Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056358.t1 | KEH30293.1 | 98.6 | 295 | 4 | 0 | 1 | 295 | 84 | 378 | 1.10E-171 | 612.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056358.t1 | P26205 | 71.0 | 293 | 85 | 0 | 1 | 293 | 70 | 362 | 4.6e-126 | 452.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056358.t1 | A0A072UMK1 | 98.6 | 295 | 4 | 0 | 1 | 295 | 84 | 378 | 7.9e-172 | 612.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056358 | MS.gene056359 | 0.916824 | 1.12E-85 | -1.69E-46 |
| MS.gene056358 | MS.gene071858 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene056358 | MS.gene54577 | 0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene056358 | MS.gene63444 | 0.816749 | 4.71E-52 | -1.69E-46 |
| MS.gene056358 | MS.gene81505 | 0.806907 | 6.55E-50 | -1.69E-46 |
| MS.gene056358 | MS.gene81506 | 0.808389 | 3.17E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056358.t1 | MTR_4g066580 | 97.651 | 298 | 7 | 0 | 1 | 298 | 84 | 381 | 0.0 | 608 |
| MS.gene056358.t1 | MTR_4g066580 | 97.651 | 298 | 7 | 0 | 1 | 298 | 84 | 381 | 0.0 | 607 |
| MS.gene056358.t1 | MTR_3g028720 | 91.525 | 295 | 25 | 0 | 1 | 295 | 83 | 377 | 0.0 | 575 |
| MS.gene056358.t1 | MTR_3g028720 | 91.525 | 295 | 25 | 0 | 1 | 295 | 83 | 377 | 0.0 | 575 |
| MS.gene056358.t1 | MTR_3g028720 | 91.525 | 295 | 25 | 0 | 1 | 295 | 83 | 377 | 0.0 | 575 |
| MS.gene056358.t1 | MTR_3g028720 | 91.525 | 295 | 25 | 0 | 1 | 295 | 83 | 377 | 0.0 | 574 |
| MS.gene056358.t1 | MTR_4g067040 | 80.756 | 291 | 56 | 0 | 1 | 291 | 79 | 369 | 0.0 | 513 |
| MS.gene056358.t1 | MTR_4g067040 | 80.756 | 291 | 56 | 0 | 1 | 291 | 79 | 369 | 0.0 | 513 |
| MS.gene056358.t1 | MTR_4g066590 | 80.412 | 291 | 57 | 0 | 1 | 291 | 78 | 368 | 0.0 | 509 |
| MS.gene056358.t1 | MTR_4g066630 | 77.152 | 302 | 66 | 1 | 1 | 302 | 84 | 382 | 0.0 | 507 |
| MS.gene056358.t1 | MTR_4g066630 | 78.157 | 293 | 64 | 0 | 1 | 293 | 84 | 376 | 5.44e-179 | 501 |
| MS.gene056358.t1 | MTR_4g066630 | 78.157 | 293 | 64 | 0 | 1 | 293 | 84 | 376 | 1.71e-178 | 501 |
| MS.gene056358.t1 | MTR_4g066630 | 78.157 | 293 | 64 | 0 | 1 | 293 | 84 | 376 | 2.00e-177 | 501 |
| MS.gene056358.t1 | MTR_6g078450 | 75.000 | 292 | 73 | 0 | 1 | 292 | 81 | 372 | 6.46e-170 | 479 |
| MS.gene056358.t1 | MTR_6g078450 | 75.000 | 292 | 73 | 0 | 1 | 292 | 81 | 372 | 1.08e-168 | 478 |
| MS.gene056358.t1 | MTR_2g098540 | 74.744 | 293 | 74 | 0 | 1 | 293 | 32 | 324 | 5.28e-168 | 474 |
| MS.gene056358.t1 | MTR_2g098540 | 74.744 | 293 | 74 | 0 | 1 | 293 | 76 | 368 | 1.30e-167 | 475 |
| MS.gene056358.t1 | MTR_2g098790 | 73.379 | 293 | 78 | 0 | 1 | 293 | 83 | 375 | 1.59e-165 | 470 |
| MS.gene056358.t1 | MTR_2g098520 | 73.379 | 293 | 78 | 0 | 1 | 293 | 79 | 371 | 4.19e-164 | 466 |
| MS.gene056358.t1 | MTR_6g078330 | 71.717 | 297 | 84 | 0 | 5 | 301 | 86 | 382 | 1.92e-162 | 457 |
| MS.gene056358.t1 | MTR_4g066210 | 71.331 | 293 | 84 | 0 | 1 | 293 | 88 | 380 | 2.03e-162 | 462 |
| MS.gene056358.t1 | MTR_6g078380 | 71.429 | 294 | 83 | 1 | 1 | 293 | 81 | 374 | 3.10e-160 | 457 |
| MS.gene056358.t1 | MTR_6g078330 | 73.264 | 288 | 77 | 0 | 5 | 292 | 86 | 373 | 1.01e-159 | 456 |
| MS.gene056358.t1 | MTR_4g066240 | 70.648 | 293 | 86 | 0 | 1 | 293 | 81 | 373 | 5.24e-159 | 450 |
| MS.gene056358.t1 | MTR_4g066340 | 70.990 | 293 | 85 | 0 | 1 | 293 | 8 | 300 | 1.48e-158 | 449 |
| MS.gene056358.t1 | MTR_4g066240 | 70.648 | 293 | 86 | 0 | 1 | 293 | 81 | 373 | 8.62e-158 | 450 |
| MS.gene056358.t1 | MTR_4g066240 | 70.648 | 293 | 86 | 0 | 1 | 293 | 81 | 373 | 1.01e-157 | 450 |
| MS.gene056358.t1 | MTR_4g066640 | 67.893 | 299 | 92 | 2 | 1 | 298 | 84 | 379 | 6.35e-152 | 431 |
| MS.gene056358.t1 | MTR_4g066640 | 67.893 | 299 | 92 | 2 | 1 | 298 | 84 | 379 | 1.14e-149 | 430 |
| MS.gene056358.t1 | MTR_6g078330 | 72.862 | 269 | 73 | 0 | 24 | 292 | 1 | 269 | 2.55e-149 | 425 |
| MS.gene056358.t1 | MTR_5g071520 | 69.205 | 302 | 84 | 1 | 1 | 293 | 84 | 385 | 1.66e-145 | 419 |
| MS.gene056358.t1 | MTR_3g026280 | 62.116 | 293 | 110 | 1 | 1 | 293 | 67 | 358 | 3.13e-136 | 395 |
| MS.gene056358.t1 | MTR_6g078330 | 70.039 | 257 | 75 | 1 | 36 | 292 | 15 | 269 | 1.97e-134 | 387 |
| MS.gene056358.t1 | MTR_4g023000 | 57.807 | 301 | 117 | 3 | 5 | 305 | 73 | 363 | 4.99e-127 | 371 |
| MS.gene056358.t1 | MTR_4g066330 | 60.678 | 295 | 88 | 2 | 1 | 293 | 86 | 354 | 1.74e-126 | 370 |
