Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056229.t1 | XP_003627849.1 | 96 | 1118 | 35 | 1 | 1 | 1108 | 1 | 1118 | 0.00E+00 | 2286.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056229.t1 | A5F5U6 | 39.8 | 1102 | 540 | 20 | 24 | 1093 | 13 | 1023 | 2.0e-224 | 780.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056229.t1 | G7LG20 | 96.0 | 1118 | 35 | 1 | 1 | 1108 | 1 | 1118 | 0.0e+00 | 2286.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056229 | MS.gene066439 | 0.815433 | 9.27E-52 | -1.69E-46 |
MS.gene056229 | MS.gene28284 | 0.838845 | 2.26E-57 | -1.69E-46 |
MS.gene056229 | MS.gene35252 | 0.806561 | 7.75E-50 | -1.69E-46 |
MS.gene056229 | MS.gene45812 | 0.801151 | 1.03E-48 | -1.69E-46 |
MS.gene056229 | MS.gene56840 | 0.809863 | 1.53E-50 | -1.69E-46 |
MS.gene056229 | MS.gene90825 | 0.809079 | 2.26E-50 | -1.69E-46 |
MS.gene056229 | MS.gene97346 | 0.818828 | 1.60E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056229.t1 | MTR_8g039160 | 95.975 | 1118 | 35 | 1 | 1 | 1108 | 1 | 1118 | 0.0 | 2236 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056229.t1 | AT3G54440 | 67.087 | 1109 | 348 | 3 | 8 | 1105 | 3 | 1105 | 0.0 | 1583 |
MS.gene056229.t1 | AT3G54440 | 67.027 | 1110 | 348 | 4 | 8 | 1105 | 3 | 1106 | 0.0 | 1578 |
MS.gene056229.t1 | AT3G54440 | 66.310 | 1122 | 348 | 4 | 8 | 1105 | 3 | 1118 | 0.0 | 1574 |
Find 273 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTTTGCCTTTCCCACTTC+TGG | 0.164865 | 8.1:+65100522 | None:intergenic |
TTCATCATCTTCATCTTCTT+TGG | 0.170568 | 8.1:-65104714 | MS.gene056229:CDS |
GGAATATATGCTTCAAAATA+TGG | 0.197510 | 8.1:-65097015 | MS.gene056229:CDS |
TAACTGCTCTGCGGCTTTAT+TGG | 0.204346 | 8.1:+65098289 | None:intergenic |
TGCTTCTGGGGATGTCATTT+TGG | 0.205199 | 8.1:-65097295 | MS.gene056229:CDS |
AGGGCATACACCCGTGTTTC+TGG | 0.206830 | 8.1:-65097557 | MS.gene056229:CDS |
TTAAATCTTTGTCTGGATAT+TGG | 0.221104 | 8.1:-65103801 | MS.gene056229:CDS |
ACATACACAATTTATGCTTC+TGG | 0.242009 | 8.1:-65097309 | MS.gene056229:CDS |
TGGGCATATGGAGGTGAATT+TGG | 0.252083 | 8.1:-65098741 | MS.gene056229:CDS |
ATGGGAATTTGCATATATAT+TGG | 0.252616 | 8.1:-65098942 | MS.gene056229:CDS |
GACTCCAAGGAGGCTTTATA+TGG | 0.256554 | 8.1:-65098897 | MS.gene056229:CDS |
ATAAAACCTTTGATTTCTTC+TGG | 0.257675 | 8.1:+65097346 | None:intergenic |
AGGAGTACATGTTATGAATA+AGG | 0.259844 | 8.1:-65097577 | MS.gene056229:intron |
CACAATTATGAGCTAGTTAA+AGG | 0.265051 | 8.1:-65096928 | MS.gene056229:CDS |
ATGTGTTCACGACCAATATT+TGG | 0.269667 | 8.1:-65096444 | MS.gene056229:CDS |
TGCTCCAAACAATAGTTATA+AGG | 0.285170 | 8.1:-65104675 | MS.gene056229:CDS |
AACCAACAACTGCGCCTTTA+GGG | 0.288905 | 8.1:-65101152 | MS.gene056229:CDS |
CACAAACAACTGCTGGTTAA+TGG | 0.289008 | 8.1:-65100588 | MS.gene056229:CDS |
CAAACAATAGTTATAAGGTT+TGG | 0.297132 | 8.1:-65104670 | MS.gene056229:CDS |
CATGTTCCTTATATTGTTCC+AGG | 0.306781 | 8.1:-65097096 | MS.gene056229:CDS |
ACGAAGCAAAGTGGATTATC+TGG | 0.308876 | 8.1:-65103908 | MS.gene056229:CDS |
CAACCAACAACTGCGCCTTT+AGG | 0.312369 | 8.1:-65101153 | MS.gene056229:CDS |
AAAACCATGTGTCTCAATAT+TGG | 0.318441 | 8.1:+65099517 | None:intergenic |
