Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056274.t1 | XP_013470352.1 | 99.9 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.00E+00 | 1670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056274.t1 | Q8H0U4 | 70.5 | 893 | 260 | 3 | 3 | 895 | 2 | 891 | 0.0e+00 | 1271.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056274.t1 | A0A072W2D6 | 99.9 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.0e+00 | 1670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056274 | MS.gene064992 | 0.98891 | 6.54E-176 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014808 | MS.gene056274 | PPI |
| MS.gene072925 | MS.gene056274 | PPI |
| MS.gene32605 | MS.gene056274 | PPI |
| MS.gene072924 | MS.gene056274 | PPI |
| MS.gene32604 | MS.gene056274 | PPI |
| MS.gene072926 | MS.gene056274 | PPI |
| MS.gene32606 | MS.gene056274 | PPI |
| MS.gene014809 | MS.gene056274 | PPI |
| MS.gene014807 | MS.gene056274 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056274.t1 | MTR_1g112920 | 99.888 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.0 | 1839 |
| MS.gene056274.t1 | MTR_1g112920 | 99.629 | 809 | 3 | 0 | 1 | 809 | 1 | 809 | 0.0 | 1655 |
| MS.gene056274.t1 | MTR_8g099785 | 21.550 | 826 | 488 | 35 | 28 | 774 | 12 | 756 | 6.32e-22 | 102 |
| MS.gene056274.t1 | MTR_3g491860 | 21.566 | 779 | 465 | 31 | 68 | 774 | 51 | 755 | 4.09e-20 | 96.7 |
| MS.gene056274.t1 | MTR_3g491840 | 22.074 | 598 | 371 | 20 | 68 | 612 | 51 | 606 | 1.59e-18 | 91.7 |
| MS.gene056274.t1 | MTR_2g006750 | 20.896 | 536 | 342 | 13 | 36 | 554 | 20 | 490 | 5.96e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056274.t1 | AT2G16950 | 75.028 | 893 | 220 | 3 | 3 | 895 | 2 | 891 | 0.0 | 1397 |
| MS.gene056274.t1 | AT2G16950 | 74.693 | 897 | 220 | 4 | 3 | 895 | 2 | 895 | 0.0 | 1390 |
| MS.gene056274.t1 | AT2G16960 | 51.264 | 554 | 252 | 6 | 357 | 895 | 2 | 552 | 0.0 | 548 |
| MS.gene056274.t1 | AT2G16960 | 51.418 | 282 | 114 | 3 | 317 | 598 | 1 | 259 | 5.69e-86 | 284 |
| MS.gene056274.t1 | AT2G16960 | 47.984 | 248 | 116 | 3 | 661 | 895 | 258 | 505 | 9.47e-63 | 221 |
| MS.gene056274.t1 | AT5G53480 | 22.826 | 552 | 328 | 17 | 68 | 573 | 53 | 552 | 1.66e-21 | 101 |
| MS.gene056274.t1 | AT3G08947 | 24.277 | 346 | 189 | 10 | 238 | 555 | 19 | 319 | 3.20e-16 | 83.6 |
| MS.gene056274.t1 | AT3G08947 | 24.277 | 346 | 189 | 10 | 238 | 555 | 19 | 319 | 3.68e-16 | 83.6 |
| MS.gene056274.t1 | AT2G16953 | 45.783 | 83 | 17 | 2 | 726 | 808 | 9 | 63 | 7.29e-13 | 64.7 |
Find 230 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTCTTGATTTGCTTTC+TGG | 0.001329 | 1.3:+76746093 | MS.gene056274:CDS |
| TATTTCTTCCCAGATTATTT+AGG | 0.165061 | 1.3:+76740473 | MS.gene056274:CDS |
| GATTGGAATATTGTTGAATT+TGG | 0.172792 | 1.3:-76737200 | None:intergenic |
| GGGTCTTCTTCGAAGAATTT+TGG | 0.204358 | 1.3:+76744582 | MS.gene056274:CDS |
| ACAATTTGACAACGTTCTTA+TGG | 0.206291 | 1.3:+76744561 | MS.gene056274:CDS |
| CAAGGAGATCTGCACCTTAT+TGG | 0.211567 | 1.3:+76737125 | MS.gene056274:CDS |
| GTACATCGGTGTCAAGAATT+TGG | 0.218570 | 1.3:-76740423 | None:intergenic |
| TTCACGTATTGTTGGTATTC+AGG | 0.235848 | 1.3:-76738295 | None:intergenic |
| CTCTCGAATCCTGTGAATTT+TGG | 0.239943 | 1.3:+76741765 | MS.gene056274:CDS |