| MS.gene056358.t1 | MTR_4g066280 | 59.524 | 294 | 91 | 2 | 1 | 292 | 86 | 353 | 4.40e-125 | 367 |
| MS.gene056358.t1 | MTR_3g026400 | 60.440 | 273 | 105 | 2 | 1 | 273 | 82 | 351 | 2.93e-121 | 352 |
| MS.gene056358.t1 | MTR_3g026400 | 60.440 | 273 | 105 | 2 | 1 | 273 | 51 | 320 | 2.91e-119 | 351 |
| MS.gene056358.t1 | MTR_3g026400 | 60.440 | 273 | 105 | 2 | 1 | 273 | 82 | 351 | 5.30e-119 | 352 |
| MS.gene056358.t1 | MTR_3g026620 | 57.679 | 293 | 120 | 3 | 1 | 293 | 83 | 371 | 2.35e-115 | 342 |
| MS.gene056358.t1 | MTR_4g083000 | 53.716 | 296 | 133 | 2 | 1 | 296 | 72 | 363 | 3.32e-115 | 342 |
| MS.gene056358.t1 | MTR_4g015420 | 58.696 | 276 | 88 | 3 | 1 | 276 | 109 | 358 | 1.26e-112 | 336 |
| MS.gene056358.t1 | MTR_5g044000 | 56.044 | 273 | 118 | 1 | 1 | 273 | 90 | 360 | 7.31e-112 | 333 |
| MS.gene056358.t1 | MTR_2g043200 | 57.401 | 277 | 92 | 2 | 1 | 277 | 109 | 359 | 5.67e-106 | 318 |
| MS.gene056358.t1 | MTR_4g015460 | 56.884 | 276 | 93 | 3 | 1 | 276 | 86 | 335 | 6.03e-106 | 318 |
| MS.gene056358.t1 | MTR_0110s0040 | 50.492 | 305 | 148 | 2 | 1 | 305 | 87 | 388 | 7.41e-105 | 312 |
| MS.gene056358.t1 | MTR_4g081530 | 54.182 | 275 | 124 | 1 | 1 | 275 | 68 | 340 | 2.34e-104 | 314 |
| MS.gene056358.t1 | MTR_4g083000 | 53.846 | 273 | 122 | 2 | 24 | 296 | 1 | 269 | 3.06e-104 | 310 |
| MS.gene056358.t1 | MTR_7g068910 | 52.536 | 276 | 129 | 1 | 6 | 281 | 80 | 353 | 5.07e-104 | 313 |
| MS.gene056358.t1 | MTR_5g068740 | 50.000 | 302 | 141 | 4 | 4 | 300 | 72 | 368 | 2.19e-103 | 311 |
| MS.gene056358.t1 | MTR_4g016920 | 51.389 | 288 | 137 | 2 | 6 | 292 | 76 | 361 | 4.50e-103 | 311 |
| MS.gene056358.t1 | MTR_2g079580 | 50.694 | 288 | 136 | 3 | 1 | 284 | 76 | 361 | 8.90e-102 | 304 |
| MS.gene056358.t1 | MTR_0110s0040 | 51.557 | 289 | 137 | 2 | 1 | 289 | 87 | 372 | 1.85e-101 | 307 |
| MS.gene056358.t1 | MTR_7g068910 | 50.699 | 286 | 129 | 2 | 6 | 281 | 80 | 363 | 8.60e-101 | 305 |
| MS.gene056358.t1 | MTR_2g079550 | 51.389 | 288 | 134 | 3 | 1 | 284 | 74 | 359 | 1.90e-100 | 305 |
| MS.gene056358.t1 | MTR_4g131810 | 50.903 | 277 | 134 | 2 | 1 | 276 | 73 | 348 | 2.26e-100 | 304 |
| MS.gene056358.t1 | MTR_2g079580 | 50.694 | 288 | 136 | 3 | 1 | 284 | 76 | 361 | 3.01e-100 | 304 |
| MS.gene056358.t1 | MTR_1g088610 | 52.174 | 276 | 123 | 3 | 4 | 275 | 72 | 342 | 7.00e-100 | 306 |
| MS.gene056358.t1 | MTR_0110s0030 | 49.827 | 289 | 142 | 2 | 1 | 289 | 87 | 372 | 5.52e-99 | 300 |
| MS.gene056358.t1 | MTR_7g068900 | 53.282 | 259 | 119 | 1 | 19 | 277 | 17 | 273 | 1.23e-98 | 299 |
| MS.gene056358.t1 | MTR_3g033810 | 51.095 | 274 | 123 | 2 | 1 | 274 | 65 | 327 | 2.11e-96 | 293 |
| MS.gene056358.t1 | MTR_4g016920 | 50.741 | 270 | 130 | 2 | 24 | 292 | 1 | 268 | 1.84e-95 | 285 |
| MS.gene056358.t1 | MTR_3g033790 | 50.365 | 274 | 125 | 2 | 1 | 274 | 63 | 325 | 3.14e-94 | 287 |
| MS.gene056358.t1 | MTR_4g016920 | 50.741 | 270 | 130 | 2 | 24 | 292 | 1 | 268 | 1.89e-93 | 283 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 8.36e-93 | 282 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 1.19e-92 | 281 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 1.20e-92 | 281 |
| MS.gene056358.t1 | MTR_2g022760 | 50.725 | 276 | 134 | 2 | 1 | 276 | 81 | 354 | 2.92e-92 | 283 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 3.05e-92 | 282 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 5.57e-92 | 281 |
| MS.gene056358.t1 | MTR_1g088630 | 50.362 | 276 | 104 | 5 | 4 | 275 | 72 | 318 | 1.56e-91 | 276 |
| MS.gene056358.t1 | MTR_4g131800 | 50.730 | 274 | 133 | 2 | 3 | 276 | 562 | 833 | 1.61e-91 | 293 |
| MS.gene056358.t1 | MTR_2g022710 | 49.638 | 276 | 137 | 2 | 1 | 276 | 79 | 352 | 1.80e-91 | 281 |
| MS.gene056358.t1 | MTR_1g088630 | 50.362 | 276 | 104 | 5 | 4 | 275 | 40 | 286 | 2.98e-90 | 276 |
| MS.gene056358.t1 | MTR_7g033860 | 49.270 | 274 | 126 | 4 | 3 | 273 | 95 | 358 | 6.38e-89 | 275 |
| MS.gene056358.t1 | MTR_0108s0030 | 43.750 | 304 | 151 | 2 | 3 | 292 | 50 | 347 | 6.50e-85 | 262 |
| MS.gene056358.t1 | MTR_1g088630 | 51.600 | 250 | 100 | 5 | 4 | 249 | 72 | 304 | 5.37e-82 | 250 |
| MS.gene056358.t1 | MTR_7g051610 | 48.763 | 283 | 138 | 3 | 11 | 293 | 123 | 398 | 2.07e-81 | 256 |
| MS.gene056358.t1 | MTR_2g022760 | 49.802 | 253 | 125 | 2 | 24 | 276 | 1 | 251 | 5.47e-80 | 249 |
| MS.gene056358.t1 | MTR_2g022710 | 48.221 | 253 | 129 | 2 | 24 | 276 | 1 | 251 | 2.16e-79 | 247 |