GAAGCTACACTCTATGATTC+TGG | 0.323404 | 8.1:-65101240 | MS.gene056229:CDS |
TGGAAAGATGATGCTGTTAA+TGG | 0.325237 | 8.1:-65103868 | MS.gene056229:CDS |
TCACTTAAATTCACCTTGAT+TGG | 0.328554 | 8.1:+65098507 | None:intergenic |
ACCTTTGATTTCTTCTGGTT+TGG | 0.328842 | 8.1:+65097351 | None:intergenic |
AAACAATAGTTATAAGGTTT+GGG | 0.335880 | 8.1:-65104669 | MS.gene056229:CDS |
GATTCCCCTGGAACAATATA+AGG | 0.337392 | 8.1:+65097090 | None:intergenic |
TATATTGTTCCAGGGGAATC+TGG | 0.339319 | 8.1:-65097087 | MS.gene056229:CDS |
ATCATACCTTCCCACTCTTT+AGG | 0.342422 | 8.1:+65103153 | None:intergenic |
CCGGTAACTCCAGCTACTTC+TGG | 0.342898 | 8.1:-65096383 | MS.gene056229:CDS |
TGGGAATTTGCATATATATT+GGG | 0.343536 | 8.1:-65098941 | MS.gene056229:CDS |
CAAACCTTATAACTATTGTT+TGG | 0.344950 | 8.1:+65104671 | None:intergenic |
ATTTCATGATAGTGAGTTCC+AGG | 0.345918 | 8.1:-65103737 | MS.gene056229:CDS |
ATCATAGAGTGTAGCTTCTA+TGG | 0.346306 | 8.1:+65101245 | None:intergenic |
TTTCTCCATTTGATGAATGA+TGG | 0.348602 | 8.1:+65104641 | None:intergenic |
CCAGAAGTAGCTGGAGTTAC+CGG | 0.348864 | 8.1:+65096383 | None:intergenic |
ATCACACATGCATTATTTCC+TGG | 0.358955 | 8.1:-65099400 | MS.gene056229:CDS |
TATGTCGTTGATTGGCAATC+AGG | 0.361563 | 8.1:-65098268 | MS.gene056229:CDS |
GAAGCAATTGACAACACATT+TGG | 0.364283 | 8.1:-65098919 | MS.gene056229:CDS |
AGACCACAAGCACATGGGTT+TGG | 0.374469 | 8.1:-65096489 | MS.gene056229:CDS |
CAAGACCATTGGCGCATGTC+TGG | 0.374491 | 8.1:-65102092 | MS.gene056229:CDS |
GCCCTATGTATATGCGAGTT+TGG | 0.375212 | 8.1:-65099157 | MS.gene056229:CDS |
TCATACTCGCACAGTATTAG+AGG | 0.376241 | 8.1:+65099095 | None:intergenic |
TTTAAGTGACGGAAAATTAG+AGG | 0.381031 | 8.1:-65098493 | MS.gene056229:intron |
TGATTCCAGGCTATCAATAT+TGG | 0.382164 | 8.1:-65097714 | MS.gene056229:intron |
TGTAACCTTCAACAGATTCA+TGG | 0.384506 | 8.1:+65104591 | None:intergenic |
TAGCCGTTCAAGTGTTTAGA+TGG | 0.386493 | 8.1:-65102139 | MS.gene056229:CDS |
TTCACGCCTCTTATTAAAAC+AGG | 0.387060 | 8.1:+65100561 | None:intergenic |
CATACACAATTTATGCTTCT+GGG | 0.390353 | 8.1:-65097308 | MS.gene056229:CDS |
TGGTTTCTCAATCTGCTGTT+TGG | 0.393218 | 8.1:-65103888 | MS.gene056229:CDS |
GACCACAAGCACATGGGTTT+GGG | 0.394165 | 8.1:-65096488 | MS.gene056229:CDS |
TATGAGCTATGTGATTTGTT+TGG | 0.395260 | 8.1:-65099560 | MS.gene056229:CDS |
TCATCTTCATCTTCTTTGGT+TGG | 0.395485 | 8.1:-65104710 | MS.gene056229:CDS |
GTGTAGGATCACTTAAATAT+TGG | 0.397599 | 8.1:-65103936 | MS.gene056229:intron |
TGCGCAGCAGCATTTCTATC+TGG | 0.398061 | 8.1:+65097153 | None:intergenic |
TTCTCCATTTGATGAATGAT+GGG | 0.400191 | 8.1:+65104642 | None:intergenic |
CATTAACCAGCAGTTGTTTG+TGG | 0.400206 | 8.1:+65100589 | None:intergenic |
AAAGCTTTGGTCAGCAGAAC+AGG | 0.400641 | 8.1:-65101091 | MS.gene056229:intron |
GGAGTACATGTTATGAATAA+GGG | 0.405550 | 8.1:-65097576 | MS.gene056229:intron |
TATATGGGATTGGGTTGATC+AGG | 0.407078 | 8.1:-65098881 | MS.gene056229:intron |
GGAATCCTCTGATGGGAATC+CGG | 0.411642 | 8.1:-65101211 | MS.gene056229:CDS |
CTTCCCACTCTTTAGGAAGA+TGG | 0.413677 | 8.1:+65103160 | None:intergenic |
AAGGAGGCTTTATATGGGAT+TGG | 0.413887 | 8.1:-65098891 | MS.gene056229:CDS |
CAGGTCCATGGTATTCTCTA+TGG | 0.414758 | 8.1:-65098249 | MS.gene056229:CDS |
