1:61543775-61543794 | None:intergenic | 45.0% | |
| GGGAGTGATGATATCAGGTA+CGG | + | chr1.1:61545229-61545248 | MS.gene056055:intron | 45.0% | |
| GGTTGAGGATGGTGATTCTT+CGG | - | chr1.1:61543752-61543771 | None:intergenic | 45.0% | |
| GGTTGCAGAAGGGTCAAATT+AGG | + | chr1.1:61544247-61544266 | MS.gene056055:CDS | 45.0% | |
| TAATACTTGGCATGGATGGC+AGG | + | chr1.1:61545757-61545776 | MS.gene056055:CDS | 45.0% | |
| TAGCAAGCAAACGACCATCT+TGG | - | chr1.1:61544347-61544366 | None:intergenic | 45.0% | |
| TGATGATATCAGGTACGGAG+AGG | + | chr1.1:61545234-61545253 | MS.gene056055:intron | 45.0% | |
| TGCAATATCCTCGCTTTCGT+CGG | + | chr1.1:61543958-61543977 | MS.gene056055:CDS | 45.0% | |
| TGCCCCCTAAAATGCTATGA+CGG | + | chr1.1:61544678-61544697 | MS.gene056055:intron | 45.0% | |
| TTAGCTGTCTCGAGTGACAA+GGG | + | chr1.1:61545309-61545328 | MS.gene056055:CDS | 45.0% | |
| TTGCAAGCGAAATTGAGCCA+CGG | - | chr1.1:61545688-61545707 | None:intergenic | 45.0% | |
| TTGCTACTGCAAGCTCCAAA+GGG | + | chr1.1:61544361-61544380 | MS.gene056055:CDS | 45.0% | |
| ! | GAAATTTTCCGCCGCGATTT+TGG | + | chr1.1:61543895-61543914 | MS.gene056055:CDS | 45.0% |
| !! | AGGTTGATTCGGGATTGTTG+GGG | + | chr1.1:61545355-61545374 | MS.gene056055:CDS | 45.0% |
| !! | ATTTGTTGTTGCATCAGCCC+AGG | + | chr1.1:61545549-61545568 | MS.gene056055:intron | 45.0% |
| !! | GAAGGTTGATTCGGGATTGT+TGG | + | chr1.1:61545353-61545372 | MS.gene056055:CDS | 45.0% |
| !! | TTTGTTGTTGCATCAGCCCA+GGG | + | chr1.1:61545550-61545569 | MS.gene056055:intron | 45.0% |
| !!! | ACTATGGTTTTGGCTTGTCC+TGG | + | chr1.1:61544225-61544244 | MS.gene056055:CDS | 45.0% |
| !!! | CTATGGTTTTGGCTTGTCCT+GGG | + | chr1.1:61544226-61544245 | MS.gene056055:CDS | 45.0% |
| !!! | ATTTTTATTAAATGAATTAA+GGG | - | chr1.1:61546337-61546356 | None:intergenic | 5.0% |
| !!! | TATTTTTATTAAATGAATTA+AGG | - | chr1.1:61546338-61546357 | None:intergenic | 5.0% |
| AATATCCTCGCTTTCGTCGG+TGG | + | chr1.1:61543961-61543980 | MS.gene056055:CDS | 50.0% | |
| AATCGCGGCGGAAAATTTCG+CGG | - | chr1.1:61543894-61543913 | None:intergenic | 50.0% | |
| AGACCATAGGTTTGAGAGGG+AGG | + | chr1.1:61546702-61546721 | MS.gene056055:intron | 50.0% | |
| AGGACGTACACAGGGAATAC+CGG | + | chr1.1:61546453-61546472 | MS.gene056055:intron | 50.0% | |
| AGGACGTTGGAGGTAGGATT+TGG | - | chr1.1:61543790-61543809 | None:intergenic | 50.0% | |
| AGGGGTCACAGTTGTAGATG+CGG | - | chr1.1:61543870-61543889 | None:intergenic | 50.0% | |
| AGTCCTGGTTGAAGGATAGG+TGG | - | chr1.1:61543813-61543832 | None:intergenic | 50.0% | |
| ATACCGGGTTCAATTCCCAG+GGG | + | chr1.1:61546469-61546488 | MS.gene056055:intron | 50.0% | |