| MS.gene056358.t1 | MTR_7g051650 | 46.996 | 283 | 140 | 3 | 11 | 291 | 119 | 393 | 1.17e-77 | 246 |
| MS.gene056358.t1 | MTR_7g051650 | 46.996 | 283 | 140 | 3 | 11 | 291 | 123 | 397 | 1.51e-77 | 246 |
| MS.gene056358.t1 | MTR_7g051510 | 45.833 | 288 | 145 | 4 | 8 | 293 | 120 | 398 | 2.87e-76 | 243 |
| MS.gene056358.t1 | MTR_7g056747 | 46.743 | 261 | 132 | 2 | 18 | 277 | 9 | 263 | 6.64e-74 | 233 |
| MS.gene056358.t1 | MTR_0110s0020 | 52.174 | 184 | 85 | 2 | 1 | 184 | 87 | 267 | 2.18e-64 | 205 |
| MS.gene056358.t1 | MTR_8g038650 | 44.660 | 103 | 56 | 1 | 175 | 277 | 51 | 152 | 4.49e-24 | 96.3 |
| MS.gene056358.t1 | MTR_4g122980 | 26.316 | 266 | 151 | 8 | 20 | 278 | 183 | 410 | 1.22e-15 | 77.8 |
| MS.gene056358.t1 | MTR_7g028885 | 39.726 | 73 | 40 | 1 | 159 | 227 | 18 | 90 | 9.99e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056358.t1 | AT2G44480 | 59.732 | 298 | 119 | 1 | 1 | 298 | 80 | 376 | 1.69e-132 | 386 |
| MS.gene056358.t1 | AT2G44480 | 59.732 | 298 | 119 | 1 | 1 | 298 | 111 | 407 | 6.12e-132 | 386 |
| MS.gene056358.t1 | AT5G42260 | 61.151 | 278 | 107 | 1 | 1 | 277 | 76 | 353 | 7.28e-125 | 366 |
| MS.gene056358.t1 | AT2G25630 | 59.712 | 278 | 111 | 1 | 1 | 277 | 75 | 352 | 1.49e-124 | 365 |
| MS.gene056358.t1 | AT2G44450 | 59.643 | 280 | 113 | 0 | 1 | 280 | 76 | 355 | 1.63e-123 | 363 |
| MS.gene056358.t1 | AT5G44640 | 59.353 | 278 | 112 | 1 | 1 | 277 | 76 | 353 | 4.52e-123 | 362 |
| MS.gene056358.t1 | AT2G44480 | 59.636 | 275 | 110 | 1 | 24 | 298 | 1 | 274 | 5.33e-123 | 358 |
| MS.gene056358.t1 | AT3G60140 | 53.819 | 288 | 132 | 1 | 6 | 292 | 75 | 362 | 1.23e-119 | 351 |
| MS.gene056358.t1 | AT2G44480 | 61.569 | 255 | 97 | 1 | 1 | 255 | 111 | 364 | 8.63e-119 | 347 |
| MS.gene056358.t1 | AT3G60140 | 53.819 | 288 | 132 | 1 | 6 | 292 | 75 | 362 | 4.58e-118 | 351 |
| MS.gene056358.t1 | AT1G51470 | 56.122 | 294 | 120 | 4 | 1 | 292 | 87 | 373 | 4.62e-118 | 349 |
| MS.gene056358.t1 | AT1G47600 | 57.348 | 279 | 112 | 3 | 1 | 277 | 87 | 360 | 2.69e-117 | 347 |
| MS.gene056358.t1 | AT1G47600 | 57.348 | 279 | 112 | 3 | 1 | 277 | 87 | 360 | 2.71e-117 | 347 |
| MS.gene056358.t1 | AT3G60130 | 55.442 | 294 | 129 | 2 | 1 | 293 | 75 | 367 | 7.13e-116 | 343 |
| MS.gene056358.t1 | AT5G24550 | 54.035 | 285 | 130 | 1 | 6 | 289 | 81 | 365 | 6.21e-115 | 342 |
| MS.gene056358.t1 | AT2G44470 | 51.228 | 285 | 138 | 1 | 6 | 289 | 78 | 362 | 1.16e-111 | 329 |
| MS.gene056358.t1 | AT5G25980 | 51.890 | 291 | 139 | 1 | 3 | 293 | 95 | 384 | 3.51e-111 | 330 |
| MS.gene056358.t1 | AT5G25980 | 51.890 | 291 | 139 | 1 | 3 | 293 | 95 | 384 | 3.51e-111 | 330 |
| MS.gene056358.t1 | AT2G44470 | 51.228 | 285 | 138 | 1 | 6 | 289 | 78 | 362 | 3.86e-111 | 330 |
| MS.gene056358.t1 | AT5G25980 | 51.890 | 291 | 139 | 1 | 3 | 293 | 95 | 384 | 3.67e-110 | 330 |
| MS.gene056358.t1 | AT3G60120 | 53.979 | 289 | 131 | 2 | 5 | 292 | 62 | 349 | 1.73e-109 | 328 |
| MS.gene056358.t1 | AT5G54570 | 52.365 | 296 | 137 | 2 | 1 | 296 | 75 | 366 | 3.66e-109 | 324 |
| MS.gene056358.t1 | AT5G24540 | 54.035 | 285 | 130 | 1 | 6 | 289 | 81 | 365 | 3.92e-109 | 325 |
| MS.gene056358.t1 | AT2G44470 | 51.228 | 285 | 138 | 1 | 6 | 289 | 78 | 362 | 4.24e-109 | 329 |
| MS.gene056358.t1 | AT3G60130 | 54.874 | 277 | 123 | 2 | 18 | 293 | 40 | 315 | 4.45e-109 | 324 |
| MS.gene056358.t1 | AT1G26560 | 51.890 | 291 | 136 | 2 | 1 | 291 | 76 | 362 | 5.40e-109 | 326 |
| MS.gene056358.t1 | AT3G60130 | 54.874 | 277 | 123 | 2 | 18 | 293 | 40 | 315 | 1.08e-108 | 323 |
| MS.gene056358.t1 | AT5G26000 | 54.212 | 273 | 125 | 0 | 3 | 275 | 83 | 355 | 2.25e-108 | 323 |
| MS.gene056358.t1 | AT2G44490 | 52.721 | 294 | 137 | 2 | 1 | 293 | 59 | 351 | 2.93e-108 | 326 |
| MS.gene056358.t1 | AT5G54570 | 52.365 | 296 | 137 | 2 | 1 | 296 | 75 | 366 | 4.85e-108 | 324 |
| MS.gene056358.t1 | AT5G24540 | 54.035 | 285 | 130 | 1 | 6 | 289 | 81 | 365 | 9.94e-108 | 323 |
| MS.gene056358.t1 | AT5G26000 | 54.212 | 273 | 125 | 0 | 3 | 275 | 83 | 355 | 2.59e-107 | 323 |
| MS.gene056358.t1 | AT3G03640 | 49.653 | 288 | 141 | 2 | 6 | 290 | 84 | 370 | 8.86e-106 | 318 |
| MS.gene056358.t1 | AT2G32860 | 50.680 | 294 | 144 | 1 | 1 | 293 | 139 | 432 | 1.03e-104 | 318 |
| MS.gene056358.t1 | AT3G09260 | 50.173 | 289 | 140 | 3 | 6 | 292 | 84 | 370 | 3.49e-104 | 314 |
| MS.gene056358.t1 | AT2G32860 | 51.014 | 296 | 141 | 3 | 1 | 293 | 139 | 433 | 9.51e-104 | 316 |
| MS.gene056358.t1 | AT2G44460 | 52.632 | 285 | 133 | 2 | 6 | 289 | 78 | 361 | 1.57e-103 | 314 |