ATTGGACAGTTCCTTCGAAT+TGG | 0.415249 | 8.1:-65103293 | MS.gene056229:intron |
GTGGTAGGGCAGATGTTAGA+TGG | 0.416056 | 8.1:-65097065 | MS.gene056229:CDS |
AGGAGGCTTTATATGGGATT+GGG | 0.417518 | 8.1:-65098890 | MS.gene056229:CDS |
CACTCTATGATTCTGGAAGC+TGG | 0.420632 | 8.1:-65101233 | MS.gene056229:CDS |
AAATTTAGCAGGGACATTGC+TGG | 0.420937 | 8.1:+65103756 | None:intergenic |
GTAACATTCAACACTAAAAC+AGG | 0.421090 | 8.1:-65097624 | MS.gene056229:intron |
CATTGCCATGAATCTGTTGA+AGG | 0.421511 | 8.1:-65104596 | MS.gene056229:intron |
TTCAAGGAAGAGATTCTTCT+CGG | 0.426876 | 8.1:-65099232 | MS.gene056229:CDS |
TATGTTACATTTGTATATAT+AGG | 0.428619 | 8.1:+65103249 | None:intergenic |
GTTAACTTACCATGTAAAAC+AGG | 0.430946 | 8.1:+65098654 | None:intergenic |
AACTGCAATCACCAAAGCTT+TGG | 0.432238 | 8.1:-65101104 | MS.gene056229:CDS |
TGGATAAACGGCCATCCTAT+AGG | 0.432553 | 8.1:-65102679 | MS.gene056229:CDS |
GAACGGCTAGAACATTCTTC+AGG | 0.433961 | 8.1:+65102153 | None:intergenic |
AAAGGAGGAAGATCAGCATT+TGG | 0.434408 | 8.1:+65097258 | None:intergenic |
ATTAACCAGCAGTTGTTTGT+GGG | 0.439762 | 8.1:+65100590 | None:intergenic |
TCCTCCTTTATCATTGTCAA+TGG | 0.442513 | 8.1:+65097527 | None:intergenic |
CCCTATGTATATGCGAGTTT+GGG | 0.444022 | 8.1:-65099156 | MS.gene056229:CDS |
AAATGCGGTTAAAGTGTTAG+TGG | 0.445852 | 8.1:-65097412 | MS.gene056229:CDS |
TGCATTATTTCCTGGTCTCT+AGG | 0.446467 | 8.1:-65099392 | MS.gene056229:CDS |
TGGTCTCTAGGGAATGAATC+TGG | 0.448268 | 8.1:-65099380 | MS.gene056229:CDS |
AATGCATCAGGTTGGATTCA+AGG | 0.448460 | 8.1:-65099248 | MS.gene056229:intron |
AACCCTAAAGGCGCAGTTGT+TGG | 0.450432 | 8.1:+65101150 | None:intergenic |
ACAACTAATGTATAGAGGTT+TGG | 0.453042 | 8.1:+65100687 | None:intergenic |
AGAGCAGTTATGTCGTTGAT+TGG | 0.453299 | 8.1:-65098276 | MS.gene056229:CDS |
CTAGGGAATGAATCTGGATT+CGG | 0.454163 | 8.1:-65099374 | MS.gene056229:CDS |
GCTTCCATTGACAATGATAA+AGG | 0.455900 | 8.1:-65097531 | MS.gene056229:CDS |
CAGCTTCAACCCAGCGTGTA+GGG | 0.458293 | 8.1:+65098173 | None:intergenic |
GCACTGGAGGAACCAAATAT+TGG | 0.459462 | 8.1:+65096432 | None:intergenic |
CCAGACAAAGATTTAACAAA+AGG | 0.460237 | 8.1:+65103808 | None:intergenic |
AAATGCTGCTGCGCAGGTTG+CGG | 0.461757 | 8.1:-65097145 | MS.gene056229:CDS |
TCTTCCTCCTTTGCCACGCG+TGG | 0.462670 | 8.1:-65097247 | MS.gene056229:CDS |
TGTTCTGCTGACCAAAGCTT+TGG | 0.462738 | 8.1:+65101093 | None:intergenic |
TTGTCCAAGTGGAAAGCTGC+TGG | 0.463387 | 8.1:-65097489 | MS.gene056229:CDS |
GTCGTCCTCAAAGATAAATC+TGG | 0.463737 | 8.1:-65100666 | MS.gene056229:CDS |
CGTGGGAATCGAGATGAACT+TGG | 0.463775 | 8.1:-65097229 | MS.gene056229:CDS |
TTAAATTCACCTTGATTGGT+TGG | 0.466615 | 8.1:+65098511 | None:intergenic |
AAAGGAGGATCAAGGGGAAA+TGG | 0.466988 | 8.1:+65103225 | None:intergenic |
ACGTGTTTCTGTAGGATCAT+TGG | 0.467539 | 8.1:+65099118 | None:intergenic |
AAGACCCATCATTCATCAAA+TGG | 0.468785 | 8.1:-65104646 | MS.gene056229:CDS |
GGAACAGTGTCTCTCTTAGA+TGG | 0.470496 | 8.1:+65098118 | None:intergenic |
TCACTATCATGAAATTTAGC+AGG | 0.471366 | 8.1:+65103745 | None:intergenic |
GAGTCATACCTGTATCCTAT+AGG | 0.475275 | 8.1:+65102664 | None:intergenic |