| ATCCCTCCCTCTCAAACCTA+TGG | - | chr1.1:61546708-61546727 | None:intergenic | 50.0% | |
| ATTTGACCCTTCTGCAACCC+AGG | - | chr1.1:61544246-61544265 | None:intergenic | 50.0% | |
| ATTTGTCGCCCACCACTGTT+GGG | + | chr1.1:61546535-61546554 | MS.gene056055:intron | 50.0% | |
| CCGCTATCGCAACCACTATT+AGG | - | chr1.1:61545015-61545034 | None:intergenic | 50.0% | |
| CGAAAGCGAGGATATTGCAG+CGG | - | chr1.1:61543957-61543976 | None:intergenic | 50.0% | |
| CGAGGCTATATATCTCGGCT+CGG | - | chr1.1:61545266-61545285 | None:intergenic | 50.0% | |
| CTATCCTTCAACCAGGACTC+CGG | + | chr1.1:61543814-61543833 | MS.gene056055:CDS | 50.0% | |
| CTTGCTACTGCAAGCTCCAA+AGG | + | chr1.1:61544360-61544379 | MS.gene056055:CDS | 50.0% | |
| GAAACTTCACATAGCCCCGT+AGG | - | chr1.1:61544192-61544211 | None:intergenic | 50.0% | |
| GAATACCGGGTTCAATTCCC+AGG | + | chr1.1:61546467-61546486 | MS.gene056055:intron | 50.0% | |
| GACCATAGGTTTGAGAGGGA+GGG | + | chr1.1:61546703-61546722 | MS.gene056055:intron | 50.0% | |
| GACGTTGGAGGTAGGATTTG+GGG | - | chr1.1:61543788-61543807 | None:intergenic | 50.0% | |
| GAGGTAGGATTTGGGGAAGT+TGG | - | chr1.1:61543781-61543800 | None:intergenic | 50.0% | |
| GCTCCAAAGGGACTCTTGTT+AGG | + | chr1.1:61544373-61544392 | MS.gene056055:CDS | 50.0% | |
| GGAAGTTGGAATTGGGGTTG+AGG | - | chr1.1:61543767-61543786 | None:intergenic | 50.0% | |
| GGACGTTGGAGGTAGGATTT+GGG | - | chr1.1:61543789-61543808 | None:intergenic | 50.0% | |
| GGTGATTCTTCGGAATCGAG+AGG | - | chr1.1:61543742-61543761 | None:intergenic | 50.0% | |
| GTAGATGCGGAAGCCATGAT+CGG | - | chr1.1:61543857-61543876 | None:intergenic | 50.0% | |
| GTATTCCCTGTGTACGTCCT+TGG | - | chr1.1:61546453-61546472 | None:intergenic | 50.0% | |
| GTTAGCTGTCTCGAGTGACA+AGG | + | chr1.1:61545308-61545327 | MS.gene056055:CDS | 50.0% | |
| GTTGGAATTGGGGTTGAGGA+TGG | - | chr1.1:61543763-61543782 | None:intergenic | 50.0% | |
| GTTGTTGCGGCTGCTAATTG+CGG | - | chr1.1:61545045-61545064 | None:intergenic | 50.0% | |
| GTTTCCAACCCAACAGTGGT+GGG | - | chr1.1:61546546-61546565 | None:intergenic | 50.0% | |
| TCGTTTCGTTCGGAGGTGAA+AGG | + | chr1.1:61544060-61544079 | MS.gene056055:CDS | 50.0% | |
| TTGTTGCGGCTGCTAATTGC+GGG | - | chr1.1:61545044-61545063 | None:intergenic | 50.0% | |
| ! | ACCTTATTGGCTGGATAGCG+TGG | - | chr1.1:61543997-61544016 | None:intergenic | 50.0% |
| ! | AGAGTTGTCGTTTCGTTCGG+AGG | + | chr1.1:61544053-61544072 | MS.gene056055:CDS | 50.0% |
| ! | AGTGGTTGCGATAGCGGTTT+GGG | + | chr1.1:61545018-61545037 | MS.gene056055:intron | 50.0% |