| MS.gene056358.t1 | AT3G18080 | 53.455 | 275 | 125 | 2 | 1 | 275 | 83 | 354 | 1.74e-102 | 309 |
| MS.gene056358.t1 | AT5G54570 | 53.480 | 273 | 123 | 2 | 24 | 296 | 1 | 269 | 1.10e-100 | 302 |
| MS.gene056358.t1 | AT1G75940 | 49.829 | 293 | 140 | 4 | 6 | 293 | 86 | 376 | 5.73e-100 | 303 |
| MS.gene056358.t1 | AT1G52400 | 48.980 | 294 | 144 | 4 | 3 | 293 | 85 | 375 | 8.55e-100 | 301 |
| MS.gene056358.t1 | AT1G02850 | 52.045 | 269 | 127 | 1 | 7 | 275 | 74 | 340 | 9.66e-100 | 302 |
| MS.gene056358.t1 | AT5G28510 | 48.822 | 297 | 143 | 4 | 3 | 292 | 85 | 379 | 2.09e-99 | 302 |
| MS.gene056358.t1 | AT1G52400 | 48.980 | 294 | 144 | 4 | 3 | 293 | 85 | 375 | 5.84e-99 | 301 |
| MS.gene056358.t1 | AT1G52400 | 48.980 | 294 | 144 | 4 | 3 | 293 | 85 | 375 | 5.84e-99 | 301 |
| MS.gene056358.t1 | AT3G21370 | 48.276 | 290 | 145 | 3 | 6 | 292 | 82 | 369 | 9.34e-99 | 300 |
| MS.gene056358.t1 | AT1G66280 | 50.853 | 293 | 135 | 5 | 4 | 292 | 83 | 370 | 1.37e-98 | 300 |
| MS.gene056358.t1 | AT1G66270 | 50.000 | 294 | 138 | 5 | 4 | 293 | 83 | 371 | 3.21e-98 | 299 |
| MS.gene056358.t1 | AT1G60090 | 51.111 | 270 | 129 | 2 | 2 | 271 | 65 | 331 | 1.22e-97 | 296 |
| MS.gene056358.t1 | AT1G60090 | 51.111 | 270 | 129 | 2 | 2 | 271 | 65 | 331 | 1.61e-97 | 296 |
| MS.gene056358.t1 | AT4G27830 | 50.000 | 272 | 134 | 1 | 6 | 277 | 71 | 340 | 1.18e-95 | 292 |
| MS.gene056358.t1 | AT1G02850 | 47.945 | 292 | 127 | 2 | 7 | 275 | 74 | 363 | 1.33e-95 | 289 |
| MS.gene056358.t1 | AT5G36890 | 53.091 | 275 | 117 | 3 | 1 | 274 | 60 | 323 | 4.56e-95 | 290 |
| MS.gene056358.t1 | AT1G51490 | 49.492 | 295 | 135 | 6 | 1 | 292 | 62 | 345 | 4.58e-95 | 287 |
| MS.gene056358.t1 | AT5G36890 | 53.091 | 275 | 117 | 3 | 1 | 274 | 60 | 323 | 4.77e-95 | 290 |
| MS.gene056358.t1 | AT1G66270 | 49.320 | 294 | 138 | 6 | 4 | 293 | 83 | 369 | 1.07e-94 | 290 |
| MS.gene056358.t1 | AT1G02850 | 47.945 | 292 | 127 | 2 | 7 | 275 | 74 | 363 | 1.53e-94 | 289 |
| MS.gene056358.t1 | AT1G02850 | 47.945 | 292 | 127 | 2 | 7 | 275 | 74 | 363 | 1.71e-94 | 289 |
| MS.gene056358.t1 | AT3G18070 | 46.996 | 283 | 145 | 3 | 1 | 283 | 74 | 351 | 1.55e-93 | 282 |
| MS.gene056358.t1 | AT4G22100 | 50.000 | 264 | 129 | 2 | 5 | 268 | 66 | 326 | 5.49e-93 | 285 |
| MS.gene056358.t1 | AT5G48375 | 47.405 | 289 | 129 | 2 | 3 | 291 | 74 | 339 | 5.99e-93 | 283 |
| MS.gene056358.t1 | AT1G60270 | 47.203 | 286 | 146 | 3 | 6 | 289 | 70 | 352 | 6.64e-93 | 280 |
| MS.gene056358.t1 | AT3G18070 | 46.996 | 283 | 139 | 3 | 1 | 283 | 74 | 345 | 3.03e-92 | 283 |
| MS.gene056358.t1 | AT4G21760 | 48.188 | 276 | 141 | 2 | 1 | 276 | 98 | 371 | 8.74e-92 | 283 |
| MS.gene056358.t1 | AT4G21760 | 48.188 | 276 | 141 | 2 | 1 | 276 | 98 | 371 | 1.79e-91 | 282 |
| MS.gene056358.t1 | AT3G18070 | 46.996 | 283 | 145 | 3 | 1 | 283 | 74 | 351 | 2.44e-91 | 280 |
| MS.gene056358.t1 | AT1G61820 | 47.653 | 277 | 142 | 3 | 1 | 276 | 75 | 349 | 1.44e-90 | 279 |
| MS.gene056358.t1 | AT3G62750 | 46.182 | 275 | 137 | 3 | 3 | 277 | 65 | 328 | 1.02e-89 | 272 |
| MS.gene056358.t1 | AT3G62750 | 46.182 | 275 | 137 | 3 | 3 | 277 | 65 | 328 | 1.02e-89 | 272 |
| MS.gene056358.t1 | AT4G27820 | 48.763 | 283 | 137 | 2 | 3 | 285 | 65 | 339 | 2.29e-89 | 275 |
| MS.gene056358.t1 | AT1G45191 | 46.667 | 270 | 141 | 2 | 6 | 275 | 74 | 340 | 6.06e-89 | 271 |
| MS.gene056358.t1 | AT1G45191 | 46.667 | 270 | 141 | 2 | 6 | 275 | 74 | 340 | 6.57e-89 | 271 |
| MS.gene056358.t1 | AT3G62750 | 45.818 | 275 | 138 | 2 | 3 | 277 | 91 | 354 | 1.55e-88 | 271 |
| MS.gene056358.t1 | AT1G02850 | 49.071 | 269 | 108 | 2 | 7 | 275 | 74 | 313 | 3.21e-88 | 271 |
| MS.gene056358.t1 | AT3G62750 | 46.182 | 275 | 137 | 3 | 3 | 277 | 91 | 354 | 4.43e-88 | 271 |
| MS.gene056358.t1 | AT1G45191 | 47.909 | 263 | 134 | 2 | 6 | 268 | 74 | 333 | 6.97e-88 | 271 |
| MS.gene056358.t1 | AT1G45191 | 47.909 | 263 | 134 | 2 | 6 | 268 | 74 | 333 | 7.50e-88 | 272 |
| MS.gene056358.t1 | AT1G45191 | 47.909 | 263 | 134 | 2 | 6 | 268 | 74 | 333 | 1.03e-87 | 271 |
| MS.gene056358.t1 | AT3G62750 | 46.182 | 275 | 137 | 3 | 3 | 277 | 65 | 328 | 1.11e-87 | 271 |
| MS.gene056358.t1 | AT1G45191 | 47.909 | 263 | 134 | 2 | 6 | 268 | 86 | 345 | 1.41e-87 | 271 |
| MS.gene056358.t1 | AT3G62750 | 46.182 | 275 | 137 | 3 | 3 | 277 | 91 | 354 | 2.06e-87 | 271 |
| MS.gene056358.t1 | AT1G61810 | 46.643 | 283 | 146 | 4 | 1 | 282 | 78 | 356 | 7.67e-87 | 266 |