AAGTACTCCATTCTGAATCC+TGG | 0.475597 | 8.1:+65103719 | None:intergenic |
AGCTGGTATATTTCAGCAGA+TGG | 0.477055 | 8.1:-65098346 | MS.gene056229:CDS |
CGGAGATAACCTAACAGAAA+AGG | 0.479851 | 8.1:+65096403 | None:intergenic |
TGACAGGTATTCACATGCAA+TGG | 0.482914 | 8.1:-65098974 | MS.gene056229:intron |
GCATTATTTCCTGGTCTCTA+GGG | 0.483687 | 8.1:-65099391 | MS.gene056229:CDS |
AATTTAGCAGGGACATTGCT+GGG | 0.486146 | 8.1:+65103757 | None:intergenic |
CTGCTCTGCGGCTTTATTGG+AGG | 0.486334 | 8.1:+65098292 | None:intergenic |
CTATCTGGATAACACTCAAA+TGG | 0.487845 | 8.1:+65097168 | None:intergenic |
GACAGGTATTCACATGCAAT+GGG | 0.488489 | 8.1:-65098973 | MS.gene056229:intron |
GGTACAAAGCAATGGGCATA+TGG | 0.489144 | 8.1:-65098753 | MS.gene056229:CDS |
TTTGTTTGAACGGTCTCGTA+TGG | 0.490798 | 8.1:-65098695 | MS.gene056229:CDS |
TCTCGGGTTATACATTATGA+AGG | 0.491601 | 8.1:-65099215 | MS.gene056229:CDS |
CGCCCAAACCCATGTGCTTG+TGG | 0.491929 | 8.1:+65096486 | None:intergenic |
GTTCCTACTGAAAATCCAAC+TGG | 0.493013 | 8.1:-65103201 | MS.gene056229:CDS |
TTGGATCAAGTAAGTTGGTA+TGG | 0.496315 | 8.1:-65097198 | MS.gene056229:CDS |
ACAGGATGAGCAGTTCGATC+AGG | 0.498959 | 8.1:+65098672 | None:intergenic |
GCCGTTTATCCACGCACAAA+AGG | 0.507068 | 8.1:+65102690 | None:intergenic |
AGCAGACGGTACAAAGCAAT+GGG | 0.508687 | 8.1:-65098760 | MS.gene056229:CDS |
ACATTAGATGAAAGAAGATC+CGG | 0.509912 | 8.1:+65101192 | None:intergenic |
AACAGCTCTCAGCAATAAAG+TGG | 0.510245 | 8.1:+65097454 | None:intergenic |
TCAGCAGATGGATACAAACT+TGG | 0.510513 | 8.1:-65098334 | MS.gene056229:CDS |
CTGGAGAGTTGGAGTTCAGC+TGG | 0.512743 | 8.1:-65098363 | MS.gene056229:CDS |
ACGGCCATCCTATAGGATAC+AGG | 0.513529 | 8.1:-65102672 | MS.gene056229:intron |
AATCCCATATAAAGCCTCCT+TGG | 0.513637 | 8.1:+65098893 | None:intergenic |
AACCTAACAGAAAAGGAGTA+AGG | 0.513934 | 8.1:+65096410 | None:intergenic |
CTTGCACTCATTTGCATGGG+TGG | 0.515880 | 8.1:+65096985 | None:intergenic |
CACGTCCAGATTTATCTTTG+AGG | 0.516054 | 8.1:+65100661 | None:intergenic |
ACCTTGAGGATCAAGACCAT+TGG | 0.516261 | 8.1:-65102103 | MS.gene056229:CDS |
AAGAGAACCCTCCTTGCCCT+TGG | 0.516769 | 8.1:+65097374 | None:intergenic |
ACAGAAAAGGAGTAAGGCAC+TGG | 0.517353 | 8.1:+65096416 | None:intergenic |
AATTCCAGCAGCTTTCCACT+TGG | 0.519444 | 8.1:+65097485 | None:intergenic |
ACTCCAAGGAGGCTTTATAT+GGG | 0.520376 | 8.1:-65098896 | MS.gene056229:CDS |
GGAAGCTGGGAATCCTCTGA+TGG | 0.522227 | 8.1:-65101219 | MS.gene056229:CDS |
TGTTCTGTACAGAGTGCGAC+AGG | 0.522462 | 8.1:-65097435 | MS.gene056229:CDS |
AGATAGAAATGCTGCTGCGC+AGG | 0.523174 | 8.1:-65097151 | MS.gene056229:CDS |
AATCATTGGATCAAGTAAGT+TGG | 0.523512 | 8.1:-65097203 | MS.gene056229:CDS |
TCGATTCCCACGCGTGGCAA+AGG | 0.525991 | 8.1:+65097240 | None:intergenic |
TCCAGGGGAATCTGGTGGTA+GGG | 0.528005 | 8.1:-65097079 | MS.gene056229:CDS |
GACTTTGATTGTATCTCCAA+CGG | 0.528055 | 8.1:+65097668 | None:intergenic |
CAGGCTATCAATATTGGTAG+TGG | 0.528455 | 8.1:-65097708 | MS.gene056229:CDS |
TAGGAACGAAAGGAGGATCA+AGG | 0.528970 | 8.1:+65103217 | None:intergenic |
GGATGCCAGACATGCGCCAA+TGG | 0.530052 | 8.1:+65102087 | None:intergenic |
TCCTACTCTGGAACCAATGT+GGG | 0.531213 | 8.1:-65099471 | MS.gene056229:CDS |