| ! | CCTTATTGGCTGGATAGCGT+GGG | - | chr1.1:61543996-61544015 | None:intergenic | 50.0% |
| ! | CGGAGAGTTGTCGTTTCGTT+CGG | + | chr1.1:61544050-61544069 | MS.gene056055:CDS | 50.0% |
| ! | GCTATAGCGGAATAGCGTAG+CGG | - | chr1.1:61545121-61545140 | None:intergenic | 50.0% |
| ! | TAGTGGTTGCGATAGCGGTT+TGG | + | chr1.1:61545017-61545036 | MS.gene056055:intron | 50.0% |
| ! | TATTGCAGCGGAAGAGCATG+TGG | - | chr1.1:61543945-61543964 | None:intergenic | 50.0% |
| !! | ACCACTGTTGGGTTGGAAAC+CGG | + | chr1.1:61546546-61546565 | MS.gene056055:intron | 50.0% |
| !! | GTCATAGCATTTTAGGGGGC+AGG | - | chr1.1:61544679-61544698 | None:intergenic | 50.0% |
| !!! | CATCAGCCCAGGGTTTTGTT+TGG | + | chr1.1:61545560-61545579 | MS.gene056055:intron | 50.0% |
| !!! | GCCCAGGGTTTTGTTTGGTT+TGG | + | chr1.1:61545565-61545584 | MS.gene056055:intron | 50.0% |
| !!! | TTTTAGCTCAGAGTGGTCCG+TGG | + | chr1.1:61545668-61545687 | MS.gene056055:CDS | 50.0% |
| CAAATCCGGCTCATGCGTAG+AGG | - | chr1.1:61546520-61546539 | None:intergenic | 55.0% | |
| CCACTAGAGCCCAAGCAACT+TGG | - | chr1.1:61546426-61546445 | None:intergenic | 55.0% | |
| CCACTGTGCAGTGGAAGAGA+AGG | - | chr1.1:61545289-61545308 | None:intergenic | 55.0% | |
| CCCACGCTATCCAGCCAATA+AGG | + | chr1.1:61543993-61544012 | MS.gene056055:CDS | 55.0% | |
| CCTCCACCTATCCTTCAACC+AGG | + | chr1.1:61543807-61543826 | MS.gene056055:CDS | 55.0% | |
| CCTGGTTGAAGGATAGGTGG+AGG | - | chr1.1:61543810-61543829 | None:intergenic | 55.0% | |
| CCTTCTCTTCCACTGCACAG+TGG | + | chr1.1:61545286-61545305 | MS.gene056055:CDS | 55.0% | |
| CGGAGTCCTGGTTGAAGGAT+AGG | - | chr1.1:61543816-61543835 | None:intergenic | 55.0% | |
| CGGCGGAAAATTTCGCGGAA+GGG | - | chr1.1:61543889-61543908 | None:intergenic | 55.0% | |
| GAAGGATAGGTGGAGGACGT+TGG | - | chr1.1:61543803-61543822 | None:intergenic | 55.0% | |
| GACAGCTAACCACTGTGCAG+TGG | - | chr1.1:61545298-61545317 | None:intergenic | 55.0% | |
| GATTTGTCGCCCACCACTGT+TGG | + | chr1.1:61546534-61546553 | MS.gene056055:intron | 55.0% | |
| GCCTTCCAAGGACGTACACA+GGG | + | chr1.1:61546445-61546464 | MS.gene056055:intron | 55.0% | |
| GCTTGTCCTGGGTTGCAGAA+GGG | + | chr1.1:61544237-61544256 | MS.gene056055:CDS | 55.0% | |
| GGACGTACACAGGGAATACC+GGG | + | chr1.1:61546454-61546473 | MS.gene056055:intron | 55.0% | |
| GGCGGAAAATTTCGCGGAAG+GGG | - | chr1.1:61543888-61543907 | None:intergenic | 55.0% | |
| GGTTTCCAACCCAACAGTGG+TGG | - | chr1.1:61546547-61546566 | None:intergenic | 55.0% | |
| GTCTAGTCCTACTAGCCCGT+CGG | + | chr1.1:61545404-61545423 | MS.gene056055:CDS | 55.0% | |