| MS.gene056358.t1 | AT3G62740 | 43.750 | 288 | 153 | 4 | 5 | 289 | 68 | 349 | 4.98e-86 | 265 |
| MS.gene056358.t1 | AT4G27830 | 48.819 | 254 | 128 | 1 | 24 | 277 | 1 | 252 | 6.01e-86 | 264 |
| MS.gene056358.t1 | AT1G61810 | 46.643 | 283 | 146 | 4 | 1 | 282 | 78 | 356 | 1.56e-85 | 267 |
| MS.gene056358.t1 | AT1G61810 | 46.643 | 283 | 146 | 4 | 1 | 282 | 78 | 356 | 1.68e-85 | 266 |
| MS.gene056358.t1 | AT3G62740 | 43.750 | 288 | 153 | 4 | 5 | 289 | 68 | 349 | 7.53e-85 | 264 |
| MS.gene056358.t1 | AT2G44450 | 57.353 | 204 | 87 | 0 | 77 | 280 | 1 | 204 | 1.82e-83 | 256 |
| MS.gene056358.t1 | AT1G60270 | 45.896 | 268 | 140 | 3 | 24 | 289 | 1 | 265 | 2.26e-83 | 253 |
| MS.gene056358.t1 | AT4G27820 | 47.328 | 262 | 130 | 2 | 24 | 285 | 1 | 254 | 7.78e-79 | 246 |
| MS.gene056358.t1 | AT4G27820 | 47.328 | 262 | 130 | 2 | 24 | 285 | 1 | 254 | 7.78e-79 | 246 |
| MS.gene056358.t1 | AT1G61810 | 47.308 | 260 | 132 | 4 | 24 | 282 | 1 | 256 | 2.85e-78 | 244 |
| MS.gene056358.t1 | AT3G62750 | 44.094 | 254 | 131 | 3 | 24 | 277 | 1 | 243 | 7.22e-76 | 238 |
| MS.gene056358.t1 | AT3G62750 | 44.094 | 254 | 131 | 3 | 24 | 277 | 1 | 243 | 7.22e-76 | 238 |
| MS.gene056358.t1 | AT1G61810 | 48.000 | 225 | 115 | 2 | 1 | 225 | 78 | 300 | 5.88e-73 | 227 |
| MS.gene056358.t1 | AT2G44460 | 50.926 | 216 | 104 | 2 | 75 | 289 | 1 | 215 | 1.06e-67 | 218 |
| MS.gene056358.t1 | AT1G61820 | 44.076 | 211 | 116 | 2 | 67 | 276 | 1 | 210 | 6.10e-61 | 198 |
| MS.gene056358.t1 | AT2G44480 | 53.012 | 166 | 77 | 1 | 133 | 298 | 6 | 170 | 2.67e-58 | 189 |
| MS.gene056358.t1 | AT3G18070 | 47.458 | 177 | 92 | 1 | 107 | 283 | 99 | 274 | 1.77e-55 | 183 |
| MS.gene056358.t1 | AT3G18070 | 47.458 | 177 | 92 | 1 | 107 | 283 | 99 | 274 | 2.28e-54 | 182 |
| MS.gene056358.t1 | AT3G18070 | 46.626 | 163 | 86 | 1 | 121 | 283 | 1 | 162 | 8.58e-50 | 165 |
| MS.gene056358.t1 | AT3G18070 | 46.626 | 163 | 86 | 1 | 121 | 283 | 1 | 162 | 2.12e-48 | 164 |
| MS.gene056358.t1 | AT5G16580 | 44.253 | 174 | 91 | 2 | 96 | 268 | 21 | 189 | 1.91e-41 | 145 |
| MS.gene056358.t1 | AT3G06510 | 28.497 | 193 | 119 | 6 | 19 | 202 | 159 | 341 | 1.11e-15 | 77.8 |
| MS.gene056358.t1 | AT3G06510 | 28.497 | 193 | 119 | 6 | 19 | 202 | 159 | 341 | 1.12e-15 | 77.8 |
Find 68 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATTTATTTCAGGTTTA+TGG | 0.091209 | 4.1:+34374953 | MS.gene056358:intron |
| GTTTGCTTTGTATTGAATTT+TGG | 0.170509 | 4.1:-34375035 | None:intergenic |
| GAACTTTGTTTCAAGGAATT+TGG | 0.185925 | 4.1:+34374519 | MS.gene056358:CDS |
| GCCCATTTGCATAGCCATTT+TGG | 0.215929 | 4.1:-34374590 | None:intergenic |
| TAAATTATAGAGTTGTAAAA+TGG | 0.236787 | 4.1:-34375199 | None:intergenic |
| GAATCACCTCCGGTACAATT+TGG | 0.240733 | 4.1:-34374648 | None:intergenic |
| AACGAGGGCTCTCATGCTTT+TGG | 0.246670 | 4.1:-34375000 | None:intergenic |
| GAATCTCAAAAGGGCGTAAT+AGG | 0.263108 | 4.1:+34374753 | MS.gene056358:CDS |
| TAGTTACTTAACAGATTCTT+TGG | 0.293237 | 4.1:+34375151 | MS.gene056358:CDS |
| CATAATTAATTACCTTGTAT+TGG | 0.343752 | 4.1:-34373776 | None:intergenic |
| CCATGGAGCTACAGCCAAAA+TGG | 0.357660 | 4.1:+34374576 | MS.gene056358:CDS |
| CACCGGGTCGTTGTTCTAGT+TGG | 0.362390 | 4.1:+34374619 | MS.gene056358:CDS |
| TTCTGCGATCGAGCCCTATT+TGG | 0.366482 | 4.1:+34374668 | MS.gene056358:CDS |
| TTGGTAATGCGTCACCAAAT+AGG | 0.368746 | 4.1:-34374682 | None:intergenic |
| CTATGCAGAACTTTGTTTCA+AGG | 0.382893 | 4.1:+34374512 | MS.gene056358:CDS |
| TGGTAATGCGTCACCAAATA+GGG | 0.384305 | 4.1:-34374681 | None:intergenic |
| TGCAAATGGGCGAATGGCAC+CGG | 0.395385 | 4.1:+34374602 | MS.gene056358:CDS |
| AGCCAAAATGGCTATGCAAA+TGG | 0.396136 | 4.1:+34374588 | MS.gene056358:CDS |
| TTTGGTCAATCCAGCATGTA+AGG | 0.402942 | 4.1:+34375169 | MS.gene056358:CDS |
| CAATATTCTAGACCAGGATA+TGG | 0.406678 | 4.1:-34373990 | None:intergenic |
| ATCAATGAGTTACTAGCTAA+TGG | 0.410732 | 4.1:+34374191 | MS.gene056358:CDS |
| TACTCTTCTTCTAAAGTTTG+AGG | 0.419592 | 4.1:-34374353 | None:intergenic |
| GGATAATCTCCTGATGTTAG+TGG | 0.423615 | 4.1:-34374978 | None:intergenic |
| TTGGATACTCACACTATAAG+AGG | 0.423919 | 4.1:-34374392 | None:intergenic |
| TGGTGATCGAGTCAAGTATT+GGG | 0.429807 | 4.1:+34374539 | MS.gene056358:CDS |
| TATAGAGTTGTAAAATGGAT+TGG | 0.437561 | 4.1:-34375194 | None:intergenic |
| GCATAACCTTAGTAGCGAAT+TGG | 0.439687 | 4.1:+34374775 | MS.gene056358:CDS |