| CAGGCCAATCCTGCTGCAGC+TGG | 0.248030 | 1.3:+76746042 | MS.gene056274:intron |
| CAGGTCAAAGCCAATCCTTC+TGG | 0.254724 | 1.3:+76750719 | MS.gene056274:intron |
| AGAAATTTGTTGCTCCAATA+AGG | 0.264624 | 1.3:-76737139 | None:intergenic |
| GTTGACATGCATAGGAAATA+AGG | 0.265987 | 1.3:+76750860 | MS.gene056274:intron |
| GTTTAGCAAATTTATTATTC+AGG | 0.266638 | 1.3:+76744054 | MS.gene056274:CDS |
| GATATTCTCTCAAACGTCTT+TGG | 0.272366 | 1.3:+76742869 | MS.gene056274:CDS |
| ATTTCTTCCCAGATTATTTA+GGG | 0.299791 | 1.3:+76740474 | MS.gene056274:CDS |
| TGATGTTACCCTAAATAATC+TGG | 0.300241 | 1.3:-76740482 | None:intergenic |
| TACAAGGGCTTGCAATAATT+CGG | 0.300709 | 1.3:-76738422 | None:intergenic |
| CAAAGTGCATTTGCCTTACT+TGG | 0.306195 | 1.3:+76747022 | MS.gene056274:CDS |
| TACATCGGTGTCAAGAATTT+GGG | 0.317331 | 1.3:-76740422 | None:intergenic |
| TTGTCAACACATGGAATTTA+CGG | 0.320017 | 1.3:+76742825 | MS.gene056274:CDS |
| TTGATCCATGGATACATATA+AGG | 0.331730 | 1.3:-76740775 | None:intergenic |
| AGCATGAAATACTTCGTATC+AGG | 0.336523 | 1.3:-76744018 | None:intergenic |
| CAATTTGACAACGTTCTTAT+GGG | 0.336844 | 1.3:+76744562 | MS.gene056274:CDS |
| GAGAAAGAAGATGCCTTTAG+AGG | 0.340072 | 1.3:+76750603 | MS.gene056274:CDS |
| ATCAGTGTTGTTGTTCAAAC+TGG | 0.347298 | 1.3:+76738382 | MS.gene056274:CDS |
| AAGCACCTGATGGTTGCATT+TGG | 0.352910 | 1.3:+76744805 | MS.gene056274:CDS |
| CCATACTGCAGCCACATCTA+AGG | 0.353767 | 1.3:+76741690 | MS.gene056274:intron |
| AGCACCTGATGGTTGCATTT+GGG | 0.375893 | 1.3:+76744806 | MS.gene056274:CDS |
| CTTTAAATCACCTCAACAAT+AGG | 0.377945 | 1.3:-76742917 | None:intergenic |
| ATTGTTGAAGTCAGGAAGAT+TGG | 0.379166 | 1.3:-76737217 | None:intergenic |
| TTCAGCAAATTGAGTGAATC+CGG | 0.379593 | 1.3:-76745785 | None:intergenic |
| AATTTGCTGAACCTGTGTTT+AGG | 0.380548 | 1.3:+76745797 | MS.gene056274:CDS |
| AGCCCCAGCTGCAGCAGGAT+TGG | 0.381992 | 1.3:-76746046 | None:intergenic |
| CCGCTGATAAGTCTCAGATT+TGG | 0.382450 | 1.3:+76737175 | MS.gene056274:CDS |
| TGCTGCCACTTCTCAATTAA+CGG | 0.388192 | 1.3:-76745190 | None:intergenic |
| GTCAAATTGTTCGTAACCCT+TGG | 0.388416 | 1.3:-76744548 | None:intergenic |
| ATGAGGTAATTGTTGAAGTC+AGG | 0.393517 | 1.3:-76737225 | None:intergenic |
| ATGTGTGTGGGTTAGGGTAT+CGG | 0.398560 | 1.3:+76744520 | MS.gene056274:intron |
| AGGCCAATCCTGCTGCAGCT+GGG | 0.399079 | 1.3:+76746043 | MS.gene056274:intron |
| GCGCACACATACCAGTTGTT+TGG | 0.401100 | 1.3:-76747341 | None:intergenic |
| AATAATGCATGCTGGGCAAT+TGG | 0.401733 | 1.3:+76747467 | MS.gene056274:CDS |
| ATGAGAATGTCAAGATAAAC+AGG | 0.402241 | 1.3:-76745163 | None:intergenic |
| ATCTCCGACGGTTGACAACT+TGG | 0.403039 | 1.3:-76743216 | None:intergenic |
| TGAAGAGCTGGCACCGCGCT+TGG | 0.405454 | 1.3:+76744771 | MS.gene056274:CDS |
| ACAAGGGCTTGCAATAATTC+GGG | 0.405569 | 1.3:-76738421 | None:intergenic |
| TTTCATGTATCAAGGTTTCA+TGG | 0.405890 | 1.3:+76742607 | MS.gene056274:CDS |
| GAACTCTAGCTGAAGCTGTT+GGG | 0.406676 | 1.3:+76745030 | MS.gene056274:CDS |
| AAATGTACAGGAAATTTCTA+AGG | 0.406680 | 1.3:+76747421 | MS.gene056274:intron |
| TTCGGCAACGATGGCGGCGG+CGG | 0.408972 | 1.3:+76737068 | None:intergenic |
| ACCTCTGCATGCTGAAGAAT+TGG | 0.416754 | 1.3:-76749394 | None:intergenic |
| TCCTTGAAGCCTTGCTCTTG+TGG | 0.420545 | 1.3:-76737108 | None:intergenic |