| TACCGGGTTCAATTCCCAGG+GGG | + | chr1.1:61546470-61546489 | MS.gene056055:intron | 55.0% | |
| TCCCTGTGTACGTCCTTGGA+AGG | - | chr1.1:61546449-61546468 | None:intergenic | 55.0% | |
| TTCCCCCTGGGAATTGAACC+CGG | - | chr1.1:61546475-61546494 | None:intergenic | 55.0% | |
| ! | AACGCTTTTGGCCTGCAAGC+TGG | - | chr1.1:61545083-61545102 | None:intergenic | 55.0% |
| ! | ACCGGTTTCCAACCCAACAG+TGG | - | chr1.1:61546550-61546569 | None:intergenic | 55.0% |
| ! | CCAAGTTGCTTGGGCTCTAG+TGG | + | chr1.1:61546423-61546442 | MS.gene056055:intron | 55.0% |
| !! | ACAGTGGTGGGCGACAAATC+CGG | - | chr1.1:61546534-61546553 | None:intergenic | 55.0% |
| !! | CGGGCTAGTAGGACTAGACT+CGG | - | chr1.1:61545403-61545422 | None:intergenic | 55.0% |
| AAAGAGACGAAGCCGCCGAC+GGG | - | chr1.1:61545422-61545441 | None:intergenic | 60.0% | |
| ACTAAGCCAATTCCGCCGCC+GGG | - | chr1.1:61543922-61543941 | None:intergenic | 60.0% | |
| AGGTGGAGGACGTTGGAGGT+AGG | - | chr1.1:61543796-61543815 | None:intergenic | 60.0% | |
| ATCCTCGCTTTCGTCGGTGG+CGG | + | chr1.1:61543964-61543983 | MS.gene056055:CDS | 60.0% | |
| CGGAATAGCGTAGCGGTGCT+GGG | - | chr1.1:61545114-61545133 | None:intergenic | 60.0% | |
| GAAAGAGACGAAGCCGCCGA+CGG | - | chr1.1:61545423-61545442 | None:intergenic | 60.0% | |
| GACTAAGCCAATTCCGCCGC+CGG | - | chr1.1:61543923-61543942 | None:intergenic | 60.0% | |
| GCATGCCTCTACGCATGAGC+CGG | + | chr1.1:61546512-61546531 | MS.gene056055:intron | 60.0% | |
| GCGGCGGAAAATTTCGCGGA+AGG | - | chr1.1:61543890-61543909 | None:intergenic | 60.0% | |
| GGATAGGTGGAGGACGTTGG+AGG | - | chr1.1:61543800-61543819 | None:intergenic | 60.0% | |
| GGCCTTCCAAGGACGTACAC+AGG | + | chr1.1:61546444-61546463 | MS.gene056055:intron | 60.0% | |
| GGCTTGTCCTGGGTTGCAGA+AGG | + | chr1.1:61544236-61544255 | MS.gene056055:CDS | 60.0% | |
| GGGCAGGTGCGACACTATCT+AGG | - | chr1.1:61544663-61544682 | None:intergenic | 60.0% | |
| GTGCAGTGGAAGAGAAGGCG+AGG | - | chr1.1:61545284-61545303 | None:intergenic | 60.0% | |
| TAGTCCTACTAGCCCGTCGG+CGG | + | chr1.1:61545407-61545426 | MS.gene056055:CDS | 60.0% | |
| TTCCCAGGGGGAACAACGCT+TGG | + | chr1.1:61546482-61546501 | MS.gene056055:intron | 60.0% | |
| ! | AGCCAAGCGTTGTTCCCCCT+GGG | - | chr1.1:61546487-61546506 | None:intergenic | 60.0% |
| ! | TAGCCAAGCGTTGTTCCCCC+TGG | - | chr1.1:61546488-61546507 | None:intergenic | 60.0% |
| ! | TAGCGTAGCGGTGCTGGGTT+CGG | - | chr1.1:61545109-61545128 | None:intergenic | 60.0% |
| ! | TGGGCTCTAGTGGCCTTCCA+AGG | + | chr1.1:61546433-61546452 | MS.gene056055:intron | 60.0% |
| ! | TGGGTTCGGCGCAACGCTTT+TGG | - | chr1.1:61545095-61545114 | None:intergenic | 60.0% |