| CAAACTTTAGAAGAAGAGTA+TGG | 0.448230 | 4.1:+34374356 | MS.gene056358:CDS |
| AAAGTACAAAGAATCTCAAA+AGG | 0.451454 | 4.1:+34374743 | MS.gene056358:CDS |
| ACTCTTCTTCTAAAGTTTGA+GGG | 0.459763 | 4.1:-34374352 | None:intergenic |
| AAGCAAACTAAACTACTCAT+TGG | 0.461970 | 4.1:+34375050 | MS.gene056358:CDS |
| GCCAAAATGGCTATGCAAAT+GGG | 0.463040 | 4.1:+34374589 | MS.gene056358:CDS |
| TTGGTGATCGAGTCAAGTAT+TGG | 0.467483 | 4.1:+34374538 | MS.gene056358:CDS |
| TGGATTGGTTCCTTACATGC+TGG | 0.470519 | 4.1:-34375179 | None:intergenic |
| AAGATCAAGGATGGAAGTAA+TGG | 0.472402 | 4.1:+34373729 | None:intergenic |
| CAAACAGATGGAAAGCTTAG+TGG | 0.481170 | 4.1:+34374128 | MS.gene056358:intron |
| AAGATACCAATTCGCTACTA+AGG | 0.501344 | 4.1:-34374781 | None:intergenic |
| CTGCGGCATGTGCAAGAAGT+TGG | 0.506216 | 4.1:-34374701 | None:intergenic |
| CAATGGAAAAGAGTCACTAA+TGG | 0.516481 | 4.1:-34374323 | None:intergenic |
| CATACAGATTCTCCATATCC+TGG | 0.518550 | 4.1:+34373978 | MS.gene056358:CDS |
| TTTATGGATCCACTAACATC+AGG | 0.523193 | 4.1:+34374969 | MS.gene056358:CDS |
| CTTGTACACATCAACGGCTG+CGG | 0.528888 | 4.1:-34374718 | None:intergenic |
| AAAGAATCTGTTAAGTAACT+AGG | 0.540529 | 4.1:-34375149 | None:intergenic |
| GGGTTACTTTGAATGAGCCA+TGG | 0.549157 | 4.1:+34374559 | MS.gene056358:CDS |
| TGAGAGCCCTCGTTGGTGCT+AGG | 0.551450 | 4.1:+34375009 | MS.gene056358:CDS |
| TGGTTGAATCCAAATTGTAC+CGG | 0.562770 | 4.1:+34374639 | MS.gene056358:CDS |
| AAAATCAATTGCTCTTTCTG+CGG | 0.568192 | 4.1:-34374835 | None:intergenic |
| GTATTGGTGATATGTGTCAA+TGG | 0.568938 | 4.1:-34373760 | None:intergenic |
| CATGCAGAAAAGATCAAGGA+TGG | 0.572632 | 4.1:+34373720 | None:intergenic |
| GCAAATGGGCGAATGGCACC+GGG | 0.577373 | 4.1:+34374603 | MS.gene056358:CDS |
| TGGCTATGCAAATGGGCGAA+TGG | 0.578351 | 4.1:+34374596 | MS.gene056358:CDS |
| CTCGATCGCAGAATCACCTC+CGG | 0.582972 | 4.1:-34374658 | None:intergenic |
| GGTTAACAATGGTGCATCAG+AGG | 0.590321 | 4.1:-34375117 | None:intergenic |
| AGTGGTGGTGTCAATCAAGA+AGG | 0.603295 | 4.1:+34374146 | MS.gene056358:CDS |
| AAGTACAAAGAATCTCAAAA+GGG | 0.604948 | 4.1:+34374744 | MS.gene056358:CDS |
| TAAGTAACTAGGTCTAGCAT+TGG | 0.612411 | 4.1:-34375138 | None:intergenic |
| ACTTGGCAATATTCTAGACC+AGG | 0.618905 | 4.1:-34373996 | None:intergenic |
| TTGAATCCAAATTGTACCGG+AGG | 0.632737 | 4.1:+34374642 | MS.gene056358:CDS |
| AAGTTTGAGGGAGATCCCAA+TGG | 0.634673 | 4.1:-34374340 | None:intergenic |
| AAAAGCATGAGAGCCCTCGT+TGG | 0.639097 | 4.1:+34375002 | MS.gene056358:CDS |
| TCGGATTTGGAATCTGAGAG+TGG | 0.644544 | 4.1:-34374804 | None:intergenic |
| GGTCTAGCATTGGTTAACAA+TGG | 0.647381 | 4.1:-34375128 | None:intergenic |
| TGACACATATCACCAATACA+AGG | 0.647732 | 4.1:+34373764 | MS.gene056358:CDS |
| AACCAACTAGAACAACGACC+CGG | 0.657075 | 4.1:-34374621 | None:intergenic |
| ACAGATGGAAAGCTTAGTGG+TGG | 0.663853 | 4.1:+34374131 | MS.gene056358:intron |
| ACTTTAGAAGAAGAGTATGG+TGG | 0.678058 | 4.1:+34374359 | MS.gene056358:CDS |
| TGGTAACCTAGCACCAACGA+GGG | 0.696965 | 4.1:-34375015 | None:intergenic |
| TTGGTAACCTAGCACCAACG+AGG | 0.706174 | 4.1:-34375016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAAATTTATTTATTTC+AGG | + | chr4.1:34374946-34374965 | MS.gene056358:intron | 10.0% |
| !! | AAAAAAAATTGAGAAATTTG+TGG | + | chr4.1:34374911-34374930 | MS.gene056358:intron | 15.0% |
| !! | AAAAAAGTCAGTAAAATAAA+TGG | - | chr4.1:34374233-34374252 | None:intergenic | 15.0% |
| !! | AACTTCAATATTATGTATAT+AGG | + | chr4.1:34373838-34373857 | MS.gene056358:intron | 15.0% |
| !!! | ATTTATTTATTTCAGGTTTA+TGG | + | chr4.1:34374953-34374972 | MS.gene056358:intron | 15.0% |
| !! | AATTGATTATCAATTATTGC+AGG | + | chr4.1:34374293-34374312 | MS.gene056358:intron | 20.0% |
| !! | CATAATTAATTACCTTGTAT+TGG | - | chr4.1:34373779-34373798 | None:intergenic | 20.0% |
| !! | TTCATCAACAAACATATATA+TGG | - | chr4.1:34374262-34374281 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATCCAAACAGA+TGG | + | chr4.1:34374116-34374135 | MS.gene056358:intron | 20.0% |
| !!! | ATTGGTTCATTTGATTTTAT+TGG | + | chr4.1:34375068-34375087 | MS.gene056358:CDS | 20.0% |
| ! | AAAGAATCTGTTAAGTAACT+AGG | - | chr4.1:34375152-34375171 | None:intergenic | 25.0% |
| ! | AAAGTACAAAGAATCTCAAA+AGG | + | chr4.1:34374743-34374762 | MS.gene056358:CDS | 25.0% |
| ! | AAGTACAAAGAATCTCAAAA+GGG | + | chr4.1:34374744-34374763 | MS.gene056358:CDS | 25.0% |
| ! | AGTCAAGTCAATATATATGA+TGG | + | chr4.1:34374020-34374039 | MS.gene056358:intron | 25.0% |