| GGCCAATCCTGCTGCAGCTG+GGG | 0.422969 | 1.3:+76746044 | MS.gene056274:intron |
| TGGCAGTGGAATAGAGAGTT+TGG | 0.427529 | 1.3:+76746131 | MS.gene056274:CDS |
| GGAAATTTCTAAGGTGCATC+AGG | 0.428251 | 1.3:+76747430 | MS.gene056274:intron |
| CTAGAACCTTAGCCAATGTC+TGG | 0.433718 | 1.3:-76745843 | None:intergenic |
| AATTGGAGAATTAGCAGTTA+AGG | 0.443187 | 1.3:+76747484 | MS.gene056274:CDS |
| TGAACTTGCCTCCAAACAAC+TGG | 0.443517 | 1.3:+76747330 | MS.gene056274:CDS |
| TGAAGTCCGTCCGTCTATCT+TGG | 0.443843 | 1.3:+76741270 | MS.gene056274:CDS |
| ACTCTGATTTCACGTATTGT+TGG | 0.445336 | 1.3:-76738303 | None:intergenic |
| TTCTCAACCTGATCGAGATC+AGG | 0.450786 | 1.3:+76742496 | MS.gene056274:CDS |
| GTGGAGGTTCGACAGGCTGC+AGG | 0.450835 | 1.3:+76738226 | MS.gene056274:CDS |
| TAACACTGGGGAGGCTTGCA+TGG | 0.452151 | 1.3:+76749532 | MS.gene056274:CDS |
| TTTAAGTGTAATTTCATGCC+TGG | 0.452548 | 1.3:+76749369 | MS.gene056274:CDS |
| GGTTGCATTTGGGAAATATC+AGG | 0.455320 | 1.3:+76744816 | MS.gene056274:CDS |
| GGTCTTGCATGGGTATAAAC+AGG | 0.456424 | 1.3:+76750912 | MS.gene056274:CDS |
| TGTGTGTGGGTTAGGGTATC+GGG | 0.457317 | 1.3:+76744521 | MS.gene056274:intron |
| GCACTTGGTGCCATAGGCGA+GGG | 0.460140 | 1.3:+76743272 | MS.gene056274:CDS |
| TTGTTACAGGCACTGGGTCC+CGG | 0.460458 | 1.3:+76745766 | MS.gene056274:intron |
| AGACCTTGTATCACCACATA+TGG | 0.461098 | 1.3:+76749563 | MS.gene056274:CDS |
| TCGAGCAAGGTCTCCAAGTA+AGG | 0.463436 | 1.3:-76747035 | None:intergenic |
| GCAAGCCCTTGTAAGTTGCT+TGG | 0.463586 | 1.3:+76738432 | MS.gene056274:CDS |
| TTCATTAAGAAAGCTATCGT+TGG | 0.466949 | 1.3:+76740616 | MS.gene056274:CDS |
| TGCTCTTGTGGTTGCCACGA+TGG | 0.468773 | 1.3:-76737096 | None:intergenic |
| TCAAATTGTTCGTAACCCTT+GGG | 0.469035 | 1.3:-76744547 | None:intergenic |
| AACCTCGATTTCATGTATCA+AGG | 0.469473 | 1.3:+76742599 | MS.gene056274:CDS |
| TCTGGGAAGAAATATATTGA+TGG | 0.469870 | 1.3:-76740464 | None:intergenic |
| TACTGAGCCCCAGCTGCAGC+AGG | 0.470834 | 1.3:-76746051 | None:intergenic |
| AATTTCTGTGGAGGTTCGAC+AGG | 0.471977 | 1.3:+76738219 | MS.gene056274:CDS |
| GAAGCTGCCGTCTTGGCACT+TGG | 0.472209 | 1.3:+76743257 | MS.gene056274:CDS |
| TTAATGAAGCGTGAGGTGAT+TGG | 0.472656 | 1.3:-76740601 | None:intergenic |
| ATTGATGCACCCCTCGCCTA+TGG | 0.472848 | 1.3:-76743282 | None:intergenic |
| TGTTGGGGCAGAGCTGAATC+AGG | 0.472935 | 1.3:+76745046 | MS.gene056274:CDS |
| GAGATGATGGTTGGAAAGAA+AGG | 0.473248 | 1.3:+76743234 | MS.gene056274:CDS |
| GGTTTCACAATGTTCTTTGA+GGG | 0.475278 | 1.3:+76746955 | MS.gene056274:intron |
| CTCTGCTAAGCCTGGTACAT+CGG | 0.475304 | 1.3:-76740437 | None:intergenic |
| TTGTCAACCGTCGGAGATGA+TGG | 0.475872 | 1.3:+76743221 | MS.gene056274:CDS |
| TTAAATTGTATACATTCCTC+AGG | 0.483514 | 1.3:-76738267 | None:intergenic |
| GGAACTCTAGCTGAAGCTGT+TGG | 0.485991 | 1.3:+76745029 | MS.gene056274:CDS |
| TTAGGGTATCGGGCATCCCA+AGG | 0.486599 | 1.3:+76744531 | MS.gene056274:intron |
| TACTGTCCAAGCAACTTACA+AGG | 0.487673 | 1.3:-76738438 | None:intergenic |
| ATATGTGGTGATACAAGGTC+TGG | 0.487991 | 1.3:-76749561 | None:intergenic |
| TCTGGACTAACAGAGGGTCT+TGG | 0.492966 | 1.3:+76746111 | MS.gene056274:CDS |
| ACCACAAGAGCAAGGCTTCA+AGG | 0.493504 | 1.3:+76737107 | MS.gene056274:CDS |
| ATAGGCGAGGGGTGCATCAA+TGG | 0.494250 | 1.3:+76743284 | MS.gene056274:CDS |