GTTTGGGCGGAGATGATAGT+TGG | 0.531663 | 8.1:-65096472 | MS.gene056229:CDS |
CTAAAGGCGCAGTTGTTGGT+TGG | 0.531853 | 8.1:+65101154 | None:intergenic |
ACATCTCAAGCATCCTACTC+TGG | 0.532299 | 8.1:-65099483 | MS.gene056229:CDS |
ATGTCATGACCAGAAGTAGC+TGG | 0.533090 | 8.1:+65096374 | None:intergenic |
CCATGGTGTTACCAAGGGCA+AGG | 0.533252 | 8.1:-65097385 | MS.gene056229:CDS |
CCTTCGAATTGGCAGCTGCA+TGG | 0.533685 | 8.1:-65103282 | MS.gene056229:CDS |
GTTCTTATACCAACCAATCA+AGG | 0.533846 | 8.1:-65098520 | MS.gene056229:CDS |
GGACGACAACTAATGTATAG+AGG | 0.534254 | 8.1:+65100682 | None:intergenic |
TCAGTGACTTCAAACTCTGC+AGG | 0.534335 | 8.1:+65102200 | None:intergenic |
TCCAACTGGCTGCTACAGAA+TGG | 0.535017 | 8.1:-65103187 | MS.gene056229:CDS |
ACTCTATGATTCTGGAAGCT+GGG | 0.535525 | 8.1:-65101232 | MS.gene056229:CDS |
TAAAGCCCACAAACAACTGC+TGG | 0.536619 | 8.1:-65100595 | MS.gene056229:CDS |
AAGAAATACCTTGACCATGC+AGG | 0.537091 | 8.1:+65100494 | None:intergenic |
CAAGTAAGTTGGTATGGAAG+AGG | 0.537732 | 8.1:-65097192 | MS.gene056229:CDS |
GCAATGTTGGATCGTGTGAT+TGG | 0.538798 | 8.1:-65099443 | MS.gene056229:CDS |
GCAAGGACAGTCAAGACAGC+AGG | 0.538931 | 8.1:-65102226 | MS.gene056229:intron |
ATGCAATGGGAAACAGCAAT+GGG | 0.539255 | 8.1:-65098960 | MS.gene056229:CDS |
AACGTGGATGTTGAGGATAA+TGG | 0.541026 | 8.1:+65099585 | None:intergenic |
AATCTAGTTGTTGAAACCGT+TGG | 0.542542 | 8.1:-65097684 | MS.gene056229:CDS |
GTAGCTTGCACTCATTTGCA+TGG | 0.542678 | 8.1:+65096981 | None:intergenic |
TCCATTCTGTAGCAGCCAGT+TGG | 0.543364 | 8.1:+65103186 | None:intergenic |
AACATTGCAGTTGCCCACAT+TGG | 0.543939 | 8.1:+65099458 | None:intergenic |
GTTATACATTATGAAGGAGG+TGG | 0.544919 | 8.1:-65099209 | MS.gene056229:CDS |
AATGTGGGCAACTGCAATGT+TGG | 0.545197 | 8.1:-65099456 | MS.gene056229:CDS |
TCAAGGAAGAGATTCTTCTC+GGG | 0.548389 | 8.1:-65099231 | MS.gene056229:CDS |
CTTCCTCCTTTGCCACGCGT+GGG | 0.549184 | 8.1:-65097246 | MS.gene056229:CDS |
AAGCAGACGGTACAAAGCAA+TGG | 0.551667 | 8.1:-65098761 | MS.gene056229:CDS |
GCCCTACCACCAGATTCCCC+TGG | 0.552474 | 8.1:+65097078 | None:intergenic |
ATGTTCCTTATATTGTTCCA+GGG | 0.558572 | 8.1:-65097095 | MS.gene056229:CDS |
TTGTTTGGAGCAAGAAGAAG+TGG | 0.563596 | 8.1:+65104686 | None:intergenic |
ATACACAATTTATGCTTCTG+GGG | 0.564364 | 8.1:-65097307 | MS.gene056229:CDS |
TTCCAGGGGAATCTGGTGGT+AGG | 0.564919 | 8.1:-65097080 | MS.gene056229:CDS |
ATTAGAGGACGTGTTTCTGT+AGG | 0.566007 | 8.1:+65099110 | None:intergenic |
TCCCAAACTCGCATATACAT+AGG | 0.566075 | 8.1:+65099155 | None:intergenic |
CCTACACGCTGGGTTGAAGC+TGG | 0.566327 | 8.1:-65098172 | MS.gene056229:CDS |
CTGATAGTTATTTGTCCAAG+TGG | 0.567405 | 8.1:-65097500 | MS.gene056229:CDS |
GGTGTTACCAAGGGCAAGGA+GGG | 0.568952 | 8.1:-65097381 | MS.gene056229:CDS |
TAGCTTGCACTCATTTGCAT+GGG | 0.569490 | 8.1:+65096982 | None:intergenic |
TGGAAGCTCGCCAGAAACAC+GGG | 0.571698 | 8.1:+65097547 | None:intergenic |
CATAGAATCCTGCATGGTCA+AGG | 0.571949 | 8.1:-65100502 | MS.gene056229:intron |
ACTCCATCTAAACACTTGAA+CGG | 0.572559 | 8.1:+65102136 | None:intergenic |
CATGCAATGGGAAACAGCAA+TGG | 0.572998 | 8.1:-65098961 | MS.gene056229:CDS |
ATTGACAATGATAAAGGAGG+AGG | 0.573054 | 8.1:-65097525 | MS.gene056229:CDS |