| ! | TAGTTACTTAACAGATTCTT+TGG | + | chr4.1:34375151-34375170 | MS.gene056358:CDS | 25.0% |
| ! | TATAGAGTTGTAAAATGGAT+TGG | - | chr4.1:34375197-34375216 | None:intergenic | 25.0% |
| ! | TTGTTCATCATGTGTATTAT+AGG | + | chr4.1:34373919-34373938 | MS.gene056358:intron | 25.0% |
| !! | GTTTGCTTTGTATTGAATTT+TGG | - | chr4.1:34375038-34375057 | None:intergenic | 25.0% |
| !!! | AGAGCAATTGATTTTATGTA+TGG | + | chr4.1:34374843-34374862 | MS.gene056358:CDS | 25.0% |
| !!! | ATATATTGACTTGACTTACT+TGG | - | chr4.1:34374016-34374035 | None:intergenic | 25.0% |
| !!! | CAATTGATTTTATGTATGGA+TGG | + | chr4.1:34374847-34374866 | MS.gene056358:CDS | 25.0% |
| AAAATCAATTGCTCTTTCTG+CGG | - | chr4.1:34374838-34374857 | None:intergenic | 30.0% | |
| AAGCAAACTAAACTACTCAT+TGG | + | chr4.1:34375050-34375069 | MS.gene056358:CDS | 30.0% | |
| ATCAATGAGTTACTAGCTAA+TGG | + | chr4.1:34374191-34374210 | MS.gene056358:CDS | 30.0% | |
| ! | ATTAGTGACTCTTTTCCATT+GGG | + | chr4.1:34374325-34374344 | MS.gene056358:CDS | 30.0% |
| ! | CAAACTTTAGAAGAAGAGTA+TGG | + | chr4.1:34374356-34374375 | MS.gene056358:CDS | 30.0% |
| ! | CTTTTTCTTGTACACATCAA+CGG | - | chr4.1:34374727-34374746 | None:intergenic | 30.0% |
| ! | GAACTTTGTTTCAAGGAATT+TGG | + | chr4.1:34374519-34374538 | MS.gene056358:CDS | 30.0% |
| ! | GAAGACAATAAGCTATGTTT+TGG | - | chr4.1:34374414-34374433 | None:intergenic | 30.0% |
| !! | ACTCTTCTTCTAAAGTTTGA+GGG | - | chr4.1:34374355-34374374 | None:intergenic | 30.0% |
| !! | TACTCTTCTTCTAAAGTTTG+AGG | - | chr4.1:34374356-34374375 | None:intergenic | 30.0% |
| AAGATACCAATTCGCTACTA+AGG | - | chr4.1:34374784-34374803 | None:intergenic | 35.0% | |
| CAATATTCTAGACCAGGATA+TGG | - | chr4.1:34373993-34374012 | None:intergenic | 35.0% | |
| CAATGGAAAAGAGTCACTAA+TGG | - | chr4.1:34374326-34374345 | None:intergenic | 35.0% | |
| TAAGTAACTAGGTCTAGCAT+TGG | - | chr4.1:34375141-34375160 | None:intergenic | 35.0% | |
| TGACACATATCACCAATACA+AGG | + | chr4.1:34373764-34373783 | MS.gene056358:CDS | 35.0% | |
| TGGTTGAATCCAAATTGTAC+CGG | + | chr4.1:34374639-34374658 | MS.gene056358:CDS | 35.0% | |
| TTGGATACTCACACTATAAG+AGG | - | chr4.1:34374395-34374414 | None:intergenic | 35.0% | |
| TTTATGGATCCACTAACATC+AGG | + | chr4.1:34374969-34374988 | MS.gene056358:CDS | 35.0% | |
| ! | ACTTTAGAAGAAGAGTATGG+TGG | + | chr4.1:34374359-34374378 | MS.gene056358:CDS | 35.0% |
| ! | CATTAGTGACTCTTTTCCAT+TGG | + | chr4.1:34374324-34374343 | MS.gene056358:CDS | 35.0% |
| ! | CTATGCAGAACTTTGTTTCA+AGG | + | chr4.1:34374512-34374531 | MS.gene056358:CDS | 35.0% |
| ! | GTATTGGTGATATGTGTCAA+TGG | - | chr4.1:34373763-34373782 | None:intergenic | 35.0% |
| ACTTGGCAATATTCTAGACC+AGG | - | chr4.1:34373999-34374018 | None:intergenic | 40.0% | |
| AGCCAAAATGGCTATGCAAA+TGG | + | chr4.1:34374588-34374607 | MS.gene056358:CDS | 40.0% | |
| CAAACAGATGGAAAGCTTAG+TGG | + | chr4.1:34374128-34374147 | MS.gene056358:intron | 40.0% | |
| CACTAAGCTTTCCATCTGTT+TGG | - | chr4.1:34374130-34374149 | None:intergenic | 40.0% | |
| CATACAGATTCTCCATATCC+TGG | + | chr4.1:34373978-34373997 | MS.gene056358:CDS | 40.0% | |
| GCATAACCTTAGTAGCGAAT+TGG | + | chr4.1:34374775-34374794 | MS.gene056358:CDS | 40.0% | |
| GCCAAAATGGCTATGCAAAT+GGG | + | chr4.1:34374589-34374608 | MS.gene056358:CDS | 40.0% | |
| GGATAATCTCCTGATGTTAG+TGG | - | chr4.1:34374981-34375000 | None:intergenic | 40.0% | |
| TGGTGATCGAGTCAAGTATT+GGG | + | chr4.1:34374539-34374558 | MS.gene056358:CDS | 40.0% | |
| TTGAATCCAAATTGTACCGG+AGG | + | chr4.1:34374642-34374661 | MS.gene056358:CDS | 40.0% | |
| TTTGGTCAATCCAGCATGTA+AGG | + | chr4.1:34375169-34375188 | MS.gene056358:CDS | 40.0% | |
| ! | GAATCTCAAAAGGGCGTAAT+AGG | + | chr4.1:34374753-34374772 | MS.gene056358:CDS | 40.0% |
| ! | TGGTAATGCGTCACCAAATA+GGG | - | chr4.1:34374684-34374703 | None:intergenic | 40.0% |
| ! | TTGGTGATCGAGTCAAGTAT+TGG | + | chr4.1:34374538-34374557 | MS.gene056358:CDS | 40.0% |
| !! | GGTCTAGCATTGGTTAACAA+TGG | - | chr4.1:34375131-34375150 | None:intergenic | 40.0% |
| !! | TTGGTAATGCGTCACCAAAT+AGG | - | chr4.1:34374685-34374704 | None:intergenic | 40.0% |
| AACCAACTAGAACAACGACC+CGG | - | chr4.1:34374624-34374643 | None:intergenic | 45.0% | |
| AAGTTTGAGGGAGATCCCAA+TGG | - | chr4.1:34374343-34374362 | None:intergenic | 45.0% | |
| ACAGATGGAAAGCTTAGTGG+TGG | + | chr4.1:34374131-34374150 | MS.gene056358:intron | 45.0% | |