| CTTCATCTTCTCCCGTGCTC+AGG | 0.496141 | 1.3:+76737248 | MS.gene056274:CDS |
| GGCACTTGGTGCCATAGGCG+AGG | 0.496324 | 1.3:+76743271 | MS.gene056274:CDS |
| CATAGCACATAGACCTCTAA+AGG | 0.497484 | 1.3:-76750616 | None:intergenic |
| GGAAACTTATCATCAAGAAG+AGG | 0.498404 | 1.3:-76743995 | None:intergenic |
| AGGTTTCACAATGTTCTTTG+AGG | 0.500017 | 1.3:+76746954 | MS.gene056274:intron |
| AGAAAATAGTGCAATAACAC+TGG | 0.500123 | 1.3:+76749518 | MS.gene056274:CDS |
| TACTCTGATGCCTATTGTTG+AGG | 0.503181 | 1.3:+76742907 | MS.gene056274:CDS |
| GGATGATAATAAGCGTGTAC+AGG | 0.504024 | 1.3:+76744603 | MS.gene056274:CDS |
| GATTTCGGCAACGATGGCGG+CGG | 0.504335 | 1.3:+76737065 | None:intergenic |
| GTAGGAGGCTGCTGAAGAGC+TGG | 0.505364 | 1.3:+76744759 | MS.gene056274:intron |
| TCATTAAGAAAGCTATCGTT+GGG | 0.507655 | 1.3:+76740617 | MS.gene056274:CDS |
| ACTTAGAGCTCCAGAAGGAT+TGG | 0.507834 | 1.3:-76750729 | None:intergenic |
| CCGTGGCAAATAATGCATGC+TGG | 0.511391 | 1.3:+76747459 | MS.gene056274:CDS |
| CATGCTGAAGAATTGGTACC+AGG | 0.511727 | 1.3:-76749387 | None:intergenic |
| GAAGTCTGCCAGGTCTTGCA+TGG | 0.512364 | 1.3:+76750901 | MS.gene056274:CDS |
| TCCATGGATCAATATCTTCA+AGG | 0.514235 | 1.3:+76740786 | MS.gene056274:CDS |
| AGAAAGGGAAGCTGCCGTCT+TGG | 0.515248 | 1.3:+76743250 | MS.gene056274:CDS |
| ATTTCCCAAATGCAACCATC+AGG | 0.515910 | 1.3:-76744810 | None:intergenic |
| TCAGAGTTGCTGCCTTGTCT+CGG | 0.517680 | 1.3:+76738319 | MS.gene056274:CDS |
| CTAACAGAGGGTCTTGGCAG+TGG | 0.521808 | 1.3:+76746117 | MS.gene056274:CDS |
| CACACATACCAGTTGTTTGG+AGG | 0.522579 | 1.3:-76747338 | None:intergenic |
| GCAGATATTGTTGTCAAACA+TGG | 0.522794 | 1.3:+76742331 | MS.gene056274:intron |
| GATGTTACCCTAAATAATCT+GGG | 0.525662 | 1.3:-76740481 | None:intergenic |
| CAAGTAAGGCAAATGCACTT+TGG | 0.525940 | 1.3:-76747021 | None:intergenic |
| AGATGCTGCGCAATGGAGCA+TGG | 0.527099 | 1.3:+76751163 | MS.gene056274:intron |
| GTCTTGGCACTTGGTGCCAT+AGG | 0.527194 | 1.3:+76743266 | MS.gene056274:CDS |
| AAGCAGACCTGATCTCGATC+AGG | 0.528456 | 1.3:-76742503 | None:intergenic |
| CGTGGCAAATAATGCATGCT+GGG | 0.532263 | 1.3:+76747460 | MS.gene056274:CDS |
| ATTCTTGACACCGATGTACC+AGG | 0.532980 | 1.3:+76740427 | MS.gene056274:CDS |
| AACTCTAGCTGAAGCTGTTG+GGG | 0.536483 | 1.3:+76745031 | MS.gene056274:CDS |
| TAGGCTTACTGGAATAAGAC+GGG | 0.537920 | 1.3:-76742235 | None:intergenic |
| GAAATTACACTTAAAACAAA+CGG | 0.538928 | 1.3:-76749361 | None:intergenic |
| AGATGATGGTTGGAAAGAAA+GGG | 0.540726 | 1.3:+76743235 | MS.gene056274:CDS |
| ATGGGCCGCTCTGCTAAGCC+TGG | 0.541464 | 1.3:-76740445 | None:intergenic |
| TGAAATTTGTTACAGGCACT+GGG | 0.542098 | 1.3:+76745760 | MS.gene056274:intron |
| AGTCCGTCCGTCTATCTTGG+AGG | 0.542642 | 1.3:+76741273 | MS.gene056274:CDS |
| TGGAGCATTTCATGCAACCT+TGG | 0.543238 | 1.3:+76749583 | MS.gene056274:CDS |
| TTTCATGCTGGACAGTATCT+CGG | 0.543512 | 1.3:+76744032 | MS.gene056274:CDS |
| CTGGGAAGAAATATATTGAT+GGG | 0.543520 | 1.3:-76740463 | None:intergenic |
| CTTTAGAGGTCTATGTGCTA+TGG | 0.547073 | 1.3:+76750617 | MS.gene056274:CDS |
| AAATCACATGGAAGGTGCAA+TGG | 0.547875 | 1.3:+76738468 | MS.gene056274:CDS |
| GCTCCATATGTGGTGATACA+AGG | 0.548018 | 1.3:-76749566 | None:intergenic |