CCCAAACTCGCATATACATA+GGG | 0.573558 | 8.1:+65099156 | None:intergenic |
TCATCTAGACCACAAGCACA+TGG | 0.575195 | 8.1:-65096495 | MS.gene056229:CDS |
GCCCACATTGGTTCCAGAGT+AGG | 0.576555 | 8.1:+65099470 | None:intergenic |
TGTTCCTTATATTGTTCCAG+GGG | 0.576557 | 8.1:-65097094 | MS.gene056229:CDS |
TCATACCAACGTGGATGTTG+AGG | 0.577231 | 8.1:+65099578 | None:intergenic |
TCCAAACCAGAAGAAATCAA+AGG | 0.580242 | 8.1:-65097352 | MS.gene056229:CDS |
ATTCCCACGCGTGGCAAAGG+AGG | 0.580859 | 8.1:+65097243 | None:intergenic |
GTTAGATTTGAAGAAATAGT+CGG | 0.582094 | 8.1:+65101712 | None:intergenic |
ATGGAAGCTCGCCAGAAACA+CGG | 0.584576 | 8.1:+65097546 | None:intergenic |
GCATGAACATCATCCAGAAG+TGG | 0.588110 | 8.1:-65100535 | MS.gene056229:CDS |
AGGATAATGGCTGTTCCTCA+CGG | 0.588770 | 8.1:+65099598 | None:intergenic |
TTGATTGGCAATCAGGTCCA+TGG | 0.591889 | 8.1:-65098261 | MS.gene056229:CDS |
GACAACACATTTGGACTCCA+AGG | 0.592777 | 8.1:-65098910 | MS.gene056229:CDS |
CCAGCTTCAACCCAGCGTGT+AGG | 0.593463 | 8.1:+65098172 | None:intergenic |
GTGAGTTCCAGGATTCAGAA+TGG | 0.593700 | 8.1:-65103726 | MS.gene056229:CDS |
AAATATTGGTCGTGAACACA+TGG | 0.594381 | 8.1:+65096446 | None:intergenic |
CCATGCAGCTGCCAATTCGA+AGG | 0.594770 | 8.1:+65103282 | None:intergenic |
CGGGTTATACATTATGAAGG+AGG | 0.594871 | 8.1:-65099212 | MS.gene056229:CDS |
GTGTGATTGGCATGGTTGAG+AGG | 0.594959 | 8.1:-65099430 | MS.gene056229:CDS |
AACTAGCTCATAATTGTGTG+CGG | 0.596080 | 8.1:+65096933 | None:intergenic |
TGTTGGTTGGAATGTTATGT+CGG | 0.596597 | 8.1:+65101167 | None:intergenic |
TGGTAGGGCAGATGTTAGAT+GGG | 0.596827 | 8.1:-65097064 | MS.gene056229:CDS |
CACAAGCACATGGGTTTGGG+CGG | 0.600176 | 8.1:-65096485 | MS.gene056229:CDS |
ACATCATCCAGAAGTGGGAA+AGG | 0.600447 | 8.1:-65100529 | MS.gene056229:CDS |
ACTTCCATCTTCCTAAAGAG+TGG | 0.600920 | 8.1:-65103164 | MS.gene056229:CDS |
GACTGTGAATCAAGTCAAGT+AGG | 0.601132 | 8.1:-65100633 | MS.gene056229:CDS |
GTATAGCCATAAAACCCTAA+AGG | 0.601450 | 8.1:+65101138 | None:intergenic |
AGGAACGAAAGGAGGATCAA+GGG | 0.601470 | 8.1:+65103218 | None:intergenic |
TCAGAATGGAGTACTTTACC+TGG | 0.601537 | 8.1:-65103712 | MS.gene056229:intron |
GAAGCTGGGAATCCTCTGAT+GGG | 0.603594 | 8.1:-65101218 | MS.gene056229:CDS |
TGGCAATGTAAATGAACATG+TGG | 0.605259 | 8.1:+65104611 | None:intergenic |
CTTCCATCTTCCTAAAGAGT+GGG | 0.611019 | 8.1:-65103163 | MS.gene056229:CDS |
CATACCTGTATCCTATAGGA+TGG | 0.612930 | 8.1:+65102668 | None:intergenic |
AAGTAAGTTGGTATGGAAGA+GGG | 0.616500 | 8.1:-65097191 | MS.gene056229:CDS |
ATCCTACTCTGGAACCAATG+TGG | 0.616773 | 8.1:-65099472 | MS.gene056229:CDS |
TTCATCTCGATTCCCACGCG+TGG | 0.616808 | 8.1:+65097234 | None:intergenic |
TTGGTATCAACGAAGCAAAG+TGG | 0.616942 | 8.1:-65103917 | MS.gene056229:CDS |
CTTCGGAAGGTTCAAGCAGA+CGG | 0.616957 | 8.1:-65098774 | MS.gene056229:CDS |
TTACATTTGTATATATAGGA+CGG | 0.618958 | 8.1:+65103253 | None:intergenic |
CATGAACATCATCCAGAAGT+GGG | 0.621222 | 8.1:-65100534 | MS.gene056229:CDS |
ATCAAGGTGAATTTAAGTGA+CGG | 0.621430 | 8.1:-65098504 | MS.gene056229:CDS |
TGATTGCTAGGCTCTTCGGA+AGG | 0.623371 | 8.1:-65098787 | MS.gene056229:intron |