| GAATCACCTCCGGTACAATT+TGG | - | chr4.1:34374651-34374670 | None:intergenic | 45.0% | |
| GGTTAACAATGGTGCATCAG+AGG | - | chr4.1:34375120-34375139 | None:intergenic | 45.0% | |
| ! | AGTGGTGGTGTCAATCAAGA+AGG | + | chr4.1:34374146-34374165 | MS.gene056358:CDS | 45.0% |
| ! | GCCCATTTGCATAGCCATTT+TGG | - | chr4.1:34374593-34374612 | None:intergenic | 45.0% |
| ! | GGGTTACTTTGAATGAGCCA+TGG | + | chr4.1:34374559-34374578 | MS.gene056358:CDS | 45.0% |
| ! | TCGGATTTGGAATCTGAGAG+TGG | - | chr4.1:34374807-34374826 | None:intergenic | 45.0% |
| ! | TTGCTCTTTCTGCGGCTTTT+TGG | - | chr4.1:34374830-34374849 | None:intergenic | 45.0% |
| !! | TCTTTCTGCGGCTTTTTGGT+CGG | - | chr4.1:34374826-34374845 | None:intergenic | 45.0% |
| !! | TGGATTGGTTCCTTACATGC+TGG | - | chr4.1:34375182-34375201 | None:intergenic | 45.0% |
| !! | ATTGATAAATATTTAAATTA+AGG | - | chr4.1:34374082-34374101 | None:intergenic | 5.0% |
| !! | TTGATAAATATTTAAATTAA+GGG | - | chr4.1:34374081-34374100 | None:intergenic | 5.0% |
| !!! | CATAATTAAATTTTTTTTTA+AGG | - | chr4.1:34373809-34373828 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTATTAAATTTT+TGG | - | chr4.1:34374938-34374957 | None:intergenic | 5.0% |
| !!! | TTTTTTAAGATAAATAAAAA+TGG | - | chr4.1:34374896-34374915 | None:intergenic | 5.0% |
| CCATGGAGCTACAGCCAAAA+TGG | + | chr4.1:34374576-34374595 | MS.gene056358:CDS | 50.0% | |
| CTTGTACACATCAACGGCTG+CGG | - | chr4.1:34374721-34374740 | None:intergenic | 50.0% | |
| TGGCTATGCAAATGGGCGAA+TGG | + | chr4.1:34374596-34374615 | MS.gene056358:CDS | 50.0% | |
| TGGTAACCTAGCACCAACGA+GGG | - | chr4.1:34375018-34375037 | None:intergenic | 50.0% | |
| TTCTGCGATCGAGCCCTATT+TGG | + | chr4.1:34374668-34374687 | MS.gene056358:CDS | 50.0% | |
| ! | AAAAGCATGAGAGCCCTCGT+TGG | + | chr4.1:34375002-34375021 | MS.gene056358:CDS | 50.0% |
| ! | AACGAGGGCTCTCATGCTTT+TGG | - | chr4.1:34375003-34375022 | None:intergenic | 50.0% |
| ! | ACGAGGGCTCTCATGCTTTT+GGG | - | chr4.1:34375002-34375021 | None:intergenic | 50.0% |
| ! | TTGGTAACCTAGCACCAACG+AGG | - | chr4.1:34375019-34375038 | None:intergenic | 50.0% |
| !! | TGCGGCTTTTTGGTCGGATT+TGG | - | chr4.1:34374820-34374839 | None:intergenic | 50.0% |
| !!! | CCATTTTGGCTGTAGCTCCA+TGG | - | chr4.1:34374579-34374598 | None:intergenic | 50.0% |
| CACCGGGTCGTTGTTCTAGT+TGG | + | chr4.1:34374619-34374638 | MS.gene056358:CDS | 55.0% | |
| CTCGATCGCAGAATCACCTC+CGG | - | chr4.1:34374661-34374680 | None:intergenic | 55.0% | |
| CTGCGGCATGTGCAAGAAGT+TGG | - | chr4.1:34374704-34374723 | None:intergenic | 55.0% | |
| TGCAAATGGGCGAATGGCAC+CGG | + | chr4.1:34374602-34374621 | MS.gene056358:CDS | 55.0% | |
| GCAAATGGGCGAATGGCACC+GGG | + | chr4.1:34374603-34374622 | MS.gene056358:CDS | 60.0% | |
| ! | TGAGAGCCCTCGTTGGTGCT+AGG | + | chr4.1:34375009-34375028 | MS.gene056358:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 34373732 | 34375217 | 34373732 | ID=MS.gene056358 |
| chr4.1 | mRNA | 34373732 | 34375217 | 34373732 | ID=MS.gene056358.t1;Parent=MS.gene056358 |
| chr4.1 | exon | 34373732 | 34373785 | 34373732 | ID=MS.gene056358.t1.exon1;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34373732 | 34373785 | 34373732 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| chr4.1 | exon | 34373941 | 34374016 | 34373941 | ID=MS.gene056358.t1.exon2;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34373941 | 34374016 | 34373941 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| chr4.1 | exon | 34374135 | 34374212 | 34374135 | ID=MS.gene056358.t1.exon3;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34374135 | 34374212 | 34374135 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| chr4.1 | exon | 34374315 | 34374402 | 34374315 | ID=MS.gene056358.t1.exon4;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34374315 | 34374402 | 34374315 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| chr4.1 | exon | 34374497 | 34374868 | 34374497 | ID=MS.gene056358.t1.exon5;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34374497 | 34374868 | 34374497 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| chr4.1 | exon | 34374968 | 34375217 | 34374968 | ID=MS.gene056358.t1.exon6;Parent=MS.gene056358.t1 |
| chr4.1 | CDS | 34374968 | 34375217 | 34374968 | ID=cds.MS.gene056358.t1;Parent=MS.gene056358.t1 |
| Gene Sequence |
| Protein sequence |