| TTAGGCCTTATATGTATCCA+TGG | 0.548665 | 1.3:+76740770 | MS.gene056274:intron |
| GACAATACCTCTGGCAGATG+AGG | 0.549518 | 1.3:-76743314 | None:intergenic |
| TTTACACAATGAAGTCTGCC+AGG | 0.551434 | 1.3:+76750891 | MS.gene056274:CDS |
| CAGTACAACATTGCAAAAGT+AGG | 0.552476 | 1.3:-76746979 | None:intergenic |
| CAACCGTCGGAGATGATGGT+TGG | 0.552627 | 1.3:+76743225 | MS.gene056274:CDS |
| GATGTGAAGCACTCTAGAAG+TGG | 0.553176 | 1.3:-76745241 | None:intergenic |
| CAGTAGTGATTTAAATCACA+TGG | 0.555357 | 1.3:+76738456 | MS.gene056274:CDS |
| GTGCAGCAGATAAACACATA+AGG | 0.557393 | 1.3:+76738341 | MS.gene056274:CDS |
| TTGCTTTCTGGACTAACAGA+GGG | 0.557462 | 1.3:+76746105 | MS.gene056274:CDS |
| GCATGAAATACTTCGTATCA+GGG | 0.559620 | 1.3:-76744017 | None:intergenic |
| TACTGCAGAAGTGCGGAAGT+TGG | 0.562642 | 1.3:+76740833 | MS.gene056274:CDS |
| ACCTTGAAGATATTGATCCA+TGG | 0.563420 | 1.3:-76740787 | None:intergenic |
| TCAGACCCAGACATTGGCTA+AGG | 0.565324 | 1.3:+76745837 | MS.gene056274:CDS |
| TGTGTAAAGCCATTGCAAGT+TGG | 0.567608 | 1.3:+76750765 | MS.gene056274:CDS |
| ACATACATGCCAACTTGCAA+TGG | 0.570331 | 1.3:-76750774 | None:intergenic |
| AGAATTGTATATGATGCTGT+TGG | 0.571114 | 1.3:+76745008 | MS.gene056274:CDS |
| CAAATAGTACCAAAATTCAC+AGG | 0.573838 | 1.3:-76741774 | None:intergenic |
| AACACTGGGGAGGCTTGCAT+GGG | 0.576589 | 1.3:+76749533 | MS.gene056274:CDS |
| GAATGAAGATACCTGAGCAC+GGG | 0.578328 | 1.3:-76737259 | None:intergenic |
| CCAGCATGCATTATTTGCCA+CGG | 0.578982 | 1.3:-76747459 | None:intergenic |
| GATGCTGCGCAATGGAGCAT+GGG | 0.582692 | 1.3:+76751164 | MS.gene056274:intron |
| GTTATATAGATGCTGCGCAA+TGG | 0.582846 | 1.3:+76751156 | MS.gene056274:intron |
| TTGCTGAACCTGTGTTTAGG+AGG | 0.584270 | 1.3:+76745800 | MS.gene056274:CDS |
| GAAACTTATCATCAAGAAGA+GGG | 0.586624 | 1.3:-76743994 | None:intergenic |
| AACTTCCGCACTTCTGCAGT+AGG | 0.586898 | 1.3:-76740831 | None:intergenic |
| TTATCTGCTGCACCGAGACA+AGG | 0.587214 | 1.3:-76738331 | None:intergenic |
| GTTTATACCCATGCAAGACC+TGG | 0.588423 | 1.3:-76750909 | None:intergenic |
| CATAATTCAGACCCAGACAT+TGG | 0.589201 | 1.3:+76745831 | MS.gene056274:CDS |
| AGTGTTGTTGTTCAAACTGG+AGG | 0.589586 | 1.3:+76738385 | MS.gene056274:CDS |
| TTAGGCTTACTGGAATAAGA+CGG | 0.590304 | 1.3:-76742236 | None:intergenic |
| GGACCAGTGTATGTCTGCAT+TGG | 0.592264 | 1.3:+76751185 | MS.gene056274:CDS |
| TGCCACCGTTAATTGAGAAG+TGG | 0.593114 | 1.3:+76745185 | MS.gene056274:CDS |
| TCAGCAAATTGAGTGAATCC+GGG | 0.593150 | 1.3:-76745784 | None:intergenic |
| TTTCCAACCATCATCTCCGA+CGG | 0.597210 | 1.3:-76743228 | None:intergenic |
| AATCATATTAAAGCACCTGA+TGG | 0.597348 | 1.3:+76744795 | MS.gene056274:CDS |
| TATGGCACCAAGTGCCAAGA+CGG | 0.600274 | 1.3:-76743264 | None:intergenic |
| TGCAATGGATGCATTATCCA+AGG | 0.601884 | 1.3:+76738483 | MS.gene056274:CDS |
| GAAAATAGTGCAATAACACT+GGG | 0.602429 | 1.3:+76749519 | MS.gene056274:CDS |
| TGAACAGGGAATTTCTGTGG+AGG | 0.603671 | 1.3:+76738210 | MS.gene056274:intron |
| AAACACATAAGGTCTACGAC+TGG | 0.605568 | 1.3:+76738352 | MS.gene056274:CDS |
| CACTTGGTGCCATAGGCGAG+GGG | 0.605861 | 1.3:+76743273 | MS.gene056274:CDS |
| GTGATTTGGCTAGGTGTGTG+TGG | 0.606145 | 1.3:+76747276 | MS.gene056274:intron |
| CAAGGACGCAGATGAAGAAG+TGG | 0.606775 | 1.3:+76741742 | MS.gene056274:CDS |