GGGCACACAATATCAGTGCA+TGG | 0.624317 | 8.1:+65099176 | None:intergenic |
AGATTCATTCCCTAGAGACC+AGG | 0.625123 | 8.1:+65099382 | None:intergenic |
CACTATCATGAAATTTAGCA+GGG | 0.626645 | 8.1:+65103746 | None:intergenic |
GCCAATGGTCTTGATCCTCA+AGG | 0.628346 | 8.1:+65102102 | None:intergenic |
CATCTTCCTAAAGAGTGGGA+AGG | 0.632656 | 8.1:-65103159 | MS.gene056229:intron |
CAAGTGTTTAGATGGAGTGA+TGG | 0.635673 | 8.1:-65102131 | MS.gene056229:CDS |
GTTGGATCGTGTGATTGGCA+TGG | 0.639581 | 8.1:-65099438 | MS.gene056229:CDS |
GAAAAGGAGTAAGGCACTGG+AGG | 0.641574 | 8.1:+65096419 | None:intergenic |
ATGGCATTCATCATCATCAG+AGG | 0.644858 | 8.1:-65098230 | MS.gene056229:CDS |
TCCATTGACAATGATAAAGG+AGG | 0.645206 | 8.1:-65097528 | MS.gene056229:CDS |
TTCTTCAGGTCTGAACCACA+TGG | 0.647843 | 8.1:+65102167 | None:intergenic |
ATTGTTCCAGGGGAATCTGG+TGG | 0.648023 | 8.1:-65097084 | MS.gene056229:CDS |
ACAAAGCAATGGGCATATGG+AGG | 0.650441 | 8.1:-65098750 | MS.gene056229:CDS |
TGTGATTGGCATGGTTGAGA+GGG | 0.651715 | 8.1:-65099429 | MS.gene056229:CDS |
CCTTGCCCTTGGTAACACCA+TGG | 0.651791 | 8.1:+65097385 | None:intergenic |
CATCTAGACCACAAGCACAT+GGG | 0.652053 | 8.1:-65096494 | MS.gene056229:CDS |
AAGATCCGGATTCCCATCAG+AGG | 0.654491 | 8.1:+65101206 | None:intergenic |
GGCAAACATAGAATCCTGCA+TGG | 0.657884 | 8.1:-65100508 | MS.gene056229:CDS |
TGCAAGCTACTATAGCACTT+CGG | 0.663356 | 8.1:-65096968 | MS.gene056229:CDS |
TGGTGTTACCAAGGGCAAGG+AGG | 0.665446 | 8.1:-65097382 | MS.gene056229:CDS |
GGAACGAAAGGAGGATCAAG+GGG | 0.665703 | 8.1:+65103219 | None:intergenic |
GCTGAACTCCAACTCTCCAG+TGG | 0.669099 | 8.1:+65098366 | None:intergenic |
AACACATTTGGACTCCAAGG+AGG | 0.678148 | 8.1:-65098907 | MS.gene056229:CDS |
GAAGCCAATATTGAGACACA+TGG | 0.690125 | 8.1:-65099521 | MS.gene056229:CDS |
GAATGCCATAGAGAATACCA+TGG | 0.691255 | 8.1:+65098244 | None:intergenic |
ACAGAGTGCGACAGGAAATG+CGG | 0.691328 | 8.1:-65097427 | MS.gene056229:CDS |
ATTATCCTCAACATCCACGT+TGG | 0.696263 | 8.1:-65099583 | MS.gene056229:CDS |
TCTTCTTCTAGCAAAGCCAG+AGG | 0.698538 | 8.1:-65102054 | MS.gene056229:intron |
AGTTAAAGGAGATAACATTG+AGG | 0.710032 | 8.1:-65096914 | MS.gene056229:intron |
TTGCTAGAAGAAGAACATCA+CGG | 0.712658 | 8.1:+65102063 | None:intergenic |
GCTCATAATTGTGTGCGGCG+CGG | 0.713347 | 8.1:+65096938 | None:intergenic |
GGCAATGTAAATGAACATGT+GGG | 0.719822 | 8.1:+65104612 | None:intergenic |
TCAACGACATAACTGCTCTG+CGG | 0.753314 | 8.1:+65098280 | None:intergenic |
GAGTGATGGATGTTACCTTG+AGG | 0.763210 | 8.1:-65102117 | MS.gene056229:CDS |
AAAACAATATCAATGCCGTG+AGG | 0.781560 | 8.1:-65099613 | MS.gene056229:CDS |
TCACATAGCTCATACCAACG+TGG | 0.806258 | 8.1:+65099569 | None:intergenic |
CTAGAAGAAGAACATCACGG+TGG | 0.808389 | 8.1:+65102066 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 65096346 | 65104741 | 65096346 | ID=MS.gene056229 |
chr8.1 | mRNA | 65096346 | 65104741 | 65096346 | ID=MS.gene056229.t1;Parent=MS.gene056229 |