| !! | TTCCGCCGCGATTTTGGTCC+CGG | + | chr1.1:61543901-61543920 | MS.gene056055:CDS | 60.0% |
| ATCCGCCACCGACGAAAGCG+AGG | - | chr1.1:61543969-61543988 | None:intergenic | 65.0% | |
| GCAGCCGGAGTCCTGGTTGA+AGG | - | chr1.1:61543821-61543840 | None:intergenic | 65.0% | |
| GCGGAAGCCATGATCGGTGC+CGG | - | chr1.1:61543851-61543870 | None:intergenic | 65.0% | |
| GCGGAATAGCGTAGCGGTGC+TGG | - | chr1.1:61545115-61545134 | None:intergenic | 65.0% | |
| GTCGCCCACCACTGTTGGGT+TGG | + | chr1.1:61546539-61546558 | MS.gene056055:intron | 65.0% | |
| TTTGGTCCCGGCGGCGGAAT+TGG | + | chr1.1:61543913-61543932 | MS.gene056055:CDS | 65.0% | |
| !! | GAAGCCATGATCGGTGCCGG+CGG | - | chr1.1:61543848-61543867 | None:intergenic | 65.0% |
| !! | TTTGCCGCCGGCACCGATCA+TGG | + | chr1.1:61543841-61543860 | MS.gene056055:CDS | 65.0% |
| CGCCGCCGGGACCAAAATCG+CGG | - | chr1.1:61543909-61543928 | None:intergenic | 70.0% | |
| CGCCGGGACCAAAATCGCGG+CGG | - | chr1.1:61543906-61543925 | None:intergenic | 70.0% | |
| CGGCAAAGCAGCCGGAGTCC+TGG | - | chr1.1:61543828-61543847 | None:intergenic | 70.0% | |
| ! | GACTCCGGCTGCTTTGCCGC+CGG | + | chr1.1:61543829-61543848 | MS.gene056055:CDS | 70.0% |
| !! | CGCCGCGATTTTGGTCCCGG+CGG | + | chr1.1:61543904-61543923 | MS.gene056055:CDS | 70.0% |
| !! | CGCGATTTTGGTCCCGGCGG+CGG | + | chr1.1:61543907-61543926 | MS.gene056055:CDS | 70.0% |
| !! | GAAGCCGCCGACGGGCTAGT+AGG | - | chr1.1:61545414-61545433 | None:intergenic | 70.0% |
| !! | GGTGCCGGCGGCAAAGCAGC+CGG | - | chr1.1:61543836-61543855 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 61543736 | 61546973 | 61543736 | ID=MS.gene056055 |
| chr1.1 | mRNA | 61543736 | 61546973 | 61543736 | ID=MS.gene056055.t1;Parent=MS.gene056055 |
| chr1.1 | exon | 61543736 | 61544431 | 61543736 | ID=MS.gene056055.t1.exon1;Parent=MS.gene056055.t1 |
| chr1.1 | CDS | 61543736 | 61544431 | 61543736 | ID=cds.MS.gene056055.t1;Parent=MS.gene056055.t1 |
| chr1.1 | exon | 61545246 | 61545453 | 61545246 | ID=MS.gene056055.t1.exon2;Parent=MS.gene056055.t1 |
| chr1.1 | CDS | 61545246 | 61545453 | 61545246 | ID=cds.MS.gene056055.t1;Parent=MS.gene056055.t1 |
| chr1.1 | exon | 61545652 | 61545778 | 61545652 | ID=MS.gene056055.t1.exon3;Parent=MS.gene056055.t1 |
| chr1.1 | CDS | 61545652 | 61545778 | 61545652 | ID=cds.MS.gene056055.t1;Parent=MS.gene056055.t1 |
| chr1.1 | exon | 61546883 | 61546973 | 61546883 | ID=MS.gene056055.t1.exon4;Parent=MS.gene056055.t1 |
| chr1.1 | CDS | 61546883 | 61546973 | 61546883 | ID=cds.MS.gene056055.t1;Parent=MS.gene056055.t1 |
| Gene Sequence |
| Protein sequence |