| CAGCATCATATACAATTCTG+AGG | 0.609698 | 1.3:-76745004 | None:intergenic |
| CACGGGAGAAGATGAAGATG+AGG | 0.610536 | 1.3:-76737242 | None:intergenic |
| ACATTAAACTTACTCGAGCA+AGG | 0.610835 | 1.3:-76747048 | None:intergenic |
| TGATAATAAGCGTGTACAGG+AGG | 0.610882 | 1.3:+76744606 | MS.gene056274:CDS |
| ATGACGATGTTGTCAACACA+TGG | 0.610953 | 1.3:+76742816 | MS.gene056274:CDS |
| TCGATCACATTCCTTAGATG+TGG | 0.611334 | 1.3:-76741701 | None:intergenic |
| GCTCCAATGCAGACATACAC+TGG | 0.614134 | 1.3:-76751188 | None:intergenic |
| TGATACGAAGTATTTCATGC+TGG | 0.614417 | 1.3:+76744020 | MS.gene056274:CDS |
| AGTGATTTAAATCACATGGA+AGG | 0.616174 | 1.3:+76738460 | MS.gene056274:CDS |
| GTCCAAACCTCCAAGATAGA+CGG | 0.620276 | 1.3:-76741280 | None:intergenic |
| ACTTCCGCACTTCTGCAGTA+GGG | 0.623309 | 1.3:-76740830 | None:intergenic |
| TGTTGCAAAAGCAGAACAAG+CGG | 0.625501 | 1.3:-76744629 | None:intergenic |
| CAATAGGCATCAGAGTAGGA+AGG | 0.628208 | 1.3:-76742901 | None:intergenic |
| TAGGGTATCGGGCATCCCAA+GGG | 0.630072 | 1.3:+76744532 | MS.gene056274:intron |
| AACCTTGATACATGAAATCG+AGG | 0.630250 | 1.3:-76742601 | None:intergenic |
| AAGTCTGCCAGGTCTTGCAT+GGG | 0.631867 | 1.3:+76750902 | MS.gene056274:CDS |
| AGCTGGGGCTCAGTATGACA+AGG | 0.634404 | 1.3:+76746059 | MS.gene056274:CDS |
| TCGTGGCAACCACAAGAGCA+AGG | 0.637116 | 1.3:+76737099 | MS.gene056274:CDS |
| TAGAACCTTAGCCAATGTCT+GGG | 0.646402 | 1.3:-76745842 | None:intergenic |
| AGCTTTCTTAATGAAGCGTG+AGG | 0.646529 | 1.3:-76740608 | None:intergenic |
| CAGGCCAAGTTGTCAACCGT+CGG | 0.648622 | 1.3:+76743212 | MS.gene056274:intron |
| TGCATGAAATGCTCCATATG+TGG | 0.649161 | 1.3:-76749576 | None:intergenic |
| TGAATCGCTTATTGAAGCCG+AGG | 0.649193 | 1.3:+76742370 | MS.gene056274:CDS |
| TTTATGCACCTCCTAAACAC+AGG | 0.650495 | 1.3:-76745808 | None:intergenic |
| ACCAATTCTTCAGCATGCAG+AGG | 0.652188 | 1.3:+76749393 | MS.gene056274:CDS |
| AGAATGAAGATACCTGAGCA+CGG | 0.654486 | 1.3:-76737260 | None:intergenic |
| GTATATGTTGCAAGTCAACA+AGG | 0.659849 | 1.3:+76741724 | MS.gene056274:CDS |
| CAAGAATTTCAGACAAACGA+GGG | 0.660281 | 1.3:-76747309 | None:intergenic |
| TTTGCTTTCTGGACTAACAG+AGG | 0.661941 | 1.3:+76746104 | MS.gene056274:CDS |
| TCAACAATAGGCATCAGAGT+AGG | 0.667528 | 1.3:-76742905 | None:intergenic |
| TCAAGAATTTCAGACAAACG+AGG | 0.668611 | 1.3:-76747310 | None:intergenic |
| GGTGCATCAGGCTATTTCCG+TGG | 0.668981 | 1.3:+76747442 | MS.gene056274:CDS |
| CATGAAATACTTCGTATCAG+GGG | 0.669623 | 1.3:-76744016 | None:intergenic |
| AGCGAACTTAGAGCTCCAGA+AGG | 0.670498 | 1.3:-76750734 | None:intergenic |
| ATAGTGCAATAACACTGGGG+AGG | 0.677121 | 1.3:+76749523 | MS.gene056274:CDS |
| TGCCACTTCTCAATTAACGG+TGG | 0.677949 | 1.3:-76745187 | None:intergenic |
| ACTGTCCAAGCAACTTACAA+GGG | 0.681669 | 1.3:-76738437 | None:intergenic |
| TATATCTGAAGAATAACCTG+AGG | 0.683811 | 1.3:+76738251 | MS.gene056274:CDS |
| ACATCGGTGTCAAGAATTTG+GGG | 0.688752 | 1.3:-76740421 | None:intergenic |
| TTTAATATGATTTCCAAGCG+CGG | 0.689897 | 1.3:-76744784 | None:intergenic |
| TCTTTATCCTCATCTGCCAG+AGG | 0.693093 | 1.3:+76743307 | MS.gene056274:CDS |
| ATGACCCTACTGCAGAAGTG+CGG | 0.693454 | 1.3:+76740826 | MS.gene056274:CDS |
| ATGTACCAGGCTTAGCAGAG+CGG | 0.696873 | 1.3:+76740440 | MS.gene056274:CDS |