chr8.1 | exon | 65104597 | 65104741 | 65104597 | ID=MS.gene056229.t1.exon1;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65104597 | 65104741 | 65104597 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65103713 | 65103952 | 65103713 | ID=MS.gene056229.t1.exon2;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65103713 | 65103952 | 65103713 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65103160 | 65103306 | 65103160 | ID=MS.gene056229.t1.exon3;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65103160 | 65103306 | 65103160 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65102673 | 65102751 | 65102673 | ID=MS.gene056229.t1.exon4;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65102673 | 65102751 | 65102673 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65102055 | 65102238 | 65102055 | ID=MS.gene056229.t1.exon5;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65102055 | 65102238 | 65102055 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65101679 | 65101744 | 65101679 | ID=MS.gene056229.t1.exon6;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65101679 | 65101744 | 65101679 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65101092 | 65101328 | 65101092 | ID=MS.gene056229.t1.exon7;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65101092 | 65101328 | 65101092 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65100503 | 65100709 | 65100503 | ID=MS.gene056229.t1.exon8;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65100503 | 65100709 | 65100503 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65099351 | 65099654 | 65099351 | ID=MS.gene056229.t1.exon9;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65099351 | 65099654 | 65099351 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65099101 | 65099260 | 65099101 | ID=MS.gene056229.t1.exon10;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65099101 | 65099260 | 65099101 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65098882 | 65098990 | 65098882 | ID=MS.gene056229.t1.exon11;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65098882 | 65098990 | 65098882 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65098664 | 65098799 | 65098664 | ID=MS.gene056229.t1.exon12;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65098664 | 65098799 | 65098664 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65098494 | 65098549 | 65098494 | ID=MS.gene056229.t1.exon13;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65098494 | 65098549 | 65098494 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65098114 | 65098413 | 65098114 | ID=MS.gene056229.t1.exon14;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65098114 | 65098413 | 65098114 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65097625 | 65097727 | 65097625 | ID=MS.gene056229.t1.exon15;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65097625 | 65097727 | 65097625 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65096915 | 65097594 | 65096915 | ID=MS.gene056229.t1.exon16;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65096915 | 65097594 | 65096915 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
chr8.1 | exon | 65096346 | 65096519 | 65096346 | ID=MS.gene056229.t1.exon17;Parent=MS.gene056229.t1 |
chr8.1 | CDS | 65096346 | 65096519 | 65096346 | ID=cds.MS.gene056229.t1;Parent=MS.gene056229.t1 |
Gene Sequence |
Protein sequence |