| AAACCTCCAAGATAGACGGA+CGG | 0.697580 | 1.3:-76741276 | None:intergenic |
| ATTGACAGAGCATTGCACCA+AGG | 0.701124 | 1.3:-76749600 | None:intergenic |
| CGGCGGCGGTGACACCATCG+TGG | 0.714804 | 1.3:+76737082 | MS.gene056274:CDS |
| AGGCTTACTGGAATAAGACG+GGG | 0.733611 | 1.3:-76742234 | None:intergenic |
| CCAAATCTGAGACTTATCAG+CGG | 0.743479 | 1.3:-76737175 | None:intergenic |
| AAAATAGTGCAATAACACTG+GGG | 0.776697 | 1.3:+76749520 | MS.gene056274:CDS |
| AAACTGGAGGAGTTTCACAG+TGG | 0.779982 | 1.3:+76738398 | MS.gene056274:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76737078 | 76751248 | 76737078 | ID=MS.gene056274 |
| chr1.3 | mRNA | 76737078 | 76751248 | 76737078 | ID=MS.gene056274.t1;Parent=MS.gene056274 |
| chr1.3 | exon | 76737078 | 76737269 | 76737078 | ID=MS.gene056274.t1.exon1;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76737078 | 76737269 | 76737078 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76738217 | 76738504 | 76738217 | ID=MS.gene056274.t1.exon2;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76738217 | 76738504 | 76738217 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76740406 | 76740495 | 76740406 | ID=MS.gene056274.t1.exon3;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76740406 | 76740495 | 76740406 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76740596 | 76740673 | 76740596 | ID=MS.gene056274.t1.exon4;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76740596 | 76740673 | 76740596 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76740774 | 76740854 | 76740774 | ID=MS.gene056274.t1.exon5;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76740774 | 76740854 | 76740774 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76741244 | 76741294 | 76741244 | ID=MS.gene056274.t1.exon6;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76741244 | 76741294 | 76741244 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76741701 | 76741786 | 76741701 | ID=MS.gene056274.t1.exon7;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76741701 | 76741786 | 76741701 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76742182 | 76742248 | 76742182 | ID=MS.gene056274.t1.exon8;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76742182 | 76742248 | 76742182 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76742335 | 76742391 | 76742335 | ID=MS.gene056274.t1.exon9;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76742335 | 76742391 | 76742335 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76742488 | 76742517 | 76742488 | ID=MS.gene056274.t1.exon10;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76742488 | 76742517 | 76742488 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76742592 | 76742651 | 76742592 | ID=MS.gene056274.t1.exon11;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76742592 | 76742651 | 76742592 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76742812 | 76742928 | 76742812 | ID=MS.gene056274.t1.exon12;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76742812 | 76742928 | 76742812 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76743215 | 76743328 | 76743215 | ID=MS.gene056274.t1.exon13;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76743215 | 76743328 | 76743215 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76743977 | 76744075 | 76743977 | ID=MS.gene056274.t1.exon14;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76743977 | 76744075 | 76743977 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76744535 | 76744660 | 76744535 | ID=MS.gene056274.t1.exon15;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76744535 | 76744660 | 76744535 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76744763 | 76744837 | 76744763 | ID=MS.gene056274.t1.exon16;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76744763 | 76744837 | 76744763 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76744996 | 76745067 | 76744996 | ID=MS.gene056274.t1.exon17;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76744996 | 76745067 | 76744996 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76745163 | 76745273 | 76745163 | ID=MS.gene056274.t1.exon18;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76745163 | 76745273 | 76745163 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76745775 | 76745858 | 76745775 | ID=MS.gene056274.t1.exon19;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76745775 | 76745858 | 76745775 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76746045 | 76746152 | 76746045 | ID=MS.gene056274.t1.exon20;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76746045 | 76746152 | 76746045 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76746956 | 76747057 | 76746956 | ID=MS.gene056274.t1.exon21;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76746956 | 76747057 | 76746956 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76747289 | 76747351 | 76747289 | ID=MS.gene056274.t1.exon22;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76747289 | 76747351 | 76747289 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76747431 | 76747505 | 76747431 | ID=MS.gene056274.t1.exon23;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76747431 | 76747505 | 76747431 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76749343 | 76749414 | 76749343 | ID=MS.gene056274.t1.exon24;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76749343 | 76749414 | 76749343 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76749498 | 76749622 | 76749498 | ID=MS.gene056274.t1.exon25;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76749498 | 76749622 | 76749498 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76750587 | 76750638 | 76750587 | ID=MS.gene056274.t1.exon26;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76750587 | 76750638 | 76750587 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76750722 | 76750790 | 76750722 | ID=MS.gene056274.t1.exon27;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76750722 | 76750790 | 76750722 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76750874 | 76750933 | 76750874 | ID=MS.gene056274.t1.exon28;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76750874 | 76750933 | 76750874 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| chr1.3 | exon | 76751165 | 76751248 | 76751165 | ID=MS.gene056274.t1.exon29;Parent=MS.gene056274.t1 |
| chr1.3 | CDS | 76751165 | 76751248 | 76751165 | ID=cds.MS.gene056274.t1;Parent=MS.gene056274.t1 |
| Gene Sequence |
| Protein sequence